These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8183#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2111 fasta sequence [GATACGATTTATACGACCACTATAGGAATTTGCCTCGAAGCCAAGAATCGGCACGAGGCGCGCTTCAGCGCCATCCATTTTCGGGGCTAGTTGATTCGTCAGGTGAGTTGTAACACACTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGTTCTAGGTTAGCGCGCAGTTCGGCACCGTAACCAGGCTTCCGGTTCATCCCGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACTTGGAGCTCCCGATTCCGTGGCGCGGCTCACCGGAGCAGCCGCGCCGTCCTACCTATTTAAAGTTTGAGAATAGGTCGAGGGCGTTGCGCCCCCGATGCCTCTAATCATTGGCTTTACCCGATAGAACTCGTAATGGGCTCCAGCTATCCTGAGGGAAACTTCGGAGGGAACCAGCTACTAGATGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTTCGAGCCTCCACCAGAGTTTCCTCTGGCTTCGCCCCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGCGTGCTCCAACTCGAACCCTTCACAGAAGATCAGGGTCGGCCAGCGGTGCGGCCCGTGAGGGCCTCCCGCTCGTCAGCTTCCTTGCGCACCCCAGGTCAGGCGGGACTACCCGCTGAGTTTAAGCATATAAATAAGCGGAGGAGAAGAAACTTACGAGGATTCCCCTAGTAAC-GCGAGCG-ACCGGGAGATGCCCAGCTTGAGAATCGGGCGGCCGCGCCGTCCGAATAGTAGTCTGGAGAGGCGTCCTCAGCGACGGACCGGGCCCAAGTCCCCTGGAAAGGGGCGCCTGGGAGGGTGAGAGCCCCGTCCGGCCCGGACCCTGTCGCCCCACGAGGCGCCGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAACTCCGTCCAAGGCTAAATACAGGCGAGAGACCGATAGCGAACAAGTACCGCGTGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTAAGCTTAGTTCACTTCACAGCCAGCGCCGACGAGGGGAGGAGCAGATCGGCTAGGGTTCCGGCGATGGCCTCCTCGGCGGCGGCGCGGCGGCGGCAGGAGATGGCGGCGGAGGGGCAGCGCCACCTGGAGGAGACCATCGCCGCCGCGTTCCAGATCCTCTCCTCCATGAACGACGAGCTCTGCAACCCCACGCTCTGGTCCTCCTCCTCCGCCGCCGCCGCCGCGGCGGGCGGCGCCGGCGGACTCCAGCACCACGGCAACAACCACCACCACCACCACCAGCACCACCACCACCACGGCGGTCTCCTCCGCCGCCGCCGCCGCTGCACTCCGCGGACTCCGACGCCGCCGACGCCGCCGGGGGAGGGCCCGGGGGCGCGCCGGGCTCCGGCGGGTCGCTCGACGAGGCCAGGCACCGGTACAAGGTCGCCATGGCGGCGCTCCGCACGTCCATCGCCGCCGTGTCGTCCTGTGCTCAGGAGATGGGATCGACAGA-ACACAAAGCTGATCAAGCTGAGATTGAGAGATTGGAAGAACATGCATCTGCTTTGAGAAAGGAAATTGAAAGCAAAAACAAGCATGTAAAGCTCCTTATCGACCAACTCCATGATTTAATATCGGACATATCAATGTGGCAGAGTCCTTGCTCAGTGTGAAAACTCATCGGCATTTATCCTTTAGGAATCCAAAAATCATAGCTAGAAGTATGTTAATGCAAAATTGTATCAGCTGACCTTGAGAGAGAAATCTGAAGGGAT-ACAATCAGTTTGCAAATACAATATTGTAATGATTTTTCTTTCAAGTATTCAGAAAGTGTACTATGAGTAGTGATAAACACGAAGTAGCTAGTAACTGAAACAAACATCTGGTGTATATTTTCCCACCAATTTGGCCTTGCTTTCATTTCCAA-GACTTCTGTATACTCTTTGAGCAACCATGACCTCTGTACACTTTTTCCTTTGTCGAGCATGATGATATTTGTGTCCTCACAAGCAATGGAAATAGTAATACATATGATTAATCTTAAAAAAAAAAAAA] [-] EMBL BU673423 [GATACGATTTATACGACCACTATAGGAATTTGCCTCGAAGCCAAGAATCGGCACGAGGCGCGCTTCAGCGCCATCCATTTTCGGGGCTAGTTGATTCGTCAGGTGAGTTGTAACACACTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGTTCTAGGTTAGCGCGCAGTTCGGCACCGTAACCAGGCTTCCGGTTCATCCCGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACTTGGAGCTCCCGATTCCGTGGCGCGGCTCACCGGAGCAGCCGCGCCGTCCTACCTATTTAAAGTTTGAGAATAGGTCGAGGGCGTTGCGCCCCCGATGCCTCTAATCATTGGCTTTACCCGATAGAACTCGTAATGGGCTCCAGCTATCCTGAGGGAAACTTCGGAGGGAACCAGCTACTAGATGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTTCGAGCCTCCACCAGAGTTTCCTCTGGCTTCGCCCCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGCGTGCTCCAACTCGAACCCTTCACAGAAGATCAGGGTCGGCCAGCGGTGCGGCCCGTGAGGGCCTCCCGCTCGTCAGCTTCCTTGCGCACCCCAGGTCAGGCGGGACTACCCGCTGAGTTTAAGCATATAAATAAGCGGAGGAGAAGAAACTTACGAGGATTCCCCTAGTAAC GCGAGCG ACCGGGAGATGCCCAGC ] [+] EMBL AK119958 [ GCGGAGGAGAAGAAACTTACGAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAGATGCCCAGCTTGAGAATCGGGCGGCCGCGCCGTCCGAATAGTAGTCTGGAGAGGCGTCCTCAGCGACGGACCGGGCCCAAGTCCCCTGGAAAGGGGCGCCTGGGAGGGTGAGAGCCCCGTCCGGCCCGGACCCTGTCGCCCCACGAGGCGCCGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAACTCCGTCCAAGGCTAAATACAGGCGAGAGACCGATAGCGAACAAGTACCGCGTGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTAAGCTTAGTTCACTTCACAGCCAGCGCCGACGAGGGGAGGAGCAGATCGGCTAGGGTTCCGGCGATGGCCTCCTCGGCGGCGGCGCGGCGGCGGCAGGAGATGGCGGCGGAGGGGCAGCGCCACCTGGAGGAGACCATCGCCGCCGCGTTCCAGATCCTCTCCTCCATGAACGACGAGCTCTGCAACCCCACGCTCTGGTCCTCCTCCTCCGCCGCCGCCGCCGCGGCGGGCGGCGCCGGCGGACTCCAGCACCACGGCAACAACCACCACCACCACCACCAGCACCACCACCACCACGGCGGTCTCCTCCGCCGCCGCCGCCGCTGCACTCCGCGGACTCCGACGCCGCCGACGCCGCCGGGGGAGGGCCCGGGGGCGCGCCGGGCTCCGGCGGGTCGCTCGACGAGGCCAGGCACCGGTACAAGGTCGCCATGGCGGCGCTCCGCACGTCCATCGCCGCCGTGTCGTCCTGTGCTCAGGAGATGGGATCGACAGA ACACAAAGCTGATCAAGCTGAGATTGAGAGATTGGAAGAACATGCATCTGCTTTGAGAAAGGAAATTGAAAGCAAAAACAAGCATGTAAAGCTCCTTATCGACCAACTCCATGATTTAATATCGGACATATCAATGTGGCAGAGTCCTTGCTCAGTGTGAAAACTCATCGGCATTTATCCTTTAGGAATCCAAAAATCATAGCTAGAAGTATGTTAATGCAAAATTGTATCAGCTGACCTTGAGAGAGAAATCTGAAGGGAT ACAATCAGTTTGCAAATACAATATTGTAATGATTTTTCTTTCAAGTATTCAGAAAGTGTACTATGAGTAGTGATAAACACGAAGTAGCTAGTAACTGAAACAAACATCTGGTGTATATTTTCCCACCAATTTGGCCTTGCTTTCATTTCCAA GACTTCTGTATACTCTTTGAGCAACCATGACC ] [+] EMBL CA762684 [ GGACTCCGACGCCGCCGACGCCGCCGGGGGAGGGCCCGGGGGCGCGCCGGGCTCCGGCGGGTCGCTCGACGAGGCCAGGCACCGGTACAAGGTCGCCATGGCGGCGCTCCGCACGTCCATCGCCGCCGTGTCGTCCTGTGCTCAGGAGATGGGATCGACAGA ACACAAAGCTGATCAAGCTGAGATTGAGAGATTGGAAGAACATGCATCTGCTTTGAGAAAGGAAATTGAAAGCAAAAACAAGCATGTAAAGCTCCTTATCGACCAACTCCATGATTTAATATCGGACATATCAATGTGGCAGAGTCCTTGCTCAGTGTGAAAACTCATCGGCATTTATCCTTTAGGAATCCAAAAATCATAGCTAGAAGTATGTTAATGCAAAATTGTATCAGCTGACCTTGAGAGAGGAATCTGAAGGGAT ACAATCAGTTTGCAAATACAATATTGTAATGACTTTTCTTTCAAGTATTCAGAAAGTGTACTATGAGTAGTGATAAACACGAAGTAGCTAGTAACTGAAACAAACATCTGGTGTATATTTTCCCACCAATTTGGCCTTGCTTTCATTTCCAA GACTTCTGTATACTCTTTGAGCAACCATGACCTCTGTACACTTTTTCCTTTGTCGAGCATGATGATATTTGTGTCCTCACAAGCAATGGAAATAGTAATACATATGATTAATCTTAAAAAAAAAAAAA] [+] EMBL CA999009 [ AGGCCAGGCACCGGTACAAGGTCGCCATGGCGGCGCTCCGCACGTCCATCGCCGCCGTGTCGTCCTGTGCTCAGGAGATGGGATCGACAGA ACACAAAGCTGATCAAGCTGAGATTGAGAGATTGGAAGAACATGCATCTGCTTTGAGAAAGGAAATTGAAAGCAAAAACAAGCATGTAAAGCTCCTTATCGACCAACTCCATGATTTAATATCGGACATATCAATGTGGCAGAGTCCTTGCTCAGTGTGAAAACTC ] [+] EMBL BM038378 [ CCATC CC CCGTGTCGTCCTGTGCTCAGGAGATGGGATCGACAGATACAC AAGCTGATCAAGCTGAGATTGAGAGATTGGAAGAACATGCATCTGCTTTGAGAAAGGAAATTGAAAGCAAAAACAAGCATGTAAAGCTCCTTATCGACCAACTCCATGATTTAATATCGGACATATCAATGTGGCAGAGTCCTTGCTCAGTGTGAAAACTCATCGGCATTTATCCTTTAGGAATCCAAAAATCATAGCTAGAAGTATGTTAATGC AAATTGTATCAGCTGACCTTGAGAGAGAAATCTGAAGGGATCACCATCNGTTTGCAAATAC ATATTGTAATGATTTTTCTTTCAAGTATTCAGAAAGTGTACTATGAGTAGTGATAAACACGAAGTAGCTAGTAACTGAAAC AACATCTGGTGTATATTTTCCCACC ATTT GCCTTGCTTTCATTTCCAACGACTTCTGTATACTCTTTGA CAACCAaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||