Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 8209 cluster # 8209       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8209#0 length = 2136 sequences # 1  
consensus_8209#1 length = 612 sequences # 4  

consensusID : consensus_8209#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2136
fasta sequence
                              [TGATACGCCGGTAAGCAAGCAAAAAAGTCGATCATGCAACTACCCGAGGGAGGCATTACATCGAACAGTTGGCGGGCACCGTCCTCGTCGCCACCGGGGGAGGGAGAGGGAGAGCATGAGCAGCCGAGAAAGCGACGACGCAGGAGCGGGAGCGTGGTCGGAGCCCCGAGCTCCGCCGCCCAGATACGAGGAGGAGCCCCGCCGCCGCAGCCTCCGGGCCTGCAGTGGGGAAGGCGACGCGACGGGGCGTGAGCTGCCGCTGCCCCGGCGGCCAAGAGCATCTCGCAACTGAAGTGGCGCGCGCGCGTGAACCGCTCGTCTCTGAAGTCTAATCCTTCATGTCGCTGCTGCCAAAGCTTTCCTAGGGGACAGAAGATCCTGCAATATTTGTGATGCTTTGTCTGAAGAACTCTTCAACTTCTGCGGCATCCTCAGGAAGTGGCATCTCATCCATCAGCAGCTTGACAGCAAATGTGATACACATGTCCCATTCGGACGGCTCTCCGTATATCGATGCTAGGGCTGCTTCTGCACCTGAAACACCTGAAACAAGAAAATTTTTACCAGGACTGTTTTGATCCAGAGCTGAAGTTGTTCAGTGTAAAGCTTACCATTGTCTGCTTTGTTCTCCATAGGATTGGTGGCACCAGTGGCATGCTGATCAAGAGCACTGGCAGCTGCACCATTGCTGTCCTTGAGGCCAGCTCCAGCATCATCAGCTATCAAGGCATCCTCCTGCTTAAATGCATCTGCACCTGAAAGTTTCTTGTCCATTGGAGTATTGAGAGTTGGCACACCGTCCTTCTGGTTTGTATTTTCACTAGTGCTGTTCTTCACCTCAGCTGAGGTATCAATCACTCGGACACCAGTCTTCTCAGTAACATCGTTACCGGTGCCGGTTTTCGCCTCTCCCTTGGAAGCTGTCTTCTTCCTCTTCCTTGAATAAACAGCCTGTTCATTACCATTCCTGTTCTTCCCAGTTTCAAATTTCTGGAGCTCATCCTGTGATGTCCACAATGCAGGCTCTTTTACCCTGTGGCGCGCCGAACGTTTACCGCGTGTTTTTGGGTCTATGCGTTCAGTGATCTCTGTTTTTATTTCTAGAAGTTTGTATTTAGTATCTTCACCATTGTTGTCCTTTAATTTAGGTGCCGTTTCAGATGCACTGCTTGACATGCTGTCTCTTTCAGTTGATTTCATCATCTTTGAGCCAACACTCCGATCATTCACATATTTTCTTATATTCCTTACAGAGTTCAGAAGCCCCTGAAGTGGTGCCCAAGGTGTATGATTCCTTCCCCTTGGGCGGTCCGAACGCTTTCCATGAATCTTGGGAAGCATAGGTTCAGAATCTCCTGATGATCCTGACAAAAAGTAAACTACATTCAATTCATTGACATTGAAACAGGGTTGTTGAGATATGCATCCAAATTACAAATTACTAATATCAAGGGGGGAAGTAAATACAACAGTACTGACAGAATTCAACTGATTTTTAACATGAATTCATTGCCCTTCTGCTTGGTAAACTAAGATAAACTGTTACTTTCAAAGGGGGAAGAGGTGCAGGCAAATGAATGACATATGAAAAGATTTCCCTTTTGGCATGATCTTCCTTTTGAGAAATTATTTCCCTCTAGTGTTTCTTCTGGTTATTCCTAAAACATAAATTAGATAGCTTTTCAGCACAATACCAAAGTAAATTAGAGTGGATAACTCATTAAAAAATACCTTAAAAACAAGAATGAACTAGTAGTGAAGAATATAGAAATGCAAGACACTGATCATCCAATAGAATTTCAAGGAATGGAAAGATGGATTAACACGCATCCAAAACTTTTCTATATATGAATTTCTTATTATGTTGTTTTAAATCTATTTTCTAACTTCATAATATTTAATCCGTTAGCTTGTACCCTCAAATAATCATCACAAATCATTCAGTTATTCAGCCATTCAGCACAGAAGAACAGGAGAATGCACAGCTTGGTATTTAGCACTATGAAATATATTGATTAATAATCAATAGTTTTAGTTGGAGATAACTGCTATTTAACAACCTATGTAAGGCATATTCTATTTGGCAGAAATTTTTCACGTTTTCCTACTGGAATTAAACTGTTTCTTGTAAAGTTC]

[+] EMBL AK069961             [TGATACGCCGGTAAGCAAGCAAAAAAGTCGATCATGCAACTACCCGAGGGAGGCATTACATCGAACAGTTGGCGGGCACCGTCCTCGTCGCCACCGGGGGAGGGAGAGGGAGAGCATGAGCAGCCGAGAAAGCGACGACGCAGGAGCGGGAGCGTGGTCGGAGCCCCGAGCTCCGCCGCCCAGATACGAGGAGGAGCCCCGCCGCCGCAGCCTCCGGGCCTGCAGTGGGGAAGGCGACGCGACGGGGCGTGAGCTGCCGCTGCCCCGGCGGCCAAGAGCATCTCGCAACTGAAGTGGCGCGCGCGCGTGAACCGCTCGTCTCTGAAGTCTAATCCTTCATGTCGCTGCTGCCAAAGCTTTCCTAGGGGACAGAAGATCCTGCAATATTTGTGATGCTTTGTCTGAAGAACTCTTCAACTTCTGCGGCATCCTCAGGAAGTGGCATCTCATCCATCAGCAGCTTGACAGCAAATGTGATACACATGTCCCATTCGGACGGCTCTCCGTATATCGATGCTAGGGCTGCTTCTGCACCTGAAACACCTGAAACAAGAAAATTTTTACCAGGACTGTTTTGATCCAGAGCTGAAGTTGTTCAGTGTAAAGCTTACCATTGTCTGCTTTGTTCTCCATAGGATTGGTGGCACCAGTGGCATGCTGATCAAGAGCACTGGCAGCTGCACCATTGCTGTCCTTGAGGCCAGCTCCAGCATCATCAGCTATCAAGGCATCCTCCTGCTTAAATGCATCTGCACCTGAAAGTTTCTTGTCCATTGGAGTATTGAGAGTTGGCACACCGTCCTTCTGGTTTGTATTTTCACTAGTGCTGTTCTTCACCTCAGCTGAGGTATCAATCACTCGGACACCAGTCTTCTCAGTAACATCGTTACCGGTGCCGGTTTTCGCCTCTCCCTTGGAAGCTGTCTTCTTCCTCTTCCTTGAATAAACAGCCTGTTCATTACCATTCCTGTTCTTCCCAGTTTCAAATTTCTGGAGCTCATCCTGTGATGTCCACAATGCAGGCTCTTTTACCCTGTGGCGCGCCGAACGTTTACCGCGTGTTTTTGGGTCTATGCGTTCAGTGATCTCTGTTTTTATTTCTAGAAGTTTGTATTTAGTATCTTCACCATTGTTGTCCTTTAATTTAGGTGCCGTTTCAGATGCACTGCTTGACATGCTGTCTCTTTCAGTTGATTTCATCATCTTTGAGCCAACACTCCGATCATTCACATATTTTCTTATATTCCTTACAGAGTTCAGAAGCCCCTGAAGTGGTGCCCAAGGTGTATGATTCCTTCCCCTTGGGCGGTCCGAACGCTTTCCATGAATCTTGGGAAGCATAGGTTCAGAATCTCCTGATGATCCTGACAAAAAGTAAACTACATTCAATTCATTGACATTGAAACAGGGTTGTTGAGATATGCATCCAAATTACAAATTACTAATATCAAGGGGGGAAGTAAATACAACAGTACTGACAGAATTCAACTGATTTTTAACATGAATTCATTGCCCTTCTGCTTGGTAAACTAAGATAAACTGTTACTTTCAAAGGGGGAAGAGGTGCAGGCAAATGAATGACATATGAAAAGATTTCCCTTTTGGCATGATCTTCCTTTTGAGAAATTATTTCCCTCTAGTGTTTCTTCTGGTTATTCCTAAAACATAAATTAGATAGCTTTTCAGCACAATACCAAAGTAAATTAGAGTGGATAACTCATTAAAAAATACCTTAAAAACAAGAATGAACTAGTAGTGAAGAATATAGAAATGCAAGACACTGATCATCCAATAGAATTTCAAGGAATGGAAAGATGGATTAACACGCATCCAAAACTTTTCTATATATGAATTTCTTATTATGTTGTTTTAAATCTATTTTCTAACTTCATAATATTTAATCCGTTAGCTTGTACCCTCAAATAATCATCACAAATCATTCAGTTATTCAGCCATTCAGCACAGAAGAACAGGAGAATGCACAGCTTGGTATTTAGCACTATGAAATATATTGATTAATAATCAATAGTTTTAGTTGGAGATAACTGCTATTTAACAACCTATGTAAGGCATATTCTATTTGGCAGAAATTTTTCACGTTTTCCTACTGGAATTAAACTGTTTCTTGTAAAGTTC]


>consensus_8209#0 TGATACGCCGGTAAGCAAGCAAAAAAGTCGATCATGCAACTACCCGAGGGAGGCATTACA TCGAACAGTTGGCGGGCACCGTCCTCGTCGCCACCGGGGGAGGGAGAGGGAGAGCATGAG CAGCCGAGAAAGCGACGACGCAGGAGCGGGAGCGTGGTCGGAGCCCCGAGCTCCGCCGCC CAGATACGAGGAGGAGCCCCGCCGCCGCAGCCTCCGGGCCTGCAGTGGGGAAGGCGACGC GACGGGGCGTGAGCTGCCGCTGCCCCGGCGGCCAAGAGCATCTCGCAACTGAAGTGGCGC GCGCGCGTGAACCGCTCGTCTCTGAAGTCTAATCCTTCATGTCGCTGCTGCCAAAGCTTT CCTAGGGGACAGAAGATCCTGCAATATTTGTGATGCTTTGTCTGAAGAACTCTTCAACTT CTGCGGCATCCTCAGGAAGTGGCATCTCATCCATCAGCAGCTTGACAGCAAATGTGATAC ACATGTCCCATTCGGACGGCTCTCCGTATATCGATGCTAGGGCTGCTTCTGCACCTGAAA CACCTGAAACAAGAAAATTTTTACCAGGACTGTTTTGATCCAGAGCTGAAGTTGTTCAGT GTAAAGCTTACCATTGTCTGCTTTGTTCTCCATAGGATTGGTGGCACCAGTGGCATGCTG ATCAAGAGCACTGGCAGCTGCACCATTGCTGTCCTTGAGGCCAGCTCCAGCATCATCAGC TATCAAGGCATCCTCCTGCTTAAATGCATCTGCACCTGAAAGTTTCTTGTCCATTGGAGT ATTGAGAGTTGGCACACCGTCCTTCTGGTTTGTATTTTCACTAGTGCTGTTCTTCACCTC AGCTGAGGTATCAATCACTCGGACACCAGTCTTCTCAGTAACATCGTTACCGGTGCCGGT TTTCGCCTCTCCCTTGGAAGCTGTCTTCTTCCTCTTCCTTGAATAAACAGCCTGTTCATT ACCATTCCTGTTCTTCCCAGTTTCAAATTTCTGGAGCTCATCCTGTGATGTCCACAATGC AGGCTCTTTTACCCTGTGGCGCGCCGAACGTTTACCGCGTGTTTTTGGGTCTATGCGTTC AGTGATCTCTGTTTTTATTTCTAGAAGTTTGTATTTAGTATCTTCACCATTGTTGTCCTT TAATTTAGGTGCCGTTTCAGATGCACTGCTTGACATGCTGTCTCTTTCAGTTGATTTCAT CATCTTTGAGCCAACACTCCGATCATTCACATATTTTCTTATATTCCTTACAGAGTTCAG AAGCCCCTGAAGTGGTGCCCAAGGTGTATGATTCCTTCCCCTTGGGCGGTCCGAACGCTT TCCATGAATCTTGGGAAGCATAGGTTCAGAATCTCCTGATGATCCTGACAAAAAGTAAAC TACATTCAATTCATTGACATTGAAACAGGGTTGTTGAGATATGCATCCAAATTACAAATT ACTAATATCAAGGGGGGAAGTAAATACAACAGTACTGACAGAATTCAACTGATTTTTAAC ATGAATTCATTGCCCTTCTGCTTGGTAAACTAAGATAAACTGTTACTTTCAAAGGGGGAA GAGGTGCAGGCAAATGAATGACATATGAAAAGATTTCCCTTTTGGCATGATCTTCCTTTT GAGAAATTATTTCCCTCTAGTGTTTCTTCTGGTTATTCCTAAAACATAAATTAGATAGCT TTTCAGCACAATACCAAAGTAAATTAGAGTGGATAACTCATTAAAAAATACCTTAAAAAC AAGAATGAACTAGTAGTGAAGAATATAGAAATGCAAGACACTGATCATCCAATAGAATTT CAAGGAATGGAAAGATGGATTAACACGCATCCAAAACTTTTCTATATATGAATTTCTTAT TATGTTGTTTTAAATCTATTTTCTAACTTCATAATATTTAATCCGTTAGCTTGTACCCTC AAATAATCATCACAAATCATTCAGTTATTCAGCCATTCAGCACAGAAGAACAGGAGAATG CACAGCTTGGTATTTAGCACTATGAAATATATTGATTAATAATCAATAGTTTTAGTTGGA GATAACTGCTATTTAACAACCTATGTAAGGCATATTCTATTTGGCAGAAATTTTTCACGT TTTCCTACTGGAATTAAACTGTTTCTTGTAAAGTTC



consensusID : consensus_8209#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 612
fasta sequence
                              [TTTTTGGACCAAAACCAAACCAATTTCAGATGAAGAGGGGAGTGAAATGGTGTCTCGAACCTCACAGAAATGGGCGAAATTCGCCCAAATTCGGACCTTTCAGTCCAAATCCCAGAACCGTTAAGAAAACAGGAAAGTTCACCGCAATAAACATACTCAAGACATTTACCACAAAGGGACAATCTGTTCTCCCACAAGGTACCGCATCAATCCATCACACAAATTAACAAACATCACAGGCAAATTATCTCCTTTCAAATCTACTACAGATGCCAAGTGCATCTTATTAAGTTTTCCCAGCTAATTTGTTTTAGAAGTAATTTCTCCCAGCTAATTAAGCAGATATGAGTTGCATCTCCACTTCATCCTGTAATTTCTTGCAGCTTTCCTAGGGGACAGAAGATCCTGCAATA-TTTGTGATGC-T--TGTCTGAAGAACTCTTCAACTTCTGCGGCATCCTCAGGAAGTGGCATCTCATCCATCAGCAGCTTGACAGCAAATGTGATACACATGTCCCATTCGGACGG-TCTCCGTATATCGATGCTAGGGCTGCTTCTG-ACCTGAAACACCATTGTCTGCTTTGTCTCCATAGGATTGGTGGCACCAGTGGCATG]

[-] EMBL BI804313             [TTTTTGGACCAAAACCAAACCAATTTCAGATGAAGAGGGGAGTGAAATGGTGTCTCGAACCTCACAGAAATGGGCGAAATTCGCCCAAATTCGGACCTTTCAGTCCAAATCCCAGAACCGTTAAGAAAACAGGAAAGTTCACCGCAATAAACATACTCAAGACATTTACCACAAAGGGACAATCTGTTCTCCCACAAGGTACCGCATCAATCCATCACACAAATTAACAAACATCACAGGCAAATTATCTCCTTTCAAATCTACTACAGATGCCAAGTGCATCTTATTAAGTTTTCCCAGCTAATTTGTTTTAGAAGTAATTTCTCCCAGCTAATTAAGCAGATATGAGTTGCATCTCCACTTCATCCTGTAATTTCTTGCAGCTTTCCTAGGGGACAGAAGATCCTGCAATA TTTGTGATGC T  TGTCTGAAGAACTCTTCAACTTCTGCGGCATCCTCAGGAAGTGGGATCTCATCCATCAGCAGCTTGACAGCAAATGTGATACACATGTCCCATTCGGACGG TCTCCGTATATCGATGCTAGGGCTG TTCTG ACCTGAA                                                 ]
[-] EMBL BI804529             [ TTTTTGACCAAAACCAAACCAATTTCAGATGAA ATGGGAGTGAAATGGTGTCTCGAACCTCACAGAAATGGGCGAAATTCGCCCAAATTCGGACCTTTCAGTCCAAATCCCAGAACCGTTAAGAAAACAGGAAAGTTCACCGCAATAAACATACTCAAGACATTTACCACAAAGGGACAATCTGTTCTCCCACAAGGTACCGCATCAATCCATCACACAAATTAACAAACATCACAGGCAAATTATCTCCTTTCAAATCTACTACAGATGCCAAGTGCATCTTATTAAGTTTTCCCAGCTAATTTGTTTTAGAAGTAATTTCTCCCAGCTAATTAAGCAGATATGAGTTGCATCTCCACTTCATCCTGTAATTTCTTGCAGCTTTCCTAGGGGACAGAAGATCCTGCAATA TTTGTGATGC T  TGTCTGAAGAACTCTTCAACTTCTGCGGCATCCTCAGGAAGTGGCATCTCATCCATCAGCAGCTTGACAGCAAATGTGATACACATGTCCCATTCGGACGG TCTCCGTATATCGATGCTAGGGCTGGTTCTG ACCTGAAACACCATTGTC                                      ]
[-] EMBL CA766962             [                                                                 AGAAATGGGCGAAATTCGCCCAAATTCGGACCTTTCAGTCCAAATCCCAGAACCGTTAAGAAAACAGGAAAGTTCACCGCAATAAACATACTCAAGACATTTACCACAAAGGGACAATCTGTTCTCCCACAAGGTACCGCACCAATCCATCACACAAATTAACAAACATCACAGGCAAATTATCTCCTTTCAAATCTACTACAGATGCCAAGTGCATCTTATTAAGTTTTCCCAGCTAATTTGTTTTAGAAGTAATTTCTCCCAGCTAATTAAGCAGATATGAGTTGCATCTCCACTTCATCCTGTAATTTCTTGCAGCTTTCCTAGGGGACAGAAGATCCTGCAATA TTTGTGATGCTT  TGTCTGAAGAACTCTTCAACTTCTGCGGCATCCTCAGGAAGTGGCATCTCATCCATCAGCAGCTTGACAGCAAATGTGATACACATGTCCCATTCGGACGGCTCTCCGTATATCGATGCTAGGGCTGCTTCTGCACCTGAAACACCATTGTCTGCTTTG                               ]
[-] EMBL BI801693             [                                                                                                                                     ttttTTCACCGCAATAAACATACTCAAGACATTTACCACAAAGGGACAATCTGTTCTCCCACAAGGTACCG ATCAATCCATCACACAAATTAACAAACATCACAGGCAAATTATCTCCTTTCAAATCTACTACAGATGCCAAGTGCATCTTATTAAGTTTTCCCAGCTAATTGGTTTTAGAAGTAATTTCTCCCAGCTAATTAAGCAGATATGAGTTGCATCTCCACTTCATCCTGTAATTTCTTGCAGCTTTCCTAGGGGACAGAAGATCCTGCAATATTTTGTGATGC TTGTGTCTGAAGAACTCTTCAACTTCTGCGGCATCCTCAGGAAGTGGCATCTCATCCATCAGCAGCTTGACAGCAAATGTGATACACATGTCCCATTCGGACGG TCTCCGTATATCGATGCTAGGGCTGCTTCTGCACCTGAAACACCATTGTCTGCTTGTTCTCCATAGGATTGGTGGCACCAGTGGCATG]


>consensus_8209#1 TTTTTGGACCAAAACCAAACCAATTTCAGATGAAGAGGGGAGTGAAATGGTGTCTCGAAC CTCACAGAAATGGGCGAAATTCGCCCAAATTCGGACCTTTCAGTCCAAATCCCAGAACCG TTAAGAAAACAGGAAAGTTCACCGCAATAAACATACTCAAGACATTTACCACAAAGGGAC AATCTGTTCTCCCACAAGGTACCGCATCAATCCATCACACAAATTAACAAACATCACAGG CAAATTATCTCCTTTCAAATCTACTACAGATGCCAAGTGCATCTTATTAAGTTTTCCCAG CTAATTTGTTTTAGAAGTAATTTCTCCCAGCTAATTAAGCAGATATGAGTTGCATCTCCA CTTCATCCTGTAATTTCTTGCAGCTTTCCTAGGGGACAGAAGATCCTGCAATATTTGTGA TGCTTGTCTGAAGAACTCTTCAACTTCTGCGGCATCCTCAGGAAGTGGCATCTCATCCAT CAGCAGCTTGACAGCAAATGTGATACACATGTCCCATTCGGACGGTCTCCGTATATCGAT GCTAGGGCTGCTTCTGACCTGAAACACCATTGTCTGCTTTGTCTCCATAGGATTGGTGGC ACCAGTGGCATG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8209#0      -----------------------TGATACGCCGGTAAGCAAGCAAAAAAGTCGATCATGC 37
consensus_8209#1      TTTTTGGACCAAAACCAAACCAATTTCAGATGAAGAGGGGAGTGAAATGGTGTCTCGAAC 60
                                             *   *       * *  **  ***  **   **   *

consensus_8209#0      AACTACCCGAGGGAGGCATTACATCGAACAGTTGGCGGGCACCGTCCTCGTCGCC--ACC 95
consensus_8209#1      CTCACAGAAATGGGCGAAATTCGCCCAA-ATTCGGACCTTTCAGTCCAAATCCCAGAACC 119
                        *      * **  * * * *  * ** * * **      * ****   ** *   ***

consensus_8209#0      GGGGGAGGGAGAGGGAGAGCATGAGCAGCCGAGAAAGCGACGACGCAGGA-GCGGGAGCG 154
consensus_8209#1      GTTAAGAAAACAGGAAAGTTCACCGCAATAAACATACTCAAGACATTTACCACAAAGGGA 179
                      *        * *** *        ***    * * *   * ***        *    *  

consensus_8209#0      TGGTCGGAGCCCCGA-GCTCCGCCGCCCAGATACGAGGAGGAGCCCCGCCGCCGCAGCCT 213
consensus_8209#1      CAATCTGTTCTCCCACAAGGTACCGCATCAATCCATCACACAAATTAACAAACATCACAG 239
                         ** *  * ** *       ****    ** *       *      *   *    *  

consensus_8209#0      CCGGGCCTGCAGTGGGGAAGGCGACGCGACGGGGCGTGAGCTGCCGCTGCCCCGGCGGCC 273
consensus_8209#1      GCAAATTATCTCCTTTCAAATCTACTACA---GATGCCAAGTGCATCTTATTAAGTTTTC 296
                       *       *       **  * **   *   *  *  *  ***  **      *    *

consensus_8209#0      AAGAGCATCTCGCAACTGAAGTGGCGCGCGCGCGTGAACCGCTCGTCTCTGAAGTCTAAT 333
consensus_8209#1      CCAGCTAATTTGTTTTAGAAGTAATTTCTCCCAGCTAATTAAGCAGATATGAGTTGCATC 356
                            *  * *     *****        *  *  **     *   * ***  *  *  

consensus_8209#0      CC---TTCATGTCGCTGCTGCCAA-AGCTTTCCTAGGGGACAGAAGATCCTGCAATATTT 389
consensus_8209#1      TCCACTTCATCCTGTAATTTCTTGCAGCTTTCCTAGGGGACAGAAGATCCTGCAATATTT 416
                       *   *****   *    * *    ***********************************

consensus_8209#0      GTGATGCTTTGTCTGAAGAACTCTTCAACTTCTGCGGCATCCTCAGGAAGTGGCATCTCA 449
consensus_8209#1      GTGATGCTT-GTCTGAAGAACTCTTCAACTTCTGCGGCATCCTCAGGAAGTGGCATCTCA 475
                      ********* **************************************************

consensus_8209#0      TCCATCAGCAGCTTGACAGCAAATGTGATACACATGTCCCATTCGGACGGCTCTCCGTAT 509
consensus_8209#1      TCCATCAGCAGCTTGACAGCAAATGTGATACACATGTCCCATTCGGACGG-TCTCCGTAT 534
                      ************************************************** *********

consensus_8209#0      ATCGATGCTAGGGCTGCTTCTGCACCTGAAACACCTGAAACAAGAAAATTTTTACCAGGA 569
consensus_8209#1      ATCGATGCTAGGGCTGCTTCTG-ACCTGAAACACCATTGTCTGCTTTGTCTCCAT-AGGA 592
                      ********************** ************     *       * *  *  ****

consensus_8209#0      CTGTTTTGATCCAGAGCTGAAGTTGTTCAGTGTAAAGCTTACCATTGTCTGCTTTGTTCT 629
consensus_8209#1      TTGGTGGCACCAGTGGCATG---------------------------------------- 612
                       ** *   * *    **                                           

consensus_8209#0      CCATAGGATTGGTGGCACCAGTGGCATGCTGATCAAGAGCACTGGCAGCTGCACCATTGC 689
consensus_8209#1      ------------------------------------------------------------
                                                                                  

consensus_8209#0      TGTCCTTGAGGCCAGCTCCAGCATCATCAGCTATCAAGGCATCCTCCTGCTTAAATGCAT 749
consensus_8209#1      ------------------------------------------------------------
                                                                                  

consensus_8209#0      CTGCACCTGAAAGTTTCTTGTCCATTGGAGTATTGAGAGTTGGCACACCGTCCTTCTGGT 809
consensus_8209#1      ------------------------------------------------------------
                                                                                  

consensus_8209#0      TTGTATTTTCACTAGTGCTGTTCTTCACCTCAGCTGAGGTATCAATCACTCGGACACCAG 869
consensus_8209#1      ------------------------------------------------------------
                                                                                  

consensus_8209#0      TCTTCTCAGTAACATCGTTACCGGTGCCGGTTTTCGCCTCTCCCTTGGAAGCTGTCTTCT 929
consensus_8209#1      ------------------------------------------------------------
                                                                                  

consensus_8209#0      TCCTCTTCCTTGAATAAACAGCCTGTTCATTACCATTCCTGTTCTTCCCAGTTTCAAATT 989
consensus_8209#1      ------------------------------------------------------------
                                                                                  

consensus_8209#0      TCTGGAGCTCATCCTGTGATGTCCACAATGCAGGCTCTTTTACCCTGTGGCGCGCCGAAC 1049
consensus_8209#1      ------------------------------------------------------------
                                                                                  

consensus_8209#0      GTTTACCGCGTGTTTTTGGGTCTATGCGTTCAGTGATCTCTGTTTTTATTTCTAGAAGTT 1109
consensus_8209#1      ------------------------------------------------------------
                                                                                  

consensus_8209#0      TGTATTTAGTATCTTCACCATTGTTGTCCTTTAATTTAGGTGCCGTTTCAGATGCACTGC 1169
consensus_8209#1      ------------------------------------------------------------
                                                                                  

consensus_8209#0      TTGACATGCTGTCTCTTTCAGTTGATTTCATCATCTTTGAGCCAACACTCCGATCATTCA 1229
consensus_8209#1      ------------------------------------------------------------
                                                                                  

consensus_8209#0      CATATTTTCTTATATTCCTTACAGAGTTCAGAAGCCCCTGAAGTGGTGCCCAAGGTGTAT 1289
consensus_8209#1      ------------------------------------------------------------
                                                                                  

consensus_8209#0      GATTCCTTCCCCTTGGGCGGTCCGAACGCTTTCCATGAATCTTGGGAAGCATAGGTTCAG 1349
consensus_8209#1      ------------------------------------------------------------
                                                                                  

consensus_8209#0      AATCTCCTGATGATCCTGACAAAAAGTAAACTACATTCAATTCATTGACATTGAAACAGG 1409
consensus_8209#1      ------------------------------------------------------------
                                                                                  

consensus_8209#0      GTTGTTGAGATATGCATCCAAATTACAAATTACTAATATCAAGGGGGGAAGTAAATACAA 1469
consensus_8209#1      ------------------------------------------------------------
                                                                                  

consensus_8209#0      CAGTACTGACAGAATTCAACTGATTTTTAACATGAATTCATTGCCCTTCTGCTTGGTAAA 1529
consensus_8209#1      ------------------------------------------------------------
                                                                                  

consensus_8209#0      CTAAGATAAACTGTTACTTTCAAAGGGGGAAGAGGTGCAGGCAAATGAATGACATATGAA 1589
consensus_8209#1      ------------------------------------------------------------
                                                                                  

consensus_8209#0      AAGATTTCCCTTTTGGCATGATCTTCCTTTTGAGAAATTATTTCCCTCTAGTGTTTCTTC 1649
consensus_8209#1      ------------------------------------------------------------
                                                                                  

consensus_8209#0      TGGTTATTCCTAAAACATAAATTAGATAGCTTTTCAGCACAATACCAAAGTAAATTAGAG 1709
consensus_8209#1      ------------------------------------------------------------
                                                                                  

consensus_8209#0      TGGATAACTCATTAAAAAATACCTTAAAAACAAGAATGAACTAGTAGTGAAGAATATAGA 1769
consensus_8209#1      ------------------------------------------------------------
                                                                                  

consensus_8209#0      AATGCAAGACACTGATCATCCAATAGAATTTCAAGGAATGGAAAGATGGATTAACACGCA 1829
consensus_8209#1      ------------------------------------------------------------
                                                                                  

consensus_8209#0      TCCAAAACTTTTCTATATATGAATTTCTTATTATGTTGTTTTAAATCTATTTTCTAACTT 1889
consensus_8209#1      ------------------------------------------------------------
                                                                                  

consensus_8209#0      CATAATATTTAATCCGTTAGCTTGTACCCTCAAATAATCATCACAAATCATTCAGTTATT 1949
consensus_8209#1      ------------------------------------------------------------
                                                                                  

consensus_8209#0      CAGCCATTCAGCACAGAAGAACAGGAGAATGCACAGCTTGGTATTTAGCACTATGAAATA 2009
consensus_8209#1      ------------------------------------------------------------
                                                                                  

consensus_8209#0      TATTGATTAATAATCAATAGTTTTAGTTGGAGATAACTGCTATTTAACAACCTATGTAAG 2069
consensus_8209#1      ------------------------------------------------------------
                                                                                  

consensus_8209#0      GCATATTCTATTTGGCAGAAATTTTTCACGTTTTCCTACTGGAATTAAACTGTTTCTTGT 2129
consensus_8209#1      ------------------------------------------------------------
                                                                                  

consensus_8209#0      AAAGTTC 2136
consensus_8209#1      -------
                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)