These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8231#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2624 fasta sequence [AAGTTTCAACCTCCCTTCTCCAACTTGCAATGTCTTCATCTCACACGGTGACAGTCTCCATGGATGTTGAAGCCGGACAGAAAAACAAAGATAAGAAGGGGATCAGCCAAGATCTGATCCTGGCTTACAAGACTCTTGGTGTTGTTTTCGGTGGCCTTGTTACCTCACCACTCTACGTCTACCCATCCATGAATTTGACGAATCCTACTGAAGAAGACTACCTGGGAATATACAGCATCATGTTCTGGACCCTCACTCTCATTGGCGTAGTCAAGTACATATGCATCGCTCTCAACGCTGACGACCACGGCGAAGGTGGCACATTTGCCATGTATTCTCTGCTCTGTCAGCACGCAAACATTGGGATCCTTCCATCCAAGAAGATCTACACTGAAGAAGAGAACCTGATCTCGAATCAGCCTGTCGTAGCTGGAAGGCCTGGAAGACTGAGAAGGTTCATCGAAAGCAGCATAATCGCCAGGAGGCTGCTGCTGCTCACAGCCATCCTAGGCATGTGCATGCTCATCGGCGATGGCATCCTCACTCCTGCAATCTCAGTCTTGTCAGCGA-TTGATGGACTCAGAGGCCCGTTCCCATCCGTCAGTAAACCTGCTG-TGGA-GGGCCTGTCGGCCGCGATTCTCGTTGGGCTGTTC-TTGCTGCAGAAGTACGGCACGTCGAAGGTGAGCTTCATGTTCTCGCCGATCATGGCGGCGTGGACGTTCGCCACCCCGGTCATCGGCGTGTACAGCATCTGGCGCTACTACCCTGGCATCTTCAAAGCCATGTCGCCGCATTACATCGTCAGATTCTTCATGACGAACCAGACCAGAGGCTGGCAGCTACTCGGCGGCACCGTCCTCTGCATCACAGGTGCCGAGGCGATGTTCGCGGATCTTGGTCACTTCAGCAAGAGGTCCATCCAGATCGCGTTCATGTCGAGCATATACCCTTCGCTGGTGCTGACGTACGCCGGGCAGACGGCGTACCTGATCAACAACGTCGACGACTTCAGCGACGGGTTCTACAAGTTCGTGCCGCGGCCGGTGTACTGGCCGATGTTCATCATCGCGACGCTGGCGGCGATCGTGGCGAGCCAGTCGCTGATCTCGGCCACCTTCTCCGTCATCAAGCAGTCGGTGGTGCTGGACTACTTCCCGCGGGTGAAGGTGGTGCACACGTCCAAGGACAAGGAAGGGGAGGTGTACTCGCCGGAGACCAACTACATGCTGATGCTGCTGTGCGTGGGCGTCATCCTCGGCTTCGGCGACGGCAAGGACATCGGCAACGCGTTCGGGGTGGTGGTGATCCTCGTGATGCTCATCACCACCATCCTGCTCACGCTGGTGATGCTCATCATCTGGGGCACCCACGTCGTGCTGGTGGCGCTCTACTTAGTGCCGTTCCTGCTCCTCGAGGCCACATACGTGAGCGCCGTGTGCACCAAGATCCTCCGCGGAGGGTGGGTGCCGTTCGCGGTGTCGGTGGCGCTGGCGGCGGTCATGTTCGGGTGGTACTACGGCCGGCAGCGGAAGACGGAGTACGAGGCGGCGAACAAGGTGACGCTGGAGCGGCTCGGCGAGCTGCTGTCCGGCCCCGGCTTGCGCCGCGTCCCGGGCCTCTGCTTCTTCTACAGCAACAGGCAGGACGGCGGGTGGCTCACCCCGGTGCTCGCGCACTACATCAGGAACATGCGGTCGCTGCACGAGGTGACCGTGTTCCTCACGCTCCGGTACCTGCTGGTGGCGAAGGTGGACGGCAAGGACAGGGTGCAGGCCGTGCGCCGGCTGGGGCCAGCGGGGGTGTACGGCTGCACGATCCAGTACGGGTACGCCGACGCGATCGACTTCGAGGAGGACGACATCGCCGGGCAGGTGGTGGGGGCGCTGCGGGAGCGGGTCGTCGACGGGGAGGAGGAGGGGGAGCGGGTGGAGGCGGCGAGGGCGGCCGGGGTGGTGCACGTGAGGGGGAAGATGAGGTTCCACGTCGGGAAGGACACGAGGCTGTTCGACCGGGTGCTGCTCGGGTTCTACGAGTTGCTGCACGGCGCGTGCCGCTCCGCGCTGCCGGCGCTCGGGATCCCGCTGCAGCAGCGCGTCGAGATCGGCATGCTCTACAAGGCCTAACGGCGCCGAACGCCACGCACGCGCCCCACGAATCCGTACGTACGTACGTGGCCATTAATTACCATTAGCAGTATAACCCCTATTATTAGTGTGGATATTATGGGTACCCCATACCCATACGGCATGGTTATCCGACCAGTCATAGGGGATAACTTATATCTATAGAATATGTAATAGATCATGACTCGGGTATTACGTTTCCTTATATATTACGGAACAGCCTAAAGTCCTGGTTTGATAATATTGTAAAGTAGATTTAGGAAACCGATACCGTATTGGTTAAGGTTTCTATCTTGTAATCCTGCCCCCCACCCTATATAAGGTGGGCAGGAGGCCCTCTAGGGGGCATGAGACAACCTGATCGTCAGATCTATAATACACCCGGCGGATTCAAATCCCCAAACAGGAGTAGGGTATTACCTCTCATTGAGAGGGCCCGAACCTGTCTAAAAAAAAAAAANAAAAAAAAANNAAAAAAAAAAAAAAANNNAAAAAANAAAA] [+] EMBL AK071698 [AAGTTTCAACCTCCCTTCTCCAACTTGCAATGTCTTCATCTCACACGGTGACAGTCTCCATGGATGTTGAAGCCGGACAGAAAAACAAAGATAAGAAGGGGATCAGCCAAGATCTGATCCTGGCTTACAAGACTCTTGGTGTTGTTTTCGGTGGCCTTGTTACCTCACCACTCTACGTCTACCCATCCATGAATTTGACGAATCCTACTGAAGAAGACTACCTGGGAATATACAGCATCATGTTCTGGACCCTCACTCTCATTGGCGTAGTCAAGTACATATGCATCGCTCTCAACGCTGACGACCACGGCGAAGGTGGCACATTTGCCATGTATTCTCTGCTCTGTCAGCACGCAAACATTGGGATCCTTCCATCCAAGAAGATCTACACTGAAGAAGAGAACCTGATCTCGAATCAGCCTGTCGTAGCTGGAAGGCCTGGAAGACTGAGAAGGTTCATCGAAAGCAGCATAATCGCCAGGAGGCTGCTGCTGCTCACAGCCATCCTAGGCATGTGCATGCTCATCGGCGATGGCATCCTCACTCCTGCAATCTCAGTCTTGTCAGCGA TTGATGGACTCAGAGGCCCGTTCCCATCCGTCAGTAAACCTGCTG TGGA GGGCCTGTCGGCCGCGATTCTCGTTGGGCTGTTC TTGCTGCAGAAGTACGGCACGTCGAAGGTGAGCTTCATGTTCTCGCCGATCATGGCGGCGTGGACGTTCGCCACCCCGGTCATCGGCGTGTACAGCATCTGGCGCTACTACCCTGGCATCTTCAAAGCCATGTCGCCGCATTACATCGTCAGATTCTTCATGACGAACCAGACCAGAGGCTGGCAGCTACTCGGCGGCACCGTCCTCTGCATCACAGGTGCCGAGGCGATGTTCGCGGATCTTGGTCACTTCAGCAAGAGGTCCATCCAGATCGCGTTCATGTCGAGCATATACCCTTCGCTGGTGCTGACGTACGCCGGGCAGACGGCGTACCTGATCAACAACGTCGACGACTTCAGCGACGGGTTCTACAAGTTCGTGCCGCGGCCGGTGTACTGGCCGATGTTCATCATCGCGACGCTGGCGGCGATCGTGGCGAGCCAGTCGCTGATCTCGGCCACCTTCTCCGTCATCAAGCAGTCGGTGGTGCTGGACTACTTCCCGCGGGTGAAGGTGGTGCACACGTCCAAGGACAAGGAAGGGGAGGTGTACTCGCCGGAGACCAACTACATGCTGATGCTGCTGTGCGTGGGCGTCATCCTCGGCTTCGGCGACGGCAAGGACATCGGCAACGCGTTCGGGGTGGTGGTGATCCTCGTGATGCTCATCACCACCATCCTGCTCACGCTGGTGATGCTCATCATCTGGGGCACCCACGTCGTGCTGGTGGCGCTCTACTTAGTGCCGTTCCTGCTCCTCGAGGCCACATACGTGAGCGCCGTGTGCACCAAGATCCTCCGCGGAGGGTGGGTGCCGTTCGCGGTGTCGGTGGCGCTGGCGGCGGTCATGTTCGGGTGGTACTACGGCCGGCAGCGGAAGACGGAGTACGAGGCGGCGAACAAGGTGACGCTGGAGCGGCTCGGCGAGCTGCTGTCCGGCCCCGGCTTGCGCCGCGTCCCGGGCCTCTGCTTCTTCTACAGCAACAGGCAGGACGGCGGGTGGCTCACCCCGGTGCTCGCGCACTACATCAGGAACATGCGGTCGCTGCACGAGGTGACCGTGTTCCTCACGCTCCGGTACCTGCTGGTGGCGAAGGTGGACGGCAAGGACAGGGTGCAGGCCGTGCGCCGGCTGGGGCCAGCGGGGGTGTACGGCTGCACGATCCAGTACGGGTACGCCGACGCGATCGACTTCGAGGAGGACGACATCGCCGGGCAGGTGGTGGGGGCGCTGCGGGAGCGGGTCGTCGACGGGGAGGAGGAGGGGGAGCGGGTGGAGGCGGCGAGGGCGGCCGGGGTGGTGCACGTGAGGGGGAAGATGAGGTTCCACGTCGGGAAGGACACGAGGCTGTTCGACCGGGTGCTGCTCGGGTTCTACGAGTTGCTGCACGGCGCGTGCCGCTCCGCGCTGCCGGCGCTCGGGATCCCGCTGCAGCAGCGCGTCGAGATCGGCATGCTCTACAAGGCCTAACGGCGCCGAACGCCACGCACGCGCCCCACGAATCCGTACGTACGTACGTGGCCATTAATTACCATTAGCAGTATAACCCCTATTATTAGTGTGGATATTATGGGTACCCCATACCCATACGGCATGGTTATCCGACCAGTCATAGGGGATAACTTATATCTATAGAATATGTAATAGATCATGACTCGGGTATT ] [+] EMBL AK119564 [ AGTTTCAACCTCCCTTCTCCAACTTGCAATGTCTTCATCTCACACGGTGTCAGTCTCCATGGATGTTGAAGCCGGACAGAAAAACAAAGATAAGAAGGGGATCAGCCAAGATCCGATCCTGGCTTACAAGACTCTTGGTGTTGTTTTCGGTGGCCTTGTTACCTCACCACTCTACGTCTACCCATCCATGAATTTGACGAATCCTACTGAAGAAGACTACCTGGGAATATACAGCATCATGTTCTGGACCCTCACTCTCATTGGCGTAGTCAAGTACATATGCATCGCTCTCAACGCTGACGACCACGGCGAAGGTGGCACATTTGCCATGTATTCTCTGCTCTGTCAGCACGCAAACATTGGGATCCTTCCATCCAAGAAGATCTACACTGAAGAAGAGAACCTGATCTCGAATCAGCCTGTCGTAGCTGGAAGGCCTGGAAGACTGAGAAGGTTCATCGAAAGCAGCATAATCGCCAGGAGGCTGCTGCTGCTCACAGCCATCCTAGGCATGTGCATGCTCATCGGCGATGGCATCCTCACTCCTGCAATCTCAGTCTTGTCAGCGA TTGATGGACTCAGAGGCCCGTTCCCATCCGTCAGTAAACCTGCTG TGGA GGGCCTGTCGGCCGCGATTCTCGTTGGGCTGTTC TTGCTGCAGAAGTACGGCACGTCGAAGGTGAGCTTCATGTTCTCGCCGATCATGGCGGCGTGGACGTTCGCCACCCCGGTCATCGGCGTGTACAGCATCTGGCGCTACTACCCTGGCATCTTCAAAGCCATGTCGCCGCATTACATCGTCAGATTCTTCATGACGAACCAGACCAGAGGCTGGCAGCTACTCGGCGGCACCGTCCTCTGCATCACAGGTGCCGAGGCGATGTTCGCGGATCTTGGTCACTTCAGCAAGAGGTCCATCCAGATCGCGTTCATGTCGAGCATATACCCTTCGCTGGTGCTGACGTACGCCGGGCAGACGGCGTACCTGTTCAACAACGTCGACGACTTCAGCGACGGGTTCTACAAGTTCGTGCCGCGGCCGGTGTACTGGCCGATGTTCATCATCGCGACGCTGGCGGCGATCGTGGCGAGCCAGTCGCTGATCTCGGCCACCTTCTCCGTCATCAAGCAGTCGGTGGTGCTGGACTACTTCCCGCGGGTGAAGGTGGTGCACACGTCCAAGGACAAGGAAGGGGAGGTGTACTCGCCGGAGACCAACTACATGCTGATGCTGCTGTGCGTGGGCGTCATCCTCGGCTTCGGCGACGGCAAGGACATCGGCAACGCGTTCGGGGTGGTGGTGATCCTCGTGATGCTCATCACCACCATCCTGCTCACGCTGGTGATGCTCATCATCTGGGGCACCCACGTCGTGCTGGTGGCGCTCTACTTAGTGCCGTTCCTGCTCCTCGAGGCCACATACGTGAGCGCCGTGTGCACCAAGATCCTCCGCGGAGGGTGGGTGCCGTTCGCGGTGTCGGTGGCGCTGGCGGCGGTCATGTTCGGGTGGTACTACGGCCGGCAGCGGAAGACGGAGTACGAGGCGGCGAACAAGGTGACGCTGGAGCGGCTCGGCGAGCTGCTGTCCGGCCCCGGCTTGCGCCGCGTCCCGGGCCTCTGCTTCTTCTACAGCAACAGGCAGGACGGCGGGTGGCTCACCCCGGTGCTCGCGCACTACATCAGGAACATGCGGTCGCTGCACGAGGTGACCGTGTTCCTCACGCTCCGGTACCTGCTGGTGGCGAAGGTGGACGGCAAGGACAGGGTGCAGGCCGTGCGCCGGCTGGGGCCAGCGGGGGTGTACGGCTGCACGATCCAGTACGGGTACGCCGACGCGATCGACTTCGAGGAGGACGACATCGCCGGGCAGGTGGTGGGGGCGCTGCGGGAGCGGGTCGTCGACGGGGAGGAGGAGGGGGAGCGGGTGGAGGCGGCGAGGGCGGCCGGGGTGGTGCACGTGAGGGGGAAGATGAGGTTCCACGTCGGGAAGGACACGAGGCTGTTCGACCGGGTGCTGCTCGGGTTCTACGAGTTGCTGCACGGCGCGTGCCGCTCCGCGCTGCCGGCGCTCGGGATCCCGCTGCAGCAGCGCGTCGAGATCGGCATGCTCTACAAGGCCTAACGGCGCCGAACGCCACGCACGCGCCCCACGAATCCGTACGTACGTACGTGGCCATTAATTACCATTAGCAGTATAACCCCTATTATTAGTGTGGATATTATGGGTACCCCATACCCATACGGCATGGTTATCCGACCAGTCATAGGGGATAACTTATATCTATAGAATATGTAATAGATCATGACTCGGGTATTACGTTTCCTTATATATTACGGAACAGCCTAAAGTCCTGGTTTGATAATATTGTAAAGTAGATTTAGGAAACCGATACCGTATTGGTTAAGGTTTCTATCTTGTAATCCTGCCCCCCACCCTATATAAGGTGGGCAGGAGGCCCTCTAGGGGGCATGAGACAACCTGATCGTCAGATCTATAATACACCCGGCGGATTCAAATCCCCAAACAGGAGTAGGGTATTACCTCTCATTGAGAGGGCCC ] [+] EMBL C71725 [ ATGCATCGCTCTCAACGCTGACGACCACGGCGAAGGTGGCACATTTGCCATGTATTCTCTGCTCTGTCAGCACGCAAACATTGGGATCCTTCCATCCAAGAAGATCTACACTGAAGAAGAGAACCTGATCTCGAATCAGCCTGTCGTAGCTGGAAGGCCTGGAAGACTGAGAAGGTTCATCGAAAGCAGCATAATCGCCAGGAGGCTGCTGCTGCTCACAGCCATCCTAGGCATGTGCATGCTCATCGGCGATGGCATCCTCACTCCTGCAATCTCAGTCTTGTCAGCGATTTGATGGACTCAGAGGCCCGTTNCCATCCGTCAGTAAACCTGCTGTTGGAGGGGCCTNTCGGCCGCGATTCTCGTTGGGCTGTTCTTTGCTNCAGAAGTACGGNA GTCGAAGGTGAG TTTATGTTCTCGCCG TCATGGGGGCGTn ] [+] EMBL AF129485 [ TGCATCGCTCTCAACGCTGACGACCACGGCGAAGGTGGCACATTTGCCATGTATTCTCTGCTCTGTCAGCACGCAAACATTGGGATCCTTCCATCCAAGAAGATCTACACTGAAGAAGAGAACCTGATCTCGAATCAGCCTGTCGTAGCTGGAAGGCCTGGAAGACTGAGAAGGTTCATCGAAAGCAGCATAATCGCCAGGAGGCTGCTGCTGCTCACAGCCATCCTAGGCATGTGCATGCTCATCGGCGATGGCATCCTCACTCCTGCAATCTCAGTCTTGTCAGCGA TTGATGGACTCAGAGGCCCGTTCCCATCCGTCAGTAAACCTGCTG TGGA GGGCCTGTCGGCCGCGATTCTCGTTGGGCTGTTC TTGCTGCAGAAGTACGGCACGTCGAAGGTGAGCTTCATGTTCTCGCCGATCATGGCGGCGTGGACGTTCGCCACCCCGGTCATCGGCGTGTACAGCATCTGGCGCTACTACCCTGGCATCTTCAAAGCCATGTCGCCGCATTACATCGTCAGATTCTTCATGACGAACCAGACCAGAGGCTGGCAGCTACTCGGCGGCACCGTCCTCTGCATCACAGGTGCCGAGGCGATGTTCGCGGATCTTGGTCACTTCAGCAAGAGGTCCATCCAGATCGCGTTCATGTCGAGCATATACCCTTCGCTGGTGCTGACGTACGCCGGGCAGACGGCGTACCTGATCAACAACGTCGACGACTTCAGCGACGGGTTCTACAAGTTCGTGCCGCGGCCGGTGTACTGGCCGATGTTCATCATCGCGACGCTGGCGGCGATCGTGGCGAGCCAGTCGCTGATCTCGGCCACCTTCTCCGTCATCAAGCAGTCGGTGGTGCTGGACTACTTCCCGCGGGTGAAGGTGGTGCACACGTCCAAGGACAAAGAAAGGGAAGTGTACTCCCCGGAAAACAACTACATGCTGATGCTGCTGTGCGTGGGCGTCATCCTCCGGTTCCGCGAAAGGAAAGACATCGGCAACGCGTTCGGGGTGGTGGTGATCCTCGTGATGCTCATCACCACCATCCTGCTCACGCTGGTGATGCTCATCATCTGGGGCACCCACGTCGTGCTGGTGGCGCTCTACTTAGTGCCGTTCCTGCTCCTCGAGGCCACATACGTGAGCGCCGTGTGCACCAAGATCCTCCGCGGAGGGTGGGTGCCGTTCGCGGTGTCGGTGGCGCTGGCGGCGGTCATGTTCGGGTGGTACTACGGCCGGCAGCGGAAGACGGAGTACGAGGCGGCGAACAAGGTGACGCTGGAGCGGCTCGGCGAGCTGCTGTCCGGCCCCGGCTTGCGCCGCGTCCCGGGCCTCTGCTTCTTCTACAGCAACAGGCAGGACGGCGGGTGGCTCACCCCGGTGCTCGCGCACTACATCAGGAACATGCGGTCGCTGCACGAGGTGACCGTGTTCCTCACGCTCCGGTACCTGCTGGTGGCGAAGGTGGACGGCAAGGACAGGGTGCAGGCCGTGCGCCGGCTGGGGCCAGCGGGGGTGTACGGCTGCACGATCCAGTACGGGTACGCCGACGCGATCGACTTCGAGGAGGACGACATCTCCGGGCAGGTGGTGGGGGCGCTGCGGGAGCGGGTCGTCGACGGGGAGGAGGAGGGGGAGCGGGTGGAGGCGGCGAGGGCGGCCGGGGTGGTGCACGTGAGGGGGAAGATGAGGTTCCACGTCGGGAAGGACACGAGGCTGTTCGACCGGGTGCTGCTCGGGTTCTACGAGTTGCTGCACGGCGCGTGCCGCTCCGCGCTGCCGGCGCTCGGGATCCCGCTGCAGCAGCGCGTCGAGATCGGCATGCTCTACAAGGCCTAACGGCGCCGAACGCCACGCACGCGCCCCACGAATCCGTACGTACGTACGTGGCCATTAATTACCATTAGCAGTATAACCCCTATTATTAGTGTGGATATTATGGGTACCCCATACCCATACGGCATGGTTATCCGACCAGTCATAGGGGATAACTTATATCTATAGAATATGTAATAGATCATGACTCGGGTATTACGTTTCCTTATATATTACGGAACAGCCTAAAGTCCTGGTTTGATAATATTGTAAAGTAGATTTAGGAAACCGATACCGTATTGGTTAAGGTTTCTATCTTGTAATCCTGCCCCCCACCCTATATAAGGTGGGCAGGAGGCCCTCTAGGGGGCATGAGACAACCTGATCGTCAGATCTATAATACACCCGGCGGATTCAAATCCCCAAACAGGAGTAGGGTATTACCTCTCATTGAGAGGGCCCGAACCTGTCTAAAAAAAAAAAA ] [+] EMBL C98429 [ CGGAACAGCCTAAAGTCCTGGTTTGATAATATTGTAAAGTAGATTTAGGAAACCGATACCGTATTGGTTAAGGTTTCTATCTTGTAATCCTGCCCCCCACCCTATATAAGGTGGGCAGGAGGCCCTCTAGGGGGCATGAGACAACCTGATCGTCAGATCTATAATACACCCGGCGGATTCAAATCCCCAAACAGGAGTAGGGTNTTACCTCTNATTGAGAGGGCCCGAACCTGTCTAAAAAAAAAAAANAAAAAAAAANNAAAAAAAAAAAAAAANNNAAAAAANAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||