These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8249#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2725 fasta sequence [TGGTCCATCCATACATACAGCCATAGAGAGAGAGAGTGTGTGTGTGGCAGATTGCAAAGCCATTTGCACGGCATCCTTAATTCATTTTCCTGCGCCTGTCAATTGCAGCAAGATCACATGAACTCACCAAACCCCTCCATAAATTAATCACAAGGCACCAGCCCCACCCTCTCTCCATCTCCACGATGCATGTTCCACTGCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTTCCTGTCATGGACGGATGGACCAGGGCCTAGCTCGTACTACTACAAAAGACGGCATCAGTTTTTTGGCCACCTCTCCTCTCCTTGTTTGCCTCCTTTCTTCTTCTTCTTCTTCTCCCTCATTTGAGCTGAGAAGTTAAGTTGGAACCAAGAACTATACTAGTTATATTATGTAGAGGAAACATCACAAAAGAATATCAGAAAATAAAAAGAAACCGTTCCATGCCACCCTGAGATTCTCCTACAAGCTAGCCCAACCAAGGAAACAGCAATTTTTAAGCTGTTTCTCTTGATACTCGATCTACATCTTTTCCCTTAGTTTAACACTCTTTTTCAGTGGGTTTACTACTCTTGTGTGGTGGTGGTAGTGGTAGATCAAGAGCCAAGAAGTCCGGGAAAAAAATTCTACTTGTTTCGTCCATTTGGTTTAGTCTGCCAAAGCAGAAGTCAGTGGCGAGATCTTGTTTCTACTCCATTCGCATCATTCTGCTGCCAATTTGCCCTCAGAGAAGAGGGAGATTCGGCAGCGGAAGAGAGCGGAGTATCTCCGGCGATGGCGGCGGCGCTGGAGTGCTGGTCGGGCCGGCCGAGCACCGACGAGGAGATGGTGGAGCAGGTGCTCATGAAGCCCCACGTCCGCTCGGACGATTCCCTCCCCACCTGCGCCGACGCGGCCTTCGCCGCCGGCGAGCCGACGACGGCGCAGGCGGCGCCGAAGAAGTGGCAGCGGCTGGGGCGCAACTTCGCCGGCGCCATCGCGGCGTTCAAGAGCTCGCTGAACCTGGACAACGGCAGCCTCCCTCGCGACCCCTCGCCGCGCGCCGTCGGCGAGAGGCCGCCGCTCCTCGTCCGCGGCTTCCAGCAGCTCTACTCCCGCGGCGGCGCCACCCAGCAGCTGCCGGAGAAGCTCGTCGCTGACCTCCGCCGCCACTTCGACGCTCTTCCCAACAGCTATGCACAGGCTGGATTTGACATGAAAGATGTGCTCTTGCATGCCCGTCTTGTAGAGCAGGCAGCTGGTGAGGATCAGCCTGCAGTGAGTATTGAGGAAGTTCCTGGAAGCAATGGCAGAGGAGGTGCCAATGAAGGAACTGTTTTTCAGCTCACTTTTGCCTGCAGTGCACCACTTTCATGGCAGTCAATGTCAGGCTCACTTGATAGTCCTTCATTTTGCTGCAAGAGGATCCAGATCTTCGAGAAGAGAGGATTGACGCTTGGTGTTGTAATGATACTCGTGCAGCCTGGGAATGAGGTGTTCTTCAAGAACCGGGTCGACGCAGCACTGAAATCAGCAATAAAGAAGCAGCGGAAGAACAGCGGCGGTGTTAAGCTCCCATTTGGGCTCTGTGGTTGTCAAGAAGAAGGTTCAAGAAACTTTGATGAGGAATCTATGTTTGATCCAGATGATGGTCAGGTTCTTGACAATGAGCCAACTTGCAAGCCACAGCTGCCTACCCCACTACCACAATCATCAGTTTTTGTTTCTATAGACGAGTGGCAAACCATTCGATCTGGTGGCGAGGAGCTTGGCCGCTGGATGCTGAGCTCTGAGGAAATCGAGTTTATTGATTGGGTTGGTCCAAATTCATTCAAGGGTGTTTTTAGAGGAAGGAAGGTTTGGGTCAACAAAATGAGGGGCTGTGACATGGGAAGTGCTTATGATGTTGAAATCCGTCAGGACTTGTTGCAGCTGATGAGCTGTGGCCAGAGGAACATCCTCCAATTCCATGGGATTTGCTTCAATGAGAACCATGGGCTCTGCATAATAACAAGGATGATGGAAGGAGGATCGGTTCATGATATCATCATGCAGAGAAGCAAGAGATTGTCACTCCGAGACATTCTTAAGATCGCTATTGATGTTGCTGAGGGTTTGGCCTTCATGAACAGCTACGCAATTACCTATCGTGATCTTAACGCTCGGAGGATCCTGCTCGACAGGCAAGGAAATGCGTGCCTCGGGGATATGGGCATTGTTACCCCTTGTAATAATGCTGGTGAGGTCACCGAGTACGAGACTTCTGGCTATCGATGGCTAGCTCCTGAGATCATTGCCGGAGATCCCGAGAGCGTGTCGGAGACCTGGATGAGCAACGTCTACAGCTACGGGATGGTGCTGTGGGAGATGGTCACAGGTGAGGAGGCATACTCCACATACTCCCCGGTGCAGGCAGCGGTGGGGATCGCCGCATGCGGGCTGAGGCCAGAGATACCAAGAGACTGCCCTCATTTCCTCAGGTCACTGATGACCAGGTGCTGGGACAACAACCCTCTGAAGCGCCCCCAGTTTTCAGAGATCATCTCCATGCTGCAAAGGCAGAATGTCAGATAGTTTTTCTCCTTCTTCTTCTTCTTCTTTTCCTATGCTGCATATCTGC-TTTTGTCT-GGCTGTTTGCCCCAATCATGCAGGGAACTGCATATGAGAGAATATAATATATGTGCAAAGGCTTGGTATATTGCTCATCTTGCTTCTAAAAAAATGCTC] [+] EMBL AK102156 [TGGTCCATCCATACATACAGCCATAGAGAGAGAGAGTGTGTGTGTGGCAGATTGCAAAGCCATTTGCACGGCATCCTTAATTCATTTTCCTGCGCCTGTCAATTGCAGCAAGATCACATGAACTCACCAAACCCCTCCATAAATTAATCACAAGGCACCAGCCCCACCCTCTCTCCATCTCCACGATGCATGTTCCACTGCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTTCCTGTCATGGACGGATGGACCAGGGCCTAGCTCGTACTACTACAAAAGACGGCATCAGTTTTTTGGCCACCTCTCCTCTCCTTGTTTGCCTCCTTTCTTCTTCTTCTTCTTCTCCCTCATTTGAGCTGAGAAGTTAAGTTGGAACCAAGAACTATACTAGTTATATTATGTAGAGGAAACATCACAAAAGAATATCAGAAAATAAAAAGAAACCGTTCCATGCCACCCTGAGATTCTCCTACAAGCTAGCCCAACCAAGGAAACAGCAATTTTTAAGCTGTTTCTCTTGATACTCGATCTACATCTTTTCCCTTAGTTTAACACTCTTTTTCAGTGGGTTTACTACTCTTGTGTGGTGGTGGTAGTGGTAGATCAAGAGCCAAGAAGTCCGGGAAAAAAATTCTACTTGTTTCGTCCATTTGGTTTAGTCTGCCAAAGCAGAAGTCAGTGGCGAGATCTTGTTTCTACTCCATTCGCATCATTCTGCTGCCAATTTGCCCTCAGAGAAGAGGGAGATTCGGCAGCGGAAGAGAGCGGAGTATCTCCGGCGATGGCGGCGGCGCTGGAGTGCTGGTCGGGCCGGCCGAGCACCGACGAGGAGATGGTGGAGCAGGTGCTCATGAAGCCCCACGTCCGCTCGGACGATTCCCTCCCCACCTGCGCCGACGCGGCCTTCGCCGCCGGCGAGCCGACGACGGCGCAGGCGGCGCCGAAGAAGTGGCAGCGGCTGGGGCGCAACTTCGCCGGCGCCATCGCGGCGTTCAAGAGCTCGCTGAACCTGGACAACGGCAGCCTCCCTCGCGACCCCTCGCCGCGCGCCGTCGGCGAGAGGCCGCCGCTCCTCGTCCGCGGCTTCCAGCAGCTCTACTCCCGCGGCGGCGCCACCCAGCAGCTGCCGGAGAAGCTCGTCGCTGACCTCCGCCGCCACTTCGACGCTCTTCCCAACAGCTATGCACAGGCTGGATTTGACATGAAAGATGTGCTCTTGCATGCCCGTCTTGTAGAGCAGGCAGCTGGTGAGGATCAGCCTGCAGTGAGTATTGAGGAAGTTCCTGGAAGCAATGGCAGAGGAGGTGCCAATGAAGGAACTGTTTTTCAGCTCACTTTTGCCTGCAGTGCACCACTTTCATGGCAGTCAATGTCAGGCTCACTTGATAGTCCTTCATTTTGCTGCAAGAGGATCCAGATCTTCGAGAAGAGAGGATTGACGCTTGGTGTTGTAATGATACTCGTGCAGCCTGGGAATGAGGTGTTCTTCAAGAACCGGGTCGACGCAGCACTGAAATCAGCAATAAAGAAGCAGCGGAAGAACAGCGGCGGTGTTAAGCTCCCATTTGGGCTCTGTGGTTGTCAAGAAGAAGGTTCAAGAAACTTTGATGAGGAATCTATGTTTGATCCAGATGATGGTCAGGTTCTTGACAATGAGCCAACTTGCAAGCCACAGCTGCCTACCCCACTACCACAATCATCAGTTTTTGTTTCTATAGACGAGTGGCAAACCATTCGATCTGGTGGCGAGGAGCTTGGCCGCTGGATGCTGAGCTCTGAGGAAATCGAGTTTATTGATTGGGTTGGTCCAAATTCATTCAAGGGTGTTTTTAGAGGAAGGAAGGTTTGGGTCAACAAAATGAGGGGCTGTGACATGGGAAGTGCTTATGATGTTGAAATCCGTCAGGACTTGTTGCAGCTGATGAGCTGTGGCCAGAGGAACATCCTCCAATTCCATGGGATTTGCTTCAATGAGAACCATGGGCTCTGCATAATAACAAGGATGATGGAAGGAGGATCGGTTCATGATATCATCATGCAGAGAAGCAAGAGATTGTCACTCCGAGACATTCTTAAGATCGCTATTGATGTTGCTGAGGGTTTGGCCTTCATGAACAGCTACGCAATTACCTATCGTGATCTTAACGCTCGGAGGATCCTGCTCGACAGGCAAGGAAATGCGTGCCTCGGGGATATGGGCATTGTTACCCCTTGTAATAATGCTGGTGAGGTCACCGAGTACGAGACTTCTGGCTATCGATGGCTAGCTCCTGAGATCATTGCCGGAGATCCCGAGAGCGTGTCGGAGACCTGGATGAGCAACGTCTACAGCTACGGGATGGTGCTGTGGGAGATGGTCACAGGTGAGGAGGCATACTCCACATACTCCCCGGTGCAGGCAGCGGTGGGGATCGCCGCATGCGGGCTGAGGCCAGAGATACCAAGAGACTGCCCTCATTTCCTCAGGTCACTGATGACCAGGTGCTGGGACAACAACCCTCTGAAGCGCCCCCAGTTTTCAGAGATCATCTCCATGCTGCAAAGGCAGAATGTCAGATAGTTTTTCTCCTTCTTCTTCTTCTTCTTTTCCTATGCTGCATATCTGC TTTTGTCT GGCTGTTTGCCCCAATCATGCAGGGAACTGCATATGAGAGAATATAATATATGTGCAAAGGCTTG ] [+] EMBL AK072429 [ CCTTGTTTGCCTCCTTTCTTCTTCTTCTTCTTCTCCCTCATTTGAGCTGAGAAGTTAAGTTGGAACCAAGAACTATACTAGTTATATTATGTAGAGGAAACATCACAAAAGAATATCAGAAAATAAAAAGAAACCGTTCCATGCCACCCTGAGATTCTCCTACAAGCTAGCCCAACCAAGGAAACAGCAATTTTTAAGCTGTTTCTCTTGATACTCGATCTACATCTTTTCCCTTAGTTTAACACTCTTTTTCAGTGGGTTTACTACTCTTGTGTGGTGGTGGTAGTGGTAGATCAAGAGCCAAGAAGTCCGGGAAAAAAATTCTACTTGTTTCGTCCATTTGGTTTAGTCTGCCAAAGCAGAAGTCAGTGGCGAGATCTTGTTTCTACTCCATTCGCATCATTCTGCTGCCAATTTGCCCTCAGAGAAGAGGGAGATTCGGCAGCGGAAGAGAGCGGAGTATCTCCGGCGATGGCGGCGGCGCTGGAGTGCTGGTCGGGCCGGCCGAGCACCGACGAGGAGATGGTGGAGCAGGTGCTCATGAAGCCCCACGTCCGCTCGGACGATTCCCTCCCCACCTGCGCCGACGCGGCCTTCGCCGCCGGCGAGCCGACGACGGCGCAGGCGGCGCCGAAGAAGTGGCAGCGGCTGGGGCGCAACTTCGCCGGCGCCATCGCGGCGTTCAAGAGCTCGCTGAACCTGGACAACGGCAGCCTCCCTCGCGACCCCTCGCCGCGCGCCGTCGGCGAGAGGCCGCCGCTCCTCGTCCGCGGCTTCCAGCAGCTCTACTCCCGCGGCGGCGCCACCCAGCAGCTGCCGGAGAAGCTCGTCGCTGACCTCCGCCGCCACTTCGACGCTCTTCCCAACAGCTATGCACAGGCTGGATTTGACATGAAAGATGTGCTCTTGCATGCCCGTCTTGTAGAGCAGGCAGCTGGTGAGGATCAGCCTGCAGTGAGTATTGAGGAAGTTCCTGGAAGCAATGGCAGAGGAGGTGCCAATGAAGGAACTGTTTTTCAGCTCACTTTTGCCTGCAGTGCACCACTTTCATGGCAGTCAATGTCAGGCTCACTTGATAGTCCTTCATTTTGCTGCAAGAGGATCCAGATCTTCGAGAAGAGAGGATTGACGCTTGGTGTTGTAATGATACTCGTGCAGCCTGGGAATGAGGTGTTCTTCAAGAACCGGGTCGACGCAGCACTGAAATCAGCAATAAAGAAGCAGCGGAAGAACAGCGGCGGTGTTAAGCTCCCATTTGGGCTCTGTGGTTGTCAAGAAGAAGGTTCAAGAAACTTTGATGAGGAATCTATGTTTGATCCAGATGATGGTCAGGTTCTTGACAATGAGCCAACTTGCAAGCCACAGCTGCCTACCCCACTACCACAATCATCAGTTTTTGTTTCTATAGACTAGTGGCAAACCATTCGATCTGGTGGCGAGGAGCTTGGCCGCTGGATGCTGAGCTCTGAGGAAATCGAGTTTATTGATTGGGTTGGTCCAAATTCATTCAAGGGTGTTTTTAGAGGAAGGAAGGTTTGGGTCAACAAAATGAGGGGCTGTGACATGGGAAGTGCTTATGATGTTGAAATCCGTCAGGACTTGTTGCAGCTGATGAGCTGTGGCCAGAGGAACATCCTCCAATTCCATGGGATTTGCTTCAATGAGAACCATGGGCTCTGCATAATAACAAGGATGATGGAAGGAGGATCGGTTCATGATATCATCATGCAGAGAAGCAAGAGATTGTCACTCCGAGACATTCTTAAGATCGCTATTGATGTTGCTGAGGGTTTGGCCTTCATGAACAGCTACGCAATTACCTATCGTGATCTTAACGCTCGGAGGATCCTGCTCGACAGGCAAGGAAATGCGTGCCTCGGGGATATGGGCATTGTTACCCCTTGTAATAATGCTGGTGAGGTCACCGAGTACGAGACTTCTGGCTATCGATGGCTAGCTCCTGAGATCATTGCCGGAGATCCCGAGAGCGTGTCGGAGACCTGGATGAGCAACGTCTACAGCTACGGGATGGTGCTGTGGGAGATGGTCACAGGTGAGGAGGCATACTCCACATACTCCCCGGTGCAGGCAGCGGTGGGGATCGCCGCATGCGGGCTGAGGCCAGAGATACCAAGAGACTGCCCTCATTTCCTCAGGTCACTGATGACCAGGTGCTGGGACAACAACCCTCTGAAGCGCCCCCAGTTTTCAGAGATCATCTCCATGCTGCAAAGGCAGAATGTCAGATAGTTTTTCTCCTTCTTCTTCTTCTTCTTTTCCTATGCTGCATATCTGC TTTTGTCT GGCTGTTTGCCCCAATCATGCAGGGAACTGCATATGAGAGAATATAATATATGTGCA ] [+] EMBL CF308239 [ AGGATTGACGCTTGGTGTTGTAATGATACTCGTGCAGCCTGGGAATGAGGTGTTCTTCAAGAACCGGGTCGACGCAGCACTGAAATCAGCAATAAAGAAGCAGCGGAAGAACAGCGGCGGTGTTAAGCTCCCATTTGGGCTCTGTGGTTGTCAAGAAGAAGGTTCAAGAAACTTTGATGAGGAATCTATGTTTGATCCAGATGATGGTCAGGTTCTTGACAATGAGCCAACTTGCAAGCCACAGCTGCCTACCCCACTACCACAATCATCAGTTTTTGTTTCTATAGACGAGTGGCAAACCATTCGATCTGGTGGCTAGGAGCTTGGCCGCTGGATGCTGAGCTCTGAGGAAATCGAGTTTATTGATTGGGTTGGTCCAAATTCATTCAAGGGTGTTTTTAGAGGAAGGAAGGTTTGGGTCAACAAAATGAGGGGCTGTGACATGGGAAGTGCTTATGATGTTGAAATCCGTCAGGACTTGTTGCAGCTGATGAGCTGTGGCCAGAGGAACATCCTCCAATTCCATGGGTTTTGCTTCAATGAGAACCATGGGCTCTGCATAATAACAAGGATGATGGAAGGAGGATCGGTTCATGAT ] [+] EMBL CA765573 [ GAGAACCATGGGCTCTGCATAATAACAAGGATGATGGAAGGAGGATCGGTTCATGATATCATCATGCAGAGAAGCAAGAGATTGTCACTCCGAGACATTCTTAAGATCGCTATTGATGTTGCTGAGGGTTTGGCCTTCATGAACAGCTATGCAATTACCTATCGTGATCTTAACGCTCGGAGGATCCTGCTCGACAGGCAAGGAAATGCGTGCCTCGGGGATATGGGCATTGTTACCCCTTGTAATAATGCTGGTGAGGTCACCGAGTATGAGACTTCTGGCTATCGATGGCTAGCTCCTGAGATCATTGCCGGAGATCCCGAGAGCGTGTCGGAGACCTGGATGAGCAACGTCTACAGCTACGGGATGGTGCTGTGGGAGATGGTCACAGGTGAGGAGGCATACTCCACATACTCCCCGGTGCAGGCAGCGGTGGGGATCGCCGCATGCGGGCTGAGGCCAGAGATACCAAGAGACTGCCCTCATTTCCTCAGGTCACTGATGACCAGGTGCTGGGACAACAACCCTCTGAAGCGCCCCCAGTTTTCAGAGATCATCTCCATGCTGCAAAGGCAGAATGTCAGGTAGNTTTTCTTCTTCTTCTTCTTCTTCTTTTCCTATGCTGCATATCTGCTTTTTGTCTGGGCTGNTTGCCCCAATCATGCAGGGAACTGCATATGAGAG TATAATATATGTGCAAAGGCTTGGTATATTGCTCATCTTGCTTCTAAAAAAATGCTC] [-] EMBL CF308240 [ TGATGTTGCTGAGGGTTTGGCCTTCATGAACAGCTACGCAATTACCTATCGTGATCTTAACGCTCGGAGGATCCTGCTCGACAGGCAAGGAAATGCGTGCCTCGGGGATATGGGCATTGTTACCCCTTGTAATAATGCTGGTGAGGTCACCGAGTACGAGACTTCTGGCTATCGATGGCTAGCTCCTGAGATCATTGCCGGAGATCCCGAGAGCGTGTCGGAGACCTGGATGAGCAACGTCTACAGCTACGGGATGGTGCTGTGGGAGATGGTCACAGGTGAGGAGGCATACTCCACATACTCCCCGGTGCAGGCAGCGGTGGGGATCGCCGCATGCGGGCTGAGGCCAGAGATACCAAGAGACTGCCCTCATTTCCTCAGGTCACTGATGACCAGGTGCTGGGACAACAACCCTCTGAAGCGCCCCCAGTTTTCAGAGATCATCTCCATACTGCAAAGGCAGAATGTCAGATAGTTTTTCTCCTTCTTCTTCTTCTTCTTTTCCTATGCTGCATATCTGC TTTTGTCT GGCTGTTTGCCCCAATCATGCAGGGAACTGCATATGAGAGAATATAATATATGTGCAAAGGCTTGTTATAaaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||