These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8283#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2742 fasta sequence [GTGGTGCTGCCGATCGGCGCGCAGAAGCACGACCCGGCGTGGAAGCACTGCCAGATGGTGAGGTCGGCGGGGCGCGTGAGGCTCAAGTGCGTCTACTGCCACAAGCACTTCCTCGGCGGCGGCATCCACCGCTTCAAGGAGCACCTCGCGAACCGCCCCGGCAACGCGTGCTGCTGCCCCAAGGTGCCCCGCGAGGTGCAGGAGACGATGCTCCACAGCCTCGACGCCGTCGCGGCGAAGAAGAAACGGAAGCAATCGCTGGCCGAGGGCATCAGGCGAATCACCCACTCGGCTCCCGCCGCCGCCGCCTCCGCCTCTCCGCCGGCTCCGGCCGATGCCGCCGAGATGGAGAGCCCCATCCACATGATCCCGCTCAACGAGGTGCTCGACTTGGGCTCCGTTCCACTCGAGGAGACACCACCGGAGACCAGGGAGATGAAGGGGAGTATTAGCAAGAAGAGAAAGAAATTGGCTGCGAGGCAAGCCTCCACGGCGCCCCTTGCTCATCAGAATCAGCAGCCTCTTCAGTCTACTCCTGCTGGTCTGACCCAGCCTTTTCATCAGATGGTCGTGGCGTTTGATTCGGCTGCATCGCAACTGATGCATTTTGACCAGCCCGGCTCGAACAAGGAGCAGGTTTATATGGCAATTGGGAGGTTCTTGTATGACGCTGGTGTGTCACTGGAGGCAGTAAATTCCGTTTACTTTCAGCCTATGCTTGAAGCTGTTGCCTCAGCAGGAGGGAAGCCTGAGGCGTTCTCGTATCACGACTTCCGTGGTTCCATATTGAAGAAGTCGCTGGATGAAGTGACTGCTCAGTTGGAGTTCTACAAGGGATCATGGACCCGGACAGGGTGCACATTGTTGGCCGATGAGTGGACTACTGACAGAGGCAGAACATTAATAAACTTCTCTGTGTATTGCCCGGAAGGTACTATGTTTCTGAAGTCAGTCGATGCAACTGACATTGTCGTGTCGTCAGATCCGCTGTATGAGTTGCTGAAGAATGTGGTTGAGGAAGTTGGTGAGAAAAATGTTGTCCAAGTAATCACAAACAATTCTGAGATTCATGCGGTGGCAGGAAAGAGGCTATGCGAAACTTTTCCTACATTGTTCTGGTCTCAATGCTCTTTCCAGTGCATCGATGGGATGCTTGAAGATTTCAGTAAGGTGGGGGCAATCAATGAGATCATATGTAATGCAAAGGTCATTACGGGA-TTTATCTATAACAGCGCATTTGCATTTAACTTGATGAAAAGGCATCTTCATGGGAAAGATCTGCTAGTTCCTGCAGAAACTCGTGCTGCTATGAACTTTGTCACACTGAAGAACATGTACAATCTAAAGGATTCTTTGGAAGCCATGATTAGCTCAGATGAATGGATTCACTACTTGCTGCCAAAGAAACCTGGTGGGGTTGAAGTGACCAATCTTATTGGCAATTTGCAGTTTTGGTCTTCGTGTGCTGCAGTGGTTCGCATCACCGAACCACTTGTGCATCTTCTTAAGTTAGTCGGTAGCAATAAGAGGCCATCTATGGGGTATGTTTACGCTGGATTGTATCAGGCCAAAGCAGCAATCAAGAAAGAGCTGGTGAGGAAGAACGACTACATGGCTTACTGGGATATTATTGACTGGAGATGGAACAAGGATGCACCACGACCACTTCATTTAGCTGGTTTTTTCCTGAACCCATTATTTTTCGATGGTGTTCGAGGTGGAACATCAAGTGAGATATTCTCAGGTATGCTAGACTGCGTAGAAAGGTTGGTTTCTGATGTGAAAATCCAAGATAAAATCCAAAAGGAGCTCAATGTATACCGGAGTGAGGCAGCTGGGGATTTTCGTAGGCAAATGGCTATCCGAGCCAGGCGCACTTTACCTCCTGCTGAATGGTGGTATACGTATGGAGGAGCTTGCCCAAATTTGACGCGTTTAGCAGTTCGCATTCTCAGTCAAACCTGCAGTGCTAAAGGATGTGACCGGAGACACATTTCTTTCGAACAAATTCATGACCAAAGAATGAATCTTTTTGAACGCCAGCGAATGCATCATCTCACATTTGTTCAGTACAATCTAAGGCTACAACACAGGCAACAACACAAGACCAAAGCATTTGATCCTGTCTCAGTCGACAACATTGACATAGTCGACGATTGGGTTGTGGATAGATCTGCACTTATATCTGGCCAGGCAGAGCAGTCAAACTGGACGGAGATTAACCAACCAGTCAACAATATCACATCAATGGGTCCAAGTGATGATGATGAATTCGAGTCCTTCATTGAAGGAGTTGATGACAAAATGATCCAAGGTGCTTCTCGGGGAACTCAGGAGGATGATGAATAACTCTGAGGAAGAGAGCCGTCACCTGTGCTTATAGGTGGAGTCATTACGATTGGGTAGTAGGGATGCTAGTTTTAGCTTGGATAGGATGTAAACTAATGTTGCATGGAGCCATGGACACAATCTGGCATTGCTTGTCAGTTGTCAACATTTTGCAAGTAGTTCTTTTTTCCTCGGCAACCAATCTAATGTC-CTCTGTTTGGAACACAAGAAAGCCCGTTCAGTTCTCGTATGAATCAGAAGAATCCCTAGAACCATGGCCTGAACTGTCTCCATTTGTTGTCATCTTTTTGTTTGATACCTTGCTAATATTTGTCATGTTCATCTTTTGTTGTAAAAGCAGAACATTAGGACAGCATTTTTTTAGGTTTTCATTGTCTTTTTCCCATGATGAGA] [+] EMBL AK099787 [GTGGTGCTGCCGATCGGCGCGCAGAAGCACGACCCGGCGTGGAAGCACTGCCAGATGGTGAGGTCGGCGGGGCGCGTGAGGCTCAAGTGCGTCTACTGCCACAAGCACTTCCTCGGCGGCGGCATCCACCGCTTCAAGGAGCACCTCGCGAACCGCCCCGGCAACGCGTGCTGCTGCCCCAAGGTGCCCCGCGAGGTGCAGGAGACGATGCTCCACAGCCTCGACGCCGTCGCGGCGAAGAAGAAACGGAAGCAATCGCTGGCCGAGGGCATCAGGCGAATCACCCACTCGGCTCCCGCCGCCGCCGCCTCCGCCTCTCCGCCGGCTCCGGCCGATGCCGCCGAGATGGAGAGCCCCATCCACATGATCCCGCTCAACGAGGTGCTCGACTTGGGCTCCGTTCCACTCGAGGAGACACCACCGGAGACCAGGGAGATGAAGGGGAGTATTAGCAAGAAGAGAAAGAAATTGGCTGCGAGGCAAGCCTCCACGGCGCCCCTTGCTCATCAGAATCAGCAGCCTCTTCAGTCTACTCCTGCTGGTCTGACCCAGCCTTTTCATCAGATGGTCGTGGCGTTTGATTCGGCTGCATCGCAACTGATGCATTTTGACCAGCCCGGCTCGAACAAGGAGCAGGTTTATATGGCAATTGGGAGGTTCTTGTATGACGCTGGTGTGTCACTGGAGGCAGTAAATTCCGTTTACTTTCAGCCTATGCTTGAAGCTGTTGCCTCAGCAGGAGGGAAGCCTGAGGCGTTCTCGTATCACGACTTCCGTGGTTCCATATTGAAGAAGTCGCTGGATGAAGTGACTGCTCAGTTGGAGTTCTACAAGGGATCATGGACCCGGACAGGGTGCACATTGTTGGCCGATGAGTGGACTACTGACAGAGGCAGAACATTAATAAACTTCTCTGTGTATTGCCCGGAAGGTACTATGTTTCTGAAGTCAGTCGATGCAACTGACATTGTCGTGTCGTCAGATCCGCTGTATGAGTTGCTGAAGAATGTGGTTGAGGAAGTTGGTGAGAAAAATGTTGTCCAAGTAATCACAAACAATTCTGAGATTCATGCGGTGGCAGGAAAGAGGCTATGCGAAACTTTTCCTACATTGTTCTGGTCTCAATGCTCTTTCCAGTGCATCGATGGGATGCTTGAAGATTTCAGTAAGGTGGGGGCAATCAATGAGATCATATGTAATGCAAAGGTCATTACGGGA TTTATCTATAACAGCGCATTTGCATTTAACTTGATGAAAAGGCATCTTCATGGGAAAGATCTGCTAGTTCCTGCAGAAACTCGTGCTGCTATGAACTTTGTCACACTGAAGAACATGTACAATCTAAAGGATTCTTTGGAAGCCATGATTAGCTCAGATGAATGGATTCACTACTTGCTGCCAAAGAAACCTGGTGGGGTTGAAGTGACCAATCTTATTGGCAATTTGCAGTTTTGGTCTTCGTGTGCTGCAGTGGTTCGCATCACCGAACCACTTGTGCATCTTCTTAAGTTAGTCGGTAGCAATAAGAGGCCATCTATGGGGTATGTTTACGCTGGATTGTATCAGGCCAAAGCAGCAATCAAGAAAGAGCTGGTGAGGAAGAACGACTACATGGCTTACTGGGATATTATTGACTGGAGATGGAACAAGGATGCACCACGACCACTTCATTTAGCTGGTTTTTTCCTGAACCCATTATTTTTCGATGGTGTTCGAGGTGGAACATCAAGTGAGATATTCTCAGGTATGCTAGACTGCGTAGAAAGGTTGGTTTCTGATGTGAAAATCCAAGATAAAATCCAAAAGGAGCTCAATGTATACCGGAGTGAGGCAGCTGGGGATTTTCGTAGGCAAATGGCTATCCGAGCCAGGCACACTTTACCTCCTGCTGAATGGTGGTATACGTATGGAGGAGCTTGCCCAAATTTGACGCGTTTAGCAGTTCGCATTCTCAGTCAAACCTGCAGTGCTAAAGGATGTGACCGGAGACACATTTCTTTCGAACAAATTCATGACCAAAGAATGAATCTTTTTGAACGCCAGCGAATGCATCATCTCACATTTGTTCAGTACAATCTAAGGCTACAACACAGGCAACAACACAAGACCAAAGCATTTGATCCTGTCTCAGTCGACAACATTGACATAGTCGACGATTGGGTTGTGGATAGATCTGCACTTATATCTGGCCAGGCAGAGCAGTCAAACTGGACGGAGATTAACCAACCAGTCAACAATATCACATCAATGGGTCCAAGTGATGATGATGAATTCGAGTCCTTCATTGAAGGAGTTGATGACAAAATGATCCAAGGTGCTTCTCGGGGAACTCAGGAGGATGATGAATAACTCTGAGGAAGAGAGCCGTCACCTGTGCTTATAGGTGGAGTCATTACGATTGGGTAGTAGGGATGCTAGTTTTAGCTTGGATAGGATGTAAACTAATGTTGCATGGAGCCATGGACACAATCTGGCATTGCTTGTCAGTTGTCAACATTTTGCAAGTAGTTCTTTTTTCCTCGGCAACCAATCTAATGTC CTCTGTTTGGAACACAAGAAAGCCCGTTCAGTTCTCGTATGAATCAGAAGAATCCCTAGAACCATGGCCTGAACTGTCTCCATTTGTTGTCATCTTTTTGTTTGATACCTTGCTAATATTTGTCATGTTCATCTTTTGTTGTAAAAGCAGAACATTAGGACAGCATTTTTTTAGGTTTTCATTGTCTTTTTCCCATGATGAGA] [+] EMBL CB627709 [ TCGAGGAGACACCACCGGAGACCAGGGAGATGAAGGGGAGTATTAGCAAGAAGAGAAAGAAATTGGCTGCGAGGCAAGCCTCCACGGCGCCCCTTGCTCATCAGAATCAGCAGCCTCTTCAGTCTACTCCTGCTGGTCTGACCCAGCCTTTTCATCAGATGGTCGTGGCGTTTGATTCGGCTGCATCGCAACTGAGGCATTTTGACCAGCCCGGCTCGAACAAGGAGCAGGTTTATATGGCAATTGGGAGGTTCTTGTATGACGCTGGTGTGTCACTGGAGGCAGTGAATTCCGTTTACTTTCAGCCTATGCTTGAAGCTGTTGCCTCAGCAGGAGGGAAGCCTGAGGCGTTCTCGTATCACGACTTCCGTGGTTCCATATTGAAGAAGTCGCTGGATGAAGTGACTGCTCAGTTGGAGTTCTACAAGGGATCATGGACCCGGACAGGGTGCACATTGTTGGCCGATGAGTGGACTACTGACAGAGGCAGAACATTGATAAACTTCTCTGTGTATTGCCCGGAAGGTACTATGTTTCTGAAGTCAGTCGATGCAACCGACATTGTCGTGTCGTCAGATCCGCTGTATGAGTTGCTGAAGAATGTGGTTGAGGAAGTTGGTGAGAAAAATGTTGTCCAAGTAATCACAAACAATTCTGAGATTCATGCGGTGGCAGGAAAGAGGCTATGCGAAACTTTTCCTACATTGTTCTGGTCTCAATGCTCTTTCCAGTGCATCGATGGGATGCTTGAAGATTTCAGTAAGGTGGGGGCAATCAATGAGATCATATGTAATGCGAAGGTCATTACGGGATTTTATCTAT ACAGCGCATTTGCATTTAACTTGATGAAAAag ] [-] EMBL CB627710 [ GATGGTGTTCGAGGTGGAACATCAAGTGAGATATTCTCAGGAATGCTAGACTGCATAGAAAGGTTGGTTTCTGATGTGAAAATCCAAGATAAAATCCAAAAGGAGCTCAATGTATACCGGAGTGAGGCAGCTGGGGATTTTCGTAGGCAAATGGCTATCCGAGCCAGGCGCACTTTACCTCCTGCTGAATGGTGGTATACGTATGGAGGAGCTTGCCCAAATTTGACGCGTTTAGCAGTTCGCATTCTCAGTCAAACCTGCAGTGCTAAAGGATGTGACCGGAGACACATTTCTTTCGAACAAATTCATGACCAAAGAATGAATCTTTTTGAACGCCAGCGAATGCATCATCTCACATTTGTTCAGTACAATCTAAGGCTACAACACAGGCAACAACACAAGACCAAAGCATTTGATCCTGTCTCAGTCGACAACATTGACATAGTCGACGATTGGGTTGTGGATAGATCTGCACTTATATCTGGCCAGGCAGAGCAGTCAAACTGGACGGAGATTAACCAACCAGTCAACAATATCACATCAATGGGTCCAAGTGATGATGATGAATTCGAGTCCTTCATTGAAGGAGTTGATGACAAAATGATCCAAGGTGCTTCTCGGGGAACTCAGGAGGATGATGAATAACTCTGAGGAAGAGAGCCGTCACCTGTGCTTATAGGTGGAGTCATTACGATTGGGTAGTAGGGATGCTAGTTTTAGCTTGGATAGGATGTAAACTAATGTTGCATGGAGCCATGGACACAATCTGGCATTGCTTGTCAGTTGTCAACATTATGGAAGTAGTTCTTTTTTCCTCGGCAACCAATCTAATGTCAATC GGTTGGAA ] [-] EMBL CB628048 [ anAATCCAAGATAAAATCCAAAAGGAGCTCAATGTATACCGGAGTGAGGCAGCTGGGGATTTTCGTAGGCAAATGGCTATCCGAGCCAGGCGCACTTTACCTCCTGCTGAATGGTGGTATACGTATGGAGGAGCTTGCCCAAATTTGACGCGTTTAGCAGTTCGCATTCTCAGTCAAACCTGCAGTGCTAAAGGATGTGACCGGAGACACATTTCTTTCGAACAAATTCATGACCAAAGAATGAATCTTTTTGAACGCCAGCGAATGCATCATCTCACATTTGTTCAGTACAATCTAAGGCTACAACACAGGCAACAACACAAGACCAAAGCATTTGATCCTGTCTCAGTCGACAACATTGACATAGTCGACGATTGGGTTGTGGATAGATCTGCACTTATATCTGGCCAGGCAGAGCAGTCAAACTGGACGGAGATTAACCAACCAGTCAACAATATCACATCAATGGGTCCAAGTGATGATGATGAATTCGAGTCCTTCATTGAAGGAGTTGATGACAAAATGATCCAAGGTGCTTCTCGGGGAACTCAGGAGGATGATGAATAACTCTGAGGAAGAGAGCCGTCACCTGTGCTTATAGGTGGAGTCATTACGATTGGGTAGTAGGGATGCTAGTTTTAGCTTGGATAGGATGTAAACTAATGTTGCATGGAGCCATGGACACAATCTGGCATTGCTTGTCAGTTGTCAACATTTTGCAAGTAGTTCTTTTTTCCTCGGCAACCAATCTAATGTC CTCTGTTTGGAACACAAGAAAGCCCGTTCAGTTCTCGTATGAATCAGAAGAATCCCTAGAAC ] [-] EMBL CB628047 [ ACGTATGGAGGAGCTTGCCCAAATTTGACGCGTTTAGCAGTTCGCATTTTCAGTCAAACTTGCAGTGCTAAAGGATGTGACCGGAGACACATTTCTTTGGAACAAATTCATGACCAAAGAATGAATCTTTTTGAACGCCAGCGAATGCATCATCTCACATTTGTTCAGTACAATGTAAGGCTACAACACAGGCAACAACACAAGACCAAAGCATTTGATCCTGTCTCAGTCGACAACATTGACATAGTCGACGATTGGGTTGTGGATAGATCTGCACTTATATCTGGCCAGGCAGAGCAGTCAAACTGGACGGAGATTAACCAACCAGTCAACAATATCACATCAATGGGTCCAAGTGATGATGATGAATTGGAGTCCTTCATTGAAGGAGTTGATGACAAAATGATCCAAGGTGCTTCTCGGGGAATTCAGGAGGATGATGAATAACTTTGAGGAAGAGACCCGTCACCCGTGCTTATAGGTGGAGTCATTCCGTTTGGCTATTAGGGATGCTAGTTTTATCTTTGATAGGA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||