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Oryza sativa
cluster # 8293 cluster # 8293       Sequences # 5       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8293#0 length = 2035 sequences # 3  
consensus_8293#1 length = 673 sequences # 1  
consensus_8293#2 length = 545 sequences # 1  

consensusID : consensus_8293#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2035
fasta sequence
                              [TACCTATCCATCTAAAATCTGATTACACATTTGCCCATTAAATTCTACTATGCACAACAAGAAGCCACGAATTCTACTATGCACAACAAGAAGCCACGACTGTGCTCTTAATTCAAATCTGAATTTGTTAGGACATATTATTGACGTATAACCACATAAATAAATCCAAAGTATATATAATATTTTTGTTTCCCCATTTCAAGGTCTATATGATCTTACTTATTTGGTTTTGGTCCGCATACTGGTAGTATGCCTGAGAGTGGTTATATTGATGACTGATAAGAGAATGACAAGTCAATATCTTGCTTTGATACCTTTTTTTTTGCATTTTTGATTTAGCTAAAAATAACTATGTACTGATAATGGTTATTTTTATTGTTACAAATTCCAATTACATGAGGATATGTTTTATAAATTTTGGGTAAATAGGTTGTGCTTCAGAAGGTGTAGTTTCTAAAATTTTTAGTGCAATTATGTACTCGGGCGATATATTTTGTCAAAAAACGTGCATTGCACGTGAGTATTAGTAGTGTGTTACTGTGTTACAGTCCATTGCATAGACCATTGGGCACACACACGCTGATAAGCACAAGATCCAAAAGCAAGTAACCGCCCATGGTATACTATGCATGTACGAGGCCGACAAAAGGGAAAGCAAGCCGGTGATGCGCGTGAACACTGCGGCATAGCGACAAGGCCACCTGTCCGCCATGGCATTCATGATTCATGGCCGTCCCTCCCCCTGCGAGATTCCCCCACTCACTTGCTCACACACCAAAGAAGCTACTGGGGCAGGTGTGTCCATTGAATTGAATTGAATTGAAACTATTGATGAATGAATTCACCAGCCAGCTAGAACCTTCCTTGAAACCAGCCATAAATCACACCCATTCATCTCTCTCAACTCTCTGCAGCCCATTCACTGCACCAGTGTAGTAGCAGTGCTGCAGTTGCTTTGAACACTCATCTCCTTACCGTG-TTTGTT-AGAGCTCAAAAGGA-TCAAGAGAAGATGA-GGGTTCTTCCTCTTCGTGCC-ACCACGGCTCTCCTGGCCACCCTCC-TGGTCGCCGCCTCGTTCCAGGATCTCACCGTCGCTGCAGACGGCGGCGGCGGCGTGGTTCCGGTCCCGGATAGCGTGTGCGACGCCAAGTGCCAGAAGCGGTGCTCGCTGAAGGTGGCCGGGCGGTGCATGGGGCTGTGCAAGATGTGCTGCCACGACTGCGGCGGCTGCGTGCCGTCGGGGCCGTACGCCAGCAAGGACGAGTGCCCCTGCTACCGCGACATGGTCTCCCCCAAGAGCCGACGGCCCAAGTGCCCGTGAGCAACGAGAGATGGCTGGCACTGTGACGATGTGTAGCCGATCCGTGGTAGTAGTGTGATTGATAGCGTTGGGATCGATCTCGGTTCTTTGAGAAGTGTTAGTGCTTAGTGGAATAAAACAAGAATGTCTGTCTAAGATATGTCTTGTGCTTTGTCCAGAGTATGCTCTGATATCGCTCTGATATCTAGGCCGAGTTTAGTTCCAAATTTTTTCTTCAAACTTTCAACTTTTTTATCACATCAAAACTTTCCTACAACACAAATTTCTAATTTTTCCATTATATCGTTCCAATTTCAACCAAATTTCCAATTTTAGCGTGAACTAAACACACAAGTTACTTTTGATTATTTTTTTTAAGCAACAGAATTGAGAATGAGGGTGTGTTTAGTTCACGCTAAAATTGAAAGTTTTATTGAGATTGGAACGATGTAACGGAAAAGTTAGAAGTTTATGTATATAGAAAATTAAAGTTCTGATGTGATGGAAAACTTGGAGGTTTAAAGAAAAAGTTGGGAACTAAACCAGACCTGGATCATCTGGCTCGAGCAGGGGCGGAGCTAGTATATATTAGGGGGGTGCCCAGAAACCTGGTCAAGAAAATTTTTTAGCTATACCTCATCTATTTTCATCATGTATGTACCCTCTAAATACAAACTTAGGCATCCGCATCAGCTTAAACTTGATCTAAAGTAGAGTAAATTAAACAAGTGACACCAC]

[+] EMBL AK107438             [TACCTATCCATCTAAAATCTGATTACACATTTGCCCATTAAATTCTACTATGCACAACAAGAAGCCACGAATTCTACTATGCACAACAAGAAGCCACGACTGTGCTCTTAATTCAAATCTGAATTTGTTAGGACATATTATTGACGTATAACCACATAAATAAATCCAAAGTATATATAATATTTTTGTTTCCCCATTTCAAGGTCTATATGATCTTACTTATTTGGTTTTGGTCCGCATACTGGTAGTATGCCTGAGAGTGGTTATATTGATGACTGATAAGAGAATGACAAGTCAATATCTTGCTTTGATACCTTTTTTTTTGCATTTTTGATTTAGCTAAAAATAACTATGTACTGATAATGGTTATTTTTATTGTTACAAATTCCAATTACATGAGGATATGTTTTATAAATTTTGGGTAAATAGGTTGTGCTTCAGAAGGTGTAGTTTCTAAAATTTTTAGTGCAATTATGTACTCGGGCGATATATTTTGTCAAAAAACGTGCATTGCACGTGAGTATTAGTAGTGTGTTACTGTGTTACAGTCCATTGCATAGACCATTGGGCACACACACGCTGATAAGCACAAGATCCAAAAGCAAGTAACCGCCCATGGTATACTATGCATGTACGAGGCCGACAAAAGGGAAAGCAAGCCGGTGATGCGCGTGAACACTGCGGCATAGCGACAAGGCCACCTGTCCGCCATGGCATTCATGATTCATGGCCGTCCCTCCCCCTGCGAGATTCCCCCACTCACTTGCTCACACACCAAAGAAGCTACTGGGGCAGGTGTGTCCATTGAATTGAATTGAATTGAAACTATTGATGAATGAATTCACCAGCCAGCTAGAACCTTCCTTGAAACCAGCCATAAATCACACCCATTCATCTCTCTCAACTCTCTGCAGCCCATTCACTGCACCAGTGTAGTAGCAGAGCTGCAGTTGCTTTGAACACTCATCTCCTCACCGTG TTTGTT AGAGCTCAAAAGGA TCAAGAGAAGATGA GGGTTCCTCCTCTTCGTGCC ACCACGGCTCTCCTGGCCACCCTCC TGGTCGCCGCCTCGTTCCAGGATCTCACCGTCGCTGCAGACGGCGGCGGCGGCGTGGTTCCGGTCCCGGATAGCGTGTGCGACGCCAAGTGCCAGAAGCGGTGCTCGCTGAAGGTGGCCGGGCGGTGCATGGGGCTGTGCAAGATGTGCTGCCACGACTGCGGCGGCTGCGTGCCGTCGGGGCCGTACGCCAGCAAGGACGAGTGCCCCTGCTACCGCGACATGGTCTCCCCCAAGAGCCGACGGCCCAAGTGCCCGTGAGCAACGAGAGATGGCTGGCACTGTGACGATGTGTAGCCGATCCGTGGTAGTAGTGTGATTGATAGCGTTGGGATCGATCTCGGTTCTTTGAGAAGTGTTAGTGCTTAGTGGAATAAAACAAGAATGTCTGTCTAAGATATGTCTTGTGCTTTGTCCAGAGTATGCTCTGATATCGCTCTGATATCTAGGCCGAGTTTAGTTCCAAATTTTTTCTTCAAACTTTCAACTTTTTTATCACATCAAAACTTTCCTACAACACAAATTTCTAATTTTTCCATTATATCGTTCCAATTTCAACCAAATTTCCAATTTTAGCGTGAACTAAACACACAAGTTACTTTTGATTATTTTTTTTAAGCAACAGAATTGAGAATGAGGGTGTGTTTAGTTCACGCTAAAATTGAAAGTTTTATTGAGATTGGAACGATGTAACGGAAAAGTTAGAAGTTTATGTATATAGAAAATTAAAGTTCTGATGTGATGGAAAACTTGGAGGTTTAAAGAAAAAGTTGGGAACTAAACCAGACCTGGATCATCTGGCTCGAGCAGGGGCGGAGCTAGTATATATTAGGGGGGTGCCCAGAAACCTGGTCAAGAAAATTTTTTAGCTATACCTCATCTATTTTCATCATGTATGTACCCTCTAAATACAAACTTAGGCATCCGCATCAGCTTAAACTTGATCTAAAGTAGAGTAAATTAAACAAGTGACACCAC]
[+] EMBL AA750078             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ACCAGCTATAAATCACACCCATTCATCTCTCTCANCTCTCTGCAGCCCATTCACTGCACCAGTGTAGTAGCAGTGCTGCAGTTGCTTTGAACACTCATCTCCTTACCGTG TTTGTT AGAGCTCAAAAGGA TCAAGAGAAGAT A GGGTTCTTCCTCTNNG   C ACCACGGCTtct                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AA752514             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      cgagCTGCACCAGTGTAGTAGCAGTGCTGCAGTTGCTTTGAACACTCATCTCCTTACCGTGTTTTGTTAAGAGCTCAAAAGGAWTCAAGAGAAGATGAGGGGTTCTTCCTCTTCGTGCCAACAACGGBTHTHCTGGCCACCCTCCTTGGTCGCCGCCTCGTTCCAGGATCTCACCGTCGCTGCAGACGGCGGCGGv                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]


>consensus_8293#0 TACCTATCCATCTAAAATCTGATTACACATTTGCCCATTAAATTCTACTATGCACAACAA GAAGCCACGAATTCTACTATGCACAACAAGAAGCCACGACTGTGCTCTTAATTCAAATCT GAATTTGTTAGGACATATTATTGACGTATAACCACATAAATAAATCCAAAGTATATATAA TATTTTTGTTTCCCCATTTCAAGGTCTATATGATCTTACTTATTTGGTTTTGGTCCGCAT ACTGGTAGTATGCCTGAGAGTGGTTATATTGATGACTGATAAGAGAATGACAAGTCAATA TCTTGCTTTGATACCTTTTTTTTTGCATTTTTGATTTAGCTAAAAATAACTATGTACTGA TAATGGTTATTTTTATTGTTACAAATTCCAATTACATGAGGATATGTTTTATAAATTTTG GGTAAATAGGTTGTGCTTCAGAAGGTGTAGTTTCTAAAATTTTTAGTGCAATTATGTACT CGGGCGATATATTTTGTCAAAAAACGTGCATTGCACGTGAGTATTAGTAGTGTGTTACTG TGTTACAGTCCATTGCATAGACCATTGGGCACACACACGCTGATAAGCACAAGATCCAAA AGCAAGTAACCGCCCATGGTATACTATGCATGTACGAGGCCGACAAAAGGGAAAGCAAGC CGGTGATGCGCGTGAACACTGCGGCATAGCGACAAGGCCACCTGTCCGCCATGGCATTCA TGATTCATGGCCGTCCCTCCCCCTGCGAGATTCCCCCACTCACTTGCTCACACACCAAAG AAGCTACTGGGGCAGGTGTGTCCATTGAATTGAATTGAATTGAAACTATTGATGAATGAA TTCACCAGCCAGCTAGAACCTTCCTTGAAACCAGCCATAAATCACACCCATTCATCTCTC TCAACTCTCTGCAGCCCATTCACTGCACCAGTGTAGTAGCAGTGCTGCAGTTGCTTTGAA CACTCATCTCCTTACCGTGTTTGTTAGAGCTCAAAAGGATCAAGAGAAGATGAGGGTTCT TCCTCTTCGTGCCACCACGGCTCTCCTGGCCACCCTCCTGGTCGCCGCCTCGTTCCAGGA TCTCACCGTCGCTGCAGACGGCGGCGGCGGCGTGGTTCCGGTCCCGGATAGCGTGTGCGA CGCCAAGTGCCAGAAGCGGTGCTCGCTGAAGGTGGCCGGGCGGTGCATGGGGCTGTGCAA GATGTGCTGCCACGACTGCGGCGGCTGCGTGCCGTCGGGGCCGTACGCCAGCAAGGACGA GTGCCCCTGCTACCGCGACATGGTCTCCCCCAAGAGCCGACGGCCCAAGTGCCCGTGAGC AACGAGAGATGGCTGGCACTGTGACGATGTGTAGCCGATCCGTGGTAGTAGTGTGATTGA TAGCGTTGGGATCGATCTCGGTTCTTTGAGAAGTGTTAGTGCTTAGTGGAATAAAACAAG AATGTCTGTCTAAGATATGTCTTGTGCTTTGTCCAGAGTATGCTCTGATATCGCTCTGAT ATCTAGGCCGAGTTTAGTTCCAAATTTTTTCTTCAAACTTTCAACTTTTTTATCACATCA AAACTTTCCTACAACACAAATTTCTAATTTTTCCATTATATCGTTCCAATTTCAACCAAA TTTCCAATTTTAGCGTGAACTAAACACACAAGTTACTTTTGATTATTTTTTTTAAGCAAC AGAATTGAGAATGAGGGTGTGTTTAGTTCACGCTAAAATTGAAAGTTTTATTGAGATTGG AACGATGTAACGGAAAAGTTAGAAGTTTATGTATATAGAAAATTAAAGTTCTGATGTGAT GGAAAACTTGGAGGTTTAAAGAAAAAGTTGGGAACTAAACCAGACCTGGATCATCTGGCT CGAGCAGGGGCGGAGCTAGTATATATTAGGGGGGTGCCCAGAAACCTGGTCAAGAAAATT TTTTAGCTATACCTCATCTATTTTCATCATGTATGTACCCTCTAAATACAAACTTAGGCA TCCGCATCAGCTTAAACTTGATCTAAAGTAGAGTAAATTAAACAAGTGACACCAC



consensusID : consensus_8293#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 673
fasta sequence
                              [TTCACTGCACCAGTGTAGTAGCAGTGCTGCAGTTGCTTTGAACANCTCATCTCCTCACCGTGTTTGTTAGAGCTCAAAAGGATCAAGAGAAGATGAGGGTTCCTCCTCTTCGTGCCACCACGGCTCTCCTGGCCACCCTCCTGGTCGCCGCCTCGTTCCAGGATCTCACCGTCGCTGCAGACGGCGGCGGCGGCGTGGCTCCGGTCCCGGATAGCGTGTGCGACGCCAAGTGCCAGAAGCGGTGCTCGCTGAAGGTGGCCGGGCGGTGCATGGGGCTGTGCAAGATGTGCTGCCACGACTGCGGCGGCTGCGTGCCGTCGGGGCCGTACGCCAGCAAGGACGAGTGCCCCTGCTACCGCGACATGGTCTCCCCCAAGAGCCGACGGCCCAAGTGCCCGTGAGCAACGAGAGATGGCTGGCACTGTGACGATGTGTAGCCGATCCGTGGTAGTAGTGTGATTGATAGCGTTGGGATCGATCTCGGTTCTTTGAGAAGTGTTAGTGCTTAGTGGAATAAAACAAGAATGTCTGTCTAACATACAATAATACTAGATAGTGATATAGTATAGATAGACGGTTTTGAATATCTGTGGGGCCGCCTTGGCCCATTTGATTCTAAATTGAACCAGGCTTTTGCTTGCGGCCGAATATTCAGCTTCCTTGGCCAATCCGC]

[+] EMBL BI892456             [TTCACTGCACCAGTGTAGTAGCAGTGCTGCAGTTGCTTTGAACANCTCATCTCCTCACCGTGTTTGTTAGAGCTCAAAAGGATCAAGAGAAGATGAGGGTTCCTCCTCTTCGTGCCACCACGGCTCTCCTGGCCACCCTCCTGGTCGCCGCCTCGTTCCAGGATCTCACCGTCGCTGCAGACGGCGGCGGCGGCGTGGCTCCGGTCCCGGATAGCGTGTGCGACGCCAAGTGCCAGAAGCGGTGCTCGCTGAAGGTGGCCGGGCGGTGCATGGGGCTGTGCAAGATGTGCTGCCACGACTGCGGCGGCTGCGTGCCGTCGGGGCCGTACGCCAGCAAGGACGAGTGCCCCTGCTACCGCGACATGGTCTCCCCCAAGAGCCGACGGCCCAAGTGCCCGTGAGCAACGAGAGATGGCTGGCACTGTGACGATGTGTAGCCGATCCGTGGTAGTAGTGTGATTGATAGCGTTGGGATCGATCTCGGTTCTTTGAGAAGTGTTAGTGCTTAGTGGAATAAAACAAGAATGTCTGTCTAACATACAATAATACTAGATAGTGATATAGTATAGATAGACGGTTTTGAATATCTGTGGGGCCGCCTTGGCCCATTTGATTCTAAATTGAACCAGGCTTTTGCTTGCGGCCGAATATTCAGCTTCCTTGGCCAATCCGC]


>consensus_8293#1 TTCACTGCACCAGTGTAGTAGCAGTGCTGCAGTTGCTTTGAACANCTCATCTCCTCACCG TGTTTGTTAGAGCTCAAAAGGATCAAGAGAAGATGAGGGTTCCTCCTCTTCGTGCCACCA CGGCTCTCCTGGCCACCCTCCTGGTCGCCGCCTCGTTCCAGGATCTCACCGTCGCTGCAG ACGGCGGCGGCGGCGTGGCTCCGGTCCCGGATAGCGTGTGCGACGCCAAGTGCCAGAAGC GGTGCTCGCTGAAGGTGGCCGGGCGGTGCATGGGGCTGTGCAAGATGTGCTGCCACGACT GCGGCGGCTGCGTGCCGTCGGGGCCGTACGCCAGCAAGGACGAGTGCCCCTGCTACCGCG ACATGGTCTCCCCCAAGAGCCGACGGCCCAAGTGCCCGTGAGCAACGAGAGATGGCTGGC ACTGTGACGATGTGTAGCCGATCCGTGGTAGTAGTGTGATTGATAGCGTTGGGATCGATC TCGGTTCTTTGAGAAGTGTTAGTGCTTAGTGGAATAAAACAAGAATGTCTGTCTAACATA CAATAATACTAGATAGTGATATAGTATAGATAGACGGTTTTGAATATCTGTGGGGCCGCC TTGGCCCATTTGATTCTAAATTGAACCAGGCTTTTGCTTGCGGCCGAATATTCAGCTTCC TTGGCCAATCCGC



consensusID : consensus_8293#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 545
fasta sequence
                              [TAGCAGTGCTGCAGTTGCTTTGAACACTCATCTCCTTACCGTGTTTGTTAGAGCTCAAAAGGATCAAGAGAAGATGAGGGTTCTTCCTCTTCGTGCCACCACGGCTCTCCTGGCCACCCTCCTGGTCGCCGCCTCGTTCCAGGATCTCACCGTCGCTGCAGACGGCGGCGGCGGCGTGGTTCCGGTCCCGGATAGCGTGTGCGACGCCAAGTGCCAGAAGCGGTGCTCGCTGAAGGTGGCCGGGCGGTGCATGGGGCTGTGCAAGATGTGCTGCCACGACTGCGGCGGCTGCGTGCCGTCGGGGCCGTACGCCAGCAAGGACGAGTGCCCCTGCTACCGCGACATGGTCTCCCCCAAGAGCCGACGCCCCAAGTGCCCGTGAGCAACGAGAGATGGCTGGCACTGTGACGATGTGTAGCCGATCCGTGGTAGTAGTGGGATTGATAGCGTTGGGATCGATCTCGGTTCTTTGAGAAGTGTTAGTGCTTAGTGGAATAAAACAAGAATGTCTGTCTAAAAAAAAAAAAAAAAAAAAAAACTCGAGA]

[+] EMBL CA757771             [TAGCAGTGCTGCAGTTGCTTTGAACACTCATCTCCTTACCGTGTTTGTTAGAGCTCAAAAGGATCAAGAGAAGATGAGGGTTCTTCCTCTTCGTGCCACCACGGCTCTCCTGGCCACCCTCCTGGTCGCCGCCTCGTTCCAGGATCTCACCGTCGCTGCAGACGGCGGCGGCGGCGTGGTTCCGGTCCCGGATAGCGTGTGCGACGCCAAGTGCCAGAAGCGGTGCTCGCTGAAGGTGGCCGGGCGGTGCATGGGGCTGTGCAAGATGTGCTGCCACGACTGCGGCGGCTGCGTGCCGTCGGGGCCGTACGCCAGCAAGGACGAGTGCCCCTGCTACCGCGACATGGTCTCCCCCAAGAGCCGACGCCCCAAGTGCCCGTGAGCAACGAGAGATGGCTGGCACTGTGACGATGTGTAGCCGATCCGTGGTAGTAGTGGGATTGATAGCGTTGGGATCGATCTCGGTTCTTTGAGAAGTGTTAGTGCTTAGTGGAATAAAACAAGAATGTCTGTCTAAAAAAAAAAAAAAAAAAAAAAACTCGAGA]


>consensus_8293#2 TAGCAGTGCTGCAGTTGCTTTGAACACTCATCTCCTTACCGTGTTTGTTAGAGCTCAAAA GGATCAAGAGAAGATGAGGGTTCTTCCTCTTCGTGCCACCACGGCTCTCCTGGCCACCCT CCTGGTCGCCGCCTCGTTCCAGGATCTCACCGTCGCTGCAGACGGCGGCGGCGGCGTGGT TCCGGTCCCGGATAGCGTGTGCGACGCCAAGTGCCAGAAGCGGTGCTCGCTGAAGGTGGC CGGGCGGTGCATGGGGCTGTGCAAGATGTGCTGCCACGACTGCGGCGGCTGCGTGCCGTC GGGGCCGTACGCCAGCAAGGACGAGTGCCCCTGCTACCGCGACATGGTCTCCCCCAAGAG CCGACGCCCCAAGTGCCCGTGAGCAACGAGAGATGGCTGGCACTGTGACGATGTGTAGCC GATCCGTGGTAGTAGTGGGATTGATAGCGTTGGGATCGATCTCGGTTCTTTGAGAAGTGT TAGTGCTTAGTGGAATAAAACAAGAATGTCTGTCTAAAAAAAAAAAAAAAAAAAAAAACT CGAGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8293#1      ------------------------------------------------------------
consensus_8293#2      ------------------------------------------------------------
consensus_8293#0      TACCTATCCATCTAAAATCTGATTACACATTTGCCCATTAAATTCTACTATGCACAACAA 60
                                                                                  

consensus_8293#1      ------------------------------------------------------------
consensus_8293#2      ------------------------------------------------------------
consensus_8293#0      GAAGCCACGAATTCTACTATGCACAACAAGAAGCCACGACTGTGCTCTTAATTCAAATCT 120
                                                                                  

consensus_8293#1      ------------------------------------------------------------
consensus_8293#2      ------------------------------------------------------------
consensus_8293#0      GAATTTGTTAGGACATATTATTGACGTATAACCACATAAATAAATCCAAAGTATATATAA 180
                                                                                  

consensus_8293#1      ------------------------------------------------------------
consensus_8293#2      ------------------------------------------------------------
consensus_8293#0      TATTTTTGTTTCCCCATTTCAAGGTCTATATGATCTTACTTATTTGGTTTTGGTCCGCAT 240
                                                                                  

consensus_8293#1      ------------------------------------------------------------
consensus_8293#2      ------------------------------------------------------------
consensus_8293#0      ACTGGTAGTATGCCTGAGAGTGGTTATATTGATGACTGATAAGAGAATGACAAGTCAATA 300
                                                                                  

consensus_8293#1      ------------------------------------------------------------
consensus_8293#2      ------------------------------------------------------------
consensus_8293#0      TCTTGCTTTGATACCTTTTTTTTTGCATTTTTGATTTAGCTAAAAATAACTATGTACTGA 360
                                                                                  

consensus_8293#1      ------------------------------------------------------------
consensus_8293#2      ------------------------------------------------------------
consensus_8293#0      TAATGGTTATTTTTATTGTTACAAATTCCAATTACATGAGGATATGTTTTATAAATTTTG 420
                                                                                  

consensus_8293#1      ------------------------------------------------------------
consensus_8293#2      ------------------------------------------------------------
consensus_8293#0      GGTAAATAGGTTGTGCTTCAGAAGGTGTAGTTTCTAAAATTTTTAGTGCAATTATGTACT 480
                                                                                  

consensus_8293#1      ------------------------------------------------------------
consensus_8293#2      ------------------------------------------------------------
consensus_8293#0      CGGGCGATATATTTTGTCAAAAAACGTGCATTGCACGTGAGTATTAGTAGTGTGTTACTG 540
                                                                                  

consensus_8293#1      ------------------------------------------------------------
consensus_8293#2      ------------------------------------------------------------
consensus_8293#0      TGTTACAGTCCATTGCATAGACCATTGGGCACACACACGCTGATAAGCACAAGATCCAAA 600
                                                                                  

consensus_8293#1      ------------------------------------------------------------
consensus_8293#2      ------------------------------------------------------------
consensus_8293#0      AGCAAGTAACCGCCCATGGTATACTATGCATGTACGAGGCCGACAAAAGGGAAAGCAAGC 660
                                                                                  

consensus_8293#1      ------------------------------------------------------------
consensus_8293#2      ------------------------------------------------------------
consensus_8293#0      CGGTGATGCGCGTGAACACTGCGGCATAGCGACAAGGCCACCTGTCCGCCATGGCATTCA 720
                                                                                  

consensus_8293#1      ------------------------------------------------------------
consensus_8293#2      ------------------------------------------------------------
consensus_8293#0      TGATTCATGGCCGTCCCTCCCCCTGCGAGATTCCCCCACTCACTTGCTCACACACCAAAG 780
                                                                                  

consensus_8293#1      ------------------------------------------------------------
consensus_8293#2      ------------------------------------------------------------
consensus_8293#0      AAGCTACTGGGGCAGGTGTGTCCATTGAATTGAATTGAATTGAAACTATTGATGAATGAA 840
                                                                                  

consensus_8293#1      ------------------------------------------------------------
consensus_8293#2      ------------------------------------------------------------
consensus_8293#0      TTCACCAGCCAGCTAGAACCTTCCTTGAAACCAGCCATAAATCACACCCATTCATCTCTC 900
                                                                                  

consensus_8293#1      ------------------TTCACTGCACCAGTGTAGTAGCAGTGCTGCAGTTGCTTTGAA 42
consensus_8293#2      ------------------------------------TAGCAGTGCTGCAGTTGCTTTGAA 24
consensus_8293#0      TCAACTCTCTGCAGCCCATTCACTGCACCAGTGTAGTAGCAGTGCTGCAGTTGCTTTGAA 960
                                                          ************************

consensus_8293#1      CANCTCATCTCCTCACCGTGTTTGTTAGAGCTCAAAAGGATCAAGAGAAGATGAGGGTTC 102
consensus_8293#2      CAC-TCATCTCCTTACCGTGTTTGTTAGAGCTCAAAAGGATCAAGAGAAGATGAGGGTTC 83
consensus_8293#0      CAC-TCATCTCCTTACCGTGTTTGTTAGAGCTCAAAAGGATCAAGAGAAGATGAGGGTTC 1019
                      **  ********* **********************************************

consensus_8293#1      CTCCTCTTCGTGCCACCACGGCTCTCCTGGCCACCCTCCTGGTCGCCGCCTCGTTCCAGG 162
consensus_8293#2      TTCCTCTTCGTGCCACCACGGCTCTCCTGGCCACCCTCCTGGTCGCCGCCTCGTTCCAGG 143
consensus_8293#0      TTCCTCTTCGTGCCACCACGGCTCTCCTGGCCACCCTCCTGGTCGCCGCCTCGTTCCAGG 1079
                       ***********************************************************

consensus_8293#1      ATCTCACCGTCGCTGCAGACGGCGGCGGCGGCGTGGCTCCGGTCCCGGATAGCGTGTGCG 222
consensus_8293#2      ATCTCACCGTCGCTGCAGACGGCGGCGGCGGCGTGGTTCCGGTCCCGGATAGCGTGTGCG 203
consensus_8293#0      ATCTCACCGTCGCTGCAGACGGCGGCGGCGGCGTGGTTCCGGTCCCGGATAGCGTGTGCG 1139
                      ************************************ ***********************

consensus_8293#1      ACGCCAAGTGCCAGAAGCGGTGCTCGCTGAAGGTGGCCGGGCGGTGCATGGGGCTGTGCA 282
consensus_8293#2      ACGCCAAGTGCCAGAAGCGGTGCTCGCTGAAGGTGGCCGGGCGGTGCATGGGGCTGTGCA 263
consensus_8293#0      ACGCCAAGTGCCAGAAGCGGTGCTCGCTGAAGGTGGCCGGGCGGTGCATGGGGCTGTGCA 1199
                      ************************************************************

consensus_8293#1      AGATGTGCTGCCACGACTGCGGCGGCTGCGTGCCGTCGGGGCCGTACGCCAGCAAGGACG 342
consensus_8293#2      AGATGTGCTGCCACGACTGCGGCGGCTGCGTGCCGTCGGGGCCGTACGCCAGCAAGGACG 323
consensus_8293#0      AGATGTGCTGCCACGACTGCGGCGGCTGCGTGCCGTCGGGGCCGTACGCCAGCAAGGACG 1259
                      ************************************************************

consensus_8293#1      AGTGCCCCTGCTACCGCGACATGGTCTCCCCCAAGAGCCGACGGCCCAAGTGCCCGTGAG 402
consensus_8293#2      AGTGCCCCTGCTACCGCGACATGGTCTCCCCCAAGAGCCGACGCCCCAAGTGCCCGTGAG 383
consensus_8293#0      AGTGCCCCTGCTACCGCGACATGGTCTCCCCCAAGAGCCGACGGCCCAAGTGCCCGTGAG 1319
                      ******************************************* ****************

consensus_8293#1      CAACGAGAGATGGCTGGCACTGTGACGATGTGTAGCCGATCCGTGGTAGTAGTGTGATTG 462
consensus_8293#2      CAACGAGAGATGGCTGGCACTGTGACGATGTGTAGCCGATCCGTGGTAGTAGTGGGATTG 443
consensus_8293#0      CAACGAGAGATGGCTGGCACTGTGACGATGTGTAGCCGATCCGTGGTAGTAGTGTGATTG 1379
                      ****************************************************** *****

consensus_8293#1      ATAGCGTTGGGATCGATCTCGGTTCTTTGAGAAGTGTTAGTGCTTAGTGGAATAAAACAA 522
consensus_8293#2      ATAGCGTTGGGATCGATCTCGGTTCTTTGAGAAGTGTTAGTGCTTAGTGGAATAAAACAA 503
consensus_8293#0      ATAGCGTTGGGATCGATCTCGGTTCTTTGAGAAGTGTTAGTGCTTAGTGGAATAAAACAA 1439
                      ************************************************************

consensus_8293#1      GAATGTCTGTCTAACATACAA-TAATACT------AGATAGTGATATAGTATAGATAGAC 575
consensus_8293#2      GAATGTCTGTCTAAAAAAAAA-AAAAA--------AAAAAAAAACTCGAGA--------- 545
consensus_8293#0      GAATGTCTGTCTAAGATATGTCTTGTGCTTTGTCCAGAGTATGCTCTGATATCGCTCTGA 1499
                      ************** * *                 * *            *         

consensus_8293#1      GGTTTTGAATATCTGTGGGGCCGCCTTGGCCCATTTGATTCTAAA---TTGAACCAGGCT 632
consensus_8293#2      ------------------------------------------------------------
consensus_8293#0      TATCTAGGCCGAGTTTAGTTCCAAATTTTTTCTTCAAACTTTCAACTTTTTTATCACATC 1559
                                                                                  

consensus_8293#1      ----TTTGCTTGCGGCCGAATATTCAGCTTCCTTGGCCAATCCGC--------------- 673
consensus_8293#2      ------------------------------------------------------------
consensus_8293#0      AAAACTTTCCTACAACACAAATTTCTAATTTTTCCATTATATCGTTCCAATTTCAACCAA 1619
                                                                                  

consensus_8293#1      ------------------------------------------------------------
consensus_8293#2      ------------------------------------------------------------
consensus_8293#0      ATTTCCAATTTTAGCGTGAACTAAACACACAAGTTACTTTTGATTATTTTTTTTAAGCAA 1679
                                                                                  

consensus_8293#1      ------------------------------------------------------------
consensus_8293#2      ------------------------------------------------------------
consensus_8293#0      CAGAATTGAGAATGAGGGTGTGTTTAGTTCACGCTAAAATTGAAAGTTTTATTGAGATTG 1739
                                                                                  

consensus_8293#1      ------------------------------------------------------------
consensus_8293#2      ------------------------------------------------------------
consensus_8293#0      GAACGATGTAACGGAAAAGTTAGAAGTTTATGTATATAGAAAATTAAAGTTCTGATGTGA 1799
                                                                                  

consensus_8293#1      ------------------------------------------------------------
consensus_8293#2      ------------------------------------------------------------
consensus_8293#0      TGGAAAACTTGGAGGTTTAAAGAAAAAGTTGGGAACTAAACCAGACCTGGATCATCTGGC 1859
                                                                                  

consensus_8293#1      ------------------------------------------------------------
consensus_8293#2      ------------------------------------------------------------
consensus_8293#0      TCGAGCAGGGGCGGAGCTAGTATATATTAGGGGGGTGCCCAGAAACCTGGTCAAGAAAAT 1919
                                                                                  

consensus_8293#1      ------------------------------------------------------------
consensus_8293#2      ------------------------------------------------------------
consensus_8293#0      TTTTTAGCTATACCTCATCTATTTTCATCATGTATGTACCCTCTAAATACAAACTTAGGC 1979
                                                                                  

consensus_8293#1      --------------------------------------------------------
consensus_8293#2      --------------------------------------------------------
consensus_8293#0      ATCCGCATCAGCTTAAACTTGATCTAAAGTAGAGTAAATTAAACAAGTGACACCAC 2035
                                                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)