These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8304#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1567 fasta sequence [AGACGAGAAGGCAAAACATTTAGAGGCCATTGAAGAAGTTGAGCAAGCAAAGAAATCATTCACCCGGGAGGCCTACTCTAGGAACAAGGCAGAAATGGTAGCGAGCATGATCTCCCTCGATAAGGCAAAAGTTGTTGATGCTATCTTGTCAACAAGCAAAAATTGCAGGCGATACAAAAAACATGAGATCGAGCTCGCCACTGATAATTTCTCTGAAGCAAGGAAGATTGGTGAGGGAGGTTATGGGAATGTGTATAGGTGCACCCTTGATCATACTGAAGTTGCTGTCAAGGTCATTCAGCAAGATTCCATCGACAAGACCGATGAGTTCCTGAGGGAGGTTGACATTCTCAGCCAGCTTCAGCATCCCAACCTGGTTTTGTTGCTTGGCTTCTGCCCTGAAATTGGCTGTCTTGTATACGAATACTTGCAGAATGGAAGTCTAGAAGATCAACTTCTTAACAACAAAGGGCGCCAGCCGCTGCATTGGTTCCTAAGGTTCCAAATCATCTTTGATGTGTCATGCGGGCTTGCATTCTTGCATGGAAGGAAACCGGAACCTATAGTCCACCGTGACCTCAAACCCGCAAACATCTTACTGAACAAGAATTATGTGGGTAAAATTGGCGATGCCGGTTTCGCGAAGCTCATATCGGATCTTGTGCCTGACTGGC-AAACGGAGTACAAAGAGACCATCATCGCCGGCACGCTGTACTATATGGATCCTGAGTACCAGCAAACCGGGACGGTTCGTCCGAAATCGGACCTTTTCGGCCTTGGGAGTTATCATTCTTCAGATGCTAACCGGCAAACGCCCCAATGGGCTCATTGTCAGCGTAGAAAACGCCATCAGAAACGGGATGCTTGCTGATATCCTTGACAAGTCTCAGACTGATTGGCCACTTGTTGAGGCAGAAATGTTGGCAAAGCTTGGCTTGAGATGCACTGCCCTAAAATGCAGAGAGAGACCTGGCCTTGAGTCAGAGGTTCTCCCCAAGCTCCAGGAAATTCTGCATAGGATTACTTCCACTGTTAACTTAAGAAGTCCAAAGTTAAATGTGCCAAGCCACTTCATCTGCCCTATAATGCAGGAGGTAATGAATGATCCTTATGTTGCTGCTGATGGGCACACGTATGAGCAACAAGCAATCAAAGCTTGGCTCAAGAAACACAAAGTATCCCCGGTCACACGGCGAATTCTACCAAATTTGTCCGTAATCCCAAACCATTCGTTGCGAGCTGCGATACAGCAGTGGAAGTCACAATCTGCTCATGCAAAGTCATAAAATGGGCGTGGGAGGTTGNTTCGATATGATTTAACTTTTTTTTGNTCTTTTGAGTTCTTTACCCCGGAGNTTTGNTTCGATATGATTTAACTTTTTTTGGTCTTTGGAGNTCTTTATCCTGTAAATTAGAGTGCA-GTTAGGATCTTAGGGAGG-AGGGCTGTTGCCGGTAAATAAAGGTGTTAACCGTGCAAACTATTTAGTACCGAAATTGAAAAAATTGCAGATATGATTTGTTCTTATAATATGAGTAACATGTTTCTCTTTCAGTTTCTGTGTTGTCT] [+] EMBL CA766449 [AGACGAGAAGGCAAAACATTTAGAGGCCATTGAAGAAGTTGAGCAAGCAAAGAAATCATTCACCCGGGAGGCCTACTCTAGGAACAAGGCAGAAATGGTAGCGAGCATGATCTCCCTCGATAAGGCAAAAGTTGTTGATGCTATCTTGTCAACAAGCAAAAATTGCAGGCGATACAAAAAACATGAGATCGAGCTCGCCACTGATAATTTCTCTGAAGCAAGGAAGATTGGTGAGGGAGGTTATGGGAATGTGTATAGGTGCACCCTTGATCATACTGAAGTTGCTGTCAAGGTCATTCAGCAAGATTCCATCGACAAGACCGATGAGTTCCTGAGGGAGGTTGACATTCTCAGCCAGCTTCAGCATCCCAACCTGGTTTTGTTGCTTGGCTTCTGCCCTGAAATTGGCTGTCTTGTATACGAATACTTGCAGAATGGAAGTCTAGAAGATCAACTTCTTAACAACAAAGGGCGCCAGCCGCTGCATTGGTTCCTAAGGTTCCAAATCATCTTTGATGTGTCATGCGGGCTTGCATTCTTGCATGGAAGGAAACCGGAACCTATAGTCCACCGTGACCTCAAACCCGCAAACATCTTACTGAACAAGAATTATGTGGGTAAAATTGGCGATGCCGGNTTCGCGAAGCTCATATCGGATCTTGNGCCTGACTGGCAAAACGGAGTACAAAGAGACCATTATCGNCGGCACGCTGTACTATATGGATCCTGAGTACCAGC AACCGGGACGGNTCGTCCGAAATCGGACCT ] [+] EMBL C73105 [ ATGTGTCATGCGGGCTTGCATTCTTGCATGGAAGGAAACCGGAACCTATAGTCCACCGTGACCTCAAACCCGCAAACATCTTACTGAACAAGAATTATGTGGGTAAAATTGGCGATGCCGGTTTCGCGAA NTCATATCGGATCTTGTGCCTGACTGGC AAACGGAGTACAAAGAGACCATCATCGCCGGCACGCTGTACTATATGGATCCTGAGTACCAGCAAACCGGGACGGTTCGTCCGAAATCGGACCTTTTCGGCCTTGGGAGTTATCATTCTTCAGAT ] [+] EMBL CB096600 [ ATTGGCGATGCCGGTTTCGCGAAGCTCATATCGGATCTTGTGCCTGACTGGC AAACGGAGTACAAAGAGACCATCATCGCCGGCACGCTGTACTATATGGATCCTGAGTACCAGCAAACCGGGACGGTTCGTCCGAAATCGGACCTTTTCGGCC TGGGAGTTATCATTCTTCAGATGCTAACCGGCAAACGCCCCAATGGGCTCATTGTCAGCGTAGAAAACGCCATCAGAAACGGGATGCTTGCTGATATCCTTGACAAGTCTCAGACTGATTGGCCACTTGTTGAGGCAGAAATGTTGGCAAAGCTTGGCTTGAGATGCACTGCCCTAAAATGCAGAGAGAGACCTGGCCTTGAGTCAGAGGTTCTCCCCAAGCTCCAGGAAATTCTGCATAGGATTACTTCCACTGTTAACTTAAGAAGTCCAAAGTTAAATGTGCCAAGCCACTTCATCTGCCCTATAATGCAGGAGGTAATGAATGATCCTTATGTTGCTGCTGATGGGCACACGTATGAGCAACAAGCAATCAAAGCTTGGCTCAAGAAACACAAAGTATCCCCGGTCACACGGCGAATTCTACCAAATTTGTCCGTAATCCCAAACCATTCGTTGCGAGCTGCGATACAGCAGTGGAAGTCACAATCTGCTCATGCAAAGTCATAAAATGGGCGTGGGAGGTTGNTTCGATATGATTTAACTTTTTTTTGNTCTTTTGAGTTCTTTACCCCGGAGNTTTGNTTCGATATGATTTAACTTTTTTTGGTCTTTGGAGNTCTTTATCCTGNAAATTANAGNGCAGGTTAGGATCTTAAGGAGGNANGGC ] [-] EMBL CB647037 [ GGCCTGAAGTCAGAGGTTCTCCCCAAGCTCCAGGAAATTCTGCATAGGATTACTTCCACTGTTAACTTAAGAAGTCCAAAGTTAAATGTGCCAAGCCACTTCATCTGCCCTATAATGCAGGAGGTAATGAATGATCCTTATGTGGCTGCTGATGGGCACACGTATGAGCAACAAGCAATCAAAGCTTGGCTCAAGAAACACAAAGTATCCCCGGTCACACGGCGAATTCTACCAAATTTGTCCGTAATCCCAAACCATTCGTTGCGAGCTGCGATACAGCAGTGGAAGTCACAATCTGCTCATGCAAAGTCATAAAATGGGCGT GGAGTTTGTTTCGATATGATTTAAC TTTTTTGTTC TTTGAGTTCTTTA TCCGGAG TTTGTTTCGATATGATTTAAC TTTTTTGTTCTTT GAGTTCTTTATCCTGTAAATTAGAGTGCA GTTAGGATCTTAGGGAGG AGGGCTGTTGCCGGTAAATAAAGGTGTTAACCGTGCAAACTATTTAGTACCGAAATTGAAAAAATTGCAGATATGATTTGTTCTTATAATATGAGTAACATGTTTCTCTTTCAGTTTCTGTGTTGTCT] [+] EMBL AU075377 [ GTAAATTNGAGTGCA GTTAGGATCTTAGGGAGG AGGGCTGTTGCCGGTAAATAAAGGTGTTANCCGTGCAAACTATTTAGTNCCGAAATTGAAAAAATTGCAGATATGATTTGTTCTTATAATATGAGTAACATGTTTCTCTTTCAGTTTCTGTGTTGTC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||