These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8354#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1660 fasta sequence [AGACGACTTGGCCACATCGTTCACACACTTCACTCACACGAGAGAGAGAGAGAGAGAGAGAGAGAAAGCTCAGAGCTGCTTCCTCCCAAAAGCTTCTT-CC-AACA-ACAAT-GGCGT-CGTTCTCTCCT-CCT-CCCCGCTAAACCGCCGCC-GGCGTCCCGACCCGACGTGCTTGTTGCCTGCATCTGC-GACAAGGCGAGAAGAGAACGGGGGCC-CAAGCCCAC-GCCTCGCCGAATCGCGTC-GGTGCTTTGGATCGTGGCCATGGACATGGAGA-CGGAGAAGCAGCAGCAGCAGACGAGGTGCCCGCCTTGGCTCCAGGCGGCCATTGC-AGACATCGAGCAGCGGGTGCGGGCGCTGGCGGTGAGCGTGCCGGAGGACGCGGCGGCGACGGCGACGGACCACTCCTTCGCCGAGCGCGCCGAGAACTACTACCACAAGCGGCCGCAGCTGCTGGCGCTGCTCACCGACCTCCACCACCGCTACCTCTACCTCGCCGACCGCTACTCCCAGTCTCTCCTCGCCGCCAACAAGCCCTTCCACGCTGCCGCCGCCTCCTCCGACTGCGGCTCCTCCGACGTCGACGACCGCTCCTCCGACACCGGTAGCTCCCTCTCCTTCCAGCCTCCACCCACCACCAGCAGCAGTGTTCGTGATGCCGTTGACGCTGAGCTGGTGGTGGCGGAGCTGGTGGCCGCTTGGATTGATCGGGAGATTCTCGCCGACGAGGCGGAGCGGCGGAAGGCGGAGTCGGCGAGGAAGATCGAGCTGCAGGGGAGCCTCGTGGAGGTGCTGGAGTCGGAGAGGCTGGTGCTGCTCGGCGAGAACGCGCGGGTCGGGTTCCGCGCGTCGGCGGCCGAGGAGGAGGCGGCGGCCGCGGCGGCCGAGCTGGGTTACATGCGGCGGCGCGCGGCGGAGATGGCGCGGCTGGTGGTGAAGCTCCGGGAGGACCACCGGGTGTGCATGCTGGGTCGCAAGATCGAGGCGCTGCAGTCGCAGGTGTACGGGCTGGAGCTGCGGAACCGGGAGTGCTACGAGGCCATGGCGGCGTGGGAGGCGGAGAGGAAGGTGGGCCTCGCCGAGATCGAGCGGCTGCGCGCGGACAACAAGCGGCTGGCCGCGGAGGCCGCCATGGCCGCCGCGGCGAGGCGGAAGCGGAAGGGCGGGAACGGAAGCGGGTGGCTGTGGTGGGCGCGGGTGCGGATGGCGGCGGAGTGGACGCCGTGCGCGCCGGCGGTGAGGAAGGTCGGTGAGCGGATCAAGCACGGCGGCGGCCGGAAGGACGTCAAGTACAACGCCGGCGGCTGCTTCTGCCTCTAGTTTGGATTTTGGCGGGATGGTTTCTTTTTGGGTGGGTCAATGTTCATTTTACCCCTTGGATTGTGATGATATTGCGTGCAAGTATCAAGGAGGGGAGTAGTAATAGTAATCAGGTTATGGGATTATGCAGAGTGAGAGAGAGAGAGAGAGAGAGAGAGAAATTAATTAGCGAGAGGTTAATTAGCTTGTAAAATGGATCAGTTGCATGTTGGTGGTAAAACTAGTGTACTGAGACTCAAGTATATAATATTATGACATGTTCAAAAAAAAAAAAAAAAAAAAAAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAGAAA] [+] EMBL AK101157 [AGACGACTTGGCCACATCGTTCACACACTTCACTCACAC GAGAGAGAGAGAGAGAGAGACAAAGCTCAGAGCTGCTTCCTCCCAAAAGCTTCTT CC AACA ACAAT GGCGT CGTTCTCTCCT CCT CCCCGCTAAACCGCCGCC GGCGTCCCGACCCGACGTGCTTGTTGACTGCATCTGC GACAAGGCGAGAAGAGAACGGGGGCC CAAGCCCAC GCCTCGCCGAATCGCGTC GGTGCTTTGGATCGTGGCCATGGACATGGAGA CGGAGAAGCAGCAGCAGCAGACGAGGTGCCCGCCTTGGCTCCAGGCGGCCATTGC AGACATCGAGCAGCGGGTACGGGCGCTGGCGGTGAGCGTGCCGGAGGACGCGGCGGCGACGGCGACGGACCACTCCTTCGCCGAGCGCGCTGAGAACTACTACCACAAGCGGCCGCAGCTGCTGGCGCTGCTCACCGACCTCCACCACCGCTACCTCTACCTCGCCGACCGCTACTCCCAGTCTCTCCTCGCCGCCAACAAGCCCTTCCACGCTGCCGCCGCCTCCTCCGACTGCGGCTCCTCCGACGTCGACGACCGCTCCTCCGACACCGGTAGCTCCCTCTCCTTCCAGCCTCCACCCACCACCAGCAGCAGTGTTCGTGATGCCGTTGACGCTGAGCTGGTGGTGGCGGAGCTGGTGGCCGCTTGGATTGATCGGGAGATTCTCGCCGACGAGGCGGAGCGGCGGAAGGCGGAGTCGGCGAGGAAGATCGAGCTGCAGGGGAGCCTCGTGGAGGTGCTGGAGTCGGAGAGGCTGGTGCTGCTCGGCGAGAACGCGCGGGTCGGGTTCCGCGCGTCGGCGGCCGAGGAGGAGGCGGCGGCCGCGGCGGCCGAGCTGGGTTACATGCGGCGGCGCGCGGCGGAGATGGCGCGGCTGGTGGTGAAGCTCCGGGAGGACCACCGGGTGTGCATGCTGGGTCGCAAGATCGAGGCGCTGCAGTCGCAGGTGTACGGGCTGGAGCTGCGGAACCGGGAGTGCTACGAGGCCATGGCGGCGTGGGAGGCGGAGAGGAAGGTGGGCCTCGCCGAGATCGAGCGGCTGCGCGCGGACAACAAGCGGCTGGCCGCGGAGGCCGCCATGGCCGCCGCGGCGAGGCGGAAGCGGAAGGGCGGGAACGGAAGCGGGTGGCTGTGGTGGGCGCGGGTGCGGATGGCGGCGGAGTGGACGCCGTGCGCGCCGGCGGTGAGGAAGGTCGGTGAGCGGATCAAGCACGGCGGCGGCCGGAAGGACGTCAAGTACAACGCCGGCGGCTGCTTCTGCCTCTAGTTTGGATTTTGGCGGGATGGTTTCTTTTTGGGTGGGTCAATGTTCATTTTACCCCTTGGATTGTGATGATATTGCGTGCAAGTATCAAGGAGGGGAGTAGTAATAGTAATCAGGTTATGGGATTATGCAGAGTGAGAGAGAGAGAGAGAGAGAGAGAGAAATTAATTAGCGAGAGGTTAATTAGCTTGTAAAATGGATCAGTTGCATGTTGGTGGTAAAACTAGTGTACTGAGACTCAAGTATATAATATTAT ] [+] EMBL BI799140 [ CACTTCACTCACACGAGAGAGAGAGAGAGAGAGAGAGAGAAAGCTCAGAGCTGCTTCCTCCCAAAAGCTTCTTGCCAAACAGACAATGGGCGTGCGTTCTCTCCTGCCTGCCCCGCTAAACCGCCGCCAGGCGTCCCGACCCGACGTGCTTGTTGCCTGCATCTGC GACAAGGCGAGAAGAGAACGGGGGCC CAAGCCCACAGCCTCGCCGAATCGCGTCAGGTGCTTTGGATCGTGGCCATGGACATGGAGA CGGAGAAGCAGCA CAGCAGACGAGGTGCCCGCCTTGGCTCCA GCGGCCATTCCAAGACATCGAGCAGCGGGT CGGGC CT GCGGTGAGCGTGCCGGA GACGCGGCGGCGACGGCGACGGACCACTCCTTC CCGAGCGCGCCGAGAACTACTACCAC ] [+] EMBL BI799925 [ ACTTCACTCACACGAGAGAGAGAGAGAGAGAGAGAGAGAAAGCTCAGAGCTGCTTCCTCCCAAAAGCTTCTT CC AACA ACAAT GGCGT CGTTCTCTCCT CCT CCCCGCTAAACCGCCGCC GGCGTCCCGACCCGACGTGCTTGTTGCCTGCATCTGCAGACAAGGCGAGAAGAGAACGGGGGCCACAAGCCCAC GCCTCGCCGAATCGCGTC GGTGCTTTGGATCGTGGCCATGGACATGGAGA CGGAGAAGCAGCAGCAGCAGACGAGGTGCCCGCCTTGGCTCCAGGCGGCCATTGC AGACATCGAGCAGCGGGTGCGGGCGCTGGCGGTGAGCGTGCCGGAGGACGCGGCGGCGACGGCGACGGACCACTCCTTCGCCGAGCGCGCCGAGAACTACT ] [+] EMBL BI799568 [ ACTTCACTCACACGAGAGAGAGAGAGAGAGAGAGAGAGAAAGCTCAGAGCTGCTTCCTCCCAAAAGCTTCTT CC AACA AC AT GGCGT CGTTCTCTCCT CCT CCCCGCTAAACCGCCGCC GGCGTCCCGACCCGACGTGCTTGTTGCCTGCATCTGC GACAAGGCGAGAAGAGAACGGGGGCC CAAGCCCAC GCCTCGCCGAATCGCGTC GGTGCTTTGGATCGTGGCCATGGACATGGAGACCGGAGAAGCAGCAGCAGCAGACGAGGTGCCCGCCTTGGCTCCAGGCGGCC TTGC AGACATCGAGCAGCGGGTGCGGGCGCTGGCGGTGAGCGTGCCGGAGGACGCGGCGGCGACGGCGACGGACCACTCCTTCGCCGAGCGCGCCGAGAACTACT ] [+] EMBL CF314774 [ TCAGGTTATGGGATTATGCAGAGTGAGAGAGAGAGAGATAGAGAGAGAGAAATTAATTAGCGAGAGGTTAATTAACTTGTAAAATGGATCAGTTGCATGTTGGTGGTAAAACTAGTGTACTGAGACTCAAGTATATAATATTATGACATGTTCAAAAAAAAAAAAAAAAAAAAAAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAGAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||