These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8378#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2614 fasta sequence [ACAACACACACCATGCATCTCAAACAAATTTCTATGGTCCATCCGGACATCTCATTTGTCTCCATGGGGCTGGGCAAGACACTCTTGGTCGTCTTTAGCTTGCTACATGCCTTAGTGTTAGCAACATCAGTAGGTGTTGAGCATGCAACAGATGATGTATCCACCTACATCATACATGTTGCACATGTGCATGCGACACCTCCAACTCATGCCTCGCAATGCATGGACCAGCACGCCATTGCACACTACACCTCCTTTCTCCAAGGGATCCTCCCTTCTCACTTAAGCGAGCCAACACCACGCCTTGTCTATGCATACTCCCACGCGGCCACAGGCTTTGCCGCGAAGCTAGCGAAGCACCAGGCTACACACATCGTGCACCATCCCAGCATCCTT-GCCATCTTCCCCGACAAGCGCAATGAGTTGCAGACCACTCTGTCTCCCTCCTTCCTCGGCCTCTCACCGTCCAACGGCCTCGTGCAGGCATCGAACGATGGTGGCACTGGTGCAGTGATCGCAGTGGTAGACACTGGTGTTTATCCTAAGAACCGTAGGTCCTTTACCGTTGACCCATCACTGCCTCCGCCGCCGAGCACCTTCCGTGGCCACTGCATCTCAACCCCTTCCTTCAACGCGACTGCCTACTGCAACAACAAGCTCGTCGGTGCAAAGTATTTCTGTAGAGGGTACGAGGCTGCATTAGGCCACCCCATCGATGAGACGCAAGAGTCAAAGTCACCACTTGACACCGAAGGCCATGGCACGCACACCGCTTCTACTGCCGCAGGATCTGCGGTCCCTGGCGCCAACCTATTTGGCTATGCCAATGGCACCGCCCAAGGCATGGCTGTGCGTGCGCATATTGCCATCTACAAGGTGTGCTGGGCAAAAGGATGTTATGATTCTGACATCCTCGCGGGCATGGATGAGGCGATTGCAGATAGAGTAAATGTCATATCTCTTTCCCTGGGTGGTCGGAGTGAACAACTCTACAATGAACCCACGTCCGTTGGTGCATTCAATGCCATCCGCAGAGGCATATTTGTCTCTGCTGCCGCCGGGAACGACGGCCCTGACATGTCTACTGCTAATAACCTTGCACCATGGATGGTCACGGTTGGTGCGTCAAGCATAAACCGTCGGTTCCCAGCAAACATTATCCTCGGAAATGGCGAAACTTATGTCGGCACCTCCCTCTACTCAGGTCGGAACATAGCTGCTTCTTTGATACCACTAGTATACAGTGGTGATGCTGGCTCTAGATTGTGTGAACCTGGGAAGCTCTCTCGCAACATAGTCATTGGCAAGATAGTTCTTTGCGAGATCGGCTATGCCCCCGCACAAGAAGCTGCTGTCCAACAAGCCGGTGGTGTTGGTGCCATCGTTCCAAGTAGAAATGTCTATGGTCAGTTCTTCCTGAGTTCACCCGACTTGATCCCGGCATCAACAGTGACTTTCGCTGACGCCAATGCAATCTATTCGTACACGCAATCGGCGGCGAACCCGGTTGCAAGAATTGAATTTCGCGGCACCATGATCAGCCAATCACCATATGCTCCGAGGGTCGCGGCCTTCTCGAGCCGTGGACCTAACCGCTTTG-TGGCTGAGATACTCAAGCCGGACATAATCGCCCCTGGCGTCGACATCCTCGCCGCATGGACAGGAGAAAACTCGCCAAGCTCCCTCAGCATCGACACGAGGCGTGTCGAGTTCAACATCATCTCTGGCACGTCCATGGCGTGCCCTCACGTGAGCGGCATCGCTGCTATGCTCAAGGTGGCACGACCAGACTGGAGCCCTACGGCGATCAAATCGGCCATGATGACCACGGCTTATGAGGTGGAC-AACGGCGGCAACGCCATCATGTCGTCAGTG-AATGGGCGGGCGGCTGGG-CCATTTGAGCTCGGTTCTGGTCACGTTGACCCC--AACAACGCTCTCGACCCTGGCCTTGTGTACAACGCCACCACCGACGACTACATCGCCTTCCTCTGCGGCCTTGGCTACACACCAAACCAGATAGCGATTTTCACAAGGGACAGCACGACGACCTACTGCTCACGTCGGCCGCCCATCGGGGACCTGAACTACCCGGCATTCTCCATGGTGTTTGCGAGGTCCGGTGGTCAGGTAACGCAACGCCGCACCGTGACCAACGTCGGGGCGAACACCAACGCCGTGTACGACGTGACCATCACCGCGCCGCCTGGCACTAGGCTCACGGTGGCACCAATGAGGCTCACGTTCAACGCGCAGCGCAAGACGCTTGACTATGCGATCACCTTGTCGGCAGGGTCAAGCAACTCGCCATACAACGCGTGGGGAGATATCGTCTGGAGCGATGGCCAGCACATGGTGAGGAGCCCCGTCGTGGCCACCTGGAAATAAATCACCACTTGTGACATTGTATCGTACGTTTATAGTAATTGAAGGCCATCATCTCAGATGGTGCCATGATGTAAACGTAACATACGTAGTACTGTATGGATGAACCCGGGAAAAACGCGTTGTCATCGTTGTTCCTGCTACCGCTAGCACTTGCTGCTTGGCTGCTACTGTATAATCAGCACGTATGCATTAATAAATAAATCTGAAGTAAATTGTCCTCAAAAAAAAA] [+] EMBL AK070669 [ACAACACACACCATGCATCTCAAACAAATTTCTATGGTCCATCCGGACATCTCATTTGTCTCCATGGGGCTGGGCAAGACACTCTTGGTCGTCTTTAGCTTGCTACATGCCTTAGTGTTAGCAACATCAGTAGGTGTTGAGCATGCAACAGATGATGTATCCACCTACATCATACATGTTGCACATGTGCATGCGACACCTCCAACTCATGCCTCGCAATGCATGGACCAGCACGCCATTGCACACTACACCTCCTTTCTCCAAGGGATCCTCCCTTCTCACTTAAGCGAGCCAACACCACGCCTTGTCTATGCATACTCCCACGCGGCCACAGGCTTTGCCGCGAAGCTAGCGAAGCACCAGGCTACACACATCGTGCACCATCCCAGCATCCTT GCCATCTTCCCCGACAAGCGCAATGAGTTGCAGACCACTCTGTCTCCCTCCTTCCTCGGCCTCTCACCGTCCAACGGCCTCGTGCAGGCATCGAACGATGGTGGCACTGGTGCAGTGATCGCAGTGGTAGACACTGGTGTTTATCCTAAGAACCGTAGGTCCTTTACCGTTGACCCATCACTGCCTCCGCCGCCGAGCACCTTCCGTGGCCACTGCATCTCAACCCCTTCCTTCAACGCGACTGCCTACTGCAACAACAAGCTCGTCGGTGCAAAGTATTTCTGTAGAGGGTACGAGGCTGCATTAGGCCACCCCATCGATGAGACGCAAGAGTCAAAGTCACCACTTGACACCGAAGGCCATGGCACGCACACCGCTTCTACTGCCGCAGGATCTGCGGTCCCTGGCGCCAACCTATTTGGCTATGCCAATGGCACCGCCCAAGGCATGGCTGTGCGTGCGCATATTGCCATCTACAAGGTGTGCTGGGCAAAAGGATGTTATGATTCTGACATCCTCGCGGGCATGGATGAGGCGATTGCAGATAGAGTAAATGTCATATCTCTTTCCCTGGGTGGTCGGAGTGAACAACTCTACAATGAACCCACGTCCGTTGGTGCATTCAATGCCATCCGCAGAGGCATATTTGTCTCTGCTGCCGCCGGGAACGACGGCCCTGACATGTCTACTGCTAATAACCTTGCACCATGGATGGTCACGGTTGGTGCGTCAAGCATAAACCGTCGGTTCCCAGCAAACATTATCCTCGGAAATGGCGAAACTTATGTCGGCACCTCCCTCTACTCAGGTCGGAACATAGCTGCTTCTTTGATACCACTAGTATACAGTGGTGATGCTGGCTCTAGATTGTGTGAACCTGGGAAGCTCTCTCGCAACATAGTCATTGGCAAGATAGTTCTTTGCGAGATCGGCTATGCCCCCGCACAAGAAGCTGCTGTCCAACAAGCCGGTGGTGTTGGTGCCATCGTTCCAAGTAGAAATGTCTATGGTCAGTTCTTCCTGAGTTCACCCGACTTGATCCCGGCATCAACAGTGACTTTCGCTGACGCCAATGCAATCTATTCGTACACGCAATCGGCGGCGAACCCGGTTGCAAGAATTGAATTTCGCGGCACCATGATCAGCCAATCACCATATGCTCCGAGGGTCGCGGCCTTCTCGAGCCGTGGACCTAACCGCTTTG TGGCTGAGATACTCAAGCCGGACATAATCGCCCCTGGCGTCGACATCCTCGCCGCATGGACAGGAGAAAACTCGCCAAGCTCCCTCAGCATCGACACGAGGCGTGTCGAGTTCAACATCATCTCTGGCACGTCCATGGCGTGCCCTCACGTGAGCGGCATCGCTGCTATGCTCAAGGTGGCACGACCAGACTGGAGCCCTACGGCGATCAAATCGGCCATGATGACCACGGCTTATGAGGTGGAC AACGGCGGCAACGCCATCATGTCGTCAGTG AATGGGCGGGCGGCTGGG CCATTTGAGCTCGGTTCTGGTCACGTTGACCCC AACAACGCTCTCGACCCTGGCCTTGTGTACAACGCCACCACCGACGACTACATCGCCTTCCTCTGCGGCCTTGGCTACACACCAAACCAGATAGCGATTTTCACAAGGGACAGCACGACGACCTACTGCTCACGTCGGCCGCCCATCGGGGACCTGAACTACCCGGCATTCTCCATGGTGTTTGCGAGGTCCGGTGGTCAGGTAACGCAACGCCGCACCGTGACCAACGTCGGGGCGAACACCAACGCCGTGTACGACGTGACCATCACCGCGCCGCCTGGCACTAGGCTCACGGTGGCACCAATGAGGCTCACGTTCAACGCGCAGCGCAAGACGCTTGACTATGCGATCACCTTGTCGGCAGGGTCAAGCAACTCGCCATACAACGCGTGGGGAGATATCGTCTGGAGCGATGGCCAGCACATGGTGAGGAGCCCCGTCGTGGCCACCTGGAAATAAATCACCACTTGTGACATTGTATCGTACGTTTATAGTAATTGAAGGCCATCATCTCAGATGGTGCCATGATGTAAACGTAACATACGTAGTACTGTATGGATGAACCCGGGAAAAACGCGTTGTCATCGTTGTTCCTGCTACCGCTAGCACTTGCTGCTTGGCTGCTACTGTATAATCAGCACGTATGCATTAATAAATAAATCTGAAGTAAATTGTCCTC ] [+] EMBL C73126 [ TGCATCTCAAACAAATTTCTATGGTCCATCCGGACATCTCATTTGTCTCCATGGGGCTGGGCAAGACACTCTTGGTCGTCTTTAGCTTGCTACATGCCTTAGTGTTAGCAACATCAGTAGGTGTTGAGCATGCAACAGATGATGTATCCACCTACATCATACATGTTGCACATGTGCATGCGACACCTCCAACTCATGCCTCGCAATGCATGGACCAGCACGCCATTGCACACTACACCTCCTTTCTCCAAGGGATCCTCCCTTCTCACTTAAGCGAGCCAACACCACGCCTTGTCTATGCATACTCCCACGCGGCCACAGGCTTTGCCGCG AGTAAGCG AG ACCAGGCTACACACATCG GCACCATCCCAG ATCCTTGGCAATCTTTCCCGACAAGCGCAATGAnn ] [+] EMBL C73050 [ AGTATACAGTGGTGATGCTGGCTCTAGATTGTGTGAACCTGGGAAGCTCTCTCGCAACATAGTCATTGGCAAGATAGTTCTTTGCGAGATCGGCTATGCCCCCGCACAAGAAGCTGCTGTCCAACAAGCCGGTGGTGTTGGTGCCATCGTTCCAAGTAGAAATGTCTATGGTCAGTTCTTCCTGAGTTCACCCGACTTGATCCCGGCATCAACAGTGACTTTCGCTGACGCCAATGCAATCTATTCGTACACGCAATCGGCGGCGAA CCGGTTGCAAGAATTGAATTTCGCGGCACCATGATCAGCCAATCACCATATGCTCCGAGGGTCGCGGCCTTCTCGAGCCGTGGACCTAACCGCTTTGTTGGCTGAGATACTCAAGCCGGACATAATCGCCCTGGGGGTCGAAATCCTCGCCGANTGGGAANGGGGAAACTCGCNAA ] [+] EMBL AU075395 [ ATGAGTTGGACAAACGGCGGCAACGCAATCATGTCGTCAGTGAAATGGGCGGGCGGNTGGGCCCATTTGAGCTCGGTTCTGGTCACGTTGACCCCCAAACAACGCTCTCGACCNTGGCCTTGTGTACAACGCCACCACCGACGACTACATCGCCTTCCTCTGCGGCCTTGGCTACACACCAAACCAGATAGCGATTTTCACAAGGGACAGCACGACGACCTACTGCTCACGTCGGCCGCCCATCGGGGACCTGAACTACCCGGCATTCTCCATGGTGTTTGCGAGGTCCGGTGGTCAGGTAACGCAACGCCGCACCGTGACCAACGTCGGGGCGAACACCAACGCCGTGTACGACGTGACCATCACCGCGCCGCCTGGCACTAGGCTCACGGTGGCACCAATGAGGCTCACGTTCAACGCGCAGCGCAAGACGCTTGACTATGCGATCACCTTGTCGGCAGGGTCAAGCAACTCGCCATACAACGCGTGGGGAGATATCGTCTGGAGCGATGGCCAGCACATGGTGAGGAGCCCCGTCGTGGCCACCTGGAAATAAATCACCACTTGTGACATTGTATCGTACGTTTATAGTAATTGAAGGCCATCATCTCAGATGGTGCCATGATGTAAACGTAACATACGTAGTACTGTATGGATGAACCCGGGAAAAACGCGTTGTCATCGTTGTTCCTGCTAaaaaa ] [+] EMBL AU085918 [ CGGTGGTCAGGTAACGCAACGCCGCACCGTGACCAACGTCGGGGCGAACACCAACGCCGTGTACGACGTGACCATCACCGCGCCGCCTGGCACTAGGCTCACGGTGGCACCAATGAGGCTCACGTTCAACGCGCAGCGCAAGACGCTTGACTATGCGATCACCTTGTCGGCAGGGTCAAGCTACTCGCCATACAACGCGTGGGGAGATATCGTCTGGAGCGATGGCCAGCACATGGTGAGGAGCCCCGTCGTGGCCACCTGGAAATAAATCACCACTTGTGACATTGTATCGTACGTTTATAGTAATTGAAGGCCATCATCTCAGATGGTGCCATGATGTAAACGTAACATACGTAGTACTGTATGGATGAACCCGGGAAAAACGCGTTGTCATCGTTGTTCCTGCTACCGCTAGCACTTGCTGCTTGGCTGCTACTGTATAATCAGCACGTATGCATTAATAAATAAATCTGAAGTAAATTGTCCTCAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||