cluster # 8388

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Oryza sativa
cluster # 8388 cluster # 8388 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8388#0 length = 1894 sequences # 5
consensusID : consensus_8388#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1894
fasta sequence
                              [ACCATCCGTCTTATTTAAAAAATATTAAAAAAATTAGTCATACATAAAGTACTATTTATATTTTATCATCTAATAACAACAAAAATACTAATCATAAACTTTTTTCAAATAAGACGAACGGTGAAACGTTAAACATGAATAAAGCTAAAACAGTACTTATTTTAGAACGGAGGGATCAGTACTCTGCGTGAGTGCTCGTGGCGTGCTGGTTGGAAACGACCATTGACTGATTACGTGCTACACGTGGCAGACAGACATGTGGGCCCTCCCCACTCCCTTCCATGCTTCAGCTTCACACGATCGATCGATCGATGGAGATGCGGCGATAGTTGCGCTCCTCCTCATTCACAGTCCACACTGCCATCAGCCATGGGGGGCAGCCACCACCTCTTCCGCTTCCTCGCCGCCGACGACCACCCTTTCTTCCCCACCTTCCCAACCTCCTCCTCCTCCTTCCTCCTCGACGACACCCACCCATTTTTCTTCCCTCCCTCCTCCTCATGCCCACTCGGTTTCACCTCTCCTCCTTCATCGTCTTGCCCACTCGGCTTCACCTCCTCCTACGACCTCGACGCCGCCTTCCACCACCATCTCGACCTCGACCTCGACCTTGACCTCTTCCTCCCAACCCCGACCCCACCTGTAACCACCTCCTGCCCCGCCCTCCGCGATCCCTTCCTTCTCCACCACTCCCTCGCCCACCGCGTCTCCGCGCTTGAGCTCGCCGCCCCACGCAGCAAGTACACCTACGAGGCCGAATCCGCCGGCAGGAAGATCAAGTGGACCACCCACGACAAGCCCGACGGCGACCGGACCTTCAAGTGGGAGGCCCAGATCGACACCCCCAACGACGATGGCTTCGACCGCAAGTGGAAGTGGGAGTCCAAGGCCTCCGCCGCCGGCACCACCAAGCTCAAGTGGGCCAAGGAGGTCAAGGGCAAGGGCTTCCTCCACCCATGGTCGCACGCCTACTCCGTCGAGGAGGTCTTCGGGGACGACGACCACCACCACAAGGCAGACAAGACAGCAGAAAACAAGGTCAAGCAGCACAACAAGGATACTTCTGCCAAGGAGGAGAAGAAGAAGACGAACAAGTCTAATGTTCAGATCGTTGAGATCGACGACAACACTGCCGGATGCGTCGCCATCAACAAGGCGTTTGCAAGCAGCTACGCCAAGGGCAAGAGAAAGCAGCTGTCCCCGCAGGATGCTGCATTGTTGATCCAGATGAACTACCGGGCTCACCTAGCCCACCGCTCGCAAGTGCTGCGCTGCCTCCGTCATCTGGCGGTGGCCAAGGCCAAGCTCAAGGACATTAGGTCCTTGTTCTACAACATCTCTTACCGCCGCCGCATTTCGCATGACTCTGAAGAGCGTCAGAGGTTTGCCGACAAAATCATTGCCCTGCTCGCCACTGTTGATGCCCTTGAGGGACCAGACTATATGGTTCGCAATGCAAAGAGGTCTATGCTGGAGGAGCTGGAGGGGATGCTAGAGATCGTAGGTCCTCAGTCACTAGGGAAGCCAAGGACTCTGAGCCGCAGAAAGTTTGAGAACCATATCTAATGATATGAGGACTGGTGTCAAGGGCAAGTGAAAGGCACCATCGGTTCTATTTCGTAGTGCGGCGTATGAAGATGCTTGATGGGGGACCTACCTTTCTGAATGTGTTTACGGTTTAGACAGAATGTTGTGTCTGTAACTCTAGTTGTATGATCTATCTTCTGCTTGAACTAGTACTTATGTGTTGCTAGACTAGTTAGAGCTTCTTTATAACCTCTTGTTGTTTGAGGAAGCTTCTTGTAGAAACTGTTTCATAATTTGTCATGAAATGATGTGCGGCATGTGCC-CCCTAATAAATAAGACCATTACCATATGGTATGCATATTGGCAT]

[-] EMBL AK120505             [ACCATCCGTCTTATTTAAAAAATATTAAAAAAATTAGTCATACATAAAGTACTATTTATATTTTATCATCTAATAACAACAAAAATACTAATCATAAACTTTTTTCAAATAAGACGAACGGTGAAACGTTAAACATGAATAAAGCTAAAACAGTACTTATTTTAGAACGGAGGGATCAGTACTCTGCGTGAGTGCTCGTGGCGTGCTGGTTGGAAACGACCATTGACTGATTACGTGCTACACGTGGCAGACAGACATGTGGGCCCTCCCCACTCCCTTCCATGCTTCAGCTTCACACGATCGATCGATCGATGGAGATGCGGCGATAGTTGCGCTCCTCCTCATTCACAGTCCACACTGCCATCAGCCATGGGGGGCAGCCACCACCTCTTCCGCTTCCTCGCCGCCGACGACCACCCTTTCTTCCCCACCTTCCCAACCTCCTCCTCCTCCTTCCTCCTCGACGACACCCACCCATTTTTCTTCCCTCCCTCCTCCTCATGCCCACTCGGTTTCACCTCTCCTCCTTCATCGTCTTGCCCACTCGGCTTCACCTCCTCCTACGACCTCGACGCCGCCTTCCACCACCATCTCGACCTCGACCTCGACCTTGACCTCTTCCTCCCAACCCCGACCCCACCTGTAACCACCTCCTGCCCCGCCCTCCGCGATCCCTTCCTTCTCCACCACTCCCTCGCCCACCGCGTCTCCGCGCTTGAGCTCGCCGCCCCACGCAGCAAGTACACCTACGAGGCCGAATCCGCCGGCAGGAAGATCAAGTGGACCACCCACGACAAGCCCGACGGCGACCGGACCTTCAAGTGGGAGGCCCAGATCGACACCCCCAACGACGATGGCTTCGACCGCAAGTGGAAGTGGGAGTCCAAGGCCTCCGCCGCCGGCACCACCAAGCTCAAGTGGGCCAAGGAGGTCAAGGGCAAGGGCTTCCTCCACCCATGGTCGCACGCCTACTCCGTCGAGGAGGTCTTCGGGGACGACGACCACCACCACAAGGCAGACAAGACAGCAGAAAACAAGGTCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AK102953             [                                                                                                                                                                                                                                                                                                                                         TTGCGCTCCTCCTCATTCACAGTCCACACTGCCATCAGCCATGGGGGGCAGCCACCACCTCTTCCGCTTCCTCGCCGCCGACGACCACCCTTTCTTCCCCACCTTCCCAACCTCCTCCTCCTCCTTCCTCCTCGACGACACCCACCCATTTTTCTTCCCTCCCTCCTCCTCATGCCCACTCGGTTTCACCTCTCCTCCTTCATCGTCTTGCCCACTCGGCTTCACCTCCTCCTACGACCTCGACGCCGCCTTCCACCACCATCTCGACCTCGACCTCGACCTTGACCTCTTCCTCCCAACCCCGACCCCACCTGTAACCACCTCCTGCCCCGCCCTCCGCGATCCCTTCCTTCTCCACCACTCCCTCGCCCACCGCGTCTCCGCGCTTGAGCTCGCCGCCCCACGCAGCAAGTACACCTACGAGGCCGAATCCGCCGGCAGGAAGATCAAGTGGACCACCCACGACAAGCCCGACGGCGACCGGACCTTCAAGTGGGAGGCCCAGATCGACACCCCCAACGACGATGGCTTCGACCGCAAGTGGAAGTGGGAGTCCAAGGCCTCCGCCGCCGGCACCACCAAGCTCAAGTGGGCCAAGGAGGTCAAGGGCAAGGGCTTCCTCCACCCATGGTCGCACGCCTACTCCGTCGAGGAGGTCTTCGGGGACGACGACCACCACCACAAGGCAGACAAGACAGCAGAAAACAAGGTCAAGCAGCACAACAAGGATACTTCTGCCAAGGAGGAGAAGAAGAAGACGAACAAGTCTAATGTTCAGATCGTTGAGATCGACGACAACACTGCCGGATGCGTCGCCATCAACAAGGCGTTTGCAAGCAGCTACGCCAAGGGCAAGAGAAAGCAGCTGTCCCCGCAGGATGCTGCATTGTTGATCCAGATGAACTACCGGGCTCACCTAGCCCACCGCTCGCAAGTGCTGCGCTGCCTCCGTCATCTGGCGGTGGCCAAGGCCAAGCTCAAGGACATTAGGTCCTTGTTCTACAACATCTCTTACCGCCGCCGCATTTCGCATGACTCTGAAGAGCGTCAGAGGTTTGCCGACAAAATCATTGCCCTGCTCGCCACTGTTGATGCCCTTGAGGGACCAGACTATATGGTTCGCAATGCAAAGAGGTCTATGCTGGAGGAGCTGGAGGGGATGCTAGAGATCGTAGGTCCTCAGTCACTAGGGAAGCCAAGGACTCTGAGCCGCAGAAAGTTTGAGAACCATATCTAATGATATGAGGACTGGTGTCAAGGGCAAGTGAAAGGCACCATCGGTTCTATTTCGTAGTGCGGCGTATGAAGATGCTTGATGGGGGACCTACCTTTCTGAATGTGTTTACGGTTTAGACAGAATGTTGTGTCTGTAACTCTAGTTGTATGATCTATCTTCTGCTTGAACTAGTACTTATGTGTTGCTAGACTAGTTAGAGCTTCTTTATAACCTCTTGTTGTTTGAGGAAGCTTCTTGTAGAAACTGTTTCATAATTTGTCATGAAATGATGTGCGGCATGTGCC CCCTAATAAATAAGACCATTACCAT                   ]
[+] EMBL CB653015             [                                                                                                                                                                                                                                                                                                                                                                 CACACTGCCATCAGCCATGGGGGGCAGCCACCACCTCTTCCGCTTCCTCGCCGCCGACGACCACCCTTTCTTCCCCACCTTCCCAACCTCCTCCTCCTCCTTCCTCCTCGACGACACCCACCCATTTTTCTTCCCTCCCTCCTCCTCATGCCCACTCGGTTTCACCTCTCCTCCTTCATCGTCTTGCCCACTCGGCTTCACCTCCTCCTACGACCTCGACGCCGCCTTCCACCACCATCTCGACCTCGACCTCGACCTTGACCTCTTCCTCCCAACCCCGACCCCACCTGTAACCACCTCCTGCCCCGCCCTCCGCGATCCCTTCCTTCTCCACCACTCCCTCGCCCACCGCGTCTCCGCGCTTGAGCTCGCCGCCCCACGCAGCAAGTACACCTACGAGGCCGAATCCGCCGGCAGGAAGATCAAGTGGACCACCCACGACAAGCCCGACGGCGACCGGACCTTCAAGTGGGAGGCCCAGATCGACACCCCCAACGACGATGGCTTCGACCGCAAGTGGAAGTGGGAGTCCAAGGCCTCCGCCGCCGGCACCACCAAGCTCAAGTGGGCCAAGGAGGTCAAGGGCAAGGGCTTCCTCCACCCATGGTCGCACGCCTACTCCGTCGAGGAGGTCTTCGGGGACGACGACCACCACCACAAGGCAGACAAGACAGCAGAGAACAAGGTCAAGCAGCACAACAAGGATACTTCTGCCAAGGAGGAGAAGAAGAAGACGAACAAGTCTAATGTTCAGATCGTTGAGATCGACGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AK063929             [                                                                                                                                                                                                                                                                                                                                                                             AGCCATGGGGGGCAGCCACCACCTCTTCCGCTTCCTCGCCGCCGACGACCACCCTTTCTTCCCCACCTTCCCAACCTCCTCCTCCTCCTTCCTCCTCGACGACACCCACCCATTTTTCTTCCCTCCCTCCTCCTCATGCCCACTCGGTTTCACCTCTCCTCCTTCATCGTCTTGCCCACTCGGCTTCACCTCCTCCTACGACCTCGACGCCGCCTTCCACCACCATCTCGACCTCGACCTCGACCTTGACCTCTTCCTCCCAACCCCGACCCCACCTGTAACCACCTCCTGCCCCGCCCTCCGCGATCCCTTCCTTCTCCACCACTCCCTCGCCCACCGCGTCTCCGCGCTTGAGCTCGCCGCCCCACGCAGCAAGTACACCTACGAGGCCGAATCCGCCGGCAGGAAGATCAAGTGGACCACCCACGACAAGCCCGACGGCGACCGGACCTTCAAGTGGGAGGCCCAGATCGACACCCCCAACGACGATGGCTTCGACCGCAAGTGGAAGTGGGAGTCCAAGGCCTCCGCCGCCGGCACCACCAAGCTCAAGTGGGCCAAGGAGGTCAAGGGCAAGGGCTTCCTCCACCCATGGTCGCACGCCTACTCCGTCGAGGAGGTCTTCGGGGACGACGACCACCACCACAAGGCAGACAAGACAGCAGAAAACAAGGTCAAGCAGCACAACAAGGATACTTCTGCCAAGGAGGAGAAGAAGAAGACGAACAAGTCTAATGTTCAGATCGTTGAGATCGACGACAACACTGCCGGATGCGTCGCCATCAACAAGGCGTTTGCAAGCAGCTACGCCAAGGGCAAGAGAAAGCAGCTGTCCCCGCAGGATGCTGCATTGTTGATCCAGATGAACTACCGGGCTCACCTAGCCCACCGCTCGCAAGTGCTGCGCTGCCTCCGTCATCTGGCGGTGGCCAAGGCCAAGCTCAAGGACATTAGGTCCTTGTTCTACAACATCTCTTACCGCCGCCGCATTTCGCATGACTCTGAAGAGCGTCAGAGGTTTGCCGACAAAATCATTGCCCTGCTCGCCACTGTTGATGCCCTTGAGGGACCAGACTATATGGTTCGCAATGCAAAGAGGTCTATGCTGGAGGAGCTGGAGGGGATGCTAGAGATCGTAGGTCCTCAGTCACTAGGGAAGCCAAGGACTCTGAGCCGCAGAAAGTTTGAGAACCATATCTAATGATATGAGGACTGGTGTCAAGGGCAAGTGAAAGGCACCATCGGTTCTATTTCGTAGTGCGGCGTATGAAGATGCTTGATGGGGGACCTACCTTTCTGAATGTGTTTACGGTTTAGACAGAATGTTGTGTCTGTAACTCTAGTTGTATGATCTATCTTCTGCTTGAACTAGTACTTATGTGTTGCTAGACTAGTTAGAGCTTCTTTATAACCTCTTGTTGTTTGAGGAAGCTTCTTGTAGAAACTGTTTCATAATTTGTCATGAAATGATGTGCGGCATGTGCC CCCTAATAAATAAGACCATTACCATATGGTATGCATATTGGCAT]
[-] EMBL CB653016             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AAGCAGCTACGCCAAGGGCAAGAGAAAGCAGCTGTCCCCGCAGGATGCTGCATTGTTGATCCAGATGAATTACCGGGCTCACCTAGCCCACCGCTCGCAAGTGGTGCGCTGCCTCCGTCATCTGGCGGTGGCCAAGGCCAAGCTCAAGGACATTAGGTCCTTGTTCTACAACATCTCTTACCGCCGCCGCATTTCGCATGACTGTGAAGAGCGTCAGAGGTTTGCCGACAAAATCATTGCCCTGTTCGCCACTGTTGATGCCCTTGAGGGACCAGACTATATGGTTGGCAATGCAAAGAGGTTTATGCTGGAGGAGCTGGAGGGGATGTTAGAGATCGTAGGTCCTCAGTCACTAGGGAAGCCAAGGACTATGAGCCGCAGAAAGTTTGAGAACCATATGTAATGATATGAGGTCTGGTGTCAAGGGCAAGTGAAAGGCACCATCGGTTGTATTTCGTAGTGCGGCGTATGAAGATGCTTGATGGGGGACCTACCTTTATGAATGTGTTTACGGTTTAGACAGAATGTTGTGTCTGTAACTCTAGTTGTATGATGTATGTTCTGCTTGAAATAGTACTTATGTGTTGCTAGAGTAGTTAGAGCTTCTTTATAACCTCTTGTTGTTGGAGGAAGCTTCTTGTAGAAACTGTTTCATAATTTGTCATGAAATGATGTGCGGCATGTGCCGGCCTAATAAATAAGACCATTGCCATATGGTATGCAaaaaaggga]




>consensus_8388#0
ACCATCCGTCTTATTTAAAAAATATTAAAAAAATTAGTCATACATAAAGTACTATTTATA
TTTTATCATCTAATAACAACAAAAATACTAATCATAAACTTTTTTCAAATAAGACGAACG
GTGAAACGTTAAACATGAATAAAGCTAAAACAGTACTTATTTTAGAACGGAGGGATCAGT
ACTCTGCGTGAGTGCTCGTGGCGTGCTGGTTGGAAACGACCATTGACTGATTACGTGCTA
CACGTGGCAGACAGACATGTGGGCCCTCCCCACTCCCTTCCATGCTTCAGCTTCACACGA
TCGATCGATCGATGGAGATGCGGCGATAGTTGCGCTCCTCCTCATTCACAGTCCACACTG
CCATCAGCCATGGGGGGCAGCCACCACCTCTTCCGCTTCCTCGCCGCCGACGACCACCCT
TTCTTCCCCACCTTCCCAACCTCCTCCTCCTCCTTCCTCCTCGACGACACCCACCCATTT
TTCTTCCCTCCCTCCTCCTCATGCCCACTCGGTTTCACCTCTCCTCCTTCATCGTCTTGC
CCACTCGGCTTCACCTCCTCCTACGACCTCGACGCCGCCTTCCACCACCATCTCGACCTC
GACCTCGACCTTGACCTCTTCCTCCCAACCCCGACCCCACCTGTAACCACCTCCTGCCCC
GCCCTCCGCGATCCCTTCCTTCTCCACCACTCCCTCGCCCACCGCGTCTCCGCGCTTGAG
CTCGCCGCCCCACGCAGCAAGTACACCTACGAGGCCGAATCCGCCGGCAGGAAGATCAAG
TGGACCACCCACGACAAGCCCGACGGCGACCGGACCTTCAAGTGGGAGGCCCAGATCGAC
ACCCCCAACGACGATGGCTTCGACCGCAAGTGGAAGTGGGAGTCCAAGGCCTCCGCCGCC
GGCACCACCAAGCTCAAGTGGGCCAAGGAGGTCAAGGGCAAGGGCTTCCTCCACCCATGG
TCGCACGCCTACTCCGTCGAGGAGGTCTTCGGGGACGACGACCACCACCACAAGGCAGAC
AAGACAGCAGAAAACAAGGTCAAGCAGCACAACAAGGATACTTCTGCCAAGGAGGAGAAG
AAGAAGACGAACAAGTCTAATGTTCAGATCGTTGAGATCGACGACAACACTGCCGGATGC
GTCGCCATCAACAAGGCGTTTGCAAGCAGCTACGCCAAGGGCAAGAGAAAGCAGCTGTCC
CCGCAGGATGCTGCATTGTTGATCCAGATGAACTACCGGGCTCACCTAGCCCACCGCTCG
CAAGTGCTGCGCTGCCTCCGTCATCTGGCGGTGGCCAAGGCCAAGCTCAAGGACATTAGG
TCCTTGTTCTACAACATCTCTTACCGCCGCCGCATTTCGCATGACTCTGAAGAGCGTCAG
AGGTTTGCCGACAAAATCATTGCCCTGCTCGCCACTGTTGATGCCCTTGAGGGACCAGAC
TATATGGTTCGCAATGCAAAGAGGTCTATGCTGGAGGAGCTGGAGGGGATGCTAGAGATC
GTAGGTCCTCAGTCACTAGGGAAGCCAAGGACTCTGAGCCGCAGAAAGTTTGAGAACCAT
ATCTAATGATATGAGGACTGGTGTCAAGGGCAAGTGAAAGGCACCATCGGTTCTATTTCG
TAGTGCGGCGTATGAAGATGCTTGATGGGGGACCTACCTTTCTGAATGTGTTTACGGTTT
AGACAGAATGTTGTGTCTGTAACTCTAGTTGTATGATCTATCTTCTGCTTGAACTAGTAC
TTATGTGTTGCTAGACTAGTTAGAGCTTCTTTATAACCTCTTGTTGTTTGAGGAAGCTTC
TTGTAGAAACTGTTTCATAATTTGTCATGAAATGATGTGCGGCATGTGCCCCCTAATAAA
TAAGACCATTACCATATGGTATGCATATTGGCAT
clustalw multiple alignements is not computed in this case