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Oryza sativa
cluster # 8402 cluster # 8402       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8402#0 length = 2263 sequences # 2  
consensus_8402#1 length = 1594 sequences # 3  

consensusID : consensus_8402#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2263
fasta sequence
                              [TTTCCTCGACACTCTGCACTCCAGGCTTCAATTACCCCCTCTCTTCTCCAACCTCAATCTCTCTTAGCCAAACTACTCTCCATCAATTCGGCGCGGCTAGTGCGAGCTATATTCTCTACTCATATTTGCTTCCATCATCTATCAATCCCTACCATCGCCCTCTTTCTGTTTTGATCATATCAAACTTGGTTCTCACTTTGCCATCACCATTTCCATAGGGAGTTGAATTCAGGCCCCTGGCTTAGAAGTAGTAGTATTTGAGGAATTGGTGGCATGTAGATTTAAGCTCAACTGAAGTTGTCGCTGTGGACATCTCCTCATCATCTTTGGTGTGGATATGGCCCGAGTGATTACAGTTCTTAATCCTGAAAAATTGCTCAATTGGTTTTCCCCACTGATGCTGATGACCTTGTTGCAAATCGCTCAATTAGTTTTATTCCCAACTGATGCTGACGTTGTTGCAGACCATGCGAGAGTGATCAGAAGGGGTGGCTACAATGGAATGAGACGATGACCACGAAGACGAAGCCAGGGATGGCGGAGCGGTTACTGCTCCCATTGAGCATGGTACTGGTCCAGCTATTCACCATAGGTGCCCTCCTCCTCGCGAAGCTATCATTCAATAGTGGGATGGCACCTTTCGTCCTCCTCGCATACCGCAACCTCATTGGCACCGTCACCATGTTACCCTTCGCCTTCTGGTTCGAGAGGCAAATGATGAAAAAGGTTAACTACAAGGTACTGGGCTGGATATTTTTCAACGCTTTGTTCGGAATTGTTTTGGCTATGGGGCTACACTACTACGGCCTACGCGCTACCAATGCTGGATACACCGTCAATTTCCTAAATTTGGTCCCCGTCGTTACCTTCATCATTGCAGCGATCTTCCGATTGGAGAAGCTGAAGCTGAAGACGCGGTCTGGCATGATAAAGGTGATTGGCACGGTGATCTGTGTTGTGGGCACCATGGTGGTGAGCCTGTACAGGGGCAAGCTGCTGCATTTGTGGCCTACCCACCTGCTGAAGCCGGCGCAGCTGCGGGCGATCGGCGGCAGCGACGACTCCACCTTCCCTACCCACCACAACATGCTCATCGGGACGCTCTTCCTTTGCGGCAGTTGCCTCAGCTACGCCTTCTGGTTCATCGTTCAGGCCAAAGTGAACAAGGAGTTCCCATCTAAGTACTTCTCGACGATGCTCGCATGCTTGATGGGGACAATCCAGGCGGTGGTGATCGGGATCGCCGTCGACCGGGACCGGTCGGCATGGGCACTCCACTGGGATCTGCAGCTGATCACCATCATCTATTCGGGGGTTTTCAACACGGCTGCCACCTTCTGCTTGATCACGTGGGCGGTGTCACGGCGAGGGCCAACCTACCCCTCCATGTTCAACTCGCTTGCGCTGATCATCACCGTCGTCCTTGACTCGATGCTGCTTGGAAGCGACATCTCTGTCGGGAGCTTGCTAGGGGCATTTATGATAATCATTGGCCTCTATTCCTTCCTCTGGGGAAAAGGGAAGGAGATAAAAGAGCAGCAGCAGCAAGTTCCCACGAATACAGAGGCAGATCAGAGCAAAATCACTTATCCTAAAAGTAATGGTGAGGTGC-GAATTATGTTGGATACA-TAGACAATGTAGATTGTAGAGATCGCTAGATATAACAAAGGATTGTATTTGGATTACTATAGACTAGAATTAAGTCGCTTGTTTATTGATGAGGTATATGTTGATTCTTCTATCGTCAATAGAGAAAGATAGGAAGGTGAGTGTAGTTTAGCCATTTCTCTTTGCATACATGGAAGGTAAGTACTATATATGGCGAAATAGGAAGCGTTATCACCTCCCGGATGAGGCCACACGTACATTTATATTAATATGACGTGAAAACAGCCTTTCACCGTGGCAGTACATAGATCAATCCATTGTATACCGGTATAGATCACATAAAATGATAACCAACTCCTCTATCCTCTACTTTTCTGTTACAAAGAGATAAACCCTGACATATATATCTAACAAGTATGCCAAGATGGTGGTATGAAAATGGGAGATGGAATTTTTGTTAATTTGAAAGAAAAATGTACTACATCTCTTGCGATCTACATTCACTACTAGAAAAATGATTTTTCCAGGCGGCCCAAAACCATTTTCGCAGGCGGGGAGGAGGACCGCNGCTAACACGTCAACTGTGAAAAAAGACCATTTTCGCAACTGGGCCCGTGGCCTGCCTGCAAAAATCATCTTAGAAAAATAATAAAAA]

[+] EMBL AK069283             [TTTCCTCGACACTCTGCACTCCAGGCTTCAATTACCCCCTCTCTTCTCCAACCTCAATCTCTCTTAGCCAAACTACTCTCCATCAATTCGGCGCGGCTAGTGCGAGCTATATTCTCTACTCATATTTGCTTCCATCATCTATCAATCCCTACCATCGCCCTCTTTCTGTTTTGATCATATCAAACTTGGTTCTCACTTTGCCATCACCATTTCCATAGGGAGTTGAATTCAGGCCCCTGGCTTAGAAGTAGTAGTATTTGAGGAATTGGTGGCATGTAGATTTAAGCTCAACTGAAGTTGTCGCTGTGGACATCTCCTCATCATCTTTGGTGTGGATATGGCCCGAGTGATTACAGTTCTTAATCCTGAAAAATTGCTCAATTGGTTTTCCCCACTGATGCTGATGACCTTGTTGCAAATCGCTCAATTAGTTTTATTCCCAACTGATGCTGACGTTGTTGCAGACCATGCGAGAGTGATCAGAAGGGGTGGCTACAATGGAATGAGACGATGACCACGAAGACGAAGCCAGGGATGGCGGAGCGGTTACTGCTCCCATTGAGCATGGTACTGGTCCAGCTATTCACCATAGGTGCCCTCCTCCTCGCGAAGCTATCATTCAATAGTGGGATGGCACCTTTCGTCCTCCTCGCATACCGCAACCTCATTGGCACCGTCACCATGTTACCCTTCGCCTTCTGGTTCGAGAGGCAAATGATGAAAAAGGTTAACTACAAGGTACTGGGCTGGATATTTTTCAACGCTTTGTTCGGAATTGTTTTGGCTATGGGGCTACACTACTACGGCCTACGCGCTACCAATGCTGGATACACCGTCAATTTCCTAAATTTGGTCCCCGTCGTTACCTTCATCATTGCAGCGATCTTCCGATTGGAGAAGCTGAAGCTGAAGACGCGGTCTGGCATGATAAAGGTGATTGGCACGGTGATCTGTGTTGTGGGCACCATGGTGGTGAGCCTGTACAGGGGCAAGCTGCTGCATTTGTGGCCTACCCACCTGCTGAAGCCGGCGCAGCTGCGGGCGATCGGCGGCAGCGACGACTCCACCTTCCCTACCCACCACAACATGCTCATCGGGACGCTCTTCCTTTGCGGCAGTTGCCTCAGCTACGCCTTCTGGTTCATCGTTCAGGCCAAAGTGAACAAGGAGTTCCCATCTAAGTACTTCTCGACGATGCTCGCATGCTTGATGGGGACAATCCAGGCGGTGGTGATCGGGATCGCCGTCGACCGGGACCGGTCGGCATGGGCACTCCACTGGGATCTGCAGCTGATCACCATCATCTATTCGGGGGTTTTCAACACGGCTGCCACCTTCTGCTTGATCACGTGGGCGGTGTCACGGCGAGGGCCAACCTACCCCTCCATGTTCAACTCGCTTGCGCTGATCATCACCGTCGTCCTTGACTCGATGCTGCTTGGAAGCGACATCTCTGTCGGGAGCTTGCTAGGGGCATTTATGATAATCATTGGCCTCTATTCCTTCCTCTGGGGAAAAGGGAAGGAGATAAAAGAGCAGCAGCAGCAAGTTCCCACGAATACAGAGGCAGATCAGAGCAAAATCACTTATCCTAAAAGTAATGGTGAGGTGC GAATTATGTTGGATACA TAGACAATGTAGATTGTAGAGATCGCTAGATATAACAAAGGATTGTATTTGGATTACTATAGACTAGAATTAAGTCGCTTGTTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU093965             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               anTGGTGAGGTGCGGAATTATGTTGGATCCATTAGNCAATGTAGATTGTAGAGANCGCTAGATNTACCAAAGGATTGTATTTGGATTACTATAGACTAGAATTAAGTCGCTTGTTTATTGATGAGGTATATGTTGATTCTTCTATCGTCAATAGAGAAAGATAGGAAGGTGAGTGTAGTTTAGCCATTTCTCTTTGCATACATGGAAGGTAAGTACTATATATGGCGAAATAGGAAGCGTTATCACCTCCCGGATGAGGCCACACGTACATTTATATTAATATGACGTGAAAACAGCCTTTCACCGTGGCAGTACATAGATCAATCCATTGTATACCGGTATAGATCACATAAAATGATAACCAACTCCTCTATCCTCTACTTTTCTGTTACAAAGAGATAAACCCTGACATATATATCTAACAAGTATGCCAAGATGGTGGTATGAAAATGGGAGATGGAATTTTTGTTAATTTGAAAGAAAAATGTACTACATCTCTTGCGATCTACATTCACTACTAGAAAAATGATTTTTCCAGGCGGCCCAAAACCATTTTCGCAGGCGGGGAGGAGGACCGCNGCTAACACGTCAACTGTGAAAAAAGACCATTTTCGCAACTGGGCCCGTGGCCTGCCTGCAAAAATCATCTTAGAAAAATAATAAAAA]


>consensus_8402#0 TTTCCTCGACACTCTGCACTCCAGGCTTCAATTACCCCCTCTCTTCTCCAACCTCAATCT CTCTTAGCCAAACTACTCTCCATCAATTCGGCGCGGCTAGTGCGAGCTATATTCTCTACT CATATTTGCTTCCATCATCTATCAATCCCTACCATCGCCCTCTTTCTGTTTTGATCATAT CAAACTTGGTTCTCACTTTGCCATCACCATTTCCATAGGGAGTTGAATTCAGGCCCCTGG CTTAGAAGTAGTAGTATTTGAGGAATTGGTGGCATGTAGATTTAAGCTCAACTGAAGTTG TCGCTGTGGACATCTCCTCATCATCTTTGGTGTGGATATGGCCCGAGTGATTACAGTTCT TAATCCTGAAAAATTGCTCAATTGGTTTTCCCCACTGATGCTGATGACCTTGTTGCAAAT CGCTCAATTAGTTTTATTCCCAACTGATGCTGACGTTGTTGCAGACCATGCGAGAGTGAT CAGAAGGGGTGGCTACAATGGAATGAGACGATGACCACGAAGACGAAGCCAGGGATGGCG GAGCGGTTACTGCTCCCATTGAGCATGGTACTGGTCCAGCTATTCACCATAGGTGCCCTC CTCCTCGCGAAGCTATCATTCAATAGTGGGATGGCACCTTTCGTCCTCCTCGCATACCGC AACCTCATTGGCACCGTCACCATGTTACCCTTCGCCTTCTGGTTCGAGAGGCAAATGATG AAAAAGGTTAACTACAAGGTACTGGGCTGGATATTTTTCAACGCTTTGTTCGGAATTGTT TTGGCTATGGGGCTACACTACTACGGCCTACGCGCTACCAATGCTGGATACACCGTCAAT TTCCTAAATTTGGTCCCCGTCGTTACCTTCATCATTGCAGCGATCTTCCGATTGGAGAAG CTGAAGCTGAAGACGCGGTCTGGCATGATAAAGGTGATTGGCACGGTGATCTGTGTTGTG GGCACCATGGTGGTGAGCCTGTACAGGGGCAAGCTGCTGCATTTGTGGCCTACCCACCTG CTGAAGCCGGCGCAGCTGCGGGCGATCGGCGGCAGCGACGACTCCACCTTCCCTACCCAC CACAACATGCTCATCGGGACGCTCTTCCTTTGCGGCAGTTGCCTCAGCTACGCCTTCTGG TTCATCGTTCAGGCCAAAGTGAACAAGGAGTTCCCATCTAAGTACTTCTCGACGATGCTC GCATGCTTGATGGGGACAATCCAGGCGGTGGTGATCGGGATCGCCGTCGACCGGGACCGG TCGGCATGGGCACTCCACTGGGATCTGCAGCTGATCACCATCATCTATTCGGGGGTTTTC AACACGGCTGCCACCTTCTGCTTGATCACGTGGGCGGTGTCACGGCGAGGGCCAACCTAC CCCTCCATGTTCAACTCGCTTGCGCTGATCATCACCGTCGTCCTTGACTCGATGCTGCTT GGAAGCGACATCTCTGTCGGGAGCTTGCTAGGGGCATTTATGATAATCATTGGCCTCTAT TCCTTCCTCTGGGGAAAAGGGAAGGAGATAAAAGAGCAGCAGCAGCAAGTTCCCACGAAT ACAGAGGCAGATCAGAGCAAAATCACTTATCCTAAAAGTAATGGTGAGGTGCGAATTATG TTGGATACATAGACAATGTAGATTGTAGAGATCGCTAGATATAACAAAGGATTGTATTTG GATTACTATAGACTAGAATTAAGTCGCTTGTTTATTGATGAGGTATATGTTGATTCTTCT ATCGTCAATAGAGAAAGATAGGAAGGTGAGTGTAGTTTAGCCATTTCTCTTTGCATACAT GGAAGGTAAGTACTATATATGGCGAAATAGGAAGCGTTATCACCTCCCGGATGAGGCCAC ACGTACATTTATATTAATATGACGTGAAAACAGCCTTTCACCGTGGCAGTACATAGATCA ATCCATTGTATACCGGTATAGATCACATAAAATGATAACCAACTCCTCTATCCTCTACTT TTCTGTTACAAAGAGATAAACCCTGACATATATATCTAACAAGTATGCCAAGATGGTGGT ATGAAAATGGGAGATGGAATTTTTGTTAATTTGAAAGAAAAATGTACTACATCTCTTGCG ATCTACATTCACTACTAGAAAAATGATTTTTCCAGGCGGCCCAAAACCATTTTCGCAGGC GGGGAGGAGGACCGCNGCTAACACGTCAACTGTGAAAAAAGACCATTTTCGCAACTGGGC CCGTGGCCTGCCTGCAAAAATCATCTTAGAAAAATAATAAAAA



consensusID : consensus_8402#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1594
fasta sequence
                              [TATCTTCTCTCTTGAAAAAGCTCTAAGGGTACCAACATGATGGCAGAGACGATGACCACGAAGACGAAGCCAGGGATGGCGGAGCGGTTACTGCTCCCATTGAGCATGGTACTGGTCCAGCTATTCACCATAGGTGCCCTCCTCCTCGCGAAGCTATCATTCAATAGTGGGATGGCACCTTTCGTCCTCCTCGCATACCGCAACCTCATTGGCACCGTCACCATGTTACCCTTCGCCTTCTGGTTCGAGAGGCAAATGATG-AAAAAGGTTAACTACAAGGTAC-TGGGC-TGGATATTTTTCAACGCTTTGTTCGGAATTGTTTTGGCTATGGGGCTA-CACTACTACGGCCTACGCGCTACCAATGCTGGATACACCGTCAATTTCCTAAATTTGGTCCCCGTCGTTACCTTCATCATTGCAGCGATCTTCCGATTGGAGAAGCTGAAGCTGAAGACGCGGTCTGGCATGATAAAGGTGATTGGCACGGTGATCTGTGTTGTGGGCACCATGGTGGTGAGCCTGTACAGGGGCAAGCTGCTGCATTTGTGGCCTACCCACCTGCTGAAGCCGGCGCAGCTGCGGGCGATCGGCGGCAGCGACGACTCCACCTTCCCTACCCACCACAACATGCTCATCGGGACGCTCTTCCTTTGCGGCAGTTGCCTCAGCTACGCCTTCTGGTTCATCGTTCAGGCCAAAGTGAACAAGGAGTTCCCATCTAAGTACTTCTCGACGATGCTCGCATGCTTGATGGGGACAATCCAGGCGGTGGTGATCGGGATCGCCGTCGACCGGGACCGGTCGGCATGGGCACTCCACTGGGATCTGCAGCTGATCACCATCATCTATTCGGGGGTTTTCAACACGGCTGCCACCTTCTGCTTGATCACGTGGGCGGTGTCACGGCGAGGGCCAACCTACCCCTCCATGTTCAACTCGCTTGCGCTGATCATCACCGTCGTCCTTGACTCGATGCTGCTTGGAAGCGACATCTCTGTCGGGAGGTGAGAATTAATACTGCGACAGCATGTCTGTATATTCAGTCTTAGGGTCGTACTGTCTTATATATGTACGGTATCAAGTCCGGCAAAAGCATGGACTAGCTACCACATGAGAGGCACTATATATACTACTCCATCCGTTTCATATTATAAGACTTTATAACATTGCCCACATTTATATAGATGTTAATGAATCTATACACATATATGTCTAGATTCATTTACATCTATATGAATATGGATAATACTATAGAAAGTCTTATAATATATAACATGCTTTGCTTGCAGCTTGCTAGGGGCATTTATGATAATCATTGGCCTCTATTCCTTCCTCTGGGGAAAAGGGAAGGAGATAAAAGAGCAGCAGCAGCAAGTTCCCACGAATACAGAGGCAGATCAGAGCAAAATCACTTATCCTAAAAGTAATGGTGAGGTGCGAATTATGTTGGATACATAGACAATGTAGATTGTAGAGATCGCTAGATATAACAAAGGATTGTATTTGGATTACTATAGACTAGAATTAAGTCGCTTGTTTATTGATGAGGTATATGTTGATTCTTCTATCGTCAATAGAGAAAGATAGGAAGGTG]

[+] EMBL AK100993             [TATCTTCTCTCTTGAAAAAGCTCTAAGGGTACCAACATGATGGCAGAGACGATGACCACGAAGACGAAGCCAGGGATGGCGGAGCGGTTACTGCTCCCATTGAGCATGGTACTGGTCCAGCTATTCACCATAGGTGCCCTCCTCCTCGCGAAGCTATCATTCAATAGTGGGATGGCACCTTTCGTCCTCCTCGCATACCGCAACCTCATTGGCACCGTCACCATGTTACCCTTCGCCTTCTGGTTCGAGAGGCAAATGATG AAAAAGGTTAACTACAAGGTAC TGGGC TGGATATTTTTCAACGCTTTGTTCGGAATTGTTTTGGCTATGGGGCTA CACTACTACGGCCTACGCGCTACCAATGCTGGATACACCGTCAATTTCCTAAATTTGGTCCCCGTCGTTACCTTCATCATTGCAGCGATCTTCCGATTGGAGAAGCTGAAGCTGAAGACGCGGTCTGGCATGATAAAGGTGATTGGCACGGTGATCTGTGTTGTGGGCACCATGGTGGTGAGCCTGTACAGGGGCAAGCTGCTGCATTTGTGGCCTACCCACCTGCTGAAGCCGGCGCAGCTGCGGGCGATCGGCGGCAGCGACGACTCCACCTTCCCTACCCACCACAACATGCTCATCGGGACGCTCTTCCTTTGCGGCAGTTGCCTCAGCTACGCCTTCTGGTTCATCGTTCAGGCCAAAGTGAACAAGGAGTTCCCATCTAAGTACTTCTCGACGATGCTCGCATGCTTGATGGGGACAATCCAGGCGGTGGTGATCGGGATCGCCGTCGACCGGGACCGGTCGGCATGGGCACTCCACTGGGATCTGCAGCTGATCACCATCATCTATTCGGGGGTTTTCAACACGGCTGCCACCTTCTGCTTGATCACGTGGGCGGTGTCACGGCGAGGGCCAACCTACCCCTCCATGTTCAACTCGCTTGCGCTGATCATCACCGTCGTCCTTGACTCGATGCTGCTTGGAAGCGACATCTCTGTCGGGAGGTGAGAATTAATACTGCGACAGCATGTCTGTATATTCAGTCTTAGGGTCGTACTGTCTTATATATGTACGGTATCAAGTCCGGCAAAAGCATGGACTAGCTACCACATGAGAGGCACTATATATACTACTCCATCCGTTTCATATTATAAGACTTTATAACATTGCCCACATTTATATAGATGTTAATGAATCTATACACATATATGTCTAGATTCATTTACATCTATATGAATATGGATAATACTATAGAAAGTCTTATAATATATAACATGCTTTGCTTGCAGCTTGCTAGGGGCATTTATGATAATCATTGGCCTCTATTCCTTCCTCTGGGGAAAAGGGAAGGAGATAAAAGAGCAGCAGCAGCAAGTTCCCACGAATACAGAGGCAGATCAGAGCAAAATCACTTATCCTAAAAGTAATGGTGAGGTGCGAATTATGTTGGATACATAGACAATGTAGATTGTAGAGATCGCTAGATATAACAAAGGATTGTATTTGGATTACTATAGACTAGAATTAAGTCGCTTGTTTATTGATGAGGTATATGTTGATTCTTCTATCGTCAATAGAGAAAGATAGGAAGGTG]
[+] EMBL C72335               [               AAAAGCTCTAAGGGTACCAACATGATGGCAGANACGATGACCACGAAGACGAAGCCAGGGATGGCGGA CGGTTACTGCTCCCATTGAGCATGGTACTGGTCCAGCTATTCACCATAGGTGCCCTCCTCCTCGCGAA NTATCATTCAATAGTGGGATGGCACCTTTCGTCCTCCTCGCATACCGCAACCTCATTGGCACCGTCACCATGTTANCCTTCGNCTTCTGGTTCGAGANGNAAATGATGAAAAAAGGTTAACTACAAGGTACTTGGGCTTGGATAATTTTCAACGCTTTGTTCGGAATTGTTTTGGCTATGGGGCTANAATTACTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU162176             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCACTGGGATCTGCAGCTGATCACCATCATCTATTCGGGGGTTTTCAACACGGCTGCCACCTTCTGCTTGATCACGTGGGCGGTGTCACGGCGAGGGCCAACCTACCCCTCCATGTTCAACTCGCTTGCGCTGATCATCACCGTCGTCCTTGACTCGATGCTGCTTGGAAGCGACATCTCTGTCGGGAGGTGAGAATTAATACTGCGACA NATGTCTGTATATTCAGTCTTAGGGTCGTACTGTTTTATATATGTACGGTATCAAGTCCGGCAAAAGCATGGACTAGCTACCACATGAGAGGCACTAaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]


>consensus_8402#1 TATCTTCTCTCTTGAAAAAGCTCTAAGGGTACCAACATGATGGCAGAGACGATGACCACG AAGACGAAGCCAGGGATGGCGGAGCGGTTACTGCTCCCATTGAGCATGGTACTGGTCCAG CTATTCACCATAGGTGCCCTCCTCCTCGCGAAGCTATCATTCAATAGTGGGATGGCACCT TTCGTCCTCCTCGCATACCGCAACCTCATTGGCACCGTCACCATGTTACCCTTCGCCTTC TGGTTCGAGAGGCAAATGATGAAAAAGGTTAACTACAAGGTACTGGGCTGGATATTTTTC AACGCTTTGTTCGGAATTGTTTTGGCTATGGGGCTACACTACTACGGCCTACGCGCTACC AATGCTGGATACACCGTCAATTTCCTAAATTTGGTCCCCGTCGTTACCTTCATCATTGCA GCGATCTTCCGATTGGAGAAGCTGAAGCTGAAGACGCGGTCTGGCATGATAAAGGTGATT GGCACGGTGATCTGTGTTGTGGGCACCATGGTGGTGAGCCTGTACAGGGGCAAGCTGCTG CATTTGTGGCCTACCCACCTGCTGAAGCCGGCGCAGCTGCGGGCGATCGGCGGCAGCGAC GACTCCACCTTCCCTACCCACCACAACATGCTCATCGGGACGCTCTTCCTTTGCGGCAGT TGCCTCAGCTACGCCTTCTGGTTCATCGTTCAGGCCAAAGTGAACAAGGAGTTCCCATCT AAGTACTTCTCGACGATGCTCGCATGCTTGATGGGGACAATCCAGGCGGTGGTGATCGGG ATCGCCGTCGACCGGGACCGGTCGGCATGGGCACTCCACTGGGATCTGCAGCTGATCACC ATCATCTATTCGGGGGTTTTCAACACGGCTGCCACCTTCTGCTTGATCACGTGGGCGGTG TCACGGCGAGGGCCAACCTACCCCTCCATGTTCAACTCGCTTGCGCTGATCATCACCGTC GTCCTTGACTCGATGCTGCTTGGAAGCGACATCTCTGTCGGGAGGTGAGAATTAATACTG CGACAGCATGTCTGTATATTCAGTCTTAGGGTCGTACTGTCTTATATATGTACGGTATCA AGTCCGGCAAAAGCATGGACTAGCTACCACATGAGAGGCACTATATATACTACTCCATCC GTTTCATATTATAAGACTTTATAACATTGCCCACATTTATATAGATGTTAATGAATCTAT ACACATATATGTCTAGATTCATTTACATCTATATGAATATGGATAATACTATAGAAAGTC TTATAATATATAACATGCTTTGCTTGCAGCTTGCTAGGGGCATTTATGATAATCATTGGC CTCTATTCCTTCCTCTGGGGAAAAGGGAAGGAGATAAAAGAGCAGCAGCAGCAAGTTCCC ACGAATACAGAGGCAGATCAGAGCAAAATCACTTATCCTAAAAGTAATGGTGAGGTGCGA ATTATGTTGGATACATAGACAATGTAGATTGTAGAGATCGCTAGATATAACAAAGGATTG TATTTGGATTACTATAGACTAGAATTAAGTCGCTTGTTTATTGATGAGGTATATGTTGAT TCTTCTATCGTCAATAGAGAAAGATAGGAAGGTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8402#0      TTTCCTCGACACTCTGCACTCCAGGCTTCAATTACCCCCTCTCTTCTCCAACCTCAATCT 60
consensus_8402#1      ------------------------------------------------------------
                                                                                  

consensus_8402#0      CTCTTAGCCAAACTACTCTCCATCAATTCGGCGCGGCTAGTGCGAGCTATATTCTCTACT 120
consensus_8402#1      ------------------------------------------------------------
                                                                                  

consensus_8402#0      CATATTTGCTTCCATCATCTATCAATCCCTACCATCGCCCTCTTTCTGTTTTGATCATAT 180
consensus_8402#1      ------------------------------------------------------------
                                                                                  

consensus_8402#0      CAAACTTGGTTCTCACTTTGCCATCACCATTTCCATAGGGAGTTGAATTCAGGCCCCTGG 240
consensus_8402#1      ------------------------------------------------------------
                                                                                  

consensus_8402#0      CTTAGAAGTAGTAGTATTTGAGGAATTGGTGGCATGTAGATTTAAGCTCAACTGAAGTTG 300
consensus_8402#1      ------------------------------------------------------------
                                                                                  

consensus_8402#0      TCGCTGTGGACATCTCCTCATCATCTTTGGTGTGGATATGGCCCGAGTGATTACAGTTCT 360
consensus_8402#1      ------------------------------------------------------------
                                                                                  

consensus_8402#0      TAATCCTGAAAAATTGCTCAATTGGTTTTCCCCACTGATGCTGATGACCTTGTTGCAAAT 420
consensus_8402#1      ------------------------------------------------------------
                                                                                  

consensus_8402#0      CGCTCAATTAGTTTTATTCCCAACTGATGCTGACGTTGTTGCAGACCATGCGAGAGTGAT 480
consensus_8402#1      --------------------------------------TATCTTCTCTCTTGAAAAAGCT 22
                                                            *  *    *    ** *  * *

consensus_8402#0      CAGAAGGGGTGGCTACAATGGAATGAGACGATGACCACGAAGACGAAGCCAGGGATGGCG 540
consensus_8402#1      CTAAGGGTACCAACATGATGGCA-GAGACGATGACCACGAAGACGAAGCCAGGGATGGCG 81
                      *  * **       *  **** * ************************************

consensus_8402#0      GAGCGGTTACTGCTCCCATTGAGCATGGTACTGGTCCAGCTATTCACCATAGGTGCCCTC 600
consensus_8402#1      GAGCGGTTACTGCTCCCATTGAGCATGGTACTGGTCCAGCTATTCACCATAGGTGCCCTC 141
                      ************************************************************

consensus_8402#0      CTCCTCGCGAAGCTATCATTCAATAGTGGGATGGCACCTTTCGTCCTCCTCGCATACCGC 660
consensus_8402#1      CTCCTCGCGAAGCTATCATTCAATAGTGGGATGGCACCTTTCGTCCTCCTCGCATACCGC 201
                      ************************************************************

consensus_8402#0      AACCTCATTGGCACCGTCACCATGTTACCCTTCGCCTTCTGGTTCGAGAGGCAAATGATG 720
consensus_8402#1      AACCTCATTGGCACCGTCACCATGTTACCCTTCGCCTTCTGGTTCGAGAGGCAAATGATG 261
                      ************************************************************

consensus_8402#0      AAAAAGGTTAACTACAAGGTACTGGGCTGGATATTTTTCAACGCTTTGTTCGGAATTGTT 780
consensus_8402#1      AAAAAGGTTAACTACAAGGTACTGGGCTGGATATTTTTCAACGCTTTGTTCGGAATTGTT 321
                      ************************************************************

consensus_8402#0      TTGGCTATGGGGCTACACTACTACGGCCTACGCGCTACCAATGCTGGATACACCGTCAAT 840
consensus_8402#1      TTGGCTATGGGGCTACACTACTACGGCCTACGCGCTACCAATGCTGGATACACCGTCAAT 381
                      ************************************************************

consensus_8402#0      TTCCTAAATTTGGTCCCCGTCGTTACCTTCATCATTGCAGCGATCTTCCGATTGGAGAAG 900
consensus_8402#1      TTCCTAAATTTGGTCCCCGTCGTTACCTTCATCATTGCAGCGATCTTCCGATTGGAGAAG 441
                      ************************************************************

consensus_8402#0      CTGAAGCTGAAGACGCGGTCTGGCATGATAAAGGTGATTGGCACGGTGATCTGTGTTGTG 960
consensus_8402#1      CTGAAGCTGAAGACGCGGTCTGGCATGATAAAGGTGATTGGCACGGTGATCTGTGTTGTG 501
                      ************************************************************

consensus_8402#0      GGCACCATGGTGGTGAGCCTGTACAGGGGCAAGCTGCTGCATTTGTGGCCTACCCACCTG 1020
consensus_8402#1      GGCACCATGGTGGTGAGCCTGTACAGGGGCAAGCTGCTGCATTTGTGGCCTACCCACCTG 561
                      ************************************************************

consensus_8402#0      CTGAAGCCGGCGCAGCTGCGGGCGATCGGCGGCAGCGACGACTCCACCTTCCCTACCCAC 1080
consensus_8402#1      CTGAAGCCGGCGCAGCTGCGGGCGATCGGCGGCAGCGACGACTCCACCTTCCCTACCCAC 621
                      ************************************************************

consensus_8402#0      CACAACATGCTCATCGGGACGCTCTTCCTTTGCGGCAGTTGCCTCAGCTACGCCTTCTGG 1140
consensus_8402#1      CACAACATGCTCATCGGGACGCTCTTCCTTTGCGGCAGTTGCCTCAGCTACGCCTTCTGG 681
                      ************************************************************

consensus_8402#0      TTCATCGTTCAGGCCAAAGTGAACAAGGAGTTCCCATCTAAGTACTTCTCGACGATGCTC 1200
consensus_8402#1      TTCATCGTTCAGGCCAAAGTGAACAAGGAGTTCCCATCTAAGTACTTCTCGACGATGCTC 741
                      ************************************************************

consensus_8402#0      GCATGCTTGATGGGGACAATCCAGGCGGTGGTGATCGGGATCGCCGTCGACCGGGACCGG 1260
consensus_8402#1      GCATGCTTGATGGGGACAATCCAGGCGGTGGTGATCGGGATCGCCGTCGACCGGGACCGG 801
                      ************************************************************

consensus_8402#0      TCGGCATGGGCACTCCACTGGGATCTGCAGCTGATCACCATCATCTATTCGGGGGTTTTC 1320
consensus_8402#1      TCGGCATGGGCACTCCACTGGGATCTGCAGCTGATCACCATCATCTATTCGGGGGTTTTC 861
                      ************************************************************

consensus_8402#0      AACACGGCTGCCACCTTCTGCTTGATCACGTGGGCGGTGTCACGGCGAGGGCCAACCTAC 1380
consensus_8402#1      AACACGGCTGCCACCTTCTGCTTGATCACGTGGGCGGTGTCACGGCGAGGGCCAACCTAC 921
                      ************************************************************

consensus_8402#0      CCCTCCATGTTCAACTCGCTTGCGCTGATCATCACCGTCGTCCTTGACTCGATGCTGCTT 1440
consensus_8402#1      CCCTCCATGTTCAACTCGCTTGCGCTGATCATCACCGTCGTCCTTGACTCGATGCTGCTT 981
                      ************************************************************

consensus_8402#0      GGAAGCGACATCTCTGTCGGGAGCT---------TGCTAGGGGCATTTATGATAATCATT 1491
consensus_8402#1      GGAAGCGACATCTCTGTCGGGAGGTGAGAATTAATACTGCGACAGCATGTCTGTATATTC 1041
                      *********************** *         * **  *      * *    **  * 

consensus_8402#0      GGCCTCTATTCCTTCCTCTGGGGAAAAGGGAAGGAGATAAAAGAGCAGCAGCAGCAAGTT 1551
consensus_8402#1      AGTCTTAGGGTCGTACTGTCTTATATATGTACGGTATCA--AGTCCGGCAAAAGCATGGA 1099
                       * **      * * ** *     * * * * **    *  **  * ***  **** *  

consensus_8402#0      CCCACGAATACAGAGGCAGATCAGAGCAAAATCACTTATCCTAAAAGTAATGGTGAGGTG 1611
consensus_8402#1      CTAGCTACCACATGAGAGGCACTATATATACTACTCCATCCGTTTCATATTA-TAAGACT 1158
                      *   * *  ***   *  *  *     * * *     ****      ** *  * **   

consensus_8402#0      CGAATTATGTTGGATACATAGACAATGTAGATTGTAGAGATCGCTAGATATAACAAAGGA 1671
consensus_8402#1      TTA-TAACATTGCCCACATTTATATAGATGTTAATGAATCTATACACATATATGTCTAGA 1217
                        * * *  ***   ****  * *  *  * *  *  *  *    * *****      **

consensus_8402#0      TTGTATTTGGATTACTATAGACTAGAATTAAGTCGCTTGTTTATTGATGAGGTATATGTT 1731
consensus_8402#1      TT-CATTTACATCTATATGAATATGGATAATACTATAGAAAGTCTTATAATATATAACAT 1276
                      **  ****  **   ***  *   * ** *              * ** *  ****   *

consensus_8402#0      GATTCTTCTATCG-TCAATAGAGAAAGATAGGAAGGTGAGTGTAGTTTAGCCATTTCTCT 1790
consensus_8402#1      GCTTTGCTTGCAGCTTGCTAGGGGCATTTATGATAATCATTGGCCTCTATTCCTTCCTCT 1336
                      * **    *   * *   *** *  *  ** **   * * **   * **  * ** ****

consensus_8402#0      TTGCATACATGGAAGGTAAGTACTATATATGGCGAAATAGGAAGCGTTATCACCTCCCGG 1850
consensus_8402#1      GGGGAAA-AGGGAAGGAGA----TAAAAGAGCAGCAGCAGCAAGTTCCCACGAATACAGA 1391
                        * * * * ******  *    ** *   *  * *  ** ***      *   * * * 

consensus_8402#0      ATGAGGCCA---CACGTACATTTATATTAATATGACGTGAAAACAGCCTTTCACCGTGGC 1907
consensus_8402#1      GGCAGATCAGAGCAAAATCACTTATCCTAAAAGTAATGGTGAGGTGCGAATTATGTTGG- 1450
                         **  **   **    ** ****  *** *  *   *  *   **   * *   *** 

consensus_8402#0      AGTACATAGATCAATCCATTGTATACCGGTATAGATCACATAAAATGATAACCAACTCCT 1967
consensus_8402#1      -ATACATAGA------CAATGTAGATTG-TAGAGATCGCTAGATATAACAAAGGATTG-- 1500
                        ********      ** **** *  * ** ***** *   * ** * **   * *   

consensus_8402#0      CTATCCTCTACTTTTCTGTTACAAAGAGATAAACCCTGACATATATATCTAACAAGTATG 2027
consensus_8402#1      ----TATTTGGATTACTATAGACTAGAATTAAGTC---GCTTGTTTATTGATGAGGTATA 1553
                            * *   ** ** *     ***  ***  *    * * * ***  *  * **** 

consensus_8402#0      CCAAGATGGTGGTATGAAAATGGGAGATGGAATTTTTGTTAATTTGAAAGAAAAATGTAC 2087
consensus_8402#1      TGTTGATTCTTCTATCGTCAATAGAGAAAGATAGGAAGGTG------------------- 1594
                          ***  *  ***    *   ****  **      * *                    

consensus_8402#0      TACATCTCTTGCGATCTACATTCACTACTAGAAAAATGATTTTTCCAGGCGGCCCAAAAC 2147
consensus_8402#1      ------------------------------------------------------------
                                                                                  

consensus_8402#0      CATTTTCGCAGGCGGGGAGGAGGACCGCNGCTAACACGTCAACTGTGAAAAAAGACCATT 2207
consensus_8402#1      ------------------------------------------------------------
                                                                                  

consensus_8402#0      TTCGCAACTGGGCCCGTGGCCTGCCTGCAAAAATCATCTTAGAAAAATAATAAAAA 2263
consensus_8402#1      --------------------------------------------------------
                                                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)