These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8476#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2905 fasta sequence [CCGCTCCTCCCATTTCCCCTCTCCCCCAAACTCCTCCTCGTCTCCTCCTCCGCTCCCCCAACCAAATCCCAAATTCCGCACCACCCCGAGCGCGGCGACGGAAGCAGATCGCGGCGATGGAAGCAGATCCGGCCCCATCCTCGACGCCGCCGCCCTCCTCCCCGGCGCCCGCGGCTTCTCCGTCCCGGCATCCTCCAGGTGAGGAAGGAGGAGGGGCTGAGCGCGTGGAGGTGGAGGAGTACGTGGATCCCCCGAGCCCAGATTGCTGCGGCGGAGCCGACCCGGACCATGCGCCGCCGCCGTCGCCGAAAGGTGAGGAGCCGGTGGTGAGCGCTGAGGAGGAGCAGGCGGCGGTTGCAGGAGGTGAAGGGGAGGCTCTTCGCAGCTTCTTGGAGGAATTTGGAGACCAAGGGGATGATTCCCTTGTCCCGTCACCGAAGCTGAAGCAGATAAACACCCCTGACCGCCTCGCTGCTCTTCGTTTTCTTGGGGGAAAGTATAACAGCTTGTTAGAGAGGTACAAGCAGCAGGTGGCTAAGTGTGCCGAGGAGTGTGCGCCGAGGTACGATGGCTTGAAGAAGAAGTACGCAGATGAGTGTGCAGAACGGCGACGATTATACAATGAGCTCATTGAACTGAGGGGTAACATCAGGGTTTTTTGTCGATGCCGCCCTCTAAGCACTGCTGAGATCTCCAATGGGTGTTCATCTATAGTTCAGATCGATCCATCCCATGAGACTGAGCTGCAGTTTGTTCCATCTGATAAAGACAGGAAGGCTTTTAAGTTTGATCATGTTTTTGGACCATCTGACAATCAAGAGACTGTCTTTGCTGAAAGCTTGCCTGTTGTGCGGTCTGTCATGGACGGTTTCAACGTATGCATCTTTGCATATGGACAAACTGGAACTGGGAAAACCTTCACCATGGAAGGGATTCCAGAGGATAGGGGTGTTAACTACAGAGCATTGGAAGAATTATTCAGGTTGTCTGAAGAAAGAAGCTCTTCTGTTGCCTACACATTTGCTGTGAGCATTTTGGAAGTCTATAATGAAAAAATCAGGGATCTTCTAGATGAAAGCTCTGAGCAAACAGGAAGAAAATTGGACATAAAGCAAACTGCTGATGGAACACAAGAGGTGGCTGGTTTGATTGAAGCTCCAATTTATACTATAGATGGTGTTTGGGAGAAACTGAAAGTTGGAGCTAAAAATAGATCGGTTGGAGCAACTAGTGCCAATGAACTAAGCAGCCGCTCTCATAGCTTGGTTAAGGTTACCGTCAGGAGTGAGCATCTGGTGACAGGGCAAAAGTGGAGGAGCCATATCTGGTTGGTCGACCTAGCTGGAAGTGAGCGTGTGAATAAAACAGAAGTAGAAGGGGACAGGCTAAAGGAGTCACAGTTCATAAACAAGTCGCTCTCTGCTTTGGGCGATGTTATTTCTGCCCTTGCCTCAAAAAATGCACACATTCCTTATAGAAATTCCAAGTTGACTCATCTGCTCCAAAGCTCTTTAGGTGGGGATTGCAAGACACTCATGTTCGTGCAGATAAGTCCAAGTTCTGCAGACTCGGGAGAGACTCTCTGCTCACTTAACTTTGCTAGTAGAGTTAGAGCTATAGATCATGGCCCTGCTCGTAAACAAGCAGATCCAGCTGAAACTTTTAAGCTCAAGCAGATGACAGAGAAAATTCGTCATGAGGAGAAGGAAAATGCAAAGTTACTTGAAAGCTTGCAACTGACGCAGCTTAAGTATGCTTCTCGAGAGAATGTCATCAAGACACTTCAAGAGAAGATAAGGGAGGCTGAACAAACGTCCAAAACTTATCAGCAGCGGGTTAGAGAGCTAGAAAATGAATTAGCCAATGAGAAGAAGGCTGCCAGGGATACAGCTAGATCAACAAAGCCACCACTTGCTCCTATGAGGCAGAGACCACCTCTTGGAAGAATTGGCAATCACATTCCACCTAAGGCTCCTCTTAGACTGAGGCTCAGTAAAGCACCCACAATTCAAAATAAAGAGAACATTCCTGTCATGTTGAACAAAGGATCCTCTGGGGCTGATACCAGCAAGGCTGTTGCTGGCAAGGCACGGCGAGTTTCTCTGACTCCTGTGATTCGACACATACCTCTGCAGCCCAAGAGGCGATCCTCACTCGCGGTACTACCAACCCAGAGAGAACAGCTGTCCATATTTCCTGATAAGAGATCAGTGTCCCGTCTGTCCCATATTGACGA-GCCAAGGAGGTCCAATTGCAACCTTTAAATCTAATTCCAGCACCCCCCTTAGCAGGTGCTGCACATAAACAGGTTGATGGCCCCCCAGAAGCACGGCCAATTGAGGAGAATCGAGTTCACCAGTAGCAAGTTCAGAAGCCCTCCAGCGCTGGCCAGGTTCAACTCAAGGAATAACGCCTTGTCACCTCACCAAAAGATGCGGCTAGCATCTGGCTCAGGAAATGCCAGCAAAATATGCTTCAGTGTTCAGAAGAGAGTGATCCTAGGTTCACCTGCTCCAGTGAAAAGCAGTTTGCTCTCTGGTACTGGGGTTTTCAATCCAGCTTTGCGCGAGAAAATGATGGCGGCGAAAATAGGGAATGCGCAGCGCGTGTTCAACACCAACAGGAGGAAGTCTGTCCTTTGAAGTACCTTTTCCAGACCAGAACTGAAGACCAATGTTTGGATGCTCAAACAGTGATGCAGAGTAGGAATGTTGCCGATTACTTTGTTTAACCCGTTGAAAGCCATCCATCTGTACTCGTGGCTTTGTGTTGATAAAAAGTCTGTGATAAGGGTTGTACCCATTCATCAGTTCTTTTTTTAAAATGATTGATGTTAGTGTTCCCTGATATTTTTTTTATTGTATAAATTCGTTACAGTTGCAGTAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK102894 [CCGCTCCTCCCATTTCCCCTCTCCCCCAAACTCCTCCTCGTCTCCTCCTCCGCTCCCCCAACCAAATCCCAAATTCCGCACCACCCCGAGCGCGGCGACGGAAGCAGATCGCGGCGATGGAAGCAGATCCGGCCCCATCCTCGACGCCGCCGCCCTCCTCCCCGGCGCCCGCGGCTTCTCCGTCCCGGCATCCTCCAGGTGAGGAAGGAGGAGGGGCTGAGCGCGTGGAGGTGGAGGAGTACGTGGATCCCCCGAGCCCAGATTGCTGCGGCGGAGCCGACCCGGACCATGCGCCGCCGCCGTCGCCGAAAGGTGAGGAGCCGGTGGTGAGCGCTGAGGAGGAGCAGGCGGCGGTTGCAGGAGGTGAAGGGGAGGCTCTTCGCAGCTTCTTGGAGGAATTTGGAGACCAAGGGGATGATTCCCTTGTCCCGTCACCGAAGCTGAAGCAGATAAACACCCCTGACCGCCTCGCTGCTCTTCGTTTTCTTGGGGGAAAGTATAACAGCTTGTTAGAGAGGTACAAGCAGCAGGTGGCTAAGTGTGCCGAGGAGTGTGCGCCGAGGTACGATGGCTTGAAGAAGAAGTACGCAGATGAGTGTGCAGAACGGCGACGATTATACAATGAGCTCATTGAACTGAGGGGTAACATCAGGGTTTTTTGTCGATGCCGCCCTCTAAGCACTGCTGAGATCTCCAATGGGTGTTCATCTATAGTTCAGATCGATCCATCCCATGAGACTGAGCTGCAGTTTGTTCCATCTGATAAAGACAGGAAGGCTTTTAAGTTTGATCATGTTTTTGGACCATCTGACAATCAAGAGACTGTCTTTGCTGAAAGCTTGCCTGTTGTGCGGTCTGTCATGGACGGTTTCAACGTATGCATCTTTGCATATGGACAAACTGGAACTGGGAAAACCTTCACCATGGAAGGGATTCCAGAGGATAGGGGTGTTAACTACAGAGCATTGGAAGAATTATTCAGGTTGTCTGAAGAAAGAAGCTCTTCTGTTGCCTACACATTTGCTGTGAGCATTTTGGAAGTCTATAATGAAAAAATCAGGGATCTTCTAGATGAAAGCTCTGAGCAAACAGGAAGAAAATTGGACATAAAGCAAACTGCTGATGGAACACAAGAGGTGGCTGGTTTGATTGAAGCTCCAATTTATACTATAGATGGTGTTTGGGAGAAACTGAAAGTTGGAGCTAAAAATAGATCGGTTGGAGCAACTAGTGCCAATGAACTAAGCAGCCGCTCTCATAGCTTGGTTAAGGTTACCGTCAGGAGTGAGCATCTGGTGACAGGGCAAAAGTGGAGGAGCCATATCTGGTTGGTCGACCTAGCTGGAAGTGAGCGTGTGAATAAAACAGAAGTAGAAGGGGACAGGCTAAAGGAGTCACAGTTCATAAACAAGTCGCTCTCTGCTTTGGGCGATGTTATTTCTGCCCTTGCCTCAAAAAATGCACACATTCCTTATAGAAATTCCAAGTTGACTCATCTGCTCCAAAGCTCTTTAGGTGGGGATTGCAAGACACTCATGTTCGTGCAGATAAGTCCAAGTTCTGCAGACTCGGGAGAGACTCTCTGCTCACTTAACTTTGCTAGTAGAGTTAGAGCTATAGATCATGGCCCTGCTCGTAAACAAGCAGATCCAGCTGAAACTTTTAAGCTCAAGCAGATGACAGAGAAAATTCGTCATGAGGAGAAGGAAAATGCAAAGTTACTTGAAAGCTTGCAACTGACGCAGCTTAAGTATGCTTCTCGAGAGAATGTCATCAAGACACTTCAAGAGAAGATAAGGGAGGCTGAACAAACGTCCAAAACTTATCAGCAGCGGGTTAGAGAGCTAGAAAATGAATTAGCCAATGAGAAGAAGGCTGCCAGGGATACAGCTAGATCAACAAAGCCACCACTTGCTCCTATGAGGCAGAGACCACCTCTTGGAAGAATTGGCAATCACATTCCACCTAAGGCTCCTCTTAGACTGAGGCTCAGTAAAGCACCCACAATTCAAAATAAAGAGAACATTCCTGTCATGTTGAACAAAGGATCCTCTGGGGCTGATACCAGCAAGGCTGTTGCTGGCAAGGCACGGCGAGTTTCTCTGACTCCTGTGATTCGACACATACCTCTGCAGCCCAAGAGGCGATCCTCACTCGCGGTACTACCAACCCAGAGAGAACAGCTGTCCATATTTCCTGATAAGAGATCAGTGTCCCGTCTGTCCCATATTCA GATGCCAAGGAGAT CAATTGCAACATTTAATTC AATTCCAGCAACACCATTAGCAGCTGCTGCACATAAACAGGTTGATGGCACCCCAGAAGCACGG CAATTGAGGAGAATCGAGTTCAGCAGTAGCAAGTTCAGAAGCCCTCCAGCGCTGGCCAGGTTCAACTCAAGGAATAACGCCTTGTCACCTCAGCAGAAGCTGCGGCTAGCATCTGGCTCAGGAAATGCCAGCAAAATATGCTTCAGTGTTCAGAAGAGAGTGATCCTAGGTTCACCTGCTCCAGTGAAAAGCAGTCTGCTCTCTGGTACTGGCATCTTCAATCCAGCTCTGCGCGAGAAAATGATGGCGGCGAAAATAGGGAATGCGCAGCGCGTGTTCAACACCAACAGGAGGAAGTCTGTCCTCTGAAGTACCTTTTCCAGACCAGAACTGAAGACCAATGTTTGGATGTTCAAACAGTGATGCAGAGTAGGAATGTTGACGATTACTTTGTTTAACCCGTTGAAAGCCATCCATCTGTACTCGTGGCTTTGTGTTGATAAAATGTCTGTGATAAGGGTTGTACCCATTCATCAGTTCTTTTCTTAAAATGATTGATGTTAGTGTTCCTTGATA TTTTTTTATTGTATAAATTCG ] [-] EMBL CA761422 [ GACGA GCCAAGGAGGTCCAATTGCAACCTTTAAATCTAATTCCAGCACCCCCCTTAGCAGGTGCTGCACATAAACAGGTTGATGGCCCCCCAGAAGCACGGCCAATTGAGGAGAATCGAGTTCACCAGTAGCAAGTTCAGAAGCCCTCCAGCGCTGGCCAGGTTCAACTCAAGGAATAACGCCTTGTCACCTCACCAAAAGATGCGGCTAGCATCTGGCTCAGGAAATGCCAGCAAAATATGCTTCAGTGTTCAGAAGAGAGTGATCCTAGGTTCACCTGCTCCAGTGAAAAGCAGTTTGCTCTCTGGTACTGGGGTTTTCAATCCAGCTTTGCGCGAGAAAATGATGGCGGCGAAAATAGGGAATGCGCAGCGCGTGTTCAACACCAACAGGAGGAAGTCTGTCCTTTGAAGTACCTTTTCCAGACCAGAACTGAAGACCAATGTTTGGATGCTCAAACAGTGATGCAGAGTAGGAATGTTGCCGATTACTTTGTTTAACCCGTTGAAAGCCATCCATCTGTACTCGTGGCTTTGTGTTGATAAAAAGTCTGTGATAAGGGTTGTACCCATTCATCAGTTCTTTTTTTAAAATGATTGATGTTAGTGTTCCCTGATATTTTTTTTATTGTATAAATTCGTTACAGTTGCAGTAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CA761460 [ GACGA GCCAAGGAGGTCCAATTGCAACCTTTAAATCTAATTCCAGCACCCCCCTTAGCAGGTGCTGCACATAAACAGGTTGATGGCCCCCCAGAAGCACGGCCAATTGAGGAGAATCGAGTTCACCAGTAGCAAGTTCAGAAGCCCTCCAGCGCTGGCCAGGTTCAACTCAAGGAATAACGCCTTGTCACCTCACCAAAAGATGCGGCTAGCATCTGGCTCAGGAAATGCCAGCAAAATATGCTTCAGTGTTCAGAAGAGAGTGATCCTAGGTTCACCTGCTCCAGTGAAAAGCAGTTTGCTCTCTGGTACTGGGGTTTTCAATCCAGCTTTGCGCGAGAAAATGATGGCGGCGAAAATAGGGAATGCGCAGCGCGTGTTCAACACCAACAGGAGGAAGTCTGTCCTTTGAAGTACCTTTTCCAGACCAGAACTGAAGACCAATGTTTGGATGCTCAAACAGTGATGCAGAGTAGGAATGTTGCCGATTACTTTGTTTAACCCGTTGAAAGCCATCCATCTGTACTCGTGGCTTTGTGTTGATAAAAAGTCTGTGATAAGGGTTGTACCCATTCATCAGTTCTTTTTTTAAAATGATTGATGTTAGTGTTCCCTGATATTTTTTTTATTGTATAAATTCGTTACAGTTGCAGTAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CA761462 [ GACGA GCCAAGGAGGTCCAATTGCAACCTTTAAATCTAATTCCAGCACCCCCCTTAGCAGGTGCTGCACATAAACAGGTTGATGGCCCCCCAGAAGCACGGCCAATTGAGGAGAATCGAGTTCACCAGTAGCAAGTTCAGAAGCCCTCCAGCGCTGGCCAGGTTCAACTCAAGGAATAACGCCTTGTCACCTCACCAAAAGATGCGGCTAGCATCTGGCTCAGGAAATGCCAGCAAAATATGCTTCAGTGTTCAGAAGAGAGTGATCCTAGGTTCACCTGCTCCAGTGAAAAGCAGTTTGCTCTCTGGTACTGGGGTTTTCAATCCAGCTTTGCGCGAGAAAATGATGGCGGCGAAAATAGGGAATGCGCAGCGCGTGTTCAACACCAACAGGAGGAAGTCTGTCCTTTGAAGTACCTTTTCCAGACCAGAACTGAAGACCAATGTTTGGATGCTCAAACAGTGATGCAGAGTAGGAATGTTGCCGATTACTTTGTTTAACCCGTTGAAAGCCATCCATCTGTACTCGTGGCTTTGTGTTGATAAAAAGTCTGTGATAAGGGTTGTACCCATTCATCAGTTCTTTTTTTAAAATGATTGATGTTAGTGTTCCCTGATATTTTTTTTATTGTATAAATTCGTTACAGTTGCAGTAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CA761420 [ GACGA GCCAAGGAGGTCCAATTGCAACCTTTAAATCTAATTCCAGCACCCCCCTTAGCAGGTGCTGCACATAAACAGGTTGATGGCCCCCCAGAAGCACGGCCAATTGAGGAGAATCGAGTTCACCAGTAGCAAGTTCAGAAGCCCTCCAGCGCTGGCCAGGTTCAACTCAAGGAATAACGCCTTGTCACCTCACCAAAAGATGCGGCTAGCATCTGGCTCAGGAAATGCCAGCAAAATATGCTTCAGTGTTCAGAAGAGAGTGATCCTAGGTTCACCTGCTCCAGTGAAAAGCAGTTTGCTCTCTGGTACTGGGGTTTTCAATCCAGCTTTGCGCGAGAAAATGATGGCGGCGAAAATAGGGAATGCGCAGCGCGTGTTCAACACCAACAGGAGGAAGTCTGTCCTTTGAAGTACCTTTTCCAGACCAGAACTGAAGACCAATGTTTGGATGCTCAAACAGTGATGCAGAGTAGGAATGTTGCCGATTACTTTGTTTAACCCGTTGAAAGCCATCCATCTGTACTCGTGGCTTTGTGTTGATAAAAAGTCTGTGATAAGGGTTGTACCCATTCATCAGTTCTTTTTTTAAAATGATTGATGTTAGTGTTCCCTGATATTTTTTTTATTGTATAAATTCGTTACAGTTGCAGTAAAAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||