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Oryza sativa
cluster # 8508 cluster # 8508       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8508#0 length = 2446 sequences # 5  

consensusID : consensus_8508#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2446
fasta sequence
                              [AGACCGCCGCCGCCGCCGCCAAAAAAACCCGTAAACCCTAGCTCACGACGGCCGGCGTCGCGCCGCCGCCCCATGCCTAGCTGCTGCTGCCTCCTCGGCCTCGGCTTCCCCTCGCCGCCCTCCGCCCTCCGCATCCTGCGCCGCCGCATGGCCTCTCGCGCCTTCCAGCTCCGCCTCAACCCGCTCACCGGCGACTCCGAATGGCTCGTCGTTGAGGAGGAGGAGGAGGAGGACCACCACCCGACACCGCCACCCAAGCAGCTTCTCGCCACCACCTCCTACCTCGACATGCTCAACGACTCCGCCCGGAACCGCGCATACCGCCGCGCCATCGAAGCCGCCGTCACCGACCCTTCCTCGCGCGTCCTCGACATTGGAGCTGGGACTGGGTTGCTATCCATGATGGCCGCCCGAGCTTTGGCAGCTGTTGGGGGTGAAACTAGAGGAGGAAGTGTTTCAGCATGTGAATCTTACCTCCCAATGGGAAAATTGATGCGAAGGGTACTGAGAGCCAATGGGATGGAAAACAGGGTCAAAGTCTTTCACAAGCGTTCGGATGAGCTCAAAGTCAGAGATGACCTGGATTCACCAGCTGATATATTGGTAAGTGAAATTCTTGATTCTGAGCTGTTGGGCGAGGGTCTGATACCTACTTTACAGCAAGCATATGACATGTTATTGGCAAAAAATCCAAAGATAGTTCCTTATCGAGCCACTACATATGGGC----AGTTGAAAGTACATTCTTGTGGAAGCTACATGATTTGCACAACAATGAAGCAAATGCTGCAGACGGTGTATGGCTTACTCCTGGTGAGATGGAGAGGATTGTGTCTGTGAAGCCACAACAACATGCAATGCAATGTGATGCACTAGAAGATGAGATACGATTGCTGTCAGAACCCTTCAAAGTTTTTGAATTTGACTTTTGGAAACGGCCAGATAGTCATCGTGAGGCCAATATCAAGATACGAACAACACGAGATGGATATGTTCATGCTATTATTTCATGGTGGGTACTTCAATTGGATTCTGCTGGGTCAATCTTCTACTCAACTGCTCCTAGATGGGCGAGACAATCAAGTAGTGAGGGGCCGCAACGCGACATGAAGGATTGGTGTGATCACTGGAAGCAGTGTGTATGGTTCATGCAAGGCAAGGGGATCCCTGCTACGGAAGACCAAGTTCTTTCGTTACGAGCTAGACATAACCAAACCAGCATCTCCTATCAGCTGAACATCAATGATGAAGCATGTGATAGAAGTTCCAAAGGTGACCATCTAACGTTGTTGCCAGAACGGATTGCACTTTATGGTGATAAAGATTGGAGATCAGCTCTGATAAATACCATTAAAAATGCTTTAACTGTGAAATCTTCCCCAACTTGTGTTGTGGCTGACGACAGCATGTTCTTGGCTCTCTTAATTTCCTCCATGTCACCCACTTCAAAAGTCATCGCGATGTACCCTGGTCTACGGGACAAGGGTGCAGCCTATCTTCGATCTGTTGCAGATGCAAATAATTTTTCCATAGACCAGATTCAAGTGATTGGTAAAAGAGCCTCATCTATTACAGCTGATGACCTGAAACATAAAAAGGTTAATTTATTAGTGGGGGAGCCATTTTATCTTGGAAGTG--TGAATGCTTCCGTGGCAAAATCTACGTTTCTGGAGTGTGAGGACCCTACTTG--ACTCGATGTTATCTGAGGATGCATTCATCATGCCTTGTAAAGGAATACTAAAGCTATGTGCAATGTCACTTCCGGACTTATGGAGGAGCCGTAGCAGCCTTAAAGATGTAGAGGGTTTTGATCACTCAGTTGTCAATGAGACTTTAGGAGCCTGTGGTTGCCTGCCTGGAGACCAGCAAGGTCCTTGTCTGCCGTATTACGTATGGCAATGTGGTTATACCAAGAAATTAAGTAAAGTGTACTCTCTGATGGATTTCAACTTTTCTGAGCCAATCCACTCCTGTTTTGGGAAAACAAAGATCGAGTTTTCTCATGATGGAACATGCCATGGTTTTGCGGTTTGGATTGATTGGGTTCTTGATGAGAGAAAATCCGTTGTGTTAACAACCGGACCAGATAACCGATACTGGAAACAAGGAGTACAGCTCTTTAGCAAGCCTGTAGAAGTAAATCCAGGCAAGTCGGTGATGCATGTAGAGGCGTCCTTCGATCCTTCCACGGGTGAGATAACGTTCAGCAGTTCATCAACAACCTGCTCCTGAGGCGATGCTGTATTGCTATGCCATCTGTGTGTGCGCCTATGCAACATGGGAAGCATATTGCTTGCGTAATTCGGCCCAGCGATTACGGCGCACCGTAGGACATTAGTGTTTTCATCCCGCAGATATTTGGCAGTGGTTATTTGTGCGTAGGCCACAAACCGTTCAGTCCAAAACGTCTTAACTTTTGTTCTAAAATTGAGATGCAAAAAAGGGGAAA]

[+] EMBL AK099594             [AGACCGCCGCCGCCGCCGCCAAAAAAACCCGTAAACCCTAGCTCACGACGGCCGGCGTCGCGCCGCCGCCCCATGCCTAGCTGCTGCTGCCTCCTCGGCCTCGGCTTCCCCTCGCCGCCCTCCGCCCTCCGCATCCTGCGCCGCCGCATGGCCTCTCGCGCCTTCCAGCTCCGCCTCAACCCGCTCACCGGCGACTCCGAATGGCTCGTCGTTGAGGAGGAGGAGGAGGAGGACCACCACCCGACACCGCCACCCAAGCAGCTTCTCGCCACCACCTCCTACCTCGACATGCTCAACGACTCCGCCCGGAACCGCGCATACCGCCGCGCCATCGAAGCCGCCGTCACCGACCCTTCCTCGCGCGTCCTCGACATTGGAGCTGGGACTGGGTTGCTATCCATGATGGCCGCCCGAGCTTTGGCAGCTGTTGGGGGTGAAACTAGAGGAGGAAGTGTTTCAGCATGTGAATCTTACCTCCCAATGGGAAAATTGATGCGAAGGGTACTGAGAGCCAATGGGATGGAAAACAGGGTCAAAGTCTTTCACAAGCGTTCGGATGAGCTCAAAGTCAGAGATGACCTGGATTCACCAGCTGATATATTGGTAAGTGAAATTCTTGATTCTGAGCTGTTGGGCGAGGGTCTGATACCTACTTTACAGCAAGCATATGACATGTTATTGGCAAAAAATCCAAAGATAGTTCCTTATCGAGCCACTACATATGGGCAGCTAGTTGAAAGTACATTCTTGTGGAAGCTACATGATTTGCACAACAATGAAGCAAATGCTGCAGACGGTGTATGGCTTACTCCTGGTGAGATGGAGAGGATTGTGTCTGTGAAGCCACAACAACATGCAATGCAATGTGATGCACTAGAAGATGAGATACGATTGCTGTCAGAACCCTTCAAAGTTTTTGAATTTGACTTTTGGAAACGGCCAGATAGTCATCGTGAGGCCAATATCAAGATACGAACAACACGAGATGGATATGTTCATGCTATTATTTCATGGTGGGTACTTCAATTGGATTCTGCTGGGTCAATCTTCTACTCAACTGCTCCTAGATGGGCGAGACAATCAAGTAGTGAGGGGCCGCAACGCGACATGAAGGATTGGTGTGATCACTGGAAGCAGTGTGTATGGTTCATGCAAGGCAAGGGGATCCCTGCTACGGAAGACCAAGTTCTTTCGTTACGAGCTAGACATAACCAAACCAGCATCTCCTATCAGCTGAACATCAATGATGAAGCATGTGATAGAAGTTCCAAAGGTGACCATCTAACGTTGTTGCCAGAACGGATTGCACTTTATGGTGATAAAGATTGGAGATCAGCTCTGATAAATACCATTAAAAATGCTTTAACTGTGAAATCTTCCCCAACTTGTGTTGTGGCTGACGACAGCATGTTCTTGGCTCTCTTAATTTCCTCCATGTCACCCACTTCAAAAGTCATCGCGATGTACCCTGGTCTACGGGACAAGGGTGCAGCCTATCTTCGATCTGTTGCAGATGCAAATAATTTTTCCATAGACCAGATTCAAGTGATTGGTAAAAGAGCCTCATCTATTACAGCTGATGACCTGAAACATAAAAAGGTTAATTTATTAGTGGGGGAGCCATTTTATCTTGGAAGTG  TGAATGCTTCCGTGGCAAAATCTACGTTTCTGGAGTGTGAGGACCCTACTTG  ACTCGATGTTATCTGAGGATGCATTCATCATGCCTTGTAAAGGAATACTAAAGCTATGTGCAATGTCACTTCCGGACTTATGGAGGAGCCGTAGCAGCCTTAAAGATGTAGAGGGTTTTGATCACTCAGTTGTCAATGAGACTTTAGGAGCCTGTGGTTGCCTGCCTGGAGACCAGCAAGGTCCTTGTCTGCCGTATTACGTATGGCAATGTGGTTATACCAAGAAATTAAGTAAAGTGTACTCTCTGATGGATTTCAACTTTTCTGAGCCAATCCACTCCTGTTTTGGGAAAACAAAGATCGAGTTTTCTCATGATGGAACATGCCATGGTTTTGCGGTTTGGATTGATTGGGTTCTTGATGAGAGAAAATCCGTTGTGTTAACAACCGGACCAGATAACCGATACTGGAAACAAGGAGTACAGCTCTTTAGCAAGCCTGTAGAAGTAAATCCAGGCAAGTCGGTGATGCATGTAGAGGCGTCCTTCGATCCTTCCACGGGTGAGATAACGTTCAGCAGTTCATCAACAACCTGCTCCTGAGGCGATGCTGTATTGCTATGCCATCTGTGTGTGCGCCTATGCAACATGGGAAGCATATTGCTTGCGTAATTCGGCCCAGCGATTACGGCGCACCGTAGGACATTAGTGTTTTCATCCCGCAGATATTTGGCAGTGGTTATTTGTGCGTAGGCCACAAACCGTTCAGTCCAAAACGTCTTAACTTTTGTTCTAAAATTGAGATGCAAAAAAGGGGAAA]
[+] EMBL CB631646             [                                                                   GCCCCATGCCTAGCTGCTGCTGCCTCCTCGGCCTCGGCTTCCCCTCGCCGCCCTCCGCCCTCCGCATCCTGCGCCGCCGCATGGCCTCTCGCGCCTTCCAGCTCCGCCTCAACCCGCTCACCGGCGACTCCGAATGGCTCGTCGTTGAGGAGGAGGAGGAGGAGGACCACCACCCGACACCGCCACCCAAGCAGCTTCTCGCCACCACCTCCTACCTCGACATGCTCAACGACTCCGCCCGGAACCGCGCATACCGCCGCGCCATCGAAGCCGCCGTCACCGACCCTTCCTCGCGCGTCCTCGACATTGGAGCTGGGACTGGGTTGCTATCCATGATGGCCGCCCGAGCTTTGGCAGCTGTTGGGGGTGAAACTAGAGGAGGAAGTGTTTCAGCATGTGAATCTTACCTCCCAATGGGAAAATTGATGCGAAGGGTACTGAGAGCCAATGGGATGGAAAACAGGGTCAAAGTCTTTCACAAGCGTTCGGATGAGCTCAAAGTCGGAGATGACCTGGATTCACCAGCTGATATATTGGTAAGTGAAATTCTTGATTCTGAGCTGTTGGGCGAGGGTCTGATACCTACTTTACAGCAAGCATATGACATGTTATTGGCAAAAAATCCAAAGATAGTTCCTTATCGAGCCACTACATATGGGC    AGTTGAAAGTACATTCTTGTGGAAGCTACATGATTTGCACAACAATGAAGCAAATGCTGCAAACGGTGTATGGCTGACTCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF305946             [                                                                                                                                                                                                                                                                   AGCTTCTCGCCACCACCTCCTACCTCGACATGCTCAACGACTCCGCCCGGAACCGCGCATACCGCCGCGCCATCGAAGCCGCCGTCACCGACCCTTCCTCGCGCGTCCTCGACATTGGAGCTGGGACTGGGTTGTTATCCATGATGGCCGCCCGAGCTTTGGCAGCTGTTGGGGGTGAAACTAGAGGAGGAAGTGTTTCAGCATGTGAATCTTACCTCCCAATGGGAAAATTGATGCGAAGGGTACTGAGAGCCAATGGGATGGAAAACAGGGTCAAAGTCTTTCACAAGCGTTCGGATGAGCTCAAAGTCAGAGATGACCTGGATTCACCAGCTGATATATTGGTAAGTGAAATTCTTGATTCTGAGCTGTTGGGCGAGGGTCTGATACCTACTTTACAGCAAGCATATGACATGTTATTGGCAAAAAATCCAAAGATAGTTCCTTATCGAGCCACTACATATGGGC    AGTTGAAAGTACATTCTTGTGGAAGCTACATGATTTGCACAACAATGAAGCAAATGCTGCAGACGGTGTATGGCTTACTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL D42297               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CCTCATCTATTACAGCTGATGACCTGAAACATAAAAAGGTTAATTTATTAGTGGGGGAGCCATTTTATCTTGGAAGTGAAGGAATGCT  CGTGGCAAAATCTACG TTCTGGAGTGTGAGGACCCTACTTGCAACTCGATGTTATCTGAGGAAGCATTCATCATGCCTTGTAAAGGAATACTAAAGCTATGTGCAATGTCACTACCGa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB631647             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATGTTATCTGAGGATGCATTCATCATGCCTTGTAAAGGAATACTAAAGCTATGTGCAATGTCACTTCCGGACTTATGGAGGAGCCGTAGCAGCCTTAAAGATGTAGAGGGTTTTGATCACTCAGTTGTCAATGAGACTTTAGGAGCCTGTGGTTACCTGCCTGGAGACCAGCAAGGTCCTTGTCTGCCGTATTATGTATGGCAATGTGGTTATACCAAGAAATTAAGTAAAGTGTACTCTCTGATGGATTTCAACTTTTCTGAGCCAATCCACTCCTGTTTTGGGAAAACAAAGATCGAGTTTTCTCATGATGGAACATGCCATGGTTTTGCGGTTTGGATTGATTGGGTTCTTGATGAGAGAAAATCCGTTGTGTTAACAACCGGACCAGATAACCGATACTGGAAACAAGGAGTACAGCTCTTTGGCAAGCCTGTAGAAGTAAATCCAGGCAAGTCGGTGATGCATGTAGAGGCGTCCTTCGATCCTTCCACGGGTGAGATAACGTTCAGCAGTTCATCAACAACCTGCTCCTGAGGCGATGCTGTATTGCTATGCCATCTGTGTGTGCGCCTATGCAACATGGGAAGCATATTGCTTGCGTAATTCGGCCCAGCGATTACGGCGCACCGTAGGACATTAGTGTTTTCATCCCGCAGATATTTGGCAGTGGTTATTTGTGCGTAGGCCACAAACCGTTCAGTCCAAAACGTCTTAAC                                   ]


>consensus_8508#0 AGACCGCCGCCGCCGCCGCCAAAAAAACCCGTAAACCCTAGCTCACGACGGCCGGCGTCG CGCCGCCGCCCCATGCCTAGCTGCTGCTGCCTCCTCGGCCTCGGCTTCCCCTCGCCGCCC TCCGCCCTCCGCATCCTGCGCCGCCGCATGGCCTCTCGCGCCTTCCAGCTCCGCCTCAAC CCGCTCACCGGCGACTCCGAATGGCTCGTCGTTGAGGAGGAGGAGGAGGAGGACCACCAC CCGACACCGCCACCCAAGCAGCTTCTCGCCACCACCTCCTACCTCGACATGCTCAACGAC TCCGCCCGGAACCGCGCATACCGCCGCGCCATCGAAGCCGCCGTCACCGACCCTTCCTCG CGCGTCCTCGACATTGGAGCTGGGACTGGGTTGCTATCCATGATGGCCGCCCGAGCTTTG GCAGCTGTTGGGGGTGAAACTAGAGGAGGAAGTGTTTCAGCATGTGAATCTTACCTCCCA ATGGGAAAATTGATGCGAAGGGTACTGAGAGCCAATGGGATGGAAAACAGGGTCAAAGTC TTTCACAAGCGTTCGGATGAGCTCAAAGTCAGAGATGACCTGGATTCACCAGCTGATATA TTGGTAAGTGAAATTCTTGATTCTGAGCTGTTGGGCGAGGGTCTGATACCTACTTTACAG CAAGCATATGACATGTTATTGGCAAAAAATCCAAAGATAGTTCCTTATCGAGCCACTACA TATGGGCAGTTGAAAGTACATTCTTGTGGAAGCTACATGATTTGCACAACAATGAAGCAA ATGCTGCAGACGGTGTATGGCTTACTCCTGGTGAGATGGAGAGGATTGTGTCTGTGAAGC CACAACAACATGCAATGCAATGTGATGCACTAGAAGATGAGATACGATTGCTGTCAGAAC CCTTCAAAGTTTTTGAATTTGACTTTTGGAAACGGCCAGATAGTCATCGTGAGGCCAATA TCAAGATACGAACAACACGAGATGGATATGTTCATGCTATTATTTCATGGTGGGTACTTC AATTGGATTCTGCTGGGTCAATCTTCTACTCAACTGCTCCTAGATGGGCGAGACAATCAA GTAGTGAGGGGCCGCAACGCGACATGAAGGATTGGTGTGATCACTGGAAGCAGTGTGTAT GGTTCATGCAAGGCAAGGGGATCCCTGCTACGGAAGACCAAGTTCTTTCGTTACGAGCTA GACATAACCAAACCAGCATCTCCTATCAGCTGAACATCAATGATGAAGCATGTGATAGAA GTTCCAAAGGTGACCATCTAACGTTGTTGCCAGAACGGATTGCACTTTATGGTGATAAAG ATTGGAGATCAGCTCTGATAAATACCATTAAAAATGCTTTAACTGTGAAATCTTCCCCAA CTTGTGTTGTGGCTGACGACAGCATGTTCTTGGCTCTCTTAATTTCCTCCATGTCACCCA CTTCAAAAGTCATCGCGATGTACCCTGGTCTACGGGACAAGGGTGCAGCCTATCTTCGAT CTGTTGCAGATGCAAATAATTTTTCCATAGACCAGATTCAAGTGATTGGTAAAAGAGCCT CATCTATTACAGCTGATGACCTGAAACATAAAAAGGTTAATTTATTAGTGGGGGAGCCAT TTTATCTTGGAAGTGTGAATGCTTCCGTGGCAAAATCTACGTTTCTGGAGTGTGAGGACC CTACTTGACTCGATGTTATCTGAGGATGCATTCATCATGCCTTGTAAAGGAATACTAAAG CTATGTGCAATGTCACTTCCGGACTTATGGAGGAGCCGTAGCAGCCTTAAAGATGTAGAG GGTTTTGATCACTCAGTTGTCAATGAGACTTTAGGAGCCTGTGGTTGCCTGCCTGGAGAC CAGCAAGGTCCTTGTCTGCCGTATTACGTATGGCAATGTGGTTATACCAAGAAATTAAGT AAAGTGTACTCTCTGATGGATTTCAACTTTTCTGAGCCAATCCACTCCTGTTTTGGGAAA ACAAAGATCGAGTTTTCTCATGATGGAACATGCCATGGTTTTGCGGTTTGGATTGATTGG GTTCTTGATGAGAGAAAATCCGTTGTGTTAACAACCGGACCAGATAACCGATACTGGAAA CAAGGAGTACAGCTCTTTAGCAAGCCTGTAGAAGTAAATCCAGGCAAGTCGGTGATGCAT GTAGAGGCGTCCTTCGATCCTTCCACGGGTGAGATAACGTTCAGCAGTTCATCAACAACC TGCTCCTGAGGCGATGCTGTATTGCTATGCCATCTGTGTGTGCGCCTATGCAACATGGGA AGCATATTGCTTGCGTAATTCGGCCCAGCGATTACGGCGCACCGTAGGACATTAGTGTTT TCATCCCGCAGATATTTGGCAGTGGTTATTTGTGCGTAGGCCACAAACCGTTCAGTCCAA AACGTCTTAACTTTTGTTCTAAAATTGAGATGCAAAAAAGGGGAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)