|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8516#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2061 fasta sequence
[GATATTTATATGTGCTCCGTTCATGAGGGGGCAGTTGCCGCGAGAGAGATGGCGGCGGCGGTGCTGAACGCCCTCGCGCCGGCGGCCACCGTCGCGCAGCTCGCCGGCGCGGACGCGGCGGGGCTGGTGTCGGCGATCCTGCAGGCGGTGCGGGCGGCCCGGCGGAACCGGAGGGAGTGCCGCCTCCTGGCGCGGCGCGCGATGATGGTGGGCGACCTGCTGCGGCTGCTGCCGCCGGAGTCGGAGACGATGCGGCGGCCGGAGGTGAGGCGGGCGCTGGACGGGCTGGGCGGCGCGCTCCGGCAGGCGCTGGAGCTCGTGGAATCGTGCCAGGAGAGCGGCGCCGTGCGCGGCTTGATGACGGCGGGGAGGCAGGCGGAGCAGTTCAGGGAGGTGCAGGGCGAGATCAACGACTACATGCTACTCTTCCCCGTCGTCAGCCACATCGACATCACCCGCCGCCTCGACCTGATTTACGGCCTGCTGCTTCCTGCAGACTCTCAACCCCACCAGATGCCAGAGGATGCGCCAGGTTCACCTGGCGACCATTTTGAAGCTGATGTTAGGAATGTGGAGATCACTGTAGCTGAGGTAATTCCGTTTGAAAGCAATCAAACTATAACAGAGCCTTTTGAGTTCGGTGAACACCATGTAGCAGGTCATCAGGAAGGTTTGGAAGAGCTGCTGTCCAAAGTGCAGAGGTTGAAATGGCTTTGCTGGTGGTCTCAGCATGATTCTCTAGAGCGTCCATCAACTTATGACTTATTAAAGGCTGCTACAAATAATTTCTCATCTAAAAGTAAAATTGCAAGTGGGGGTTGGGCTACTGTTTACAAGGCTCAAATGCGTAATAGTCTTGAGATTGCAATCAAAGTATATCCTATGGGCACGGGAGAAAAACGTGTATTTTCCCAGTACGAAAGGGAGCTTAATTTACTTACGAAGCTTCAGCATACGAATATAATTAAACTTCTTGGACACTGCACTGGAGAATGGGAGCTGATTTTGATATATGAATATATGCCCAATGGGAGCTTGGACAAATTTATACATGGCCCAAATAGAGAAGTATCGTTTGACTGGTTTTCGTGCTTCAAAATAATTCAAGGGATAGCAGAGGGTCTGCTCTATCTACACACGTATGAAGCTGAGATATGCATTGTGCATAGGGATTTGAAACCGAGCAACATTCTGCTTGATTCAGATATGAATGCTAAGATAGGTGATTTTGGTATAGCTAAAACTATAAGCCCGGCACGGCAGCAAGACACATATGTATCAGGCACATTTGGGTATATTGCTCCTGAATATCTTCGTGGAGGTATTTTATCAACAAAGGTTGATGTATATGCCTATGGTGTCATTCTTCTAGAGATTATTACTGGCAGGAGGTCCTGTATTCCCTGTCTAAAAGATGATGAGTATGTGCATTTAACTGAGTATGCCTGGGATCTATGGAGAACCGGAAGATCAGCTGAGCTTCTAGATGCAGCATTGCGCAATGAGGCTCGAATTGCTGAGATAACAAGCTGCATTCAGATAGCGTTGTTGTGTGTTCAGAAGGATCCGGCTGACCGGCCTTCCATGTTGGATGTGCTTGCGATGCTAAGAGATGAGAAGATTGTAGCTGCCCCTAAGAAACCAGGTGATCTTCTCCTTGGAGACGAAACGAGCGTAGAGTCAGGTGATCTTCTCCTTGGAGAGGAAACGAGTGGAGAGACTGCACATTGGTTCGCAAGCAGCGGCGCTACTTGCAGTTCTACTGAGTTCACGGTGCCCCGGTGAGAAGAGATTTTGTCATATTTGAAGCTGGTGGCTACTTAAGGTGCAAGTACGTTATGTATAAAGCTATTACCTTTGATTATTCACAGCGTTGCAAGCAAAATAAGCATGGTGAATGTGTATTTCAGATTCTGAGTAATTATGGATTTACCATATGTGATGGAAATAAATTAAACATACAGAAGGTGGAATGTATAGTATATCATAAATATTTTAGACAAAATTGGCTACAAGCAATATAATTCTGTGGCATTTGCTTATGGGCGAAAGTAAAAAACC]
[+] EMBL AK068357 [GATATTTATATGTGCTCCGTTCATGAGGGGGCAGTTGCCGCGAGAGAGATGGCGGCGGCGGTGCTGAACGCCCTCGCGCCGGCGGCCACCGTCGCGCAGCTCGCCGGCGCGGACGCGGCGGGGCTGGTGTCGGCGATCCTGCAGGCGGTGCGGGCGGCCCGGCGGAACCGGAGGGAGTGCCGCCTCCTGGCGCGGCGCGCGATGATGGTGGGCGACCTGCTGCGGCTGCTGCCGCCGGAGTCGGAGACGATGCGGCGGCCGGAGGTGAGGCGGGCGCTGGACGGGCTGGGCGGCGCGCTCCGGCAGGCGCTGGAGCTCGTGGAATCGTGCCAGGAGAGCGGCGCCGTGCGCGGCTTGATGACGGCGGGGAGGCAGGCGGAGCAGTTCAGGGAGGTGCAGGGCGAGATCAACGACTACATGCTACTCTTCCCCGTCGTCAGCCACATCGACATCACCCGCCGCCTCGACCTGATTTACGGCCTGCTGCTTCCTGCAGACTCTCAACCCCACCAGATGCCAGAGGATGCGCCAGGTTCACCTGGCGACCATTTTGAAGCTGATGTTAGGAATGTGGAGATCACTGTAGCTGAGGTAATTCCGTTTGAAAGCAATCAAACTATAACAGAGCCTTTTGAGTTCGGTGAACACCATGTAGCAGGTCATCAGGAAGGTTTGGAAGAGCTGCTGTCCAAAGTGCAGAGGTTGAAATGGCTTTGCTGGTGGTCTCAGCATGATTCTCTAGAGCGTCCATCAACTTATGACTTATTAAAGGCTGCTACAAATAATTTCTCATCTAAAAGTAAAATTGCAAGTGGGGGTTGGGCTACTGTTTACAAGGCTCAAATGCGTAATAGTCTTGAGATTGCAATCAAAGTATATCCTATGGGCACGGGAGAAAAACGTGTATTTTCCCAGTACGAAAGGGAGCTTAATTTACTTACGAAGCTTCAGCATACGAATATAATTAAACTTCTTGGACACTGCACTGGAGAATGGGAGCTGATTTTGATATATGAATATATGCCCAATGGGAGCTTGGACAAATTTATACATGGCCCAAATAGAGAAGTATCGTTTGACTGGTTTTCGTGCTTCAAAATAATTCAAGGGATAGCAGAGGGTCTGCTCTATCTACACACGTATGAAGCTGAGATATGCATTGTGCATAGGGATTTGAAACCGAGCAACATTCTGCTTGATTCAGATATGAATGCTAAGATAGGTGATTTTGGTATAGCTAAAACTATAAGCCCGGCACGGCAGCAAGACACATATGTATCAGGCACATTTGGGTATATTGCTCCTGAATATCTTCGTGGAGGTATTTTATCAACAAAGGTTGATGTATATGCCTATGGTGTCATTCTTCTAGAGATTATTACTGGCAGGAGGTCCTGTATTCCCTGTCTAAAAGATGATGAGTATGTGCATTTAACTGAGTATGCCTGGGATCTATGGAGAACCGGAAGATCAGCTGAGCTTCTAGATGCAGCATTGCGCAATGAGGCTCGAATTGCTGAGATAACAAGCTGCATTCAGATAGCGTTGTTGTGTGTTCAGAAGGATCCGGCTGACCGGCCTTCCATGTTGGATGTGCTTGCGATGCTAAGAGATGAGAAGATTGTAGCTGCCCCTAAGAAACCAGGTGATCTTCTCCTTGGAGACGAAACGAGCGTAGAGTCAGGTGATCTTCTCCTTGGAGAGGAAACGAGTGGAGAGACTGCACATTGGTTCGCAAGCAGCGGCGCTACTTGCAGTTCTACTGAGTTCACGGTGCCCCGGTGAGAAGAGATTTTGTCATATTTGAAGCTGGTGGCTACTTAAGGTGCAAGTACGTTATGTATAAAGCTATTACCTTTGATTATTCACAGCGTTGCAAGCAAAATAAGCATGGTGAATGTGTATTTCAGATTCTGAGTAATTATGGATTTACCATATGTGATGGAAATAAATTAAACATACAGAAGGTGGAATGTATAGTATATCATAAATATTTTAGACAAAATTGGCTACAAGCAATATAATTCTGTGGCATTTG ]
[+] EMBL AK099236 [ CGAGAGAGATGGCGGCGGCGGTGCTGAACGCCCTCGCGCCGGCGGCCACCGTCGCGCAGCTCGCCGGCGCGGACGCGGCGGGGCTGGTGTCGGCGATCCTGCAGGCGGTGCGGGCGGCCAGGCGGAACCGGAGGGAGTGCCGCCTCCTGGCGCGGCGCGCGATGATGGTGGGCGACCTGCTGCGGCTGCTGCCGCCGGAGTCGGAGACGATGCGGCGGCCGGAGGTGAGGCGGGCGCTGGACGGGCTGGGCGGCGCGCTCCGGCAGGCGCTGGAGCTCGTGGAATCGTGCCAGGAGAGCGGCGCCGTGCGCGGCTTGATGACGGCGGGGAGGCAGGCGGAGCAGTTCAGGGAGGTGCAGGGCGAGATCAACGACTACATGCTACTCTTCCCCGTCGTCAGCCACATCGACATCACCCGCCGCCTCGACCTGATTTACGGCCTGCTGCTTCCTGCAGACTCTCAACCCCACCAGATGCCAGAGGATGCGCCAGGTTCACCTGGCGACCATTTTGAAGCTGATGTTAGGAATGTGGAGATCACTGCAGCTGAGGTAATTCCGTTTGAAAGCAATCAAACTATAACAGAGCCTTTTGAGTTCGGTGAACACCATGTAGCAGGTCATCAGGAAGGTTTGGAAGAGCTGCTGTCCAAAGTGCAGAGGTTGAAATGGCTTTGCTGGTGGTCTCAGCATGATTCTCTAGAGCGTCCATCAACTTATGACTTATTAAAGGCTGCTACAAATAATTTCTCATCTAAAAGTAAAATTGCAAGTGGGGGTTGGGCTACTGTTTACAAGGCTCAAATGCGTAATAGTCTTGAGATTGCAATCAAAGTATATCCTATGGGCACGGGAGAAAAACGTGTATTTTCCCAGTACGAAAGGGAGCTTAATTTACTTACGAAGCTTCAGCATACGAATATAATTAAACTTCTTGGACACTGCACTGGAGAATGGGAGCTGATTTTGATATATGAATATATGCCCAATGGGAGCTTGGACAAATTTATACATGGCCCAAATAGAGAAGTATCGTTTGACTGGTTTTCGTGCTTCAAAATAATTCAAGGGATAGCAGAGGGTCTGCTCTATCTACACACGTATGAAGCTGAGATATGCATTGTGCATAGGGATTTGAAACCGAGCAACATTCTGCTTGATTCAGATATGAATGCTAAGATAGGTGATTTTGGTATAGCTAAAACTATAAGCCCGGCACGGCAGCAAGACACATATGTATCAGGCACATTTGGGTATATTGCTCCTGAATATCTTCGTGGAGGTATTTTATCAACAAAGGTTGATGTATATGCCTATGGTGTCATTCTTCTAGAGATTATTACTGGCAGGAGGTCCTGTATTCCCTGTCTAAAAGATGATGAGTATGTGCATTTAACTGAGTATGCCTGGGATCTATGGAGAACCGGAAGATCAGCTGAGCTTCTAGATGCAGCATTGCGCAATGAGGCTCGAATTGCTGAGATAACAAGCTGCATTCAGATAGCGTTGTTGTGTGTTCAGAAGGATCCGGCTGACCGGCCTTCCATGTTGGATGTGCTTGCGATGCTAAGAGATGAGAAGATTGTAGCTGCCCCTAAGAAACCAGGTGATCTTCTCCTTGGAGACGAAACGAGCGTAGAGTCAGGTGATCTTCTCCTTGGAGAGGAAACGAGTGGAGAGACTGCACATTGGTTCGCAAGCAGCGGCGCTACTTGCAGTTCTACTGAGTTCACGGTGCCCCGGTGAGAAGAGATTTTGTCATATTTGAAGCTGGTGGCTACTTAAGGTGCAAGTACGTTATGTATAAAGCTATTACCTTTGATTATTCACAGCGTTGCAAGCAAAATAAGCATGGTGAATGTGTATTTCAGATTCTGAGTAATTATGGATTTACCATATGTGATGGAAATAAATTAAACATACAGAAGGTGGAATGTATAGTATATCATAAATATTTTAGACAAAATTGGCTACAAGCAATATAATTCTGTGGCATTTGCTTATGGGCGAAAGTAAAAAACC]
[-] EMBL CB677861 [ TGGCAGGAGTTCCGGTATTCCCTGTCTAAAAGATGATGAGTATGTGCATTTAACTGAGTATGCCTGGGATCTATGGAGAACCGGAAGATCAGCTGAGCTTTTAGATGCAGCATTGCGCAATGAGGCTCGAATTGGTGAGATAACAAGCTGCATTCAGATAGCGTTGTTGTGTGTTCAGAAGGATCCGGCTGACCGCCCTTCCATGTTGGATGTGCTTGCGATGTTAAGAGATGAGAAGATTGTAGCTGCCCCTAAGAAACCAGGTGATCTTCTCCTTGGAGACGAAACGAGCGTAGAGTCAGGTGATCTTCTCCTTGGAGAGGAAACGAGTGGAGAGACTGCACATTGGTTCGCAAGCAGCGGCGCTACTTGCAGTTCTACTGAGTTCACGGTGCCCCGGTGAGAAGAGATTTTGTCATATTTGAAGCTGGTGGCTACTTAAGGTGCAAGTACGTTATGTATAAAGCTATTACCTTTGATTATTCACAGCGTTGCAAGCAAAATAAGCATGGTGAATGTGTATTTCAAAGGGTGAGTAATT ]
consensusID : consensus_8516#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 616 fasta sequence
[GGTCCTTGGAGAGATCATCAACATCACCCGCCGCCTCGACCTGATTTACGGCCTGCTGCTTCCTGCAGACTCTCAACCCCACCATATGCCAGAGGATGCGCCAGGTTCACCTGGCGACCATTTTGAAGCTGATGTTACGAATGTGGAGATCACTGCATCTGAGGAAATTCCGTTTGAAACCAATCAAACTATAACAGAGCCTTTTGAGTTCGGCGAACACCATGTAGCGAGACATCAGGAAGGTTTGGAAGAGCTGCTGTCCAAAGTGCAAAGGTTGAAATGGCTTTGCTGGTGGTCTCAGCATGATTCTCTAGAGCGTCCATCAACTTATGACTTATTAAAGGCTGCTACAAATAATTTCTCATCTAAAAGTAAAATTGCAAGTGGGGGGTGGGCTACTGTTTACAAGGCTCAAATGCGTAATAGTCTTGAGATTGCAATCAAAGTATATCCTATGGGCACGGGAGAAAAACGTGTATTTTCCCAGTACGAAAGGGAGCTTAATTTACTTACGAAGCTTCAACATACGAATATAATTAAACTTCTTGGACACTGCACTGGAGAATGGGAGCTGATTCTGATATATGAATATATGCCCAATGGGAGCTTGGACAAA]
[+] EMBL CB677860 [GGTCCTTGGAGAGATCATCAACATCACCCGCCGCCTCGACCTGATTTACGGCCTGCTGCTTCCTGCAGACTCTCAACCCCACCATATGCCAGAGGATGCGCCAGGTTCACCTGGCGACCATTTTGAAGCTGATGTTACGAATGTGGAGATCACTGCATCTGAGGAAATTCCGTTTGAAACCAATCAAACTATAACAGAGCCTTTTGAGTTCGGCGAACACCATGTAGCGAGACATCAGGAAGGTTTGGAAGAGCTGCTGTCCAAAGTGCAAAGGTTGAAATGGCTTTGCTGGTGGTCTCAGCATGATTCTCTAGAGCGTCCATCAACTTATGACTTATTAAAGGCTGCTACAAATAATTTCTCATCTAAAAGTAAAATTGCAAGTGGGGGGTGGGCTACTGTTTACAAGGCTCAAATGCGTAATAGTCTTGAGATTGCAATCAAAGTATATCCTATGGGCACGGGAGAAAAACGTGTATTTTCCCAGTACGAAAGGGAGCTTAATTTACTTACGAAGCTTCAACATACGAATATAATTAAACTTCTTGGACACTGCACTGGAGAATGGGAGCTGATTCTGATATATGAATATATGCCCAATGGGAGCTTGGACAAA]
consensusID : consensus_8516#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 559 fasta sequence
[AGTATTTACCAACAAGTGATGTATATCCTATGGTGTCATTCTTCTAGAGATTATTACTGCAGGAGTCCTGTATGAGTCTAAAAGATGATGAGCCTGGGATCTATGGAGAACCGGAAGATCAGCTGAGCTTCTAGATGCACATTGCCAATGAGGCTCGAATTGCTGAGATAACAAGCTGCATTCAGATAGCGTTGTTGTGTGTTCAGAAGGATCCGGCTGACCGGCCTTCCATGTTGGATGTGCTTGCGATGCTAAGAGATGAGAAGATTGTAGCTGCCCCTAAGAAACCAGGTGATCTTCTCCTTGGAGACGAAACGAGCGTAGAGTCAGGTGATCTTCTCCTTGGAGAGGAAACGAGTGGAGAGACTGCACATTGGTTCGCAAGCAGCGGCGCTACTTGCAGTTCTACTGAGTTCACGGTGCCCCGGTGAGAAGAGATTTTGTCATATTTGAAGCTGGTGGCTACTTAAGGTGCAAGTACGTTATGTATAAAGCTATTACCTTTGATTATTCACAGCGTTGCAAGCAAATAAGCCTGGTGAATGTGTATTTCAAAAAA]
[+] EMBL BI813650 [AGTATTTACCAACAAGTGATGTATATCCTATGGTGTCATTCTTCTAGAGATTATTACTGCAGGAGTCCTGTATGAGTCTAAAAGATGATGAGCCTGGGATCTATGGAGAACCGGAAGATCAGCTGAGCTTCTAGATGCACATTGCCAATGAGGCTCGAATTGCTGAGATAACAAGCTGCATTCAGATAGCGTTGTTGTGTGTTCAGAAGGATCCGGCTGACCGGCCTTCCATGTTGGATGTGCTTGCGATGCTAAGAGATGAGAAGATTGTAGCTGCCCCTAAGAAACCAGGTGATCTTCTCCTTGGAGACGAAACGAGCGTAGAGTCAGGTGATCTTCTCCTTGGAGAGGAAACGAGTGGAGAGACTGCACATTGGTTCGCAAGCAGCGGCGCTACTTGCAGTTCTACTGAGTTCACGGTGCCCCGGTGAGAAGAGATTTTGTCATATTTGAAGCTGGTGGCTACTTAAGGTGCAAGTACGTTATGTATAAAGCTATTACCTTTGATTATTCACAGCGTTGCAAGCAAATAAGCCTGGTGAATGTGTATTTCAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8516#0 GATATTTATATGTGCTCCGTTCATGAGGGGGCAGTTGCCGCGAGAGAGATGGCGGCGGCG 60
consensus_8516#2 ------------------------------------------------------------
consensus_8516#1 ------------------------------------------------------------
consensus_8516#0 GTGCTGAACGCCCTCGCGCCGGCGGCCACCGTCGCGCAGCTCGCCGGCGCGGACGCGGCG 120
consensus_8516#2 ------------------------------------------------------------
consensus_8516#1 ------------------------------------------------------------
consensus_8516#0 GGGCTGGTGTCGGCGATCCTGCAGGCGGTGCGGGCGGCCCGGCGGAACCGGAGGGAGTGC 180
consensus_8516#2 ------------------------------------------------------------
consensus_8516#1 ------------------------------------------------------------
consensus_8516#0 CGCCTCCTGGCGCGGCGCGCGATGATGGTGGGCGACCTGCTGCGGCTGCTGCCGCCGGAG 240
consensus_8516#2 ------------------------------------------------------------
consensus_8516#1 ------------------------------------------------------------
consensus_8516#0 TCGGAGACGATGCGGCGGCCGGAGGTGAGGCGGGCGCTGGACGGGCTGGGCGGCGCGCTC 300
consensus_8516#2 ------------------------------------------------------------
consensus_8516#1 ------------------------------------------------------------
consensus_8516#0 CGGCAGGCGCTGGAGCTCGTGGAATCGTGCCAGGAGAGCGGCGCCGTGCGCGGCTTGATG 360
consensus_8516#2 ------------------------------------------------------------
consensus_8516#1 ------------------------------------------------------------
consensus_8516#0 ACGGCGGGGAGGCAGGCGGAGCAGTTCAGGGAGGTGCAGGGCGAGATCAACGACTACATG 420
consensus_8516#2 ------------------------------------------------------------
consensus_8516#1 ------------------------------------------------------------
consensus_8516#0 CTACTCTTCCCCGTCGTCAGCCACATCGACATCACCCGCCGCCTCGACCTGATTTACGGC 480
consensus_8516#2 ------------------------------------------------------------
consensus_8516#1 ------------------------------------------------------------
consensus_8516#0 CTGCTGCTTCCTGCAGACTCTCAACCCCACCAGATGCCAGAGGATGCGCCAGGTTCACCT 540
consensus_8516#2 ------------------------------------------------------------
consensus_8516#1 ------------------------------------------------------------
consensus_8516#0 GGCGACCATTTTGAAGCTGATGTTAGGAATGTGGAGATCACTGTAGCTGAGGTAATTCCG 600
consensus_8516#2 ------------------------------------------------------------
consensus_8516#1 ------------------------------------------------------------
consensus_8516#0 TTTGAAAGCAATCAAACTATAACAGAGCCTTTTGAGTTCGGTGAACACCATGTAGCAGGT 660
consensus_8516#2 ------------------------------------------------------------
consensus_8516#1 ------------------------------------------------------------
consensus_8516#0 CATCAGGAAGGTTTGGAAGAGCTGCTGTCCAAAGTGCAGAGGTTGAAATGGCTTTGCTGG 720
consensus_8516#2 ------------------------------------------------------------
consensus_8516#1 ------------------------------------------------------------
consensus_8516#0 TGGTCTCAGCATGATTCTCTAGAGCGTCCATCAACTTATGACTTATTAAAGGCTGCTACA 780
consensus_8516#2 ------------------------------------------------------------
consensus_8516#1 ------------------------------------------------------------
consensus_8516#0 AATAATTTCTCATCTAAAAGTAAAATTGCAAGTGGGGGTTGGGCTACTGTTTACAAGGCT 840
consensus_8516#2 ------------------------------------------------------------
consensus_8516#1 ------------------------------------------------------------
consensus_8516#0 CAAATGCGTAATAGTCTTGAGATTGCAATCAAAGTATATCCTATGGGCACGGGAGAAAAA 900
consensus_8516#2 ------------------------------------------------------------
consensus_8516#1 ------------------------------------------------------------
consensus_8516#0 CGTGTATTTTCCCAGTACGAAAGGGAGCTTAATTTACTTACGAAGCTTCAGCATACGAAT 960
consensus_8516#2 ------------------------------------------------------------
consensus_8516#1 ------------------------------------------------------------
consensus_8516#0 ATAATTAAACTTCTTGGACACTGCACTGGAGAATGGGAGCTGATTTTGATATATGAATAT 1020
consensus_8516#2 ------------------------------------------------------------
consensus_8516#1 ------------------------------------------------------------
consensus_8516#0 ATGCCCAATGGGAGCTTGGACAAATTTATACATGGCCCAAATAGAGAAGTATCGTTTGAC 1080
consensus_8516#2 ------------------------------------------------------------
consensus_8516#1 ------------------------------------------------------------
consensus_8516#0 TGGTTTTCGTGCTTCAAAATAATTCAAGGGATAGCAGAGGGTCTGCTCTATCTACACACG 1140
consensus_8516#2 ------------------------------------------------------------
consensus_8516#1 ------------------------------------------------------------
consensus_8516#0 TATGAAGCTGAGATATGCATTGTGCATAGGGATTTGAAACCGAGCAACATTCTGCTTGAT 1200
consensus_8516#2 ------------------------------------------------------------
consensus_8516#1 ------------------------------------------------------------
consensus_8516#0 TCAGATATGAATGCTAAGATAGGTGATTTTGGTATAGCTAAAACTATAAGCCCGGCACGG 1260
consensus_8516#2 ------------------------------------------------------------
consensus_8516#1 ------------------------------------------------------------
consensus_8516#0 CAGCAAGACACATATGTATCAGGCACATTTGGGTATATTGCTCCTGAATATCTTCGTGGA 1320
consensus_8516#2 ------------------------------------------------------------
consensus_8516#1 ------------------------------------------------------------
consensus_8516#0 GGTATTTTATCAACAAAGGTTGATGTATATG-CCTATGGTGTCATTCT--TCTAGAGATT 1377
consensus_8516#2 AGTATTT-ACCAACAAG---TGATGTATAT--CCTATGGTGTCATTCT--TCTAGAGATT 52
consensus_8516#1 GGTCCTT---GGAGAGA---TCATCAACATCACCCGCCGCCTCGACCTGATTTACGGCCT 54
** ** * * * ** * ** ** * ** ** * ** * *
consensus_8516#0 ATTACTGGCAGGAGGTCCTGTATTCCCT-GTCTAAAAGATGATGAGTATGTGCATTTAAC 1436
consensus_8516#2 ATTACTG-CAGGAG-TCCTGTAT---GA-GTCTAAAAGATGATGAG-------------- 92
consensus_8516#1 GCTGCTTCCTGCAGACTCTCAACCCCACCATATGCCAGAGGATGCGCCAGGTTCACCTGG 114
* ** * * ** ** * * * *** **** *
consensus_8516#0 TGAGTATGCCTGGGATCTATG--GAGAACCGGAAGATCAGCTGAGCTTCTAGATGCAGCA 1494
consensus_8516#2 --------CCTGGGATCTATG--GAGAACCGGAAGATCAGCTGAGCTTCTAGATGCA-CA 141
consensus_8516#1 CGACCAT-TTTGAAGCTGATGTTACGAATGTGGAGATCA-CTGCATCTGAGGAAATTCCG 172
** *** *** * ****** *** * ** *
consensus_8516#0 TTGCGCAATGAGGCTCGAATTGCTGAGATAACAAGCTGCATTCAGATAGCGT--TGTTGT 1552
consensus_8516#2 TTGC-CAATGAGGCTCGAATTGCTGAGATAACAAGCTGCATTCAGATAGCGT--TGTTGT 198
consensus_8516#1 TT---TGAAACCAATCAAACTA-TAACAGAGCCTTTTGAGTTCGGCGAACACCATGTAGC 228
** * ** ** * * * * * * ** *** * * * *** *
consensus_8516#0 GTGT--TCAGAAGGATCCGGCTGACCGGCCTTCCATGTTGGATGTGCTTGCGATGCTAAG 1610
consensus_8516#2 GTGT--TCAGAAGGATCCGGCTGACCGGCCTTCCATGTTGGATGTGCTTGCGATGCTAAG 256
consensus_8516#1 GAGACATCAGGAAGGTTTGGAAGAGCTGCTGTCCAAAGTGCAAAGGTTGAAATGGCTTTG 288
* * **** * * * ** ** * ** **** ** * * * *** *
consensus_8516#0 A-GATGAGAAGATTGTAGCTGCCCCTAAGAAACCAGGTGATCTTCTCCTTGGAGACGAAA 1669
consensus_8516#2 A-GATGAGAAGATTGTAGCTGCCCCTAAGAAACCAGGTGATCTTCTCCTTGGAGACGAAA 315
consensus_8516#1 CTGGTGGTCTCAGCATGATT--CTCTAGAGCGTCCATCAACTTATGACTTATTAAAGGCT 346
* ** * * * * *** * * * *** * *
consensus_8516#0 CGAGCGTAGAGTCAGGTGATCTTCTCCTTGGAGAGGAAACGAGTGGAGAG--ACTGCACA 1727
consensus_8516#2 CGAGCGTAGAGTCAGGTGATCTTCTCCTTGGAGAGGAAACGAGTGGAGAG--ACTGCACA 373
consensus_8516#1 GCTACAAATAATTTC-TCATCTAAAAGTAAAATTGCAAGTGGGGGGTGGGCTACTGTTTA 405
* * * * * **** * * * ** * * ** * * **** *
consensus_8516#0 TT-GGTTCGCAAGC--AGCGGCGCTAC--TTGCAGTTCTACTGAGTTCACGGTGCCCCGG 1782
consensus_8516#2 TT-GGTTCGCAAGC--AGCGGCGCTAC--TTGCAGTTCTACTGAGTTCACGGTGCCCCGG 428
consensus_8516#1 CAAGGCTCAAATGCGTAATAGTCTTGAGATTGCAATCAAAGTATATCCTATGGGCACGGG 465
** ** * ** * * * ***** * * * * * * ** * **
consensus_8516#0 TGAGAAGAG-ATTTTGTCATATTTGAAGCTGGTGGCTACTTAAGGTGCAAGTACGTTATG 1841
consensus_8516#2 TGAGAAGAG-ATTTTGTCATATTTGAAGCTGGTGGCTACTTAAGGTGCAAGTACGTTATG 487
consensus_8516#1 AGAAAAACGTGTATTTTCCCAGTACGAAAGGGAGCTTAATTTACTTACGAAGCTTCAACA 525
** ** * * ** ** * * * ** * ** ** * * * * *
consensus_8516#0 TATAAAGCTATTACCTTTGATTATTCACAGCGTTGCAA---GCAAAATAAGCATGGTGAA 1898
consensus_8516#2 TATAAAGCTATTACCTTTGATTATTCACAGCGTTGCAA---GCAAA-TAAGCCTGGTGAA 543
consensus_8516#1 TACGAATATAATTAAACTTCTTGGACACTGCACTGGAGAATGGGAGCTGATTCTGATATA 585
** ** ** * * ** *** ** ** * * * * * ** * *
consensus_8516#0 TG--TGTATTTCAGATTCTGAGTAATTATGGATTTACCATATGTGATGGAAATAAATTAA 1956
consensus_8516#2 TG--TGTATTTCAAAAAA------------------------------------------ 559
consensus_8516#1 TGAATATATGCCCAATGGGAGCTTGGACAAA----------------------------- 616
** * *** * *
consensus_8516#0 ACATACAGAAGGTGGAATGTATAGTATATCATAAATATTTTAGACAAAATTGGCTACAAG 2016
consensus_8516#2 ------------------------------------------------------------
consensus_8516#1 ------------------------------------------------------------
consensus_8516#0 CAATATAATTCTGTGGCATTTGCTTATGGGCGAAAGTAAAAAACC 2061
consensus_8516#2 ---------------------------------------------
consensus_8516#1 ---------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||