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Oryza sativa
cluster # 8606 cluster # 8606       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8606#0 length = 988 sequences # 5  

consensusID : consensus_8606#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 988
fasta sequence
                              [ATTTCTTCCTCCAACTCAAATAACCCAATAATACATATAGTCCCCAGCCCAGCCTGCTCCATCCGAAGGCCCAACCCCGCTCGCGCCAGATCCCCCCAAACCCAATCGATCCCCATCGATCACCGCGCTCCCCCCGGCGCCGCCGCGGCGAG-AGGTAGGGTTTGCTCGACGACGCGAGGGGGAGCGACCACCGCCCGCGACCCGATAGGAGGGATGGCGGCGGCCGAGGGCGAGAAGAAGATGACCAGTTTTATCGCGAAGAGCTCCGGCGCCGAGGAGTTCGAGGCGGGGGCCATCCGCCGCGCGATCNAGGACGACTGCAACGACGACGACAGC-GGCATCCTGCCCCCCGACGTCCTCTCCGGCGAGGGCCTCGATAACCGCGACGCCGGCTTCCCGCCTTCACAAAGAAGCGCCT-CCAAGATCACGGGAGATCGCGCGGCGGTGAACCCGGCAG-CCGCTGAT-CCACCAATGCCCGTTCCAGGGTTGCACCATCATCCTAACATCCCCGCTGCAAACCGCCAGCT-CCCTCCTGCCGCTAGACTACTGATCAACTGTGGCATCTTCCTCGTCGCCACTGCCGGGTCCTCCATAGTTTT-CCACACTGCTGGAGACCCTTCCGCCATCGACGGTCCTGCATATGCCCTTGTTGCATTCTTCTTCGTCCTCCTCGGCTTGTGGTTTGTGCTGCTTGGACCCGTCGCCGGCCAGTTCCCTGGAGCCACGAGGGTCGCCGTTGCCATTGCGAAAGCGCTCAAGGGTTACCTGCTCGGCGGCGGCAATTGATCAAATATTTGATTCATTCTTTATATAGGTATAGCTTTGCTAGCTCACAGTAGTTTTCTGTTTGTTTGTATGTCGTGTCTATAGGCGTTGTAGCCCATAAACTCACTGTAAAGTGTGAAGTGTATATACGTGTTCTTGTAAGGCCCTGTTTCTTTCAGCTTAGGATTATTATAATCTAGATTATTGAGTTAGATTAAAAAAA]

[+] EMBL AK060974             [ATTTCTTCCTCCAACTCAAATAACCCAATAATACATATAGTCCCCAGCCCAGCCTGCTCCATCCGAAGGCCCAACCCCGCTCGCGCCAGATCCCCCCAAACCCAATCGATCCCCATCGATCACCGCGCTCCCCCCGGCGCCGCCGCGGCGAG AGGTAGGGTTTGCTCGACGACGCGAGGGGGAGCGACCACCGCCCGCGACCCGATAGGAGGGATGGCGGCGGCCGAGGGCGAGAAGAAGATGACCAGTTTTATCGCGAAGAGCTCCGGCGCCGAGGAGTTCGAGGCGGGGGCCATCCGCCGCGCGATCGAGGACGACTGCGACGACGACGACAGC GGCATCCTGCCCCCCGACGTCCTCTCCGGCGAGGGCCTCGATAACCGCGACGCCGGCTTCCCGCCTTCACAAAGAAGCGCCT CCAAGATCACGGGAGATCGCGCGGCGGTGAACCCGGCAG CCGCTGAT CCACCAATGCCCGTTCCAGGGTTGCACCATCATCCTAACATCCCCGCTGCAAACCGCCAGCT CCCTCCTGCCGCTAGACTACTGATCAACTGTGGCATCTTCCTCGTCGCCACTGCCGGGTCCTCCATAGTTTT CCACACTGCTGGAGACCCTTCCGCCATCGACGGTCCTGCATATGCCCTTGTTGCATTCTTCTTCGTCCTCCTCGGCTTGTGGTTTGTGCTGCTTGGACCCGTCGCCGGCCAGTTCCCTGGAGCCACGAGGGTCGCCGTTGCCATTGCGAAAGCGCTCAAGGGTTACCTGCTCGGCGGCGGCAATTGATCAAATATTTGATTCATTCTTTATATAGGTATAGCTTTGCTAGCTCACAGTAGTTTTCTGTTTGTTTGTATGTCGTGTCTATAGGCGTTGTAGCCCATAAACTCACTGTAAAGTGTGAAGTGTATATACGTGTTCTTGTAAGGCCC                                                        ]
[+] EMBL AU062797             [                                                                                  GCGCCAGATCCCCCCAAACCCAATCGATCCCCATCGATCACCGGGNTCCCCCCGGCGCCG CNCGGCGAG AGGTAGGGTTTGCTCGACGACGCGAGGGGGAGCGACCACCGCCCGCAACCCGATAGGAGGGATGGCGGCGGCCGAGGGCGAGAAGAAGATGACCAGTTTTATCGCGAAGAGCTCCGGCGCCGAGGAGTTCGAGGCGGGGGCCATCCGCCGCGCGATCNAGGACGACTGCAACGACGACGACAGCGGGCATCCTGNCCCCCGACGTCCTCTCCGGCGAGGGCCTCGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU062810             [                                                                                  GCGCCAGATCCCCCCAAACCCAATCGATCCCCATCGATCACCNNGCTCCCCCCGGCGCCGCCGCGGCGAGTAGGTAGGGTTTGCTCGACGACGCGAGGGGGAGCGACCACCGNCCGCAACCCGATAGGAGGGATGGCGGCGGTCGAGGGCGAGAAGAAGATGACCAGTTTTATCGCGAAGNGCTCCGGCGCCGAGGAGTTCGAGGCGGGGGCCATNCGTCGNGTGATCNAGGACGACTGCAACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL D42911               [                                                                                    GCCAGATCCCCCCAAACCCAATCGATCCCCATCGATCACCGCGCTCCCCCCGGCGCCGCCGCGGCGAG AGGTAGGGTTTGCTCGACGACGCGAGGGGGAGCGACCACCGTCCGCGACCCGATAGGAGGGATGGCGACGGCCGAGGNCGNGNAGAAGATGACCAGTTTTATCGCGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU081249             [                                                                                                                                                                                                                                                                                                                                                                                                                            anGCGCCTCCCAAGATCACGGGAGATCGCNCGGCGGTGAACCCGGCAGCCCGCTGATCCCACCAATGCCCGTTCCAGGGTTGCACCATCATCCTAACATCCCCGNTGCAAACCGCCAGNTCCCCTCCTNCCGCTAGACTACTGATCAACTGTGGCATCTTCCTCGTCGCCACTGCCGGGTCCTCCATAGTTTTCCCACACTGCTGGAGACCCTTCCGCCATCGACGGTCCTGCATATGCCCTTGTTGCATTCTTCTTCGTCCTCCTCGGCTTGTGGTTTGTGCTGCTTGGACCCGTCGCCGGCCAGTTCCCTGGAGCCACGAGGGTCGCCGTTGCCATTGCGAAAGCGCTCAAGGGTTACCTGCTCGGCGGCGGCAATTGATCAAATATTTGATTCATTCTTTATATAGGTATAGCTTTGCTAGCTCACAGTAGTTTTCTGTTTGTTTGTATGTCGTGTCTATAGGCGTTGTAGCCCATAAACTCACTGTAAAGTGTGAAGTGTATATACGTGTTCTTGTAAGGCCCTGTTTCTTTCAGCTTAGGATTATTATAATCTAGATTATTGAGTTAGATTAAAAAAA]


>consensus_8606#0 ATTTCTTCCTCCAACTCAAATAACCCAATAATACATATAGTCCCCAGCCCAGCCTGCTCC ATCCGAAGGCCCAACCCCGCTCGCGCCAGATCCCCCCAAACCCAATCGATCCCCATCGAT CACCGCGCTCCCCCCGGCGCCGCCGCGGCGAGAGGTAGGGTTTGCTCGACGACGCGAGGG GGAGCGACCACCGCCCGCGACCCGATAGGAGGGATGGCGGCGGCCGAGGGCGAGAAGAAG ATGACCAGTTTTATCGCGAAGAGCTCCGGCGCCGAGGAGTTCGAGGCGGGGGCCATCCGC CGCGCGATCNAGGACGACTGCAACGACGACGACAGCGGCATCCTGCCCCCCGACGTCCTC TCCGGCGAGGGCCTCGATAACCGCGACGCCGGCTTCCCGCCTTCACAAAGAAGCGCCTCC AAGATCACGGGAGATCGCGCGGCGGTGAACCCGGCAGCCGCTGATCCACCAATGCCCGTT CCAGGGTTGCACCATCATCCTAACATCCCCGCTGCAAACCGCCAGCTCCCTCCTGCCGCT AGACTACTGATCAACTGTGGCATCTTCCTCGTCGCCACTGCCGGGTCCTCCATAGTTTTC CACACTGCTGGAGACCCTTCCGCCATCGACGGTCCTGCATATGCCCTTGTTGCATTCTTC TTCGTCCTCCTCGGCTTGTGGTTTGTGCTGCTTGGACCCGTCGCCGGCCAGTTCCCTGGA GCCACGAGGGTCGCCGTTGCCATTGCGAAAGCGCTCAAGGGTTACCTGCTCGGCGGCGGC AATTGATCAAATATTTGATTCATTCTTTATATAGGTATAGCTTTGCTAGCTCACAGTAGT TTTCTGTTTGTTTGTATGTCGTGTCTATAGGCGTTGTAGCCCATAAACTCACTGTAAAGT GTGAAGTGTATATACGTGTTCTTGTAAGGCCCTGTTTCTTTCAGCTTAGGATTATTATAA TCTAGATTATTGAGTTAGATTAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)