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Oryza sativa
cluster # 8613 cluster # 8613       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8613#0 length = 3118 sequences # 4  
consensus_8613#1 length = 220 sequences # 1  

consensusID : consensus_8613#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 3118
fasta sequence
                              [GAACACAATGACTCACCAACTCGAGGAAAACTACACTGTACTTTTTTTTTCTTTTTCTTTTTTCTGTTCTTCAGGCAACAAACTGGCTGTGATTTCATGGTGCAGGACAGCTGCAGGGGAGAGGGAGAGGAGGGTGTTTTCTTCTCCCTGAGAGCCGGAGGCAATGGCCAAGGTGCCTGATCTCGGCTCCGACTTCGCCCAGAAGCTGCTGCTCGACCTCCGGCGCCGCCGCGAGAGGCTCGGCTTCGACTCGCCGGCGCCGCCGCAGCGCACGTCGTCGTCCAACGCCGCCGTTCTTCCTCGAGATTCTCATTCGAGTTCTCAGAGGCCACATCGAAGCCAGAAGCCACAACAAGCAGCTCCTCGAGCAGGAAGAGCAGAAGCAACAGCAAACAGATCACACCCACAGAGCGGCAATGCCATTGCCGGAGCCGGCAAGCCGCGCCACCGCGCCACGCCGGTCGCCAATTCGCACCAAATCGTGCCATTCCAAGGAGGAGGCAGCGCCAAGCAGAAGCCCGCGAACAGCAGCATCGACGTGCAGATGGCGCTGGCAATCGCTCTCAGCAACAGAGGCAAGCTCCAGAACATCGAGCTCGTGTCGCGCAACGGCTCCATCTTCTTCAGGGACACGGATCACGCCATGCCGGAGAGCCACCTCGTGTCGCCCAGCGCGCACGTCGGCAAGGTGGCGATCGGCGTCAAGAAGCTCAATGACATCCTCATGGTGTACTCATCGGGCGGCGGCGCGAGGGACACGGGCAGGAGGAGCTCGGTTGACATTGGGAGGGAGCTCTTCGGAGGAGCCATGGATTTGGAGGAGTCACTAAGCATGCTTGTGATGCTTCAGGAGGCATCAGATTACATGGAAGGATCCGGGAATGGCAAGGTGTTGCTACTGGAGGGCAAGGAGAACTTGAAGAACTCGGCGCGTTCGCCGAGTTCCGCAAGGCTGGTGGAGATTGTTGATGAGGATTCAGAGGCCGAGCAAGCCAAGAACTCGAAGAGTCTGTCAATGCAGATAGTTCCTCACAAGAATTCACAAGGTTTCAGTACTCCAAACAGCTCATCAGTCTTGCAGGTCTCTACTGTTACAGGCAACAATTCCAGGAGCAATTCTTCTAAAGCTGACAAGGATGATGCAAAAGTCAGGATGCCTAATGTGATTGCCAAGCTGATGGGATTGGACAATCTTCCATCAACCAAGGTAGCAAACAAGGGCATGGAGAAGTTTGTGAAACCTGAAGCATTGTCAAGAAAGGATAGGAGGACGAATTTGGTCGGCGGCAGATTGCCGATTCAGATTATAGGTTCAGAAAGGGTGTCATCCAAAGGACACAACATGAATTTGCTGCCAGGTGAGTGGAAGATTGGCCTGAAAAATTATGAAGTATACAAAAGTGCTAATTTGCAGGTGTCTAATAGTTCATCGATTCCTGCGGCTGATAAGCAAACAAGGCAAACCATGAGACAAATGTTAAGCAAAATGGAGAATGCAGAGAGAAGAGGTAGTCTAGGACAACAACTCCATGAGGAGAAGAAACTGACTGAAGAAACTAATCAGCAGAAGGTTGCGAATGTTGGATGCCGCACCGATGCAGGGAAAAAGATGGATTTTCTGAAAAGAATTAGGAAAATTTCAGGCAGCAGACAAGTCACTGAAGAGAAGCACATTATTCAAGAAGAGAGCACAACAGGGAAGAAGCAAACTACAAGCATGAAACAATTGCTGGGCACAGACAGTGAGGATAAATCTAAGATAACTAGAGTTAAGTTTAACAAGGAAAACCTTGCCACTACT-GAAATCAAGAATGCAGCAAGAGGGAAGAACGGCAAAACAGATCAACGGAAGCGGCAATCATACAATAAACAGACAGATGTACATAGCATGCCAAAGAAATCTCAGAAATATCGTGAAATGAAGAGTAAAGAAGGCATTCAGAACTTAGAGCACAAGAGGTCAACAAAGTCAGAAGCGACACAATTGAAAATTCTCCCATATACTGCAGAGATACAGCAAGAGAATGGAAAGCATGAAGAAGATAATGATATTGTCAAGCCATCAGATAGCCATGGGGATGGAGGTATTTCTGAGCAATTTGCAGGAATGGTGGAAGACAGCAGAACAACTGGAATGGCTTCCCCAGACCAATTTATGAAGCAAATAACTGAAGTGACCTCAATTGATGTGCATGCAAGTGATAGATCAAATGTGGTAGATCAGAGTGTAACTCAAACAAATGATGACACAGGTTCTAATACAGCTAGTGAAGCTACACAAACACCAGAGACATTCACAGAGGGGGAACATCACCAAAATCTGCAATTAGTGGAGTTTAAAGAGAAACCGTTGGATGATTTGGGTGATGCCAAAGAGACCAGCAATCCAACGGATTTGCAAGACCAAAAGATGCATGTGGTCTCGTGTGATTCATTCACAGAGAATCAGCTACTGCTTATGAGAATGTTGCTAAAGGATCAATACTTGCTTGAAACTGCAAAGGCTCTTGTCAGAAATCCTGTCCCTGTACATTTTGTCAATGCCAGTGCAGATAGATGGTCAGAGAAAGGCAGCTCTCTTTTTTCAGATATAGCGCGGGAAGTTATCAGAAAGAAAGGTAAAAGAACTGAGGCAATTGTAGAAGTTAGCATGGCAAACACAACTAACATGAAATTGCAATACTTGGATGATCTTATCATGGAACTGGATGGAGATATTGAGAGCCTGAACATCTCCAAGAAATCTC-AACATCTGGGTGAAGATTGCACAGCTGAAAATTTGCGAATGATACTTCACAGGGACATGCAAAACAATCATCCGGATGCTAACTCGATGTGGGATTTCGGTTGGAACCGCATTTCTGACCTTCCGATTGAGAGAAATGAAGTCGTCAGGGATTTGGAGAAGAACATATTGGGTGGCATGATCACAGATGTAGCAAGGGAGCTAATTGAATTATCAGTACGCCATGGGTGCTGTGCCTGTGAGGCCTGAGTGAGTGTCAGACTGACTTTGAAACGTGATACAAGAGTTGATTTCTGAAAGTGATTGATCTTAGGTTAGATTTGTATATTTAC--CAAGGTTTTCCAGTAAATATATACATGTATTTTTCAAAAA]

[+] EMBL AK067093             [GAACACAATGACTCACCAACTCGAGGAAAACTACACTGTACTTTTTTTTTCTTTTTCTTTTTTCTGTTCTTCAGGCAACAAACTGGCTGTGATTTCATGGTGCAGGACAGCTGCAGGGGAGAGGGAGAGGAGGGTGTTTTCTTCTCCCTGAGAGCCGGAGGCAATGGCCAAGGTGCCTGATCTCGGCTCCGACTTCGCCCAGAAGCTGCTGCTCGACCTCCGGCGCCGCCGCGAGAGGCTCGGCTTCGACTCGCCGGCGCCGCCGCAGCGCACGTCGTCGTCCAACGCCGCCGTTCTTCCTCGAGATTCTCATTCGAGTTCTCAGAGGCCACATCGAAGCCAGAAGCCACAACAAGCAGCTCCTCGAGCAGGAAGAGCAGAAGCAACAGCAAACAGATCACACCCACAGAGCGGCAATGCCATTGCCGGAGCCGGCAAGCCGCGCCACCGCGCCACGCCGGTCGCCAATTCGCACCAAATCGTGCCATTCCAAGGAGGAGGCAGCGCCAAGCAGAAGCCCGCGAACAGCAGCATCGACGTGCAGATGGCGCTGGCAATCGCTCTCAGCAACAGAGGCAAGCTCCAGAACATCGAGCTCGTGTCGCGCAACGGCTCCATCTTCTTCAGGGACACGGATCACGCCATGCCGGAGAGCCACCTCGTGTCGCCCAGCGCGCACGTCGGCAAGGTGGCGATCGGCGTCAAGAAGCTCAATGACATCCTCATGGTGTACTCATCGGGCGGCGGCGCGAGGGACACGGGCAGGAGGAGCTCGGTTGACATTGGGAGGGAGCTCTTCGGAGGAGCCATGGATTTGGAGGAGTCACTAAGCATGCTTGTGATGCTTCAGGAGGCATCAGATTACATGGAAGGATCCGGGAATGGCAAGGTGTTGCTACTGGAGGGCAAGGAGAACTTGAAGAACTCGGCGCGTTCGCCGAGTTCCGCAAGGCTGGTGGAGATTGTTGATGAGGATTCAGAGGCCGAGCAAGCCAAGAACTCGAAGAGTCTGTCAATGCAGATAGTTCCTCACAAGAATTCACAAGGTTTCAGTACTCCAAACAGCTCATCAGTCTTGCAGGTCTCTACTGTTACAGGCAACAATTCCAGGAGCAATTCTTCTAAAGCTGACAAGGATGATGCAAAAGTCAGGATGCCTAATGTGATTGCCAAGCTGATGGGATTGGACAATCTTCCATCAACCAAGGTAGCAAACAAGGGCATGGAGAAGTTTGTGAAACCTGAAGCATTGTCAAGAAAGGATAGGAGGACGAATTTGGTCGGCGGCAGATTGCCGATTCAGATTATAGGTTCAGAAAGGGTGTCATCCAAAGGACACAACATGAATTTGCTGCCAGGTGAGTGGAAGATTGGCCTGAAAAATTATGAAGTATACAAAAGTGCTAATTTGCAGGTGTCTAATAGTTCATCGATTCCTGCGGCTGATAAGCAAACAAGGCAAACCATGAGACAAATGTTAAGCAAAATGGAGAATGCAGAGAGAAGAGGTAGTCTAGGACAACAACTCCATGAGGAGAAGAAACTGACTGAAGAAACTAATCAGCAGAAGGTTGCGAATGTTGGATGCCGCACCGATGCAGGGAAAAAGATGGATTTTCTGAAAAGAATTAGGAAAATTTCAGGCAGCAGACAAGTCACTGAAGAGAAGCACATTATTCAAGAAGAGAGCACAACAGGGAAGAAGCAAACTACAAGCATGAAACAATTGCTGGGCACAGACAGTGAGGATAAATCTAAGATAACTAGAGTTAAGTTTAACAAGGAAAACCTTGCCACTACT GAAATCAAGAATGCAGCAAGAGGGAAGAACGGCAAAACAGATCAACGGAAGCGGCAATCATACAATAAACAGACAGATGTACATAGCATGCCAAAGAAATCTCAGAAATATCGTGAAATGAAGAGTAAAGAAGGCATTCAGAACTTAGAGCACAAGAGGTCAACAAAGTCAGAAGCGACACAATTGAAAATTCTCCCATATACTGCAGAGATACAGCAAGAGAATGGAAAGCATGAAGAAGATAATGATATTGTCAAGCCATCAGATAGCCATGGGGATGGAGGTATTTCTGAGCAATTTGCAGGAATGGTGGAAGACAGCAGAACAACTGGAATGGCTTCCCCAGACCAATTTATGAAGCAAATAACTGAAGTGACCTCAATTGATGTGCATGCAAGTGATAGATCAAATGTGGTAGATCAGAGTGTAACTCAAACAAATGATGACACAGGTTCTAATACAGCTAGTGAAGCTACACAAACACCAGAGACATTCACAGAGGGGGAACATCACCAAAATCTGCAATTAGTGGAGTTTAAAGAGAAACCGTTGGATGATTTGGGTGATGCCAAAGAGACCAGCAATCCAACGGATTTGCAAGACCAAAAGATGCATGTGGTCTCGTGTGATTCATTCACAGAGAATCAGCTACTGCTTATGAGAATGTTGCTAAAGGATCAATACTTGCTTGAAACTGCAAAGGCTCTTGTCAGAAATCCTGTCCCTGTACATTTTGTCAATGCCAGTGCAGATAGATGGTCAGAGAAAGGCAGCTCTCTTTTTTCAGATATAGCGCGGGAAGTTATCAGAAAGAAAGGTAAAAGAACTGAGGCAATTGTAGAAGTTAGCATGGCAAACACAACTAACATGAAATTGCAATACTTGGATGATCTTATCATGGAACTGGATGGAGATATTGAGAGCCTGAACATCTCCAAGAAATCTC AACATCTGGGTGAAGATTGCACAGCTGAAAATTTGCGAATGATACTTCACAGGGACATGCAAAACAATCATCCGGATGCTAACTCGATGTGGGATTTCGGTTGGAACCGCATTTCTGACCTTCCGATTGAGAGAAATGAAGTCGTCAGGGATTTGGAGAAGAACATATTGGGTGGCATGATCACAGATGTAGCAAGGGAGCTAATTGAATTATCAGTACGCCATGGGTGCTGTGCCTGTGAGGCCTGAGTGAGTGTCAGACTGACTTTGAAACGTGATACAAGAGTTGATTTCTGAAAGTGATTGATCTTAGGTTAGATTTGTATATTTAC  CAAGGTTTTCCAGTAAATATATACAT              ]
[+] EMBL CB633403             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ACAAGGTTTCAGTACTCCAAACAGCTCATCAGTCTTGCAGGTCTCTACTGTTACAGGCAACAATTCCAGGAGCAATGCTTCTAAAGCTGACAAGGATGATGCAAAAGTCAGGATGCCTAATGTGATTGCCAAGCTGATGGGATTAGACAATCTTCCATCAACCAAGGTAGCAAACAAGGGCATGGAGAAGTTTGTGAAACCTGAAGCATTGTCAAGAAAGGATAGGAGGACGAATTTGGTCGGCGGCAGATTGCCGATTCAGATTATAGGTTCAGAAAGGGTGTCATCCAAAGGACACAACATGAATTTGCTGCCAGGTGAGTGGAAGATTGGCCTGAAAAATTATGAAGTATACAAAAGTGCTAATTTGCAGGTGTCTAATAGTTCATCGATTCCTGCGGCTGATAAGCAAACAAGGCAAACCATGAGACAAATGTTAAGCAAAATGGAGAATGCAGAGAGAAGAGGTAGTCTAGGACAACAACTCCATGAGGAGAAGAAACTGACTGAAGAAACTAATCAGCAGAAGGTTGCGAATGTTGGATGCCGCACCGATGCAGGGAAAAAGATGGATTTTCTGAAAAGAATTAGGAAAATTTCAGGCAGCAGACAAGTCACTGAAGAGAAGCACATTATTCAAGAAGAGAGCACAACAGGGAAGAAGCAAACTACAAGCATGAAACAATTGCTGGGCACAGACAGTGAGGATAAATCTAAGATAACTAGAGTTAAGTTTAACAAGGAAAACCTTGCCACTACTNGAAATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CB633404             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GAGTTTAAAGAGAAACCGTTGGATGATTTGGGTGATGCCAAAGAGACCAGCAATCCAACGGATTTGCAAGACCAAAAGATGCATGTGGTCTCGTGTGATTCATTCACAGAGAATCAGCTACTGCTTATGAGAATGTTGCTAAAGGATCAATACTTGCTTGAAACTGCAAAGGCTCTTGTCAGAAATCCTGTCCCTGTACATTTTGTCAATGCCAGTGCAGATAGATGGTCAGAGAAAGGCAGCTCTCTTTTTTCAGATATAGCGCGGGAAGTTATCAGAAAGAAAGGTAAAAGAACTGAGGCAATTGTAGAAGTTAGCATGGCAAACACAACTAACATGAAATTGCAATACTTGGATGATCTTATCATGGAACTGGATGGAGATATTGAGAGCCTGAACATCTCCAAGAAATCTC AACATCTGGGTGAAGATTGCACAGCTGAAAATTTGCGAATGATACTTCACAGGGACATGCAAAACAATCATCCGGATGCTAACTCGATGTGGGATTTCGGTTGGAACCGCATTTCTGACCTTCCGATTGAGAGAAATGAAGTCGTCAGGGATTTGGAGAAGAACATATTGGGTGGCATGATCACAGATGTAGCAAGGGAGCTAATTGAATTATCAGTACGCCATGGGTGCTGTGCCTGTGAGGCCTGAGTGAGTGTCAGTCTGGGTGTGAAACGTGATACAAGAGTTGATTTCTGAAAGTGATTGATCTTAGGTTAGATTTGTATATTTCCCTCAAG  ATTCCAGTAAATATATACATGTA           ]
[+] EMBL BI807255             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAAGCTCTT TCA AAANCCNGTCCCTG ACA TTTGTCAAT CCA TCCA ATAGAT GTCAGAGAAAGCCACCTCTCTTTTTTCAGATATAGC CGGGAAGTTATCAGAAAGAAA GTAAAAGAACTGAGCCAATTGTAGAAGTTAGCATGGCAAACACAACTAACATGAAATTGCAATACTTGGATGATCTTATCATGGAACTGGATGGAGATATTGAGAGCCTGAACATCTCCAAGAAATCTCAAACATCTGGGTGAAGATTGCACAGCTGAAAATTTGCGAATGATACTTCACAGGGACATGC AAAC ATCATCCGGATGCTAACTCGATGTGGGATTTCGGTTGGAACCGCATTTCTGACCTTCCGATTGAGAGAAATGAAGTCGTCAGGGATTTGGAGAAGAACATATTGGGTGGCATGATCACAGATGTAGCAAGGGAGCTAATTGAATTATCAGTACGCCATGGGTGCTGTGCCTGTGAGGCCTGAGTGAGTGTCAGACTGACTTTGAAACGTGATACAAGAGTTGATTTCTGAAAGTGATTGATCTTAGGTTAGATTTGTATATTTAC  CAAGGTTTTCC GTAAATATATACATATATTTTTCAAAAA]


>consensus_8613#0 GAACACAATGACTCACCAACTCGAGGAAAACTACACTGTACTTTTTTTTTCTTTTTCTTT TTTCTGTTCTTCAGGCAACAAACTGGCTGTGATTTCATGGTGCAGGACAGCTGCAGGGGA GAGGGAGAGGAGGGTGTTTTCTTCTCCCTGAGAGCCGGAGGCAATGGCCAAGGTGCCTGA TCTCGGCTCCGACTTCGCCCAGAAGCTGCTGCTCGACCTCCGGCGCCGCCGCGAGAGGCT CGGCTTCGACTCGCCGGCGCCGCCGCAGCGCACGTCGTCGTCCAACGCCGCCGTTCTTCC TCGAGATTCTCATTCGAGTTCTCAGAGGCCACATCGAAGCCAGAAGCCACAACAAGCAGC TCCTCGAGCAGGAAGAGCAGAAGCAACAGCAAACAGATCACACCCACAGAGCGGCAATGC CATTGCCGGAGCCGGCAAGCCGCGCCACCGCGCCACGCCGGTCGCCAATTCGCACCAAAT CGTGCCATTCCAAGGAGGAGGCAGCGCCAAGCAGAAGCCCGCGAACAGCAGCATCGACGT GCAGATGGCGCTGGCAATCGCTCTCAGCAACAGAGGCAAGCTCCAGAACATCGAGCTCGT GTCGCGCAACGGCTCCATCTTCTTCAGGGACACGGATCACGCCATGCCGGAGAGCCACCT CGTGTCGCCCAGCGCGCACGTCGGCAAGGTGGCGATCGGCGTCAAGAAGCTCAATGACAT CCTCATGGTGTACTCATCGGGCGGCGGCGCGAGGGACACGGGCAGGAGGAGCTCGGTTGA CATTGGGAGGGAGCTCTTCGGAGGAGCCATGGATTTGGAGGAGTCACTAAGCATGCTTGT GATGCTTCAGGAGGCATCAGATTACATGGAAGGATCCGGGAATGGCAAGGTGTTGCTACT GGAGGGCAAGGAGAACTTGAAGAACTCGGCGCGTTCGCCGAGTTCCGCAAGGCTGGTGGA GATTGTTGATGAGGATTCAGAGGCCGAGCAAGCCAAGAACTCGAAGAGTCTGTCAATGCA GATAGTTCCTCACAAGAATTCACAAGGTTTCAGTACTCCAAACAGCTCATCAGTCTTGCA GGTCTCTACTGTTACAGGCAACAATTCCAGGAGCAATTCTTCTAAAGCTGACAAGGATGA TGCAAAAGTCAGGATGCCTAATGTGATTGCCAAGCTGATGGGATTGGACAATCTTCCATC AACCAAGGTAGCAAACAAGGGCATGGAGAAGTTTGTGAAACCTGAAGCATTGTCAAGAAA GGATAGGAGGACGAATTTGGTCGGCGGCAGATTGCCGATTCAGATTATAGGTTCAGAAAG GGTGTCATCCAAAGGACACAACATGAATTTGCTGCCAGGTGAGTGGAAGATTGGCCTGAA AAATTATGAAGTATACAAAAGTGCTAATTTGCAGGTGTCTAATAGTTCATCGATTCCTGC GGCTGATAAGCAAACAAGGCAAACCATGAGACAAATGTTAAGCAAAATGGAGAATGCAGA GAGAAGAGGTAGTCTAGGACAACAACTCCATGAGGAGAAGAAACTGACTGAAGAAACTAA TCAGCAGAAGGTTGCGAATGTTGGATGCCGCACCGATGCAGGGAAAAAGATGGATTTTCT GAAAAGAATTAGGAAAATTTCAGGCAGCAGACAAGTCACTGAAGAGAAGCACATTATTCA AGAAGAGAGCACAACAGGGAAGAAGCAAACTACAAGCATGAAACAATTGCTGGGCACAGA CAGTGAGGATAAATCTAAGATAACTAGAGTTAAGTTTAACAAGGAAAACCTTGCCACTAC TGAAATCAAGAATGCAGCAAGAGGGAAGAACGGCAAAACAGATCAACGGAAGCGGCAATC ATACAATAAACAGACAGATGTACATAGCATGCCAAAGAAATCTCAGAAATATCGTGAAAT GAAGAGTAAAGAAGGCATTCAGAACTTAGAGCACAAGAGGTCAACAAAGTCAGAAGCGAC ACAATTGAAAATTCTCCCATATACTGCAGAGATACAGCAAGAGAATGGAAAGCATGAAGA AGATAATGATATTGTCAAGCCATCAGATAGCCATGGGGATGGAGGTATTTCTGAGCAATT TGCAGGAATGGTGGAAGACAGCAGAACAACTGGAATGGCTTCCCCAGACCAATTTATGAA GCAAATAACTGAAGTGACCTCAATTGATGTGCATGCAAGTGATAGATCAAATGTGGTAGA TCAGAGTGTAACTCAAACAAATGATGACACAGGTTCTAATACAGCTAGTGAAGCTACACA AACACCAGAGACATTCACAGAGGGGGAACATCACCAAAATCTGCAATTAGTGGAGTTTAA AGAGAAACCGTTGGATGATTTGGGTGATGCCAAAGAGACCAGCAATCCAACGGATTTGCA AGACCAAAAGATGCATGTGGTCTCGTGTGATTCATTCACAGAGAATCAGCTACTGCTTAT GAGAATGTTGCTAAAGGATCAATACTTGCTTGAAACTGCAAAGGCTCTTGTCAGAAATCC TGTCCCTGTACATTTTGTCAATGCCAGTGCAGATAGATGGTCAGAGAAAGGCAGCTCTCT TTTTTCAGATATAGCGCGGGAAGTTATCAGAAAGAAAGGTAAAAGAACTGAGGCAATTGT AGAAGTTAGCATGGCAAACACAACTAACATGAAATTGCAATACTTGGATGATCTTATCAT GGAACTGGATGGAGATATTGAGAGCCTGAACATCTCCAAGAAATCTCAACATCTGGGTGA AGATTGCACAGCTGAAAATTTGCGAATGATACTTCACAGGGACATGCAAAACAATCATCC GGATGCTAACTCGATGTGGGATTTCGGTTGGAACCGCATTTCTGACCTTCCGATTGAGAG AAATGAAGTCGTCAGGGATTTGGAGAAGAACATATTGGGTGGCATGATCACAGATGTAGC AAGGGAGCTAATTGAATTATCAGTACGCCATGGGTGCTGTGCCTGTGAGGCCTGAGTGAG TGTCAGACTGACTTTGAAACGTGATACAAGAGTTGATTTCTGAAAGTGATTGATCTTAGG TTAGATTTGTATATTTACCAAGGTTTTCCAGTAAATATATACATGTATTTTTCAAAAA



consensusID : consensus_8613#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 220
fasta sequence
                              [CGGNACGAGCGGCACGAGGNGGGGGGCCCAGTNAGGCCTGANTGAGTGTCAGACTGACTTTGAAACGTGATACAAGAGTTGATTTCTGAAAGTGATTGATCTTAGGTTAGATTTGTATATTTACCAAGGTTTTCCAGTAAATATATACATGTATTTTTGCAAGATTTCTGTACATAGANGAATTTGTACGTGCGTTGANCANCAGCATTCTCTGCCTGTC]

[+] EMBL AA751607             [CGGNACGAGCGGCACGAGGNGGGGGGCCCAGTNAGGCCTGANTGAGTGTCAGACTGACTTTGAAACGTGATACAAGAGTTGATTTCTGAAAGTGATTGATCTTAGGTTAGATTTGTATATTTACCAAGGTTTTCCAGTAAATATATACATGTATTTTTGCAAGATTTCTGTACATAGANGAATTTGTACGTGCGTTGANCANCAGCATTCTCTGCCTGTC]


>consensus_8613#1 CGGNACGAGCGGCACGAGGNGGGGGGCCCAGTNAGGCCTGANTGAGTGTCAGACTGACTT TGAAACGTGATACAAGAGTTGATTTCTGAAAGTGATTGATCTTAGGTTAGATTTGTATAT TTACCAAGGTTTTCCAGTAAATATATACATGTATTTTTGCAAGATTTCTGTACATAGANG AATTTGTACGTGCGTTGANCANCAGCATTCTCTGCCTGTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8613#0      GAACACAATGACTCACCAACTCGAGGAAAACTACACTGTACTTTTTTTTTCTTTTTCTTT 60
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      TTTCTGTTCTTCAGGCAACAAACTGGCTGTGATTTCATGGTGCAGGACAGCTGCAGGGGA 120
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      GAGGGAGAGGAGGGTGTTTTCTTCTCCCTGAGAGCCGGAGGCAATGGCCAAGGTGCCTGA 180
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      TCTCGGCTCCGACTTCGCCCAGAAGCTGCTGCTCGACCTCCGGCGCCGCCGCGAGAGGCT 240
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      CGGCTTCGACTCGCCGGCGCCGCCGCAGCGCACGTCGTCGTCCAACGCCGCCGTTCTTCC 300
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      TCGAGATTCTCATTCGAGTTCTCAGAGGCCACATCGAAGCCAGAAGCCACAACAAGCAGC 360
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      TCCTCGAGCAGGAAGAGCAGAAGCAACAGCAAACAGATCACACCCACAGAGCGGCAATGC 420
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      CATTGCCGGAGCCGGCAAGCCGCGCCACCGCGCCACGCCGGTCGCCAATTCGCACCAAAT 480
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      CGTGCCATTCCAAGGAGGAGGCAGCGCCAAGCAGAAGCCCGCGAACAGCAGCATCGACGT 540
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      GCAGATGGCGCTGGCAATCGCTCTCAGCAACAGAGGCAAGCTCCAGAACATCGAGCTCGT 600
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      GTCGCGCAACGGCTCCATCTTCTTCAGGGACACGGATCACGCCATGCCGGAGAGCCACCT 660
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      CGTGTCGCCCAGCGCGCACGTCGGCAAGGTGGCGATCGGCGTCAAGAAGCTCAATGACAT 720
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      CCTCATGGTGTACTCATCGGGCGGCGGCGCGAGGGACACGGGCAGGAGGAGCTCGGTTGA 780
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      CATTGGGAGGGAGCTCTTCGGAGGAGCCATGGATTTGGAGGAGTCACTAAGCATGCTTGT 840
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      GATGCTTCAGGAGGCATCAGATTACATGGAAGGATCCGGGAATGGCAAGGTGTTGCTACT 900
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      GGAGGGCAAGGAGAACTTGAAGAACTCGGCGCGTTCGCCGAGTTCCGCAAGGCTGGTGGA 960
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      GATTGTTGATGAGGATTCAGAGGCCGAGCAAGCCAAGAACTCGAAGAGTCTGTCAATGCA 1020
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      GATAGTTCCTCACAAGAATTCACAAGGTTTCAGTACTCCAAACAGCTCATCAGTCTTGCA 1080
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      GGTCTCTACTGTTACAGGCAACAATTCCAGGAGCAATTCTTCTAAAGCTGACAAGGATGA 1140
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      TGCAAAAGTCAGGATGCCTAATGTGATTGCCAAGCTGATGGGATTGGACAATCTTCCATC 1200
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      AACCAAGGTAGCAAACAAGGGCATGGAGAAGTTTGTGAAACCTGAAGCATTGTCAAGAAA 1260
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      GGATAGGAGGACGAATTTGGTCGGCGGCAGATTGCCGATTCAGATTATAGGTTCAGAAAG 1320
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      GGTGTCATCCAAAGGACACAACATGAATTTGCTGCCAGGTGAGTGGAAGATTGGCCTGAA 1380
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      AAATTATGAAGTATACAAAAGTGCTAATTTGCAGGTGTCTAATAGTTCATCGATTCCTGC 1440
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      GGCTGATAAGCAAACAAGGCAAACCATGAGACAAATGTTAAGCAAAATGGAGAATGCAGA 1500
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      GAGAAGAGGTAGTCTAGGACAACAACTCCATGAGGAGAAGAAACTGACTGAAGAAACTAA 1560
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      TCAGCAGAAGGTTGCGAATGTTGGATGCCGCACCGATGCAGGGAAAAAGATGGATTTTCT 1620
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      GAAAAGAATTAGGAAAATTTCAGGCAGCAGACAAGTCACTGAAGAGAAGCACATTATTCA 1680
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      AGAAGAGAGCACAACAGGGAAGAAGCAAACTACAAGCATGAAACAATTGCTGGGCACAGA 1740
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      CAGTGAGGATAAATCTAAGATAACTAGAGTTAAGTTTAACAAGGAAAACCTTGCCACTAC 1800
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      TGAAATCAAGAATGCAGCAAGAGGGAAGAACGGCAAAACAGATCAACGGAAGCGGCAATC 1860
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      ATACAATAAACAGACAGATGTACATAGCATGCCAAAGAAATCTCAGAAATATCGTGAAAT 1920
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      GAAGAGTAAAGAAGGCATTCAGAACTTAGAGCACAAGAGGTCAACAAAGTCAGAAGCGAC 1980
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      ACAATTGAAAATTCTCCCATATACTGCAGAGATACAGCAAGAGAATGGAAAGCATGAAGA 2040
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      AGATAATGATATTGTCAAGCCATCAGATAGCCATGGGGATGGAGGTATTTCTGAGCAATT 2100
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      TGCAGGAATGGTGGAAGACAGCAGAACAACTGGAATGGCTTCCCCAGACCAATTTATGAA 2160
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      GCAAATAACTGAAGTGACCTCAATTGATGTGCATGCAAGTGATAGATCAAATGTGGTAGA 2220
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      TCAGAGTGTAACTCAAACAAATGATGACACAGGTTCTAATACAGCTAGTGAAGCTACACA 2280
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      AACACCAGAGACATTCACAGAGGGGGAACATCACCAAAATCTGCAATTAGTGGAGTTTAA 2340
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      AGAGAAACCGTTGGATGATTTGGGTGATGCCAAAGAGACCAGCAATCCAACGGATTTGCA 2400
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      AGACCAAAAGATGCATGTGGTCTCGTGTGATTCATTCACAGAGAATCAGCTACTGCTTAT 2460
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      GAGAATGTTGCTAAAGGATCAATACTTGCTTGAAACTGCAAAGGCTCTTGTCAGAAATCC 2520
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      TGTCCCTGTACATTTTGTCAATGCCAGTGCAGATAGATGGTCAGAGAAAGGCAGCTCTCT 2580
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      TTTTTCAGATATAGCGCGGGAAGTTATCAGAAAGAAAGGTAAAAGAACTGAGGCAATTGT 2640
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      AGAAGTTAGCATGGCAAACACAACTAACATGAAATTGCAATACTTGGATGATCTTATCAT 2700
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      GGAACTGGATGGAGATATTGAGAGCCTGAACATCTCCAAGAAATCTCAACATCTGGGTGA 2760
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      AGATTGCACAGCTGAAAATTTGCGAATGATACTTCACAGGGACATGCAAAACAATCATCC 2820
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      GGATGCTAACTCGATGTGGGATTTCGGTTGGAACCGCATTTCTGACCTTCCGATTGAGAG 2880
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      AAATGAAGTCGTCAGGGATTTGGAGAAGAACATATTGGGTGGCATGATCACAGATGTAGC 2940
consensus_8613#1      ------------------------------------------------------------
                                                                                  

consensus_8613#0      AAGGGAGCTAATTGAATTATCAGTACGCCATGGGTGCTGTGCCTGTGAGGCCTGAGTGAG 3000
consensus_8613#1      -----------CGGNACGAGCGGCACGAGGNGGGGGGC---CCAGTNAGGCCTGANTGAG 46
                                   * *  * * * ***    *** *     ** ** ******** ****

consensus_8613#0      TGTCAGACTGACTTTGAAACGTGATACAAGAGTTGATTTCTGAAAGTGATTGATCTTAGG 3060
consensus_8613#1      TGTCAGACTGACTTTGAAACGTGATACAAGAGTTGATTTCTGAAAGTGATTGATCTTAGG 106
                      ************************************************************

consensus_8613#0      TTAGATTTGTATATTTACCAAGGTTTTCCAGTAAATATATACATGTATTTTTCAAAAA-- 3118
consensus_8613#1      TTAGATTTGTATATTTACCAAGGTTTTCCAGTAAATATATACATGTATTTTTGCAAGATT 166
                      ****************************************************  ** *  

consensus_8613#0      ------------------------------------------------------
consensus_8613#1      TCTGTACATAGANGAATTTGTACGTGCGTTGANCANCAGCATTCTCTGCCTGTC 220
                                                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)