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Oryza sativa
cluster # 8629 cluster # 8629       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8629#0 length = 1418 sequences # 5  

consensusID : consensus_8629#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1418
fasta sequence
                              [GCCGCCAGCGAAGCCGCGGCCGCGGCGGTACCCGAGGCAGTACCCCGGCGAGGCGGTGGGCGTCGCCGAGGAGATGCGGTTCGTCGCCATGCGCCTCCGGAACCCCAAGCGGACCACCCTCAAGATGGACGATACGGGGGCCGAGGAGGAGGTGGGCGATGGCGTCAGTGAGGATGCGTCGGCGTCAGAGGAGGAGGAGGAGGAGGAGGACGACGACGACGTGGTTGAGGAGGAGGAGGAGGGAGCGGGGTTGGAGGGGGAGTGGATGCCGAGCATGGAGGGGTTCGTCAAGTACCTGGTGGACAGCAAGCTCGTCTTCGACACCGTCGAGCGGATCGTAGCCGAGTCCACCGACGTCGCCTATGTTTACTTCAGGAAAAGTGGTCTGGAACGCTCAGCTAGAATTACAAAAGATTTGGAGTGGTTTGGAGGGCAAGGAATTGCAGTACCAGAGCCAAGTACTGCTGGATCAACATATGCAACTTATCTGACTGAACTTGCTGAGAGCAATGCCCCAGCCTTCCTTTCCCACTATTACAATATTTATTTTGCACATACAACTGGAGGGGTGGCTATAGGTAACAAGATATCCAAGAAAATTTTGGAAGGAAGGGAGCTAGAGTTTTACAAATGGGATTCTGATGTAGAACTTTTGCTAAAAGATACCAGGGAGAAGCTTAACGAACTTAGCAAGCATTGGTCTCGGAAGGACAGGAACTTGTGCTTGAAAGAAGCTGCAAAATGTTTCCAGCATTTGGGGCGGATTGTTCGCTTAATCATCTTATAGTTCCTCATAGATGAGCAACTGATCAAATCAACCTATAATCTATTCCTGAAGACAGGAAAGCTAGAGATATATTAAACTTGAGGCTTAGTGCAGTCATTTTTGTCGAAGACTACACGTCTTAACTATGTTGAAGTCTGGTACAGAAGGATCTTCTGGTGTGAGACTGAAGCTGATCAGCGAGCACTATCCTGGAGATTGAAAACACCAGGCCACAACAATAGCCTCTTTTCTGGCTTGCATGGTGGAGCTGCTCGTTGGAGTGAGCTCTTGCTTTCAGCAACTTCGAACTGTGCAAAGTTGAAGATGCTTGCTGCTGTCGATCAGGATCTCACGCGTTCAATCGCAATGATGCCAGCCTGACACAATTCACTTAGCAGCAGAACACCATGCTAGCCAGCCAGGATCCCCCCATGCCTGCCAAAGCTTCGTCTCCTCTTGTACCTCACCACATTATCCATTTATCCTTGCAATGAATTCGCTTTGCTTGTACCAATCCTAGCTACTACTACTACTACCATCTTACATTATCCTTGCAATCAATATTTTGCTTTTGCCTGTACCAACCCCTGGTGGAGTTTTTGCTGGACTGGAAATTGATGTACAAGTACTGTGTGTAAAAAAAAAAAAAAAA]

[+] EMBL AK073283             [GCCGCCAGCGAAGCCGCGGCCGCGGCGGTACCCGAGGCAGTACCCCGGCGAGGCGGTGGGCGTCGCCGAGGAGATGCGGTTCGTCGCCATGCGCCTCCGGAACCCCAAGCGGACCACCCTCAAGATGGACGATACGGGGGCCGAGGAGGAGGTGGGCGATGGCGTCAGTGAGGATGCGTCGGCGTCAGAGGAGGAGGAGGAGGAGGAGGACGACGACGACGTGGTTGAGGAGGAGGAGGAGGGAGCGGGGTTGGAGGGGGAGTGGATGCCGAGCATGGAGGGGTTCGTCAAGTACCTGGTGGACAGCAAGCTCGTCTTCGACACCGTCGAGCGGATCGTAGCCGAGTCCACCGACGTCGCCTATGTTTACTTCAGGAAAAGTGGTCTGGAACGCTCAGCTAGAATTACAAAAGATTTGGAGTGGTTTGGAGGGCAAGGAATTGCAGTACCAGAGCCAAGTACTGCTGGATCAACATATGCAACTTATCTGACTGAACTTGCTGAGAGCAATGCCCCAGCCTTCCTTTCCCACTATTACAATATTTATTTTGCACATACAACTGGAGGGGTGGCTATAGGTAACAAGATATCCAAGAAAATTTTGGAAGGAAGGGAGCTAGAGTTTTACAAATGGGATTCTGATGTAGAACTTTTGCTAAAAGATACCAGGGAGAAGCTTAACGAACTTAGCAAGCATTGGTCTCGGAAGGACAGGAACTTGTGCTTGAAAGAAGCTGCAAAATGTTTCCAGCATTTGGGGCGGATTGTTCGCTTAATCATCTTATAGTTCCTCATAGATGAGCAACTGATCAAATCAACCTATAATCTATTCCTGAAGACAGGAAAGCTAGAGATATATTAAACTTGAGGCTTAGTGCAGTCATTTTTGTCGAAGACTACACGTCTTAACTATGTTGAAGTCTGGTACAGAAGGATCTTCTGGTGTGAGACTGAAGCTGATCAGCGAGCACTATCCTGGAGATTGAAAACACCAGGCCACAACAATAGCCTCTTTTCTGGCTTGCATGGTGGAGCTGCTCGTTGGAGTGAGCTCTTGCTTTCAGCAACTTCGAACTGTGCAAAGTTGAAGATGCTTGCTGCTGTCGATCAGGATCTCACGCGTTCAATCGCAATGATGCCAGCCTGACACAATTCACTTAGCAGCAGAACACCATGCTAGCCAGCCAGGATCCCCCCATGCCTGCCAAAGCTTCGTCTCCTCTTGTACCTCACCACATTATCCATTTATCCTTGCAATGAATTCGCTTTGCTTGTACCAATCCTAGCTACTACTACTACTACCATCTTACATTAT                                                                                                       ]
[+] EMBL CB640263             [                                   GGCAGTACCCCGGCGAGGCGGTGGGCGTCGCCGAGGAGATGCGGTTCGTCGCCATGCGCCTCCGGAACCCCAAGCGGACCACCCTCAAGATGGACGATACGGGGGCCGAGGAGGAGGTGGGCGATGGCGTCAGTGAGGATGCGTCGGCGTCAGAGGAGGAGGAGGAGGAGGAGGACGACGACGACGTGGTTGAGGAGGAGGAGGAGGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AK061587             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCAGAGCCAAGTACTGCTGGATCAACATATGCAACTTATCTGACTGAACTTGCTGAGAGCAATGCCCCAGCCTTCCTTTCCCACTATTACAATATTTATTTTGCACATACAACTGGAGGGGTGGCTATAGGTAACAAGATATCCAAGAAAATTTTGGAAGGAAGGGAGCTAGAGTTTTACAAATGGGATTCTGATGTAGAACTTTTGCTAAAAGATACCAGGGAGAAGCTTAACGAACTTAGCAAGCATTGGTCTCGGAAGGACAGGAACTTGTGCTTGAAAGAAGCTGCAAAATGTTTCCAGCATTTGGGGCGGATTGTTCGCTTAATCATCTTATAGTTCCTCATAGATGAGCAACTGATCAAATCAACCTATAATCTATTCCTGAAGGCAGGAAAGCTAGAGATATATTAAACTTGAGGCTTAGTGCAGTCATTTTTGTCGAAGACTACACGTCTTAACTATGTTGAAGTCTGGTACAGAAGGATCTTCTGGTGTGAGACTGAAGCTGATCAGCGAGCACTATCCTGGAGATTGAAAACACCAGGCCACAACAATAGCCTCTTTTCTGGCTTGCATGGTGGAGCTGCTCGTTGGAGTGAGCTCTTGCTTTCAGCAACTTCGAACTGTGCAAAGTTGAAGATGCTTGCTGCTGTCGATCAGGATCTCACGCGTTCAATCGCAATGATGCCAGCCTGACACAATTCACTTAGCAGCAGAACACCATGCTAGCCAGCCAGGATCCCCCCATGCCTGCCAAAGCTTCGTCTCCTCTTGTACCTCACCACATTATCCATTTATCCTTGCAATGAATTCGCTTTGCTTGTACCAATCCTAGCTACTACTACTACTACCATCTTACA                                                                                                           ]
[-] EMBL CA761218             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GCTGCAAAATGTTTCCAGCATTTGGGGCGGATTGTTCGCTTAATCATCTTATAGTTCCTAATAGATGAGCAACTGATCAAATCAACCTATAATCTATTCCTGAAGACAGGAAAGCTACAGATATATTAAACTTGAGGCTTAGTGCAGTCATTTTTGTCGAAGACTACACGTCTTAACTATGTTGAAGTCTGGTACAGAAGGATCTTTTGGTGTGAGACTGAAGCTGATCAGCAAGCACTATCCTGGAGATTGAAAACACCAGGCCACAACAATAGCCTCTTTTCTGGCTTGCATGGTGGAGCTGCACGTTGGAGTGAGCTCTTGCTTTCAGCAACTTCGAACTGTGCAAAGTTGAAGATGCTTGCTGCTGTCGATCAGGATCTCACGCGTTCAATCGCAATGATGCCAGCCTGACACAATTCACTTAGCAGCAGAACACCATGCTAGCCAGCCAGGATCCCCCCATGCCTGCCAAAGCTTCGTCTCCTCTTGTACCTCACCACATTATCCATTTATCCTTGCAATGAATTCGCTTTGCTTGTACCAATCCTAGCTACTACTACTGCTACCATCTTACATTATCCTTGCAATCAATATTTTGCTTTTGCCTGTACCAACCCCTGGTGGAGTTTTTGCTGGACTGGAAATTGATGTACAAGTACTGTGTGTAAAAAAAAAAAAAAAA]
[+] EMBL AA750843             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GCGAGCACTATCCTGGAGATTGAAAACACCAGGCCACAACAATAGCCTCTTTTCTGGCTTGCATGGTGGAGCTGCACGTTGGAGTGAGCTCTTGCTTTCAGCGGCTTCGAACTGTGCAAAGTTGAAGATGCTTGCTGCTGTCGATCAGGATCTCACGCGTTCAATCGCAATGATGCCAGCCTGACACAATTCACTTAGCAGCAGAACACCATGCTAGCCAG                                                                                                                                                                                                                                          ]


>consensus_8629#0 GCCGCCAGCGAAGCCGCGGCCGCGGCGGTACCCGAGGCAGTACCCCGGCGAGGCGGTGGG CGTCGCCGAGGAGATGCGGTTCGTCGCCATGCGCCTCCGGAACCCCAAGCGGACCACCCT CAAGATGGACGATACGGGGGCCGAGGAGGAGGTGGGCGATGGCGTCAGTGAGGATGCGTC GGCGTCAGAGGAGGAGGAGGAGGAGGAGGACGACGACGACGTGGTTGAGGAGGAGGAGGA GGGAGCGGGGTTGGAGGGGGAGTGGATGCCGAGCATGGAGGGGTTCGTCAAGTACCTGGT GGACAGCAAGCTCGTCTTCGACACCGTCGAGCGGATCGTAGCCGAGTCCACCGACGTCGC CTATGTTTACTTCAGGAAAAGTGGTCTGGAACGCTCAGCTAGAATTACAAAAGATTTGGA GTGGTTTGGAGGGCAAGGAATTGCAGTACCAGAGCCAAGTACTGCTGGATCAACATATGC AACTTATCTGACTGAACTTGCTGAGAGCAATGCCCCAGCCTTCCTTTCCCACTATTACAA TATTTATTTTGCACATACAACTGGAGGGGTGGCTATAGGTAACAAGATATCCAAGAAAAT TTTGGAAGGAAGGGAGCTAGAGTTTTACAAATGGGATTCTGATGTAGAACTTTTGCTAAA AGATACCAGGGAGAAGCTTAACGAACTTAGCAAGCATTGGTCTCGGAAGGACAGGAACTT GTGCTTGAAAGAAGCTGCAAAATGTTTCCAGCATTTGGGGCGGATTGTTCGCTTAATCAT CTTATAGTTCCTCATAGATGAGCAACTGATCAAATCAACCTATAATCTATTCCTGAAGAC AGGAAAGCTAGAGATATATTAAACTTGAGGCTTAGTGCAGTCATTTTTGTCGAAGACTAC ACGTCTTAACTATGTTGAAGTCTGGTACAGAAGGATCTTCTGGTGTGAGACTGAAGCTGA TCAGCGAGCACTATCCTGGAGATTGAAAACACCAGGCCACAACAATAGCCTCTTTTCTGG CTTGCATGGTGGAGCTGCTCGTTGGAGTGAGCTCTTGCTTTCAGCAACTTCGAACTGTGC AAAGTTGAAGATGCTTGCTGCTGTCGATCAGGATCTCACGCGTTCAATCGCAATGATGCC AGCCTGACACAATTCACTTAGCAGCAGAACACCATGCTAGCCAGCCAGGATCCCCCCATG CCTGCCAAAGCTTCGTCTCCTCTTGTACCTCACCACATTATCCATTTATCCTTGCAATGA ATTCGCTTTGCTTGTACCAATCCTAGCTACTACTACTACTACCATCTTACATTATCCTTG CAATCAATATTTTGCTTTTGCCTGTACCAACCCCTGGTGGAGTTTTTGCTGGACTGGAAA TTGATGTACAAGTACTGTGTGTAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)