Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 8645 cluster # 8645       Sequences # 5       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8645#0 length = 2074 sequences # 2  
consensus_8645#1 length = 1861 sequences # 1  
consensus_8645#2 length = 1638 sequences # 1  
consensus_8645#3 length = 1159 sequences # 1  

consensusID : consensus_8645#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2074
fasta sequence
                              [GATTTATTTATTACTTTTTGCTCTTTTCCATTGACATTGGTACACGATTCCATCGAACGTGTGGACCATGGAAAACAAAAAAGATTTTTTTTTCTTTTTGCGGGGAAATCAATCTTTTTTAGTGTTGTTGTGATTGTCATGAGCCATGGCAAGTTAACAACGTGGGAAAGAGGAGACCAAGCAATTAGGCAGAAAGGAACAATTAGATGATGATATTATTGTCGTCGAAGAAAATCTCTATAAAGTCAATTCCCCTTAGAACAATATGGCAATATCTTTACAGTACTGTCAGTACAGCTACCTCTCCAAGAACAGTACAAAAGATTATGTGTCAGTGTCAATGACATATACTCCTGTTTAGAGCTAGTCAAATCCTATAAATTAATTCATATATCTTACTGTATTATCTTAATTTGGTGTTCCATTTGGACAATGATAATGATGCCCAACATTTCTACCATTCTTCAGCTGCACAGATGAAATTAATTACGCGCTGCATGTTCCATAAAAAGAATACAACAAAGAATACAACATAAATAGTAGATTGTAACGACGCATAATTACCTTATACCTCTCTCTTTCTCAGAATTTAAGGCCTGATCAAACTTGACAATAGTCTCCAAAACTAATATTTTTTTCGCATGTACTACCTCTATTTCAAAATATCTGTTGTTTTAGATTATTTAGTAAAGATTAATGCTTAAAAGGAAATGACCATAGCGCCCCCTATTAAATGATGTATGATGGGGAGTGTGTCGGTAGTTTAGAGTAGGATAGAGAAAATTTTCAATTAGAGGTAACTAATGTAACAAAAGGTACTTTTAAGTGACAAAGCTTTTTGACAAAATTTAAATCCTAAAGCGTCAATATTTTGGTACGGAGGAATTACTACACTGTCTATAGGAACAGAGTCATAGCTATAAGAAAGTATATTCAAATGTCAATCCCGAATCCAATAATACCGTTGTCAACAAGTAAAATTTAATTTACATCAAACTAATTGTCAGTAAAATATTATATTGTGATGAGGAGGAGTGAGTATTTTCCAAGCTTCACACAACAATCGATTTACGCGGCGCATTAATTTAACGATCTCTGCATCTGCATTGCACTACTGTGGATGGTTGATCATTTTGATTGATCACTTTCTCTGCAAACGCATGAACACGTACGCAGGCATGATCGCCGGGGGTTGGCTCAAGTACTGGATCGAGGTGGGCGCCGTGCTCTCCACCATCGGCCTCTACTCGGCGACGCTGAGCAGCGCCGCGTTCCAGCTCCTCGGCATGGCGGACCTGGGCCTCCTCCCGCGCGCCTTCGCGCTCCGGGCGCCGGTGTTCGACACGCCCTGGGTCGGCATCCTCGCCACCGCCGCCATCACCCTCGCCATGTCGTTCACCAGCTTCGACACCATCGTCGCCTCCGCCAACTTCCTCTACAGCCTCGGCATGCTGCTCGAGTTCGCCGCCTTCGTCCGCCTCCGCGCCAGGCTCCCCGCCATGCCCAGGCCCTACGCCGTGCCGCTCCGGGGCCTGCCCGCCGCCGCCGCCCTCTGCGCCGTCCCCTCGGCGTTCCTCGTCTTCGTCATGGCCATCGCCGGGTGGAAGGTGTACGCCATCAGCGCCGTCTTCACCGCCGCCGGCGT---CGCGGTGTACTACCTCATGGACCTCTGCAAGGCCAGAGGGTGGCTCACGTTCAGCGCCGCTGCCGCAGACCGCGGAGGCAGCGGCGACGACGCGATGATGTACCGGCGTCA-GGGGAGCA-CGGCGAGCGAGGTCGTCTGATGAGGGGATCGATCGTCGTCGACGCCATTGATTCCGGCGTTGCA-TTGCAAGCTGTATATGCTTTCCGATGTTTGTTTATCTGTGTGTGTGTGCGCGCTTCTTTCCTTGTGCA-GAAGAGCA-TAGGAATTGA-GTGATTTGTAA-CA-GTCTTAATTAGTCGTAGATGCTGATCA-AATCAAGAAATGGGTTGCATATTACTTTCNAATTAGCCAATTGTACATTCATGAAAGTGGTAGAACTAAAGAAGCATACATAAGCTCNAAGAGAAATTNTCGACCTCACTAAAAAAAAAA]

[+] EMBL AK107064             [GATTTATTTATTACTTTTTGCTCTTTTCCATTGACATTGGTACACGATTCCATCGAACGTGTGGACCATGGAAAACAAAAAAGATTTTTTTTTCTTTTTGCGGGGAAATCAATCTTTTTTAGTGTTGTTGTGATTGTCATGAGCCATGGCAAGTTAACAACGTGGGAAAGAGGAGACCAAGCAATTAGGCAGAAAGGAACAATTAGATGATGATATTATTGTCGTCGAAGAAAATCTCTATAAAGTCAATTCCCCTTAGAACAATATGGCAATATCTTTACAGTACTGTCAGTACAGCTACCTCTCCAAGAACAGTACAAAAGATTATGTGTCAGTGTCAATGACATATACTCCTGTTTAGAGCTAGTCAAATCCTATAAATTAATTCATATATCTTACTGTATTATCTTAATTTGGTGTTCCATTTGGACAATGATAATGATGCCCAACATTTCTACCATTCTTCAGCTGCACAGATGAAATTAATTACGCGCTGCATGTTCCATAAAAAGAATACAACAAAGAATACAACATAAATAGTAGATTGTAACGACGCATAATTACCTTATACCTCTCTCTTTCTCAGAATTTAAGGCCTGATCAAACTTGACAATAGTCTCCAAAACTAATATTTTTTTCGCATGTACTACCTCTATTTCAAAATATCTGTTGTTTTAGATTATTTAGTAAAGATTAATGCTTAAAAGGAAATGACCATAGCGCCCCCTATTAAATGATGTATGATGGGGAGTGTGTCGGTAGTTTAGAGTAGGATAGAGAAAATTTTCAATTAGAGGTAACTAATGTAACAAAAGGTACTTTTAAGTGACAAAGCTTTTTGACAAAATTTAAATCCTAAAGCGTCAATATTTTGGTACGGAGGAATTACTACACTGTCTATAGGAACAGAGTCATAGCTATAAGAAAGTATATTCAAATGTCAATCCCGAATCCAATAATACCGTTGTCAACAAGTAAAATTTAATTTACATCAAACTAATTGTCAGTAAAATATTATATTGTGATGAGGAGGAGTGAGTATTTTCCAAGCTTCACACAACAATCGATTTACGCGGCGCATTAATTTAACGATCTCTGCATCTGCATTGCACTACTGTGGATGGTTGATCATTTTGATTGATCACTTTCTCTGCAAACGCATGAACACGTACGCAGGCATGATCGCCGGGGGTTGGCTCAAGTACTGGATCGAGGTGGGCGCCGTGCTCTCCACCATCGGCCTCTACTCGGCGACGCTGAGCAGCGCCGCGTTCCAGCTCCTCGGCATGGCGGACCTGGGCCTCCTCCCGCGCGCCTTCGCGCTCCGGGCGCCGGTGTTCGACACGCCCTGGGTCGGCATCCTCGCCACCGCCGCCATCACCCTCGCCATGTCGTTCACCAGCTTCGACACCATCGTCGCCTCCGCCAACTTCCTCTACAGCCTCGGCATGCTGCTCGAGTTCGCCGCCTTCGTCCGCCTCCGCGCCAGGCTCCCCGCCATGCCCAGGCCCTACGCCGTGCCGCTCCGGGGCCTGCCCGCCGCCGCCGCCCTCTGCGCCGTCCCCTCGGCGTTCCTCGTCTTCGTCATGGCCATCGCCGGGTGGAAGGTGTACGCCATCAGCGCCGTCTTCACCGCCGCCGGCGT   CGCGGTGTACTACCTCATGGACCTCTGCAAGGCCAGAGGGTGGCTCACGTTCAGCGCCGCTGCCGCAGACCGCGGAGGCAGCGGCGACGACGCGATGATGTACCGGCGTCA GGGGAGCA CGGCGAGCGAGGTCGTCTGATGAGGGGATCGATCGTCGTCGACGCCATTGATTCCGGCGTTGCA TTGCAAGCTGTATATGCTTTCCGATGTTTGTTTATCTGTGTGTGTGTGCGCGCTTCTTTCCTTGTGCA GAAGAGCA TAGGAATTGA GTGATTTGTAA CA GTCTTAATTAGTCGTAGATGCTGATCA AATCAAGAAATGG                                                                                                           ]
[+] EMBL BM422017             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCGCGGAC GCGTGGGCCCGGTGTACTACCTCATGGACCTCTGCAAGGCCAGAGGGTGGCTCACGTTCAGCGCCGCTGCCGCAGACCGCGGAGGCAGCGGCGGCGACGCGATGATGTACCGGCGTCACGGGGAGCACCGGCGAGCGAGGTCGTCTGATGAGGGGATCGATCGTCGTCGACGCCCTTGATTCCGGCGTTGCACTTGC AGCTGTATATGCTTTCCGATGTTTGTTTATCTGTGTGTGTGTGCGCGCTTCTTTCCTTGTGCACGAAGAGCACTAGGAATTGAGGTGATTTGTAACCACGTCTTAATTAGTCGTAGATGCTGATCACAATC AGAAATGGGTTGCATATTACTTTCNAATTAGCCAATTGTACATTCATGAAAGTGGTAGAACTAAAGAAGCATACATAAGCTCNAAGAGAAATTNTCGACCTCACTAAAAAAAAAA]


>consensus_8645#0 GATTTATTTATTACTTTTTGCTCTTTTCCATTGACATTGGTACACGATTCCATCGAACGT GTGGACCATGGAAAACAAAAAAGATTTTTTTTTCTTTTTGCGGGGAAATCAATCTTTTTT AGTGTTGTTGTGATTGTCATGAGCCATGGCAAGTTAACAACGTGGGAAAGAGGAGACCAA GCAATTAGGCAGAAAGGAACAATTAGATGATGATATTATTGTCGTCGAAGAAAATCTCTA TAAAGTCAATTCCCCTTAGAACAATATGGCAATATCTTTACAGTACTGTCAGTACAGCTA CCTCTCCAAGAACAGTACAAAAGATTATGTGTCAGTGTCAATGACATATACTCCTGTTTA GAGCTAGTCAAATCCTATAAATTAATTCATATATCTTACTGTATTATCTTAATTTGGTGT TCCATTTGGACAATGATAATGATGCCCAACATTTCTACCATTCTTCAGCTGCACAGATGA AATTAATTACGCGCTGCATGTTCCATAAAAAGAATACAACAAAGAATACAACATAAATAG TAGATTGTAACGACGCATAATTACCTTATACCTCTCTCTTTCTCAGAATTTAAGGCCTGA TCAAACTTGACAATAGTCTCCAAAACTAATATTTTTTTCGCATGTACTACCTCTATTTCA AAATATCTGTTGTTTTAGATTATTTAGTAAAGATTAATGCTTAAAAGGAAATGACCATAG CGCCCCCTATTAAATGATGTATGATGGGGAGTGTGTCGGTAGTTTAGAGTAGGATAGAGA AAATTTTCAATTAGAGGTAACTAATGTAACAAAAGGTACTTTTAAGTGACAAAGCTTTTT GACAAAATTTAAATCCTAAAGCGTCAATATTTTGGTACGGAGGAATTACTACACTGTCTA TAGGAACAGAGTCATAGCTATAAGAAAGTATATTCAAATGTCAATCCCGAATCCAATAAT ACCGTTGTCAACAAGTAAAATTTAATTTACATCAAACTAATTGTCAGTAAAATATTATAT TGTGATGAGGAGGAGTGAGTATTTTCCAAGCTTCACACAACAATCGATTTACGCGGCGCA TTAATTTAACGATCTCTGCATCTGCATTGCACTACTGTGGATGGTTGATCATTTTGATTG ATCACTTTCTCTGCAAACGCATGAACACGTACGCAGGCATGATCGCCGGGGGTTGGCTCA AGTACTGGATCGAGGTGGGCGCCGTGCTCTCCACCATCGGCCTCTACTCGGCGACGCTGA GCAGCGCCGCGTTCCAGCTCCTCGGCATGGCGGACCTGGGCCTCCTCCCGCGCGCCTTCG CGCTCCGGGCGCCGGTGTTCGACACGCCCTGGGTCGGCATCCTCGCCACCGCCGCCATCA CCCTCGCCATGTCGTTCACCAGCTTCGACACCATCGTCGCCTCCGCCAACTTCCTCTACA GCCTCGGCATGCTGCTCGAGTTCGCCGCCTTCGTCCGCCTCCGCGCCAGGCTCCCCGCCA TGCCCAGGCCCTACGCCGTGCCGCTCCGGGGCCTGCCCGCCGCCGCCGCCCTCTGCGCCG TCCCCTCGGCGTTCCTCGTCTTCGTCATGGCCATCGCCGGGTGGAAGGTGTACGCCATCA GCGCCGTCTTCACCGCCGCCGGCGTCGCGGTGTACTACCTCATGGACCTCTGCAAGGCCA GAGGGTGGCTCACGTTCAGCGCCGCTGCCGCAGACCGCGGAGGCAGCGGCGACGACGCGA TGATGTACCGGCGTCAGGGGAGCACGGCGAGCGAGGTCGTCTGATGAGGGGATCGATCGT CGTCGACGCCATTGATTCCGGCGTTGCATTGCAAGCTGTATATGCTTTCCGATGTTTGTT TATCTGTGTGTGTGTGCGCGCTTCTTTCCTTGTGCAGAAGAGCATAGGAATTGAGTGATT TGTAACAGTCTTAATTAGTCGTAGATGCTGATCAAATCAAGAAATGGGTTGCATATTACT TTCNAATTAGCCAATTGTACATTCATGAAAGTGGTAGAACTAAAGAAGCATACATAAGCT CNAAGAGAAATTNTCGACCTCACTAAAAAAAAAA



consensusID : consensus_8645#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1861
fasta sequence
                              [TCGCATGAGTGAGCTCACCATGGACCAAGAAATCCAACTGAACCAGAGGCCATCGCCGCAGCGACAGCAACAAGCACAAGAACATGGCGGCGCCACCGCACCGGCGCCGGCGCCGGCGACGCCACAAGATGATGAACAGCAAGGGCACCAAGCAGCTGTCGCCAGGCATGGCTGCGGCGGCGCGACAGCCGAACGCCACCACCAGACCAAGCTCACGCTACTCCCGCTCGTCTTCTTCATCTACTTCGAGGTGGCCGGCGGCCCGTACGGCGCCGAGCAGGCCGTGAGCGCGGCGGGCCCGCTGTTCGCGCTGCTCGGCTTCCTCGCCTCCCCCTTCGCGTGGGGCGTCCCGGTGTCGCTCGTCACCGCAGAGCTCGCCGCCGCGCTCCCGGGGAACGGCGGCTTCGTCGTCTGGGCCGACCGCGCCTTCGGCCCGCTCGCCGGCTCCCTGCTCGGCACGTGGAAGTACCTCAGCTGCGTCATCAACCTCGCCGCGTTCCCGGCCCTCGTCGCCGACTACCTCGGCCGCGTCGCCCCGGCGGTCGCCGTCCCGGGAAGCAGGGCGCGCACGGGCACGGTGCTCGGCATGACCGTCTTCCTCTCCTTCCTCAACTTGGGCGGCCTAAGCATTGTCGGGTGGGGCGCGGTGGCCCTGGGGTTCGTGTCGCTGGCGCCGTTCGTGCTGATGACGGCGATGGCGGCGCCGAGGACGCGGCCGCGGCGGTGGGCGGCGCGGGTGCAGGTGAAGGGGAAGAGAGACTGGAGGCTCTTCTTCAACACGCTCTTCTGGAACCTCAACTACTGGGACAGCGCGAGCACCATGGCCGGCGAGGTGGAGCGGCCGGAGCGGACGTTCCCGCGGGCGCTCGCGGTGGCGGTGGTGCTCATCGCCGTCAGCTACCTGCTGCCGCTCATGGCGGCGGTCGGCGCCACGGACGCGCCGCCGGAGGCGTGGGAGAACGGCTACTTGGCTGACGCAGCAGCGACGAAGCTTGTGAGGAATCTCAAGGGACCAGCTACAAGTATTCCACTCTACCAAAACTACAATTCACTGCATCATCGGCGGGCGGTGGCTCAAGTACTGGACGGAGGCCGGCGCGGTGCTCTCCTCCGTCGGGTTGTTCGAAGCGCAGCTGAGCAGCGGCGCGTTCCAGCTCCTCGGCATGGCGGAGCTGGGCCTCCTCCCCTCCGTCTTCGCCCGCCGCGGCCCCGGACGATCCGCCACCCCGTGGGTCGCCGTCGCCGCCTCCGCCGCCGTCTCGGTCGCCGTCTCCTTCCTCGGCTTCGACGACGTCGTCGCCACCGCCAACCTGCTCTACAGCCTCGGCGCGCTGCTCGAGTTCGCCGCCTTCCTCCGGCTCCGCGCGAGGGAGGAGAGCCCCTCCTCGCTCAAGCGCCCCTACCGCGTCCCGCTGCCGCTCCCCGCGCTCGCCGCCATGTGCCTCGTGCCGTCGGCGTTCCTGGCGTACGTGGTCGCCGTCGCCGGGTGGAGGGTCTCCGCCGTCGCCGCCGCGCTCACGGCCCTCGGCGTCGGCTGGCACGGCGCCATGAGGGTGTGCAGGTCCAGGAAGTGGCTCAGGTTCAACACCGCGGTTGCCGCCGACCATCGTCTGCAACTACAAGATGCTCCTCCTCCTCCTGCTGGTAGAGTCTGAACTCTGAACCCGTTTTGGCAGATTTCGTCTTGCGAAAAGATGAAACACGGTAAGAAACTCGAAATATTTGCTAGTAGAAGACTAATTACAAGCTATACTAGTACAAGACTAATTACATGGTTGGATGAAGCTCTAAAGTTGGCGTTTTCATATTTGTTCCTCTAATTAATCACCGTGTACGATTGTGGTTCATTATCAGAGACGCG]

[+] EMBL AK072316             [TCGCATGAGTGAGCTCACCATGGACCAAGAAATCCAACTGAACCAGAGGCCATCGCCGCAGCGACAGCAACAAGCACAAGAACATGGCGGCGCCACCGCACCGGCGCCGGCGCCGGCGACGCCACAAGATGATGAACAGCAAGGGCACCAAGCAGCTGTCGCCAGGCATGGCTGCGGCGGCGCGACAGCCGAACGCCACCACCAGACCAAGCTCACGCTACTCCCGCTCGTCTTCTTCATCTACTTCGAGGTGGCCGGCGGCCCGTACGGCGCCGAGCAGGCCGTGAGCGCGGCGGGCCCGCTGTTCGCGCTGCTCGGCTTCCTCGCCTCCCCCTTCGCGTGGGGCGTCCCGGTGTCGCTCGTCACCGCAGAGCTCGCCGCCGCGCTCCCGGGGAACGGCGGCTTCGTCGTCTGGGCCGACCGCGCCTTCGGCCCGCTCGCCGGCTCCCTGCTCGGCACGTGGAAGTACCTCAGCTGCGTCATCAACCTCGCCGCGTTCCCGGCCCTCGTCGCCGACTACCTCGGCCGCGTCGCCCCGGCGGTCGCCGTCCCGGGAAGCAGGGCGCGCACGGGCACGGTGCTCGGCATGACCGTCTTCCTCTCCTTCCTCAACTTGGGCGGCCTAAGCATTGTCGGGTGGGGCGCGGTGGCCCTGGGGTTCGTGTCGCTGGCGCCGTTCGTGCTGATGACGGCGATGGCGGCGCCGAGGACGCGGCCGCGGCGGTGGGCGGCGCGGGTGCAGGTGAAGGGGAAGAGAGACTGGAGGCTCTTCTTCAACACGCTCTTCTGGAACCTCAACTACTGGGACAGCGCGAGCACCATGGCCGGCGAGGTGGAGCGGCCGGAGCGGACGTTCCCGCGGGCGCTCGCGGTGGCGGTGGTGCTCATCGCCGTCAGCTACCTGCTGCCGCTCATGGCGGCGGTCGGCGCCACGGACGCGCCGCCGGAGGCGTGGGAGAACGGCTACTTGGCTGACGCAGCAGCGACGAAGCTTGTGAGGAATCTCAAGGGACCAGCTACAAGTATTCCACTCTACCAAAACTACAATTCACTGCATCATCGGCGGGCGGTGGCTCAAGTACTGGACGGAGGCCGGCGCGGTGCTCTCCTCCGTCGGGTTGTTCGAAGCGCAGCTGAGCAGCGGCGCGTTCCAGCTCCTCGGCATGGCGGAGCTGGGCCTCCTCCCCTCCGTCTTCGCCCGCCGCGGCCCCGGACGATCCGCCACCCCGTGGGTCGCCGTCGCCGCCTCCGCCGCCGTCTCGGTCGCCGTCTCCTTCCTCGGCTTCGACGACGTCGTCGCCACCGCCAACCTGCTCTACAGCCTCGGCGCGCTGCTCGAGTTCGCCGCCTTCCTCCGGCTCCGCGCGAGGGAGGAGAGCCCCTCCTCGCTCAAGCGCCCCTACCGCGTCCCGCTGCCGCTCCCCGCGCTCGCCGCCATGTGCCTCGTGCCGTCGGCGTTCCTGGCGTACGTGGTCGCCGTCGCCGGGTGGAGGGTCTCCGCCGTCGCCGCCGCGCTCACGGCCCTCGGCGTCGGCTGGCACGGCGCCATGAGGGTGTGCAGGTCCAGGAAGTGGCTCAGGTTCAACACCGCGGTTGCCGCCGACCATCGTCTGCAACTACAAGATGCTCCTCCTCCTCCTGCTGGTAGAGTCTGAACTCTGAACCCGTTTTGGCAGATTTCGTCTTGCGAAAAGATGAAACACGGTAAGAAACTCGAAATATTTGCTAGTAGAAGACTAATTACAAGCTATACTAGTACAAGACTAATTACATGGTTGGATGAAGCTCTAAAGTTGGCGTTTTCATATTTGTTCCTCTAATTAATCACCGTGTACGATTGTGGTTCATTATCAGAGACGCG]


>consensus_8645#1 TCGCATGAGTGAGCTCACCATGGACCAAGAAATCCAACTGAACCAGAGGCCATCGCCGCA GCGACAGCAACAAGCACAAGAACATGGCGGCGCCACCGCACCGGCGCCGGCGCCGGCGAC GCCACAAGATGATGAACAGCAAGGGCACCAAGCAGCTGTCGCCAGGCATGGCTGCGGCGG CGCGACAGCCGAACGCCACCACCAGACCAAGCTCACGCTACTCCCGCTCGTCTTCTTCAT CTACTTCGAGGTGGCCGGCGGCCCGTACGGCGCCGAGCAGGCCGTGAGCGCGGCGGGCCC GCTGTTCGCGCTGCTCGGCTTCCTCGCCTCCCCCTTCGCGTGGGGCGTCCCGGTGTCGCT CGTCACCGCAGAGCTCGCCGCCGCGCTCCCGGGGAACGGCGGCTTCGTCGTCTGGGCCGA CCGCGCCTTCGGCCCGCTCGCCGGCTCCCTGCTCGGCACGTGGAAGTACCTCAGCTGCGT CATCAACCTCGCCGCGTTCCCGGCCCTCGTCGCCGACTACCTCGGCCGCGTCGCCCCGGC GGTCGCCGTCCCGGGAAGCAGGGCGCGCACGGGCACGGTGCTCGGCATGACCGTCTTCCT CTCCTTCCTCAACTTGGGCGGCCTAAGCATTGTCGGGTGGGGCGCGGTGGCCCTGGGGTT CGTGTCGCTGGCGCCGTTCGTGCTGATGACGGCGATGGCGGCGCCGAGGACGCGGCCGCG GCGGTGGGCGGCGCGGGTGCAGGTGAAGGGGAAGAGAGACTGGAGGCTCTTCTTCAACAC GCTCTTCTGGAACCTCAACTACTGGGACAGCGCGAGCACCATGGCCGGCGAGGTGGAGCG GCCGGAGCGGACGTTCCCGCGGGCGCTCGCGGTGGCGGTGGTGCTCATCGCCGTCAGCTA CCTGCTGCCGCTCATGGCGGCGGTCGGCGCCACGGACGCGCCGCCGGAGGCGTGGGAGAA CGGCTACTTGGCTGACGCAGCAGCGACGAAGCTTGTGAGGAATCTCAAGGGACCAGCTAC AAGTATTCCACTCTACCAAAACTACAATTCACTGCATCATCGGCGGGCGGTGGCTCAAGT ACTGGACGGAGGCCGGCGCGGTGCTCTCCTCCGTCGGGTTGTTCGAAGCGCAGCTGAGCA GCGGCGCGTTCCAGCTCCTCGGCATGGCGGAGCTGGGCCTCCTCCCCTCCGTCTTCGCCC GCCGCGGCCCCGGACGATCCGCCACCCCGTGGGTCGCCGTCGCCGCCTCCGCCGCCGTCT CGGTCGCCGTCTCCTTCCTCGGCTTCGACGACGTCGTCGCCACCGCCAACCTGCTCTACA GCCTCGGCGCGCTGCTCGAGTTCGCCGCCTTCCTCCGGCTCCGCGCGAGGGAGGAGAGCC CCTCCTCGCTCAAGCGCCCCTACCGCGTCCCGCTGCCGCTCCCCGCGCTCGCCGCCATGT GCCTCGTGCCGTCGGCGTTCCTGGCGTACGTGGTCGCCGTCGCCGGGTGGAGGGTCTCCG CCGTCGCCGCCGCGCTCACGGCCCTCGGCGTCGGCTGGCACGGCGCCATGAGGGTGTGCA GGTCCAGGAAGTGGCTCAGGTTCAACACCGCGGTTGCCGCCGACCATCGTCTGCAACTAC AAGATGCTCCTCCTCCTCCTGCTGGTAGAGTCTGAACTCTGAACCCGTTTTGGCAGATTT CGTCTTGCGAAAAGATGAAACACGGTAAGAAACTCGAAATATTTGCTAGTAGAAGACTAA TTACAAGCTATACTAGTACAAGACTAATTACATGGTTGGATGAAGCTCTAAAGTTGGCGT TTTCATATTTGTTCCTCTAATTAATCACCGTGTACGATTGTGGTTCATTATCAGAGACGC G



consensusID : consensus_8645#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1638
fasta sequence
                              [CCCGATCGGGGTCCTTTTTCTCTTTTTTTTTCTTTTTCTTTTTCTCCCAATACAAAAGACACTATAATTTTTTAAAAAGTATCAATACAAAATGTTTTTAATATTACTTAAAATATGTGTTCATATATTTAAAAAAAATTTGGCACACGAAGTAAACAGAGCCTTAATTTCCTGGATAGTCTGCCACAACAGGCTAGCCTTAACGTTGGCACTGTCAGTTTCCAGGATAACCGGCGTCTGAATCCATTCTGCTGCTAGCCGAAGCCCGTTTCTGCACGCAAACGCTTCTGCTTCCTCGGCCCACTGACAACTGCGATACATATTCCATGAAGTCAGGAGCACGTCACCCATATGATCGCGAATGACAATGCCAGTTCAATCATTCATCTATTCGGCTCTTCAGCGTTCCATTCAATTCTCAATCTTATAAAAAAAAGAAAGGAAAAACACCACTCTCGACAAGATGGGTTAGAGCATCACCAATGTATATGTCAAAGTGATCCATATAGATGAGACCTATATAAATTGTTTTTCCCTATAGCAATCTCCACAGTGTATATAGATACAAGGTATCAATAGAAGAAGAGAGAGGAGTAGAGATAGATAATATAATTTATTCCATATGGGTAGTCCATATGCATATGGGTATCTTTTGTTATTTTTTCCATATGGACTAGTTGCACAATGGTTATAGATGGCTGAATAAAATATTCTATTGCTTATGAACTACTTTTACACCACATTGTGGATGCCCTTACAGCGACGAAGCTTGTGAGGAATCTCAAGGGACCAGCTACAAGTATTCCACTCTACCAAAACTACAATTCACTGCATCATCGGCGGGCGGTGGCTCAAGTACTGGACGGAGGCCGGCGCGGTGCTCTCCTCCGTCGGGTTGTTCGAAGCGCAGCTGAGCAGCGGCGCGTTCCAGCTCCTCGGCATGGCGGAGCTGGGCCTCCTCCCCTCCGTCTTCGCCCGCCGCGGCCCCGGACGATCCGCCACCCCGTGGGTCGCCGTCGCCGCCTCCGCCGCCGTCTCGGTCGCCGTCTCCTTCCTCGGCTTCGACGACGTCGTCGCCACCGCCAACCTGCTCTACAGCCTCGGCGCGCTGCTCGAGTTCGCCGCCTTCCTCCGGCTCCGCGCGAGGGAGGAGAGCCCCTCCTCGCTCAAGCGCCCCTACCGCGTCCCGCTGCCGCTCCCCGCGCTCGCCGCCATGTGCCTCGTGCCGTCGGCGTTCCTGGCGTACGTGGTCGCCGTCGCCGGGTGGAGGGTCTCCGCCGTCGCCGCCGCGCTCACGGCCCTCGGCGTCGGCTGGCACGGCGCCATGAGGGTGTGCAGGTCCAGGAAGTGGCTCAGGTTCAACACCGCGGTTGCCGCCGACCATCGTCTGCAACTACAAGATGCTCCTCCTCCTCCTGCTGGTAGAGTCTGAACTCTGAACCCGTTTTGGCAGATTTCGTCTTGCGAAAAGATGAAACACGGTAAGAAACTCGAAATATTTGCTAGTAGAAGACTAATTACAAGCTATACTAGTACAAGACTAATTACATGGTTGGATGAAGCTCTAAAGTTGGCGTTTTCATATTTGTTCCTCTAATTAATCACCGTGTACGATTGTGGTTCATTATCAGAGACGCG]

[+] EMBL AK070119             [CCCGATCGGGGTCCTTTTTCTCTTTTTTTTTCTTTTTCTTTTTCTCCCAATACAAAAGACACTATAATTTTTTAAAAAGTATCAATACAAAATGTTTTTAATATTACTTAAAATATGTGTTCATATATTTAAAAAAAATTTGGCACACGAAGTAAACAGAGCCTTAATTTCCTGGATAGTCTGCCACAACAGGCTAGCCTTAACGTTGGCACTGTCAGTTTCCAGGATAACCGGCGTCTGAATCCATTCTGCTGCTAGCCGAAGCCCGTTTCTGCACGCAAACGCTTCTGCTTCCTCGGCCCACTGACAACTGCGATACATATTCCATGAAGTCAGGAGCACGTCACCCATATGATCGCGAATGACAATGCCAGTTCAATCATTCATCTATTCGGCTCTTCAGCGTTCCATTCAATTCTCAATCTTATAAAAAAAAGAAAGGAAAAACACCACTCTCGACAAGATGGGTTAGAGCATCACCAATGTATATGTCAAAGTGATCCATATAGATGAGACCTATATAAATTGTTTTTCCCTATAGCAATCTCCACAGTGTATATAGATACAAGGTATCAATAGAAGAAGAGAGAGGAGTAGAGATAGATAATATAATTTATTCCATATGGGTAGTCCATATGCATATGGGTATCTTTTGTTATTTTTTCCATATGGACTAGTTGCACAATGGTTATAGATGGCTGAATAAAATATTCTATTGCTTATGAACTACTTTTACACCACATTGTGGATGCCCTTACAGCGACGAAGCTTGTGAGGAATCTCAAGGGACCAGCTACAAGTATTCCACTCTACCAAAACTACAATTCACTGCATCATCGGCGGGCGGTGGCTCAAGTACTGGACGGAGGCCGGCGCGGTGCTCTCCTCCGTCGGGTTGTTCGAAGCGCAGCTGAGCAGCGGCGCGTTCCAGCTCCTCGGCATGGCGGAGCTGGGCCTCCTCCCCTCCGTCTTCGCCCGCCGCGGCCCCGGACGATCCGCCACCCCGTGGGTCGCCGTCGCCGCCTCCGCCGCCGTCTCGGTCGCCGTCTCCTTCCTCGGCTTCGACGACGTCGTCGCCACCGCCAACCTGCTCTACAGCCTCGGCGCGCTGCTCGAGTTCGCCGCCTTCCTCCGGCTCCGCGCGAGGGAGGAGAGCCCCTCCTCGCTCAAGCGCCCCTACCGCGTCCCGCTGCCGCTCCCCGCGCTCGCCGCCATGTGCCTCGTGCCGTCGGCGTTCCTGGCGTACGTGGTCGCCGTCGCCGGGTGGAGGGTCTCCGCCGTCGCCGCCGCGCTCACGGCCCTCGGCGTCGGCTGGCACGGCGCCATGAGGGTGTGCAGGTCCAGGAAGTGGCTCAGGTTCAACACCGCGGTTGCCGCCGACCATCGTCTGCAACTACAAGATGCTCCTCCTCCTCCTGCTGGTAGAGTCTGAACTCTGAACCCGTTTTGGCAGATTTCGTCTTGCGAAAAGATGAAACACGGTAAGAAACTCGAAATATTTGCTAGTAGAAGACTAATTACAAGCTATACTAGTACAAGACTAATTACATGGTTGGATGAAGCTCTAAAGTTGGCGTTTTCATATTTGTTCCTCTAATTAATCACCGTGTACGATTGTGGTTCATTATCAGAGACGCG]


>consensus_8645#2 CCCGATCGGGGTCCTTTTTCTCTTTTTTTTTCTTTTTCTTTTTCTCCCAATACAAAAGAC ACTATAATTTTTTAAAAAGTATCAATACAAAATGTTTTTAATATTACTTAAAATATGTGT TCATATATTTAAAAAAAATTTGGCACACGAAGTAAACAGAGCCTTAATTTCCTGGATAGT CTGCCACAACAGGCTAGCCTTAACGTTGGCACTGTCAGTTTCCAGGATAACCGGCGTCTG AATCCATTCTGCTGCTAGCCGAAGCCCGTTTCTGCACGCAAACGCTTCTGCTTCCTCGGC CCACTGACAACTGCGATACATATTCCATGAAGTCAGGAGCACGTCACCCATATGATCGCG AATGACAATGCCAGTTCAATCATTCATCTATTCGGCTCTTCAGCGTTCCATTCAATTCTC AATCTTATAAAAAAAAGAAAGGAAAAACACCACTCTCGACAAGATGGGTTAGAGCATCAC CAATGTATATGTCAAAGTGATCCATATAGATGAGACCTATATAAATTGTTTTTCCCTATA GCAATCTCCACAGTGTATATAGATACAAGGTATCAATAGAAGAAGAGAGAGGAGTAGAGA TAGATAATATAATTTATTCCATATGGGTAGTCCATATGCATATGGGTATCTTTTGTTATT TTTTCCATATGGACTAGTTGCACAATGGTTATAGATGGCTGAATAAAATATTCTATTGCT TATGAACTACTTTTACACCACATTGTGGATGCCCTTACAGCGACGAAGCTTGTGAGGAAT CTCAAGGGACCAGCTACAAGTATTCCACTCTACCAAAACTACAATTCACTGCATCATCGG CGGGCGGTGGCTCAAGTACTGGACGGAGGCCGGCGCGGTGCTCTCCTCCGTCGGGTTGTT CGAAGCGCAGCTGAGCAGCGGCGCGTTCCAGCTCCTCGGCATGGCGGAGCTGGGCCTCCT CCCCTCCGTCTTCGCCCGCCGCGGCCCCGGACGATCCGCCACCCCGTGGGTCGCCGTCGC CGCCTCCGCCGCCGTCTCGGTCGCCGTCTCCTTCCTCGGCTTCGACGACGTCGTCGCCAC CGCCAACCTGCTCTACAGCCTCGGCGCGCTGCTCGAGTTCGCCGCCTTCCTCCGGCTCCG CGCGAGGGAGGAGAGCCCCTCCTCGCTCAAGCGCCCCTACCGCGTCCCGCTGCCGCTCCC CGCGCTCGCCGCCATGTGCCTCGTGCCGTCGGCGTTCCTGGCGTACGTGGTCGCCGTCGC CGGGTGGAGGGTCTCCGCCGTCGCCGCCGCGCTCACGGCCCTCGGCGTCGGCTGGCACGG CGCCATGAGGGTGTGCAGGTCCAGGAAGTGGCTCAGGTTCAACACCGCGGTTGCCGCCGA CCATCGTCTGCAACTACAAGATGCTCCTCCTCCTCCTGCTGGTAGAGTCTGAACTCTGAA CCCGTTTTGGCAGATTTCGTCTTGCGAAAAGATGAAACACGGTAAGAAACTCGAAATATT TGCTAGTAGAAGACTAATTACAAGCTATACTAGTACAAGACTAATTACATGGTTGGATGA AGCTCTAAAGTTGGCGTTTTCATATTTGTTCCTCTAATTAATCACCGTGTACGATTGTGG TTCATTATCAGAGACGCG



consensusID : consensus_8645#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1159
fasta sequence
                              [AGCTCGCATGAGTGAGCTCACCATGGACCAAGAAATCCAACTGAACCAGAGGCCATCGCCGCAGCGACAGCAACAAGCACAAGAACATGGCGGCGCCACCGCACCGGCGCCGGCGCCGGCGACGCCACAAGATGATGAACAGCAAGGGCACCAAGCAGCTGTCGCCAGGCATGGCTGCGGCGGCGCGACAGCCGAACGCCACCACCAGACCAAGCTCACGCTACTCCCGCTCGTCTTCTTCATCTACTTCGAGGTGGCCGGCGGCCCGTACGGCGCCGAGCAGGCCGTGAGCGCGGCGGGCCCGCTGTTCGCGCTGCTCGGCTTCCTCGCCTTCCCCTTCGCGTGGGGCGTCCCGGTGTCGCTCGTCACCGCAGAGCTCGCCGCCGCGCTCCCGGGGAACGGCGGCTTCGTCGTCTGGGCCGACCGCGCCTTCGGCCCGCTCGCCGGCTCCCTGCTCGGCACGTGGAAGTACCTCAGCTGCGTCATCAACCTCGCCGCGTTCCCGGCCCTCGTCGCCGACTACCTCGGCCGCGTCGCCCCGGCGGTCGCCGTCCCGGGAAGCAGGGCGCGCACGGGCACGGTGCTCGGCATGACCGTCTTCCTCTCCTTCCTCAACTTGGGCGGCCTAAGCATTGTCGGGTGGGGCGCGGTGGCCCTGGGGTTCGTGTCGCTGGCGCCGTTCGTGCTGATGACGGCGATGGCGGCGCCGAGGACGCGGCCGCGGCGGTGGGCGGCGCGGGTGCAGGTGAAGGGGAAGAGAGACTGGAGGCTCTTCTTCAACACGCTCTTCTGGAACCTCAACTACTGGGACAGCGCGAGCACCATGGCCGGCGAGGTGGAGCGGCCGGAGCGGACGTTCCCGCGGGCGCTCGCGGTGGCGGTGGTGCTCATCGCCGTCAGCTACCTGCTGCCGCTCATGGCGGCGGTCGGCGCCACGGACGCGCCGCCGGAGGCGTGGGAGAACGGCTACTTGGCTGACGCAGCAGGTACGTAGTACGTGTGTACGTATATACGCTGACGCGATTACGATATTGATGATGTCACAGCTTCTTTTATCAACAAACAAAACACACATGATGTCTCCGGCAGATCGCCGTACCGGTAATTGTCGCCGTTGTTTATTACTTTATGAGTTATTTACTCATCATATGAAAAAGAT]

[+] EMBL AK064716             [AGCTCGCATGAGTGAGCTCACCATGGACCAAGAAATCCAACTGAACCAGAGGCCATCGCCGCAGCGACAGCAACAAGCACAAGAACATGGCGGCGCCACCGCACCGGCGCCGGCGCCGGCGACGCCACAAGATGATGAACAGCAAGGGCACCAAGCAGCTGTCGCCAGGCATGGCTGCGGCGGCGCGACAGCCGAACGCCACCACCAGACCAAGCTCACGCTACTCCCGCTCGTCTTCTTCATCTACTTCGAGGTGGCCGGCGGCCCGTACGGCGCCGAGCAGGCCGTGAGCGCGGCGGGCCCGCTGTTCGCGCTGCTCGGCTTCCTCGCCTTCCCCTTCGCGTGGGGCGTCCCGGTGTCGCTCGTCACCGCAGAGCTCGCCGCCGCGCTCCCGGGGAACGGCGGCTTCGTCGTCTGGGCCGACCGCGCCTTCGGCCCGCTCGCCGGCTCCCTGCTCGGCACGTGGAAGTACCTCAGCTGCGTCATCAACCTCGCCGCGTTCCCGGCCCTCGTCGCCGACTACCTCGGCCGCGTCGCCCCGGCGGTCGCCGTCCCGGGAAGCAGGGCGCGCACGGGCACGGTGCTCGGCATGACCGTCTTCCTCTCCTTCCTCAACTTGGGCGGCCTAAGCATTGTCGGGTGGGGCGCGGTGGCCCTGGGGTTCGTGTCGCTGGCGCCGTTCGTGCTGATGACGGCGATGGCGGCGCCGAGGACGCGGCCGCGGCGGTGGGCGGCGCGGGTGCAGGTGAAGGGGAAGAGAGACTGGAGGCTCTTCTTCAACACGCTCTTCTGGAACCTCAACTACTGGGACAGCGCGAGCACCATGGCCGGCGAGGTGGAGCGGCCGGAGCGGACGTTCCCGCGGGCGCTCGCGGTGGCGGTGGTGCTCATCGCCGTCAGCTACCTGCTGCCGCTCATGGCGGCGGTCGGCGCCACGGACGCGCCGCCGGAGGCGTGGGAGAACGGCTACTTGGCTGACGCAGCAGGTACGTAGTACGTGTGTACGTATATACGCTGACGCGATTACGATATTGATGATGTCACAGCTTCTTTTATCAACAAACAAAACACACATGATGTCTCCGGCAGATCGCCGTACCGGTAATTGTCGCCGTTGTTTATTACTTTATGAGTTATTTACTCATCATATGAAAAAGAT]


>consensus_8645#3 AGCTCGCATGAGTGAGCTCACCATGGACCAAGAAATCCAACTGAACCAGAGGCCATCGCC GCAGCGACAGCAACAAGCACAAGAACATGGCGGCGCCACCGCACCGGCGCCGGCGCCGGC GACGCCACAAGATGATGAACAGCAAGGGCACCAAGCAGCTGTCGCCAGGCATGGCTGCGG CGGCGCGACAGCCGAACGCCACCACCAGACCAAGCTCACGCTACTCCCGCTCGTCTTCTT CATCTACTTCGAGGTGGCCGGCGGCCCGTACGGCGCCGAGCAGGCCGTGAGCGCGGCGGG CCCGCTGTTCGCGCTGCTCGGCTTCCTCGCCTTCCCCTTCGCGTGGGGCGTCCCGGTGTC GCTCGTCACCGCAGAGCTCGCCGCCGCGCTCCCGGGGAACGGCGGCTTCGTCGTCTGGGC CGACCGCGCCTTCGGCCCGCTCGCCGGCTCCCTGCTCGGCACGTGGAAGTACCTCAGCTG CGTCATCAACCTCGCCGCGTTCCCGGCCCTCGTCGCCGACTACCTCGGCCGCGTCGCCCC GGCGGTCGCCGTCCCGGGAAGCAGGGCGCGCACGGGCACGGTGCTCGGCATGACCGTCTT CCTCTCCTTCCTCAACTTGGGCGGCCTAAGCATTGTCGGGTGGGGCGCGGTGGCCCTGGG GTTCGTGTCGCTGGCGCCGTTCGTGCTGATGACGGCGATGGCGGCGCCGAGGACGCGGCC GCGGCGGTGGGCGGCGCGGGTGCAGGTGAAGGGGAAGAGAGACTGGAGGCTCTTCTTCAA CACGCTCTTCTGGAACCTCAACTACTGGGACAGCGCGAGCACCATGGCCGGCGAGGTGGA GCGGCCGGAGCGGACGTTCCCGCGGGCGCTCGCGGTGGCGGTGGTGCTCATCGCCGTCAG CTACCTGCTGCCGCTCATGGCGGCGGTCGGCGCCACGGACGCGCCGCCGGAGGCGTGGGA GAACGGCTACTTGGCTGACGCAGCAGGTACGTAGTACGTGTGTACGTATATACGCTGACG CGATTACGATATTGATGATGTCACAGCTTCTTTTATCAACAAACAAAACACACATGATGT CTCCGGCAGATCGCCGTACCGGTAATTGTCGCCGTTGTTTATTACTTTATGAGTTATTTA CTCATCATATGAAAAAGAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8645#1      -------------------------------TCGCATGAGTGAGCT-CACCATGGACCAA 28
consensus_8645#3      ----------------------------AGCTCGCATGAGTGAGCT-CACCATGGACCAA 31
consensus_8645#2      ------------------------------------------------------------
consensus_8645#0      GATTTATTTATTACTTTTTGCTCTTTTCCATTGACATTGGTACACGATTCCATCGAACGT 60
                                                                                  

consensus_8645#1      GAAATCCAACTGAACCAGAGGCCATCGCCGCAGCGACAGCAACAAGCACAAGAACATGGC 88
consensus_8645#3      GAAATCCAACTGAACCAGAGGCCATCGCCGCAGCGACAGCAACAAGCACAAGAACATGGC 91
consensus_8645#2      ------------------------------------------------------------
consensus_8645#0      GTGGACCATGGAAAACAAAAAAGATTTTTTTTTCTTTTTGCGGGGAAATCAATCTTTTTT 120
                                                                                  

consensus_8645#1      GGCGCCACCGC-ACCGGCGCCGGCGCCGGCGACGCCACAAGATGATGAACAGCAAGGGCA 147
consensus_8645#3      GGCGCCACCGC-ACCGGCGCCGGCGCCGGCGACGCCACAAGATGATGAACAGCAAGGGCA 150
consensus_8645#2      ------------------------------------------------------------
consensus_8645#0      AGTGTTGTTGTGATTGTCATGAGCCATGGCAAGTTAACAACGTGGGAAAGAGGAGACCAA 180
                                                                                  

consensus_8645#1      CCAAGCAGCTGTCGCCAGGCATGGCTGCGGCGGCGCGACAGCCGAACGCCACCACCAGAC 207
consensus_8645#3      CCAAGCAGCTGTCGCCAGGCATGGCTGCGGCGGCGCGACAGCCGAACGCCACCACCAGAC 210
consensus_8645#2      ------------------------------------------------------CCCGAT 6
consensus_8645#0      GCAATTAGGCAGAAAGGAACAATTAGATGATGATATTATTGTCGTCGAAGAAAATCTCTA 240
                                                                             *    

consensus_8645#1      CAAGCTCACGCTACTCCCGCTCGTCTTCTTCATCTACTTCGAGGTGGCCGGCGGCCCGTA 267
consensus_8645#3      CAAGCTCACGCTACTCCCGCTCGTCTTCTTCATCTACTTCGAGGTGGCCGGCGGCCCGTA 270
consensus_8645#2      CGGGGTCCTTTTTCTCTTTTTTTTTCTTTTTCTTTTTCTCCCAATA--CAAAAGACACTA 64
consensus_8645#0      TAAAGTCAATTCCCCTTAGAACAATATGGCAATATCTTTACAGTACTGTCAGTACAGCTA 300
                           **      *            *     * *   *                   **

consensus_8645#1      CGGCGCCGAGCAGGCCGTGAGCGCGGCGGGCCCGCTGTTCGCGC----TGCTCGGCTTCC 323
consensus_8645#3      CGGCGCCGAGCAGGCCGTGAGCGCGGCGGGCCCGCTGTTCGCGC----TGCTCGGCTTCC 326
consensus_8645#2      TAATTTTTTAAAAAGTATCAATACAAAA----TGTTTTTAATAT----TACTTAAAATAT 116
consensus_8645#0      CCTCTCCAAGAACAGTACAAAAGATTATGTGTCAGTGTCAATGACATATACTCCTGTTTA 360
                                 *       *               * *          * **     *  

consensus_8645#1      TCGCCTCCCCCTTCGCGTGGGGCG-TCCCGGTGTCGCTCGTCAC-CGCAGAGCTCGCCGC 381
consensus_8645#3      TCGCCTTCCCCTTCGCGTGGGGCG-TCCCGGTGTCGCTCGTCAC-CGCAGAGCTCGCCGC 384
consensus_8645#2      GTG--------TTCATATA------TTTAAAAAAAATTTGGCACACGAAGTAAACAGAGC 162
consensus_8645#0      GAGCTAGTCAAATCCTATAAATTAATTCATATATCTTACTGTATTATCTTAATTTGGTGT 420
                        *         **   *       *                *               * 

consensus_8645#1      CGCGCTCC--CGGGGAACGGCGGCTTCGTCGTCTGGGCCGACCGCGC----CTTCGGCCC 435
consensus_8645#3      CGCGCTCC--CGGGGAACGGCGGCTTCGTCGTCTGGGCCGACCGCGC----CTTCGGCCC 438
consensus_8645#2      CTTAATTT--CCTGGATAGTCTGCCACAACA----GGCTAGCCTTAA----CGTTGGCAC 212
consensus_8645#0      TCCATTTGGACAATGATAATGATGCCCAACATTTCTACCATTCTTCAGCTGCACAGATGA 480
                           *    *   **          *  *       *    *        *   *    

consensus_8645#1      GCTCGCCGGCTCCCTGCTCGGCACGTGGAAGTACCTCAGCTGCGTCATCAACCTCGCCGC 495
consensus_8645#3      GCTCGCCGGCTCCCTGCTCGGCACGTGGAAGTACCTCAGCTGCGTCATCAACCTCGCCGC 498
consensus_8645#2      ---TGTCAGTTTCCAGGATAACCGGCGTCTGAATCCATTCTGC--TGCTAGCCGAAGCCC 267
consensus_8645#0      AATTAATTACGCGCTGCATGTTCCATAAAAAGAATACAACAAAGAATACAACATAAATAG 540
                                   * *                *      *         * *        

consensus_8645#1      GTTCCCGGCCCTCGTCGC--CGACTACCTCGGCCGCGTCGCCCCGGCGGTCGCCGTCCCG 553
consensus_8645#3      GTTCCCGGCCCTCGTCGC--CGACTACCTCGGCCGCGTCGCCCCGGCGGTCGCCGTCCCG 556
consensus_8645#2      GTTTCTGCACGCAAACGCTTCTGCTTCCTCGGCCCACTGACAACTGCGATACATATTCCA 327
consensus_8645#0      TAGATTGTAACGACGCATAATTACCTTATACCTCTCTCTTTCTCAGAATTTAAGGCCTGA 600
                            *        *       *    *    *         * *   *          

consensus_8645#1      GGAAGCAGGGCGCGCACGGGCACGGTGCTCG-GCATGACCGTCT---TCCTCTCCTTCCT 609
consensus_8645#3      GGAAGCAGGGCGCGCACGGGCACGGTGCTCG-GCATGACCGTCT---TCCTCTCCTTCCT 612
consensus_8645#2      TGAAGTCAGGAGCACGTCACCCATATGATCGCGAATGACAATGCCAGTTCAATCATTCAT 387
consensus_8645#0      TCAAACTTGACAATAGTCTCCAAAACTAATATTTTTTTCGCATGTACTACCTCTATTTCA 660
                        **    *           *              *  *        * *     **   

consensus_8645#1      CAACTTGGGCGGCCTAAGCATTGTCGGGTGGGGCGCGGTGGCCCTGGGGTTCGTGTCGCT 669
consensus_8645#3      CAACTTGGGCGGCCTAAGCATTGTCGGGTGGGGCGCGGTGGCCCTGGGGTTCGTGTCGCT 672
consensus_8645#2      CTATTCGGCT--CTTCAGCGTT-CCATTCAATTCTCAATCTTATAAAAAAAAGAAAGGAA 444
consensus_8645#0      AAATATCTGTTGTTTTAG-ATTATTTAGTAAAGATTAATGCTTAAAAGGAAATGACCATA 719
                        *           * **  **                *                     

consensus_8645#1      GG-CGCCGTTCGTGCTGATG----ACGGCGATGGCGGCGCCGAG---GACGCGGCCGCGG 721
consensus_8645#3      GG-CGCCGTTCGTGCTGATG----ACGGCGATGGCGGCGCCGAG---GACGCGGCCGCGG 724
consensus_8645#2      AAACACCACTCTCGACAAGA----TGGGTTAGAGCATCACCAAT---GTATATGTCAAAG 497
consensus_8645#0      GCGCCCCCTATTAAATGATGTATGATGGGGAGTGTGTCGGTAGTTTAGAGTAGGATAGAG 779
                         * **          *        **  *  *   *         *     *     *

consensus_8645#1      CGG---TGGGCGGCGCGGGTGCAGGTGAAGGGGAAGAGAGACTGGAG-------GCTCTT 771
consensus_8645#3      CGG---TGGGCGGCGCGGGTGCAGGTGAAGGGGAAGAGAGACTGGAG-------GCTCTT 774
consensus_8645#2      TGA---TCCATATAGATGAGACCTATATAAATTGTTTTTCCCTATAG-------CAATCT 547
consensus_8645#0      AAAATTTTCAATTAGAGGTAACTAATGTAACAAAAGGTACTTTTAAGTGACAAAGCTTTT 839
                            *       *  *   *   *  *             *  **            *

consensus_8645#1      CTTCAACACGCTCTTC-TGGAACCTCAAC-TACTGGGACAGCGCGAGCACCATG--GCCG 827
consensus_8645#3      CTTCAACACGCTCTTC-TGGAACCTCAAC-TACTGGGACAGCGCGAGCACCATG--GCCG 830
consensus_8645#2      CCACAGTGTATATAGA-TACAAGGT-ATC-AATAGAAGAAGAGAGAGGAGTAGA--GATA 602
consensus_8645#0      TGACAAAATTTAAATCCTAAAGCGTCAATATTTTGGTACGGAGGAATTACTACACTGTCT 899
                         **            *  *   * *       *     * *  *  *  *    *   

consensus_8645#1      G-CGAGGTGGAGC----GGCCGGAGCGGACGTTCCCGCGGGCGCTCGCGGTGGCGGTGGT 882
consensus_8645#3      G-CGAGGTGGAGC----GGCCGGAGCGGACGTTCCCGCGGGCGCTCGCGGTGGCGGTGGT 885
consensus_8645#2      GATAATATAATTT----ATTCCATATGGGTAGTCC-ATATGCATATG-GGTATCTTTTGT 656
consensus_8645#0      ATAGGAACAGAGTCATAGCTATAAGAAAGTATATTCAAATGTCAATCCCGAATCCAATAA 959
                                                              *        *   *      

consensus_8645#1      GCTCATCGCCGTCAGCT---ACCTGCTGCCGCTCATGGCGGCGGTCGGCGCCACGGA-CG 938
consensus_8645#3      GCTCATCGCCGTCAGCT---ACCTGCTGCCGCTCATGGCGGCGGTCGGCGCCACGGA-CG 941
consensus_8645#2      TATTTTTTCCATATGG----ACTAGTTGC--ACAATGGTTATAGATGGCTGAATAAAATA 710
consensus_8645#0      TACCGTTGTCAACAAGTAAAATTTAATTTACATCAAACTAATTGTCAGTAAAATATTATA 1019
                           *   *          *     *       *        *   *    *       

consensus_8645#1      CGCCGCCG-----GAG---GCGTGGGAGAACGGCTACTTGGCTGACGCAGCA-GCGACGA 989
consensus_8645#3      CGCCGCCG-----GAG---GCGTGGGAGAACGGCTACTTGGCTGACGCAGCA-GGTACGT 992
consensus_8645#2      TTCTATTGCTTATGAA---CTACTTTTACACCACATTGTGGATGCCCTTACA-GCGACGA 766
consensus_8645#0      TTGTGATGAGGAGGAGTGAGTATTTTCCAAGCTTCACACAACAATCGATTTACGCGGCGC 1079
                             *     **              *               *     * *   ** 

consensus_8645#1      AGCTTGTGAGGAATCTCA--------AGGGACCAGCTACAAGTATTCCA----------- 1030
consensus_8645#3      AGTACGTGTGTACGTATA--------TACG--CTGACGCGATTA--CGA----------- 1029
consensus_8645#2      AGCTTGTGAGGAATCTCA--------AGGGACCAGCTACAAGTATTCCA----------- 807
consensus_8645#0      ATTAATTTAACGATCTCTGCATCTGCATTGCACTACTGTGGATGGTTGATCATTTTGATT 1139
                      *     *                      *  *         *     *           

consensus_8645#1      ---------CTCTACCAAAACTACAATTCACT-----GCATCATCGG-CGGGCGGTGGCT 1075
consensus_8645#3      ---------TATTGATGATGTCACAGCTTCTT-----TTATCAACAAACAAAACACACAT 1075
consensus_8645#2      ---------CTCTACCAAAACTACAATTCACT-----GCATCATCGG-CGGGCGGTGGCT 852
consensus_8645#0      GATCACTTTCTCTGCAAACGCATGAACACGTACGCAGGCATGATCGC-CGGGGGTTGGCT 1198
                                  *    *      *              ** * *   *          *

consensus_8645#1      CAAGTACTGGACGGAG-GCCGGCGCGGTGCTCTCCTCCGTCG--GGTTGTTCGAAGCGCA 1132
consensus_8645#3      GATGTCTCCGGCAGATCGCCGTACCGGTAATTGTCGCCGTTGTTTATTACTTTATGAGTT 1135
consensus_8645#2      CAAGTACTGGACGGAG-GCCGGCGCGGTGCTCTCCTCCGTCG--GGTTGTTCGAAGCGCA 909
consensus_8645#0      CAAGTACTGGATCGAG-GTGGGCGCCGTGCTCTCCACCATCGGCCTCTACTCG--GCGAC 1255
                       * **    *   **  *  *   * **  *   * ** * *     *  *    * *  

consensus_8645#1      GCTGAGCAGCGGCGCGTTCCAGCTCCTCGGCATGGCGGAGCTGGGCCTCCTCCCCTCCGT 1192
consensus_8645#3      ATTTACTCATCATATGAAAAAGAT------------------------------------ 1159
consensus_8645#2      GCTGAGCAGCGGCGCGTTCCAGCTCCTCGGCATGGCGGAGCTGGGCCTCCTCCCCTCCGT 969
consensus_8645#0      GCTGAGCAGCGCCGCGTTCCAGCTCCTCGGCATGGCGGACCTGGGCCTCCTCCCGCGCGC 1315
                        * *          *    ** *                                    

consensus_8645#1      CTTCGCCCGCCGCGGCCCCGGACGATCCGCCACCCCGTGGGTCGCCGTCGCCGCCTCCGC 1252
consensus_8645#3      ------------------------------------------------------------
consensus_8645#2      CTTCGCCCGCCGCGGCCCCGGACGATCCGCCACCCCGTGGGTCGCCGTCGCCGCCTCCGC 1029
consensus_8645#0      CTTCGCGCTCCG-GGCGCCGGT--GTTCGACACGCCCTGGGTCGGCATCCTCGCCACCGC 1372
                                                                                  

consensus_8645#1      CGCCGTCTCGGTCGCCGTCTCCTTCCTCGGCTTCGACGACGTCGTCGCCACCGCCAACCT 1312
consensus_8645#3      ------------------------------------------------------------
consensus_8645#2      CGCCGTCTCGGTCGCCGTCTCCTTCCTCGGCTTCGACGACGTCGTCGCCACCGCCAACCT 1089
consensus_8645#0      CGCCATCACCCTCGCCATGTCGTTCACCAGCTTCGACACCATCGTCGCCTCCGCCAACTT 1432
                                                                                  

consensus_8645#1      GCTCTACAGCCTCGGCGCGCTGCTCGAGTTCGCCGCCTTCCTCCGGCTCCGCGCGAGGGA 1372
consensus_8645#3      ------------------------------------------------------------
consensus_8645#2      GCTCTACAGCCTCGGCGCGCTGCTCGAGTTCGCCGCCTTCCTCCGGCTCCGCGCGAGGGA 1149
consensus_8645#0      CCTCTACAGCCTCGGCATGCTGCTCGAGTTCGCCGCCTTCGTCCGCCTCCGCGCCAG--- 1489
                                                                                  

consensus_8645#1      GGAGAGCCCCTCCTCGCTCAAGCGCCCCTACCGCGTCCCGCTGCCGC-TCCCCGCGCTCG 1431
consensus_8645#3      ------------------------------------------------------------
consensus_8645#2      GGAGAGCCCCTCCTCGCTCAAGCGCCCCTACCGCGTCCCGCTGCCGC-TCCCCGCGCTCG 1208
consensus_8645#0      ---GCTCCCCGCCATGCCCAGGC-CCTACGCCGTGCCGCTCCGGGGCCTGCCCGCCGCCG 1545
                                                                                  

consensus_8645#1      CCGCCATGTGCCTCGTGCCGTCGGCGTTCCTGGCGTACGTGGTCGCCGTCGCCGGGTGGA 1491
consensus_8645#3      ------------------------------------------------------------
consensus_8645#2      CCGCCATGTGCCTCGTGCCGTCGGCGTTCCTGGCGTACGTGGTCGCCGTCGCCGGGTGGA 1268
consensus_8645#0      CCGCCCTCTGCGCCGTCCCCTCGGCGTTCCTCGTCTTCGTCATGGCCATCGCCGGGTGGA 1605
                                                                                  

consensus_8645#1      GGGTCTCCGCCGTCGCCGCCGCGCTCACGGCCCTCGGCGTCGGCTGGCACGGCGCCATGA 1551
consensus_8645#3      ------------------------------------------------------------
consensus_8645#2      GGGTCTCCGCCGTCGCCGCCGCGCTCACGGCCCTCGGCGTCGGCTGGCACGGCGCCATGA 1328
consensus_8645#0      AGGTGTACGCCATCAGCGCCGTCTTCACCGCCGCCGGCGTCGCGGTGTACTACCTCATGG 1665
                                                                                  

consensus_8645#1      GGGTGTGCAGGTCCAGGAAGTGGCTCAGGTTCAACACCGCGGTTGCCGCCGAC-----CA 1606
consensus_8645#3      ------------------------------------------------------------
consensus_8645#2      GGGTGTGCAGGTCCAGGAAGTGGCTCAGGTTCAACACCGCGGTTGCCGCCGAC-----CA 1383
consensus_8645#0      ACCTCTGCAAGGCCAGAGGGTGGCTCACGTTCAGCGCCGCTGCCGCAGACCGCGGAGGCA 1725
                                                                                  

consensus_8645#1      TCGTCTGCAACTACAAGATGCTCCTCCTCC-------TCCTGCTGGTAGAGTC---TGAA 1656
consensus_8645#3      ------------------------------------------------------------
consensus_8645#2      TCGTCTGCAACTACAAGATGCTCCTCCTCC-------TCCTGCTGGTAGAGTC---TGAA 1433
consensus_8645#0      GCGGCGACGACGCGATGATGTACCGGCGTCAGGGGAGCACGGCGAGCGAGGTCGTCTGAT 1785
                                                                                  

consensus_8645#1      CTCTGAACCCGTTTTGGCAGAT----TTCGTCTTGCGAAAAGATGAAACACGGTAAGAAA 1712
consensus_8645#3      ------------------------------------------------------------
consensus_8645#2      CTCTGAACCCGTTTTGGCAGAT----TTCGTCTTGCGAAAAGATGAAACACGGTAAGAAA 1489
consensus_8645#0      GAGGGGATCGATCGTCGTCGACGCCATTGATTCCGGCGTTGCATTGCAAGCTGTATATGC 1845
                                                                                  

consensus_8645#1      CTCGAAATATTTGCTAGTAGAAGACTAATTACAAGCTA---TACTAGTACAAGACTAATT 1769
consensus_8645#3      ------------------------------------------------------------
consensus_8645#2      CTCGAAATATTTGCTAGTAGAAGACTAATTACAAGCTA---TACTAGTACAAGACTAATT 1546
consensus_8645#0      TTTCCGATGTTTGTTTATCTGTGTGTGTGTGCGCGCTTCTTTCCTTGTGCAGAAGAGCAT 1905
                                                                                  

consensus_8645#1      ACATGGTTGGATGAAGCTCTAAAGTTGGCGTTT-TCATATTTGTTCCTCTAATTAATCAC 1828
consensus_8645#3      ------------------------------------------------------------
consensus_8645#2      ACATGGTTGGATGAAGCTCTAAAGTTGGCGTTT-TCATATTTGTTCCTCTAATTAATCAC 1605
consensus_8645#0      AGG-AATTGAGTGATTTGTAACAGTCTTAATTAGTCGTAGATGCTGATCAAATCAAGAAA 1964
                                                                                  

consensus_8645#1      CGTGTACGATTGTGGTTCATTATCAGAGACGCG--------------------------- 1861
consensus_8645#3      ------------------------------------------------------------
consensus_8645#2      CGTGTACGATTGTGGTTCATTATCAGAGACGCG--------------------------- 1638
consensus_8645#0      TGGGTTGCATATTACTTTCNAATTAGCCAATTGTACATTCATGAAAGTGGTAGAACTAAA 2024
                                                                                  

consensus_8645#1      --------------------------------------------------
consensus_8645#3      --------------------------------------------------
consensus_8645#2      --------------------------------------------------
consensus_8645#0      GAAGCATACATAAGCTCNAAGAGAAATTNTCGACCTCACTAAAAAAAAAA 2074
                                                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)