These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8647#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1766 fasta sequence [GATCACCCCCTAACGATATGCACACATATTGGCTTGTGCCCAAGCAAATCACGCATTTCCCAAACCAAACCACCTCCACAACCCAAATCCCCCATGACATCAACCTATTGATCCTACCATTCAATGTGATCGATCTACACACTCTTGCTAATATAACTCCAATATTCCCCCTTAATTCCGTCCTCATCCATCCTAACCACCACCTTCTTATAAATTAATTAACACAAATCATACTGATCGTTCCGCACAGGAAGATAATCATCAAGATTGATCCAAGAAGGAGCGAGAGCTTAGCTTATCTGATCAGATCAAAGATGGCGGCGATCTCTCCGGCGAGCGATGGCGTGGGGCGGCGGCGGAGGAGGGTGTTGATGTTCCCGATTCCGTTTCAGGGGCATGTCACGCCGATGCTGCAGCTGGCCGACGTGCTCCGCTCCCGCGCCGGCCTCGCCGTCACCGTCTTCCACGCCCCCGTCAACGCGCCCGCCGCCGCCGAGCAGTCGGCGGCGGAGGAGGACTACCGCTTCGTGACCGTGGGGGCCGGAGTGGC-GGGGGAGGCGGCGGCGCTGATGCCCACGGGCGGCAGCGGCAGCGACTTCGCCGGCGCGCTGATGCGCCTCGACGCGCTCCTCCGGGCGCCGTTCGACGACGCCCTCCGCCAGGCGCTCCTCGCCGACGACGAGGAGGAGGCGGCGGCGACGTGCCTAGTGGTGGACTCGAACCTGCGCGGGGTGCAGGAGGTGGCGGAGCGGCGCGGCGTGCGGACGCTGGCGCTGCGCACCGGCGGCGCGTGCTGCCTCGTGGCGTACATGGCCTTCCCGGAGCTCTGCGGCAAGGGCGTCCTCCCGCCGCTGTCGCGAGATCAGCTGCAACTGGACATGCCATTGGATGAGCTTCCACCACTTCGTCTGCGAGATATGATGTTCTCAGCAACCACCACATATGGTACAATGGCTACCTGCTTAGAACGTCTATTGGACTCGGCACGGTGTTCTTCAGGTGTCATTCTCAATACCTTCGATGACCTTGAGAATTCTGACCTCCGAAAGATCGCCAATGGCCTAAGTGTTCCGGTTTACGCGATCGGTCCACTTCACAAGATCTCCATAGGCCAAGAGAGCAGCTTGCTAACTCAAGATCAAAGCTGTTTGGAATGGTTAGACAAGCAGGAGGCAGAGTCTGTTCTTTATGTGAGCTTTGGGAGCTTGGCATCTATGGACTCTCAAGAGCTTTTGGAGACAGCGTGGGGATTGGTCGATAGCGAAATTCCGTTTCTTTGGGTGATCAGGCCTAACTCGGTCCAGGGATCAGAGCAAACATGCCTTCCAGATGGCTTTGAGGAGGCGACACGTGGCAGGGGTATGGTGGTTTCCTGGGCCCCACAACAAGATGTGCTGAAGCACCGAGCGGTTGGTGGTTTTTGGACGCACAATGGGTGGAACTCAACCCTAGAAAGTATATGTGATGGTGTTCCGATGATCTGTAGGCCTCAGTTTGCGGACCAAATGATTAATGCTAGGTATGTCCAAGAGGTATGGAAGATAGGGTTCGAGCTAGAGGGAAAACTGGAGAGGAGAATGATTGAGAGGGCTGTAAGAAGGTTACTGCGCAGTGAAGAAGGCAAGGAGATGAGGCACAGGGCAAAGGATCTGAAGAACAAAGCGACGACCTGTATTGAGAAAGGAGGCTCTTCAAATACTGCAATTGATATGTTGGTGAATCTCATAATGTCATTTTGAACATTATCTTATATCAATAAACTGTTT] [+] EMBL AK107471 [GATCACCCCCTAACGATATGCACACATATTGGCTTGTGCCCAAGCAAATCACGCATTTCCCAAACCAAACCACCTCCACAACCCAAATCCCCCATGACATCAACCTATTGATCCTACCATTCAATGTGATCGATCTACACACTCTTGCTAATATAACTCCAATATTCCCCCTTAATTCCGTCCTCATCCATCCTAACCACCACCTTCTTATAAATTAATTAACACAAATCATACTGATCGTTCCGCACAGGAAGATAATCATCAAGATTGATCCAAGAAGGAGCGAGAGCTTAGCTTATCTGATCAGATCAAAGATGGCGGCGATCTCTCCGGCGAGCGATGGCGTGGGGCGGCGGCGGAGGAGGGTGTTGATGTTCCCGATTCCGTTTCAGGGGCATGTCACGCCGATGCTGCAGCTGGCCGACGTGCTCCGCTCCCGCGCCGGCCTCGCCGTCACCGTCTTCCACGCCCCCGTCAACGCGCCCGCCGCCGCCGAGCAGTCGGCGGCGGAGGAGGACTACCGCTTCGTGACCGTGGGGGCCGGAGTGGC GGGGGAGGCGGCGGCGCTGATGCCCACGGGCGGCAGCGGCAGCGACTTCGCCGGCGCGCTGATGCGCCTCGACGCGCTCCTCCGGGCGCCGTTCGACGACGCCCTCCGCCAGGCGCTCCTCGCCGACGACGAGGAGGAGGCGGCGGCGACGTGCCTAGTGGTGGACTCGAACCTGCGCGGGGTGCAGGAGGTGGCGGAGCGGCGCGGCGTGCGGACGCTGGCGCTGCGCACCGGCGGCGCGTGCTGCCTCGTGGCGTACATGGCCTTCCCGGAGCTCTGCGGCAAGGGCGTCCTCCCGCCGCTGTCGCGAGATCAGCTGCAACTGGACATGCCATTGGATGAGCTTCCACCACTTCGTCTGCGAGATATGATGTTCTCAGCAACCACCACATATGGTACAATGGCTACCTGCTTAGAACGTCTATTGGACTCGGCACGGTGTTCTTCAGGTGTCATTCTCAATACCTTCGATGACCTTGAGAATTCTGACCTCCGAAAGATCGCCAATGGCCTAAGTGTTCCGGTTTACGCGATCGGTCCACTTCACAAGATCTCCATAGGCCAAGAGAGCAGCTTGCTAACTCAAGATCAAAGCTGTTTGGAATGGTTAGACAAGCAGGAGGCAGAGTCTGTTCTTTATGTGAGCTTTGGGAGCTTGGCATCTATGGACTCTCAAGAGCTTTTGGAGACAGCGTGGGGATTGGTCGATAGCGAAATTCCGTTTCTTTGGGTGATCAGGCCTAACTCGGTCCAGGGATCAGAGCAAACATGCCTTCCAGATGGCTTTGAGGAGGCGACACGTGGCAGGGGTATGGTGGTTTCCTGGGCCCCACAACAAGATGTGCTGAAGCACCGAGCGGTTGGTGGTTTTTGGACGCACAATGGGTGGAACTCAACCCTAGAAAGTATATGTGATGGTGTTCCGATGATCTGTAGGCCTCAGTTTGCGGACCAAATGATTAATGCTAGGTATGTCCAAGAGGTATGGAAGATAGGGTTCGAGCTAGAGGGAAAACTGGAGAGGAGAATGATTGAGAGGGCTGTAAGAAGGTTACTGCGCAGTGAAGAAGGCAAGGAGATGAGGCACAGGGCAAAGGATCTGAAGAACAAAGCGACGACCTGTATTGAGAAAGGAGGCTCTTCAAATACTGCAATTGATATGTTGGTGAATCTCATAATGTCATTTTGAACATTATCTTATATCAATAAACTGTTT] [+] EMBL CB636937 [ TCCACAACCCAAATCCCCCATGACATCAACCTATTGATCCTACCATTCAATGTGATCGATCTACACACTCTTGCTAATATAACTCCAATATTCCCCCTTAATTCCGTCCTCATCCATCCTAACCACCACCTTCTTATAAATTAATTAACACAAATCATACTGATCGTTCCGCACAGGAAGATAATCATCAAGATTGATCCAAGAAGGAGCGAGAGCTTAGCTTATCTGATCAGATCAAAGATGGCGGCGATCTCTCCGGCGAGCGATGGCGTGGGGCGGCGGCGGAGGAGGGTGTTGATGTTCCCGATTCCGTTTCAGGGGCATGTCACGCCGATGCTGCAGCTGGCCGACGTGCTCCGCTCCCGCGCCGGCCTCGCCGTCACCGTCTTCCACGCCCCCGTCAACGCGCCCGCCGCCGCCGAGCAGTCGGCGGCGGAGGAGGACTACCGCTTCGTGACCGTGGGGGCCGGAGTGGCGGGGGGAGGCGGCGGCGCTGATGCCCACGGGCGGCAGCGGCAGCGACTTCGCCGGCGCGCTGATGCGCC ] [+] EMBL CB641137 [ TCCACAACCCAAATCCCCCATGACATCAACCTATTGATCCTACCATTCAATGTGATCGATCTACACACTCTTGCTAATATAACTCCAATATTCCCCCTTAATTCCGTCCTCATCCATCCTAACCACCACCTTCTTATAAATTAATTAACACAAATCATACTGATCGTTCCGCACAGGAAGATAATCATCAAGATTGATCCAAGAAGGAGCGAGAGCTTAGCTTATCTGATCAGATCAAAGATGGCGGCGATCTCTCCGGCGAGCGATGGCGTGGGGCGGCGGCGGAGGAGGGTGTTGATGTTCCCGATTCCGTTTCAGGGGCATGTCACGCCGATGCTGCAGCTGGCCGACGTGCTCCGCTCCCGCGCCGGCCTCGCCGTCACCGTCTTCCACGCCCCCGTCAACGCGCCCGCCGCCGCCGAGCAGTCGGCGGCGGAGGAGGACTACCGCTTCGTGAC ] [+] EMBL CB648768 [ TCAAGATCTTTCCAAGAAGGAGCGAGAGCTTAGCTTATCTGATCAGATCAAAGATGGCGGCGATCTCTCCGGCGAGCGATGGCGTGGGGCGGCGGCGGAGGAGGGTGTTGATGTTCCCGATTCCGTTTCAGGGGCATGTCACGCCGATGCTGCAGCTGGCCGACGTGCTCCGCTCCCGCGCCGGCCTCGCCGTCACCGTCTTCCACGCCCCCGTCAACGCGCCCGCCGCCGCCGAGCAGTCGGCGGCGGAGGAGGACTACCGCTTCGTGACCGTGGGGGCCGGAGTGGC GGGGGAGGCGGCGGCGCTGATGCCCACGGGCGGCAGCGGCAGCGACTTCGCCGGCGCGCTGATGCGCCTCGACGCGCTCCTCCGGGCGCCGTTCGACGACGCCCTCCGCCAGGCGCTCCTCGCCGACGACGAGGAGGAGGCGGCGGCGACGTGCCTAGTGGTGGACTCGAACCTGCGCGGGGTGCAGGAGGTGGCGGAGCGGCGCGGCGTGCGGACGCTGGCGCTGCGCACCGGCGGCGCGTGCTGCCTCGTGGCGTACATGGCCTTCCCGGAGCTCTGCGGCAAGGGCGTCCTCCCGCCGCTGTCGCGAGATCAGCTGCAACTGGACATGCCATTGGATGAGCTTCCACCACTTCGTCTGCGAGATATGATGTTCTCAGCAACCACCACACATGGTACAATGGCTACCTGCTTAGAACGT ] [-] EMBL CB636938 [ nAGGCAGAGTCTGTTCTTTATGTGAGCTTTGGGAGCTTGGCATCTATGGACTCTCAAGAGCTTTTGGAGACAGCGTGGGGATTGGTCGATAGCGAAATTCCGTTTCTTTGGGTGATCAGGCCTAACTCGGTCCAGGGATCAGAGCAAACATGCCTTCCAGATGGCTTTGAGGAGGCGACACGTGGCAGGGGTATGGTGGTTTCCTGGGCCCCACAACAAGATGTGCTGAAGCACCGAGCGGTTGGTGGTTTCTGGACGCACAATGGGTGGAACTCAACCCTAGAAAGTATATGTGATGGTGTTCCGATGATCTGTAGGCCTCAGTTTGCGGACCAAATGATTAATGCTAGGTATGTCCAAGAGGTATGGAAGATAGGGTTCGAGCTAGAGGGAAAACTGGAGAGGAGAATGATTGAGAGGGCTGTAAGAAGGTTACTGTGCAGTGAAGAAGGCAAGGAGATGAGGCACAGGGCAAAGGATCTGAAGAACAAAGCGACGACCTGTATTGAGAAAGGAGGCTCTTCAAATACTGCAATTGATATGTTGGTGAATCTCATAATGTCATTTTGAACATTATCTTATATCAATA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||