These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8655#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1709 fasta sequence [GTTAAGCCTGATAGGCAATCATCTTCATCGTCTTCGTCGTCGTCGTCGGAGGAGGAGAAGGAGGTGTCCAAGGACGTCGCGGTAGAGACCAGCGTCGTCGTCCCGTCGGTGGTCGCCGCCTCGCCGGACGATGAGGCCGCCGCCGTCGCTTCCGGTGACGGCGGGGACGTTATCAAACACGACGATGAGGCCGTGGTCAGACCGGACGATTGGGCATCGTGGCCGCAGCAGCCGGCTCAGACCGTCGACGACGTAGCGGCGGCGGCGACGACGACGCCGCAGGCGGCGCCGGAGATCCAGACGATGTCGCTGCAGCCGGCGGCGGTGGCGGGGTTCGATCCGGAGAGGATCCCCAAGTCCATCTTCCAGGCGAAGCCCCCGGGGTCGTCGTCGCAGGCGGAGTGGAGCGTGGCGTCGAACGAGTCGCTGTTCAGCATCCACCACGGCGCCCGGCCGTCCGGCGACCTCTGCGGCTTCTACGCCGGCGAGAGCAGGTCGCATTTCGACTACTTCTACGACGAGGCCATGGCCGGCGCCGCCGGCGACCACACGTCGGACTGGAAGCTGGCCACCGTCGCCGAAGGGTCGCCTGGTGGCAGCGCGCGGTCGGACGCCACCGACGGCGGCGGCGGCGCGGCCAAGCAAAAGGCGGCCATCGACTTCCGCCGCCACGAGAGCGGCTCCGCCGGCAGC-TCGAGCAACTTCTCC-TTCGCCTTCCCCATATTGGCGGAGACGACGACGTCGCCGAGGAAGAGGGACTACGGCGGGATGTACCATCCGCTGAAGAAGGAGGCGGAGCAGCAGCAGGCGGCGTCGCCGGCGTCGGCGTTCGAGGAGATGACGCCGGAGGAGGAG-CGGCGGCGGCGGCGGAGCTGGTGGTGCTGCTGCTGCGGCGAGTGCTGCGGCTGCTGCTGGTTCGCCTGCTCGTGGTCGTCGTGCTGCTGCTGCTGCCGGTGGCGGTGGTGCAGCCGCTGCAGCTGCAGCTGCCCAACCTTCTGCCGCCGCAACTAGTGCCTCTCTGCTCCTGACCAAGACATTTTTGGCGGGAAAAGATGAAGGGAAAAAACCGAGACCAACTCGGCTAATCCTGATACAGCCATAGTTAAATTAATTATTGCTACCAGATTAGGCATCACTGCATGAGAGGATCATATCATATGTATGCATGTGCAGATGGGTAAAAAGATGAAGATGATATTGTTCACTGTTGACAAGGAAATGTTATGCTAACCTGCAGATGGGCTGAGGGATTAGTTCCAGGTACCCCACTGCCATCTGATCCCCGGATACCTTAGCGTCCAAACTGATGTCGCGGCTTGGCGGATATCATCGCTGGAGTCGGCATGGAAAAGAATGGTCACCTCGCAAGATGGAGCACAGTTATTAAACAAGGGTGCAAGATGAGGAACATCCTTCAATGGCGGTAGATGAAACAGGAGTCTCCTCAAACAGCTTCTAAACTGGTTGCTGGTGCATAACATCAGGCAATGCGTCATTTCACATGAAAACCGAGGGGCCAACTTGACTTCGCTGATGCCGGCAAACAGCTGAAGAAGATACTCGGGCTTCACTGCTTCAAAAAGTTCATATTTGTTTGTAGAAGTGGGCAGCTCAAGCTCTAATGTAGTGATATCATGATTCTCTGCAAATACTTGCAAGAGGGACTTTAGATCCAATGACTCTAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK107005 [GTTAAGCCTGATAGGCAATCATCTTCATCGTCTTCGTCGTCGTCGTCGGAGGAGGAGAAGGAGGTGTCCAAGGACGTCGCGGTAGAGACCAGCGTCGTCGTCCCGTCGGTGGTCGCCGCCTCGCCGGACGATGAGGCCGCCGCCGTCGCTTCCGGTGACGGCGGGGACGTTATCAAACACGACGATGAGGCCGTGGTCAGACCGGACGATTGGGCATCGTGGCCGCAGCAGCCGGCTCAGACCGTCGACGACGTAGCGGCGGCGGCGACGACGACGCCGCAGGCGGCGCCGGAGATCCAGACGATGTCGCTGCAGCCGGCGGCGGTGGCGGGGTTCGATCCGGAGAGGATCTCCAAGTCCATCTTCCAGGCGAAGCCCCCGGGGTCGTCGTCGCAGGCGGAGTGGAGCGTGGCGTCGAACGAGTCGCTGTTCAGCATCCACCACGGCGCCCGGCCGTCCGGCGACCTCTGCGGCTTCTACGCCGGCGAGAGCAGGTCGCATTTCGACTACTTCTACGACGAGGCCATGGCCGGCGCCGCCGGCGACCACACGTCGGACTGGAAGCTGGCCACCGTCGCCGAAGGGTCGCCTGGTGGCAGCGCGCGGTCGGACGCCACCGACGGCGGCGGCGGCGCGGCCAAGCAAAAGGCGGCCATCGACTTCCGCCGCCACGAGAGCGGCTCCGCCGGCAGC TCGAGCAACTTCTCC TTCGCCTTCCCCATATTGGCGGAGACGACGACGTCGCCGAGGAAGAGGGACTACGGCGGGATGTACCATCCGCTGAAGAAGGAGGCGGAGCAGCAGCAGGCGGCGTCGCCGGCGTCGGCGTTCGAGGAGATGACGCCGGAGGAGGAG CGGCGGCGGCGGCGGAGCTGGTGGTGCTGCTGCTGCGGCGAGTGCTGCGGCTGCTGCTGGTTCGCCTGCTCGTGGTCGTCGTGCTGCTGCTGCTGCCGGTGGCGGTGGTGCAGCCGCTGCAGCTGCAGCTGCCCAACCTTCTGCCGCCGCAACTAGTGCCTCTCTGCTCCTGACCAAGACATTTTTGGCGGGAAAAGATGAAGGGAAAAAACCGAGACCAACTCGGCTAATCCTGATACAGCCATAGTTAAATTAATTATTGCTACCAGATTAGGCATCACTGCATGAGAGGATCATATCATATGTATGCATGTGCAGATGGGTAAAAAGATGAAGATGATATTGTTCACTGTTGACAAGGAAATGTTATGCTAACCTGCAGATGGGCTGAGGGATTAGTTCCAGGTACCCCACTGCCATCTGATCCCCGGATACCTTAGCGTCCAAACTGATGTCGCGGCTTGGCGGATATCATCGCTGGAGTCGGCATGGAAAAGAATGGTCACCTCGCAAGATGGAGCACAGTTATTAAACAAGGGTGCAAGATGAGGAACATCCTTCAATGGCGGTAGATGAAACAGGAGTCTCCTCAAACAGCTTCTAAACTGGTTGCTGGTGCATAACATCAGGCAATGCGTCATTTCACATGAAAACCGAGGGGCCAACTTGACTTCGCTGATGCCGGCAAACAGCTGAAGAAGATACTCGGGCTTCACTGCTTCAAAAAGTTCATATTTGTTTGTAGAAGTGGGCAGCTCAAGCTCTAATGTAGTGATATCATGATTCTCTGCAAATACTTGCAAGAGGGACTTTAGATCCAATGACTCTAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK069948 [GTTAAGCCTGATAGGCAATCATCTTCATCGTCTTCGTCGTCGTCGTCGGAGGAGGAGAAGGAGGTGTCCAAGGACGTCGCGGTAGAGACCAGCGTCGTCGTCCCGTCGGTGGTCGCCGCCTCGCCGGACGATGAGGCCGCCGCCGTCGCTTCCGGTGACGGCGGGGACGTTATCAAACACGACGATGAGGCCGTGGTCAGACCGGACGATTGGGCATCGTGGCCGCAGCAGCCGGCTCAGACCGTCGACGACGTAGCGGCGGCGGCGACGACGACGCCGCAGGCGGCGCCGGAGATCCAGACGATGTCGCTGCAGCCGGCGGCGGTGGCGGGGTTCGATCCGGAGAGGATCCCCAAGTCCATCTTCCAGGCGAAGCCCCCGGGGTCGTCGTCGCAGGCGGAGTGGAGCGTGGCGTCGAACGAGTCGCTGTTCAGCATCCACCACGGCGCCCGGCCGTCCGGCGACCTCTGCGGCTTCTACGCCGGCGAGAGCAGGTCGCATTTCGACTACTTCTACGACGAGGCCATGGCCGGCGCCGCCGGCGACCACACGTCGGACTGGAAGCTGGCCACCGTCGCCGAAGGGTCGCCTGGTGGCAGCGCGCGGTCGGACGCCACCGACGGCGGCGGCGGCGCGGCCAAGCAAAAGGCGGCCATCGACTTCCGCCGCCACGAGAGCGGCTCCGCCGGCAGC TCGAGCAACTTCTCC TTCGCCTTCCCCATATTGGCGGAGACGACGACGTCGCAGAGGAAGAGGGACTACGGCGGGATGTACCATCCGCTGAAGAAGGAGGCGGAGCAGCAGCAGGCGGCGTCGCCGGCGTCGGCGTTCGAGGAGATGACGCCGGAGGAGGAG CGGCGGCGGCGGCGGAGCTGGTGGTGCTGCTGCTGCGGCGAGTGCTGCGGCTGCTGCTGGTTCGCCTGCTCGTGGTCGTCGTGCTGCTGCTGCTGCCGGTGGCGGTGGTGCAGCCGCTGCAGCTGCAGCTGCCCAACCTTCTGCCGCCGCAACTAGTGCCTCTCTGCTCCTGACCAAGACATTTTTGGCGGGAAAAGATGAAGGGAAAAAACCGAGACCAACTCGGCTAATCCTGATACAGCCATAGTTAAATTAATTATTGCTACCAGATTAGGCATCACTGCATGAGAGGATCATATCATATGTATGCATGTGCAGATGGGTAAAAAGATGAAGATGATATTGTTCACTGTTGACAAGGAAATGTTATGCTAACCTGCAGAT ] [+] EMBL AK099271 [GTTAAGCCTGATAGGCAATCATCTTCATCGTCTTCGTCGTCGTCGTCGGAGGAGGAGAAGGAGGTGTCCAAGGACGTCGCGGTAGAGACCAGCGTCGTCGTCCCGTCGGTGGTCGCCGCCTCGCCGGACGATGAGGCCGCCGCCGTCGCTTCCGGTGACGGCGGGGACGTTATCAAACACGACGATGAGGCCGTGGTCAGACCGGACGATTGGGCATCGTGGCCGCAGCAGCCGGCTCAGACCGTCGACGACGTAGCGGCGGCGGCGACGACGACGCCGCAGGCGGCGCCGGAGATCCAGACGATGTCGCTGCAGCCGGCGGCGGTGGCGGGGTTCGATCCGGAGAGGATCCCCAAGTCCATCTTCCAGGCGAAGCCCCCGGGGTCGTCGTCGCAGGCGGAGTGGAGCGTGGCGTCGAACGAGTCGCTGTTCAGCATCCACCACGGCGCCCGGCCGTCCGGCGACCTCTGCGGCTTCTACGCCGGCGAGAGCAGGTCGCATTTCGACTACTTCTACGACGAGGCCATGGCCGGCGCCGCCGGCGACCACACGTCGGACTGGAAGCTGGCCACCGTCGCCGAAGGGTCGCCTGGTGGCAGCGCGCGGTCGGACGCCACCGACGGCGGCGGCGGCGCGGCCAAGCAAAAGGCGGCCATCGACTTCCGCCGCCACGAGAGCGGCTCCGCCGGCAGC TCGAGCAACTTCTCC TTCGCCTTCCCCATATTGGCGGAGACGACGACGTCGCCGAGGAAGAGGGACTACGGCGGGATGTACCATCCGCTGAAGAAGGAGGCGGAGCAGCAGCAGGCGGCGTCGCCGGCGTCGGCGTTCGAGGAGATGACGCCGGAGGAGGAG CGGCGGCGGCGGCGGAGCTGGTGGTGCTGCTGCTGCGGCGAGTGCTGCGGCTGCTGCTGGTTCGCCTGCTCGTGGTCGTCGTGCTGCTGCTGCTGCCGGTGGCGGTGGTGCAGCCGCTGCAGCTGCAGCTGCCCAACCTTCTGCCGCCGCAACTAGTGCCTCTCTGCTCCTGACCAAGACATTTTTGGCGGGAAAAGATGAAGGGAAAAAACCGAGACCAACTCGGCTAATCCTGATACAGCCATAGTTAAATTAATTATTGCTACCAGATTAGGCATCACTGCATGAGAGGATCATATCATATGTATGCATGTGCAGATGGGTAAAAAGATGAAGATGATATTGTTCACT ] [+] EMBL BP184496 [ ccGAGAGGATCCCCAAGTCCATCTTCCAGGCGAAGCCCCCGGGGTCGTCGTCGCAGGCGGAGTGGAGCGTGGCGTCGAACGAGTCGCTGTTCAGCATCCACCACGGCGCCCGGCCGTCCGGCGACCTCTGCGGCTTCTACGCCGGCGAGAGCAGGTCGCATTTCGACTACTTCTACGACGAGGCCATGGCCGGCGCCGCCGGCGACCACACGTCGGACTGGAAGCTGGCCACCGTCGCCGAAGGGTCGCCTGGTGGCAGCGCGCGGTCGGACGCCACCGACGGCGGCGGCGGCGCGGCCAAGCAAAAGGCGGCCATCGACTTCCGCCGCCACGAGAGCGGCTCCGCCGGCAGC TCGAGCAACTTCTCC TTCGCCTTCCCCATATTGGCGGAGACGACGACGTCGCCGAGGAAGAGGGACTACGGCGGGATGTACCATCCGCTGAAGAAGGAGGCGGAGCAGCAGCAGGCGGCGTCGCCGGCGTCGGCGTTCGAGGAGATGACGCCGGAGGAGGAGCCGGCGGCGGCGGCGGAGCTGGTGGTGCTGCTGCTGCGGCGAGTGCTGCGGCTGCTGCTGGTTCGCCTGCTCGTGGTCGTCGTGCTGCTGCTGCTGCCGGTGGC ] [+] EMBL BP184473 [ ccGAGAGGATCCCCAAGTCCATCTTCCAGGCGAAGCCCCCGGGGTCGTCGTCGCAGGCGGAGTGGAGCGTGGCGTCGAACGAGTCGCTGTTCAGCATCCACCACGGCGCCCGGCCGTCCGGCGACCTCTGCGGCTTCTACGCCGGCGAGAGCAGGTCGCATTTCGACTACTTCTACGACGAGGCCATGGCCGGCGCCGCCGGCGACCACACGTCGGACTGGAAGCTGGCCACCGTCGCCGAAGGGTCGCCTGGTGGCAGCGCGCGGTCGGACGCCACCGACGGCGGCGGCGGCGCGGCCAAGCAAAAGGCGGCCATCGACTTCCGCCGCCACGAGAGCGGCTCCGCCGGCAGCTTCGAGCAACTTCTCCTTTCGCCTTCCCCATATTGGCGGAGACGACGACGTCGCCGAGGAAGAGGGACTACGGC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||