These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8685#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 891 fasta sequence [CTGTAGAATAATTCTCCATCGCAAGAATTAAACAATTGCAACGAGAAGATTCCCATAGAGCTAGCATTAGTTTTTCCAATGCTGGCCTGCCTTAGTCTCTGACAGACAGTTCATTCTCTTGTGTATCATATCCATTCTCTGCATTCTTGCAGCTATATATAAACACACCATCATCCAGCTCTAGCTACACACTGCTACTGCTGCATATTGCTAGGCACAAATTCAGAGAGAGAGACAGGTCGAGCTAGAAAGAATCACACATGGAGAACAACACATCTCATTACTCTTCTTGCATTAGCCCAGCAGCTGAGACGTCGTCCATGTCAGCT-GGAGAGAGCAGCTGGGCGATGCACATTGC-GAACTTCTTGGCATCACCGTACAACAGCCAGGAGATGTGCCAGGAA-CCAGTGATCTCTGGCAGCAGCAGCTTCTCCTCTGGCTTCTCTTCT-TCGTTTGCTACTTCCTATGACGACGCATCGTTCATCACGTCGGAGATGATGTG-TGACGACGACGATGACGATGATTCCTTGCAGGACACTGCCTGTTCTTCTGCAGCTGCCCCTAAGTTAACTAGCAACTTGAACAATGTTGATATGAAGTCAATGGCAACAATGGAGGCTAAAGATATCAACATCACACAGCTGGCCAAGTATTTTGTCGATGCCAGTTCACGACAGCCGGCGGCTGAAGTGCTTCAAGAAACAGTCAGTGTTGATAACAACAACGACAAGTCCTTGTATGAATGTAATGAGCTGAGGAAGAAAGGGCTCTGCTTGGTCCCTCTCTCCATGTTGATAAATTACCTCGGATGATTGATTGTACTGTTAATGTGTACTGTCAGTATTCAGTTTAATTAATCGTATACAACGATAGTG-NTCATATATCAAAAAA] [+] EMBL CF296850 [CTGTAGAATAATTCTCCATCGCAAGAATTAAACAATTGCAACGAGAAGATTCCCATAGAGCTAGCATTAGTTTTTCCAATGCTGGCCTGCCTTAGTCTCTGACAGACAGTTCATTCTCTTGTGTATCATATCCATTCTCTGCATTCTTGCAGCTATATATAAACACACCATCATCCAGCTCTAGCTACACACTGCTACTGCTGCATATTGCTAGGCACAAATTCAGAGAGAGAGACAGGTCGAGCTAGAAAGAATCACACATGGAGAACAACACATCTCATTACTCTTCTTGCATTAGCCCAGCAGCTGAGACGTCGTCCATGTCAGCT GGAGAGAGCAGCTGGGCGATGCACATTGC GAACTTCTTGGCATCACCGTACGACAGCCAGGAGATGTGCCAGGAACCCAGTGATCTCTGGCAGCAGCAGCTTCTCCTCTGGCTTCTCTTCTNTCGTTTGCTACTTCCTATGACGACGCATCGTTCATCACGTCGGAGATGATGTG TGACGACGACGATGACGATGATTCCTTGCAGGACACTGCCTGTTCTTCTGCAGCTGCCCCTAAGTTAACTAGCAACT ] [+] EMBL AU032094 [ TGCTAGGCACAAATTCAGAGAGAGAGACAGGTCGAGCTAGAAAGAATCACACATGGAGAACANCACATCTCATTACTCTTCTTGCATTAGCCCAGCAGCTGAGACGTCGTCCATGTCAGCT GGAGAGAGCAGCTGGGCGATGCACATTGC GAACTTCTTGGCATCACCGTACANCAGCCAGGAGATGTGCCAGGAA CCAGTGATCTCTGGCAGCAGCAGCTTCTCCTCTGGCTTCTCTTCT TCGTTTGCTACTTCCTATGACGACGCATCGTTCATCACGTCGGAGATGATGTGTTGACGACGACGATGACGATGATTCCTTGCAGGACACTNCCTGTTCTTCTTCA CTTNCCCTAAGTTACTTAGC ACTTGACCAATGTTGATA ] [+] EMBL AU095514 [ CTGAGACGTCGTCCATGTCAGCTGGGAGAGAGCAGCTGGGCGATGCACATTGCGGAACTTCTTGGCATCACCGTACAACAGCCAGGAGATGTGCCAGGAA CCAGTGATCTCTGGCAGCAGCAGCTTCTCNTCTGGCTTCTCTTCT TCGTTTGCTACTTCCTATGACGACGCATCGTTCATCACGTCGGAGATGATGTG TGACGACGACGATGACGATGATTCCTTGCAGGACACTGCCTGTTCTTCTGCAGCTGCCCCTAAGTTAACTAGCAACTTGAACAATGTTGATATGAAGTCAATGGCAACAATGGAGGCTAAAGATATCAACATCACACAGCTGGCCAAGTATTTTGTCGATGCCAGTTCACGACAGCCGGCGGCTGAAGTGCTTCAAGAAACAGTCAGTGTTGATAACAACAACGACAAGTCCTTGTATGAATGTAATGAGCTGAGGAAGAAAGGGCTCTGCTTGGTCCCTCTCTCCATGTTGATAAATTACCTCGGATGATTGATTGTACTGTTAATGTGTACTGTCAGTATTCAGTTTAATTAATCGTATACAACGGNNGTG NNCATATATCAAAAA ] [-] EMBL CF296849 [ CTTCTCCTCTGGCTTCTCTTCT TCGTTTGCTACTTCCTATGACGACGCATCGTTCATCACGTCGGAGATGATGTG TGACGACGACGATGACGATGATTCCTTGCAGGACACTGCCTGTTCTTCTGCAGCTGCCCTTAAGTTAACTAGCAACTTGAACAATGTTGATATGAAGTCAATGGCAACAATGGAGGCTAAAGATATCAACATCACACAGCTGGCCAAGTATTTTGTCGATGCCAGTTCACGACAGCCGGCGGCTGAAGTGCTTCAAGAAACAGTCAGTGTTGATAACAACAACGACAAGTCCTTGTATGAATGTAATGAGCTGAGGAAGAAAGGGCTCTGCTTGGTCCCTCTCTCCATGTTGATAAATTACCTCGGATGATTGATTGTACTGTTAATGTGTACTGTCAGTATTCAGTTTAATTAATCGTATACAACGATAGTG TTCATATATCAAAAAA] [+] EMBL AU162516 [ AACATCACACAGCTGGCCAAGTATTTTGTCGATGCCAGTTCACGACAGCCGGCGGCTANAGTGCTTCAAGAAACAGTCAGTGTTGATAACAACAACGACAAGTCCTTGTATGAATGTAATGAGCTGAGGAAGAAAGGGCTCTGCTTGGTCCCTCTCTCCATGTTGATAAATTACCTCGGATGATTGATTGTACTGTTAATGTGTACTGTCAGTATTCAGTTTAATTAATCGTATACAACGATAGTGTNTCATATATCAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||