These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8687#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1317 fasta sequence [GAGGGGGAAGCTGTTTAGCCATGGCCTCCGTCTCCATCTCCTACCTCGGGCCCTGAGCACATCCCCATTCCCCTAGCCTCAGCTCCTCCATGCGAGGGCGGTGATGGCGCCCGCCTCCGTCGCCGTCTCCCTCTCCTTCCGCGTCGTCCCGCCTCGGCCCTGCCGCCGGCGGGCGAGGTGGCCCCGGCCAATTAGGGCTTCGAGCGACGGTAGTGGCGTCGCAAACGGGGACCGGAAGGTCGGGGCTCTGGAGAGGAGGGTGGGAGATCTGAGGGCTGTCGTCGCCTCGGTGCCCCCTGCTGTTGCTGCGATCAAGAAAAACATTGGACTAAACTTTATTGCTGGATTCTGTCTCGGCATCACACTTTTGGCTGCTGTTGCAAGACAGGTCATCATTAGGATTCATGAGCGTGACAATAAAGGCTCTGTTGCTGACCTAATAAGGCGTGGACAATTAAAATCAGGACAACGTGGGATAGCAAAACCCCGAGTGTACGATGATCCTTTCAATAATCCATTAGTCAAGATTGATGAGGATACTTCTACCGCTCAAGTGTTTGGCAAGGAGTACCGGCTTGCTCCCATTAGGCTTACAAAAGAACAACAAGCAATGCATCAGAAAAGGAGATCACGTACGTATCAGTGGAAAAGGCCCACTGTTTTTCTTAAAGAAGGTGATTCCTTGCCACCAGATGTTGATCCAGATACAGTTAGATGGATTCCCGTAAACCACCCATTTGCTGCTGCTTCAACTGAAGTGGATGAGGAGACTGCTAAACAAAATGTTTATCAAAAGGATGGGGTCCCATCCCGTGTCAAAGCTGAGCATGAAGCTTTGCAGACAAGGCTAGAGGCTTCAAATAATGTTAACAAGTTCTCTTCTAGCCAAAGGAATATGCAGCTTAGTGACAGGCAACTAAGATTATCATCAAACGAGTCATCTGGGAGTCGGCAAAACTCGTTATCTGGCACAGTGAAGAACCAAAATGGTCAACCAACCTTGGAGTCTGAAAAGCGTAGCCCT-GACAACAACTCACAATCAAAAAGTCTGGAAGAACAATAAATTTGTGATTTGTGTCAACTCCTTAGCACCT-GCTTCAACAGCTTGTCAGCTTCGTTGTGTAGTGTACTGAGGACTCAGGTTTTAGCTGTAGATAGAAGAATTTTGGACCTGTAGGCTTACGTAGTGACTTGAGCATAGGGCATTGCTACGGAATGTATTTCGTATGTTGTAAAGGGATGGGCATGAGCATAGGGCATTGCTACGGAATGTATTTCGTATGTTGTAAAGGGATATTTTCTTTCTCAAAAATTCCA] [+] EMBL AK102928 [GAGGGGGAAGCTGTTTAGCCATGGCCTCCGTCTCCATCTCCTACCTCGGGCCCTGAGCACATCCCCATTCCCCTAGCCTCAGCTCCTCCATGCGAGGGCGGTGATGGCGCCCGCCTCCGTCGCCGTCTCCCTCTCCTTCCGCGTCGTCCCGCCTCGGCCCTGCCGCCGGCGGGCGAGGTGGCCCCGGCCAATTAGGGCTTCGAGCGACGGTAGTGGCGTCGCAAACGGGGACCGGAAGGTCGGGGCTCTGGAGAGGAGGGTGGGAGATCTGAGGGCTGTCGTCGCCTCGGTGCCCCCTGCTGTTGCTGCGATCAAGAAAAACATTGGACTAAACTTTATTGCTGGATTCTGTCTCGGCATCACACTTTTGGCTGCTGTTGCAAGACAGGTCATCATTAGGATTCATGAGCGTGACAATAAAGGCTCTGTTGCTGACCTAATAAGGCGTGGACAATTAAAATCAGGACAACGTGGGATAGCAAAACCCCGAGTGTACGATGATCCTTTCAATAATCCATTAGTCAAGATTGATGAGGATACTTCTACCGCTCAAGTGTTTGGCAAGGAGTACCGGCTTGCTCCCATTAGGCTTACAAAAGAACAACAAGCAATGCATCAGAAAAGGAGATCACGTACGTATCAGTGGAAAAGGCCCACTGTTTTTCTTAAAGAAGGTGATTCCTTGCCACCAGATGTTGATCCAGATACAGTTAGATGGATTCCCGTAAACCACCCATTTGCTGCTGCTTCAACTGAAGTGGATGAGGAGACTGCTAAACAAAATGTTTATCAAAAGGATGGGGTCCCATCCCGTGTCAAAGCTGAGCATGAAGCTTTGCAGACAAGGCTAGAGGCTTCAAATAATGTTAACAAGTTCTCTTCTAGCCAAAGGAATATGCAGCTTAGTGACAGGCAACTAAGATTATCATCAAACGAGTCATCTGGGAGTCGGCAAAACTCGTTATCTGGCACAGTGAAGAACCAAAATGGTCAACCAACCTTGGAGTCTGAAAAGCGTAGCCCT GACAACAACTCACAATCAAAAAGTCTGGAAGAACAATAAATTTGTGATTTGTGTCAACTCCTTAGCACCT GCTTCAACAGCTTGTCAGCTTCGTTGTGTAGTGTACTGAGGACTCAGGTTTTAGCTGTTGATAGAAGAATTTTGGACCTGTAGGCTTACGTAGTGACTTGAGCATAGGGCATTGCTACGGAATGTATTTCGTATGTTGTAAAGGGATGGGCATGAGCATAGGGCATTGCTACGGAATGTATTTCGTATGTTGTAAAGGGATATT ] [+] EMBL CB680470 [ AGCTCCTCCTTGCGAGGGCGGTGATGGCGCCCGCCTCCGTCGCCGTCTCCCTCTCCTTCCGCGTCGTCCCGCCTCGGCCCTGCCGCCGGCGGGCGAGGTGGCCCCGGCCAATTAGGGCTTCGAGCGACGGTAGTGGCGTCGCAAACGGGGACCGGAAGGTCGGGGCTCTGGAGAGGAGGGTGGGAGATCTGAGGGCTGTCGTCGCCTCGGTGCCCCCTGCTGTTGCTGCGATCAAGAAAAACATTGGACTAAACTTTATTGCTGGATTCTGTCTCGGCATCACACTTTTGGCTGCTGTTGCAAGACAGGTCATCATTAGGATTCATGAGCGTGACAATAAAGGCTCTGTTGCTGACCTAATAAGGCGTGGACAATTAAAATCAGGACAACGTGGGATAGCAAAACCCCGAGTGTACGATGATCCTTTCAATAATCCATTAGTCAAGATTGATGAGGATACTTCTACCGCTCAAGTGTTTGGCAAGGAGTACCGGCTTGCTCCCATTAGGCTTACAAAAGAACAACAAGCAATGCATCAGAAAAGGAGATCACGTACGTATCAGTGGAAAAGGCCCACTGTTTTTCTTAAAGAAGGTGATTCCTTGCCACCAGATGTTGATCCAGATACAGTTAGATGGATTCCCGTAAACCACCCATTTGCTGCTGCTTCAACTGAAGTGGATGAGGAGACTGCTAAACAAAATGTTTATCAAAAGGATGGGGTCCCATCCCGTGTCAAAGCTGAGCAT ] [+] EMBL AU056027 [ ATCAGTGGAAAAGGCCCACTGTTTTTCTTANAGAAGGTGATTCCTTGCCACCAGATGTTGATCCAGATACAGTTAGATGGATTCCCGTAAACCACCCATTTGCTGCTGCTTCAACTGAAGTGGATGAGGAGACTGCTAAACAAAATGTTTNTCAAAAGGATGGGGTCCCATCCCGTGTCAAAGCTGAGCATGAAGCTTTGCAGACAAGGCTAGAGGCTTCAAATAATGTTAACAAGTTCTCTTCTAGCCAAAGGAATATGCAGCTTNGTGACAGGCAACTAAGATTATCATCAAACGAGTCATCTGGGAGTCGGCAAAACTCGTTATCTGGCACAGTGAAGAACCAAAATGGTCAACCAACCTTGGAGTCTGAAAAGCGTAGCCCT GACAACAACTCACAATCAAAAAGTCTGGAAGAACAATAAATTTGTGATTTGTGTCAACTCCTTAGCACCT GCTTCAACAGCTTGTCAGCTTCGTTGTGTAGTGTACTGAGGACTCAGGTTTTAGCTGTAGATAGAAGAATTTTGGACCTGTAGGCTTACGTAGTGACTTGAGCATAGGGCATTGCTACGGAATGTATTTCGTATGTTGTAAAGGGATGGGCATGAGCATAGGGCATTGCTACGGAATGTATTTCGTATGTTGTAAAGGGATATTTTCTTTCTCAAAAA ] [+] EMBL AU056026 [ ATCAGTGGAAAAGGCCCACTGTTTTTCTTAAAGAAGGTGATTCCTTGCCACCAGATGTTGATCCAGATACAGTTAGATGGATTCCCGTAAACCACCCATTTGCTGCTGCTTCAACTGAAGTGGATGAGGAGACTGCTAAACAAAATGTTTATCAAAAGGATGGGGTCCCATCCCGTGTCAAAGCTGAGCATGAAGCTTTGCAGACAAGGCTAGAGGCTTCAAATAATGTTAACAAGTTCTCTTCTAGCCAAAGGAATATGCAGCTTAGTGACAGGCAACTAAGATTATCATCAAACGAGTCATCTGGGAGTCGGCAAAACTCGTTATCTGGCACAGTGAAGAACCAAAATGGTCAACCAACCTTGGAGTCTGAAAAGCGTA CCCTGGACAACAACTCACAATCAAAAAGTCTGGAAGAACAATAAATTTGTGATTTGTGTCAACTCCTTAGCACCTGGCTTCAACAGCTTGTCAGCT ] [+] EMBL AK058633 [ ATGAAGCTTTGCAGACAAGGCTAGAGGCTTCAAATAATGTTAACAAGTTCTCTTCTAGCCAAAGGAATATGCAGCTTAGTGACAGGCAACTAAGATTATCATCAAACGAGTCATCTGGGAGTCGGCAAAACTCGTTATCTGGCACAGTGAAGAACCAAAATGGTCAACCAACCTTGGAGTCTGAAAAGCGTAGCCCT GACAACAACTCACAATCAAAAAGTCTGGAAGAACAATAAATTTGTGATTTGTGTCAACTCCTTAGCACCT GCTTCAACAGCTTGTCAGCTTCGTTGTGTAGTGTACTGAGGACTCAGGTTTTAGCTGTAGATAGAAGAATTTTGGACCTGTAGGCTTACGTAGTGACTTGAGCATAGGGCATTGCTACGGAATGTATTTCGTATGTTGTAAAGGGATGGGCATGAGCATAGGGCATTGCTACGGAATGTATTTCGTATGTTGTAAAGGGATATTTTCTTTCTCAAGTTTTCCA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||