cluster # 8753

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Oryza sativa
cluster # 8753 cluster # 8753 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8753#0 length = 2083 sequences # 5
consensusID : consensus_8753#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2083
fasta sequence
                              [TCCCGCCATTGCTCCGCTCCCCAATCTCCCCAACGAGAGAGAGAGAGAGCGAGGAGAGGGAGAGGGAGGATGGTGGGGCCGCAGTACGACCTCGTCGGGAACCCCCTGGGGGCGGTGCGCTCCACCTTCGAGAGGGCGGCGGCGGAGTCCGGTGGGCACGAGCCGGTGGCGGCGTTCCGGGGGAAAGACTGGGGCGCCACCGAGGTGTTCCGCTCCTTTCTCTTCGAGCAAGGCGGGCTTGACAAGGTTCCGGTGTTGGATGAATCAAATCTTGGATTGATCAAGCCGAATACCCTTGTTCGGTTCCGGGGGATGGTTCAGGACATGCTCGGGAACGAGTTCTATGTTGGTGCTTTCAAGGATGGCTCCACTTGGAGGACAAACAAATTCTCCGATTCCTCGCCGTTCTCAATGCCACACCCTTGTGATTCACATCTCTGGGAGCGCCATCTTTTCCACTGTGTGCCTGTGCCTGGACAAAATTCTTGGACACGCGAGTCGTCCCCTGGCCCTGACTTGCGCAGAATAGCAAGCTGCTTCACATCTGAACAAAGGGAGAAAAGGAAGAGGGGTGCAGATAATGACGCCATGGATGTTTCAGAAAGTGGTAGTGGAGAGACTTCTTCATCCAGCAAGAAGACGAAGGATGATGGTGTCAAGATCTCAAATAGTTCAGTAGAAATGTCAATGAATGAAGAACATCATGTCCCAGAGATGAATGGGGGAGATCATCATATTCCTGGAAGCTCCTTTTCCTGCCTAGTGAAGGTGTATGATATGCCTGAAAGTCAGGTGAAACTGAACGATGTTTCTGAGTTCATAGGTGTATATACATTTGACCCTGAACTTGCTGCTCCTAACGATAATTCGGATGATATAATGTTTGACCTTATGGAAGATGTAACCGCTCAGCTGCCTCCCAGTAAGGTTCCCCGTCTTCACTGCTTGGTATGGAGAAACTTATCTGCTCATGATTTTCTACCAAGGCCTCCTGCGGTTGAGCCATCACCAATCCTGCTAAGGGGAATTCGGCAATCTTTGCTCTCACATCTTACTCTGGTATTAGGGAAAGATGAACTGGCAGCTCAATGTTTACTGTTGCATCTTCTATCCAGACTTCGTAATAAGGTGGATGTGGTTACCGTTGGTAGGCTCTCCTTGAATTTCACTGGCTTTAACAGAGAGAGTGTTTCTATATTTGGAAACCAGCTAAATAATTTGTTCCAGAGGCTACTACCATATTCA-CAAGTTATTCCTCTGTCAA-TTGAGTATCTCAACACAGCCACACTTCAGCCTAGAAAGGACAACCAATC-AGGAAGATTGGTTACAGGAGTTTTACAGTTACCTCAGGGTACTCACCTGACCTTTGATGAGACTCTCTTGCAGTCTGGATCATTGACATCCAAAGGTGTCGAGAATACTATGCTGCTTAAGAACTTGATGGAGTCACAGAAGGTT-GAG-TATGATTTT-GAG-TTCTA-CAAGTTGGAAATGG-CAACTGATGTGCAGCTACTAAT-TCTCT-CCGA-GGGAAAAT-CAAATATCCTACCTTCTGAC-TTGA-TAGTACC--TTTCC-GCCCATCATCTGTTCCTG-CGGTAAATGCAAGCTCCGA-GGAACTTGAAAGTTGGAGAT-GGTATTTGG-CCACAGTTAGGTCTCTT-CCTCAGTCAACTG-AAACTGATACATACCAGATGATTCAAGATGAAATGGTCAATGCCATGCGTGATGATAGGAGCTTGGGTTGTTCTGAACTTAGCAGATGGCTAACGATGGCACAGATAATGGCTGCAAGCTTTGGTGAGAAGAGTCTCTCCATGGAGCACTGGCAGATGGTGAAGGAGCTGGAGAGGCTCAGGAAGGAGAGGCTACAATGAGATGAGATCACAGTAAAATGTGCTTGTAAAATCCACTTGTGGCCGTGGCCCAATGTTATGTGTATACCACTAGGGTCTAAAATCTAAATCAAGATGTGGATCTGCAACATCTTCTGTGATCCTATGGAAGTATCAATGCCATTTGATAAGTTATCTGACCTGAAAAGCATCTCTTGCAATACCTGTGAAAAAAAAAATTGAACTTGCACCAAAAAAAAAA]

[+] EMBL AK073783             [TCCCGCCATTGCTCCGCTCCCCAATCTCCCCAACGAGAGAGAGAGAGAGCGAGGAGAGGGAGAGGGAGGATGGTGGGGCCGCAGTACGACCTCGTCGGGAACCCCCTGGGGGCGGTGCGCTCCACCTTCGAGAGGGCGGCGGCGGAGTCCGGTGGGCACGAGCCGGTGGCGGCGTTCCGGGGGAAAGACTGGGGCGCCACCGAGGTGTTCCGCTCCTTTCTCTTCGAGCAAGGCGGGCTTGACAAGGTTCCGGTGTTGGATGAATCAAATCTTGGATTGATCAAGCCGAATACCCTTGTTCGGTTCCGGGGGATGGTTCAGGACATGCTCGGGAACGAGTTCTATGTTGGTGCTTTCAAGGATGGCTCCACTTGGAGGACAAACAAATTCTCCGATTCCTCGCCGTTCTCAATGCCACACCCTTGTGATTCACATCTCTGGGAGCGCCATCTTTTCCACTGTGTGCCTGTGCCTGGACAAAATTCTTGGACACGCGAGTCGTCCCCTGGCCCTGACTTGCGCAGAATAGCAAGCTGCTTCACATCTGAACAAAGGGAGAAAAGGAAGAGGGGTGCAGATAATGACGCCATGGATGTTTCAGAAAGTGGTAGTGGAGAGACTTCTTCATCCAGCAAGAAGACGAAGGATGATGGTGTCAAGATCTCAAATAGTTCAGTAGAAATGTCAATGAATGAAGAACATCATGTCCCAGAGATGAATGGGGGAGATCATCATATTCCTGGAAGCTCCTTTTCCTGCCTAGTGAAGGTGTATGATATGCCTGAAAGTCAGGTGAAACTGAACGATGTTTCTGAGTTCATAGGTGTATATACATTTGACCCTGAACTTGCTGCTCCTAACGATAATTCGGATGATATAATGTTTGACCTTATGGAAGATGTAACCGCTCAGCTGCCTCCCAGTAAGGTTCCCCGTCTTCACTGCTTGGTATGGAGAAACTTATCTGCTCATGATTTTCTACCAAGGCCTCCTGCGGTTGAGCCATCACCAATCCTGCTAAGGGGAATTCGGCAATCTTTGCTCTCACATCTTACTCTGGTATTAGGGAAAGATGAACTGGCAGCTCAATGTTTACTGTTGCATCTTCTATCCAGACTTCGTAATAAGGTGGATGTGGTTACCGTTGGTAGGCTCTCCTTGAATTTCACTGGCTTTAACAGAGAGAGTGTTTCTATATTTGGAAACCAGCTAAATAATTTGTTCCAGAGGCTACTACCATATTCA CAAGTTATTCCTCTGTCAA TTGAGTATCTCAACACAGCCACACTTCAGCCTAGAAAGGACAACCAATC AGGAAGATTGGTTACAGGAGTTTTACAGTTACCTCAGGGTACTCACCTGACCTTTGATGAGACTCTCTTGCAGTCTGGATCATTGACATCCAAAGGTGTCGAGAATACTATGCTGCTTAAGAACTTGATGGAGTCACAGAAGGTT GAG TATGATTTT GAG TTCTA CAAGTTGGAAATGG CAACTGATGTGCAGCTACTAAT TCTCT CCGA GGGAAAAT CAAATATCCTACCTTCTGAC TTGA TAGTACC  TTTCC GCCCATCATCTGTTCCTG CGGTAAATGCAAGCTCCGA GGAACTTGAAAGTTGGAGAT GGTATTTGG CCACAGTTAGGTCTCTT CCTCAGTCAACTG AAACTGATACATACCAGATGATTCAAGATGAAATGGTCAATGCCATGCGTGATGATAGGAGCTTGGGTTGTTCTGAACTTAGCAGATGGCTAACGATGGCACAGATAATGGCTGCAAGCTTTGGTGAGAAGAGTCTCTCCATGGAGCACTGGCAGATGGTGAAGGAGCTGGAGAGGCTCAGGAAGGAGAGGCTACAATGAGATGAGATCACAGTAAAATGTGCTTGTAAAATCCACTTGTGGCCGTGGCCCAATGTTATGTGTATACCACTAGGGTCTAAAATCTAAATCAAGATGTGGATCTGCAACATCTTCTGTGATCCTATGGAAGTATCAATGCCATTTGAT                                                                         ]
[+] EMBL AK099378             [TCCCGCCATTGCTCCGCTCCCCAATCTCCCCAACGAGAGAGAGAGAGAGCGAGGAGAGGGAGAGGGAGGATGGTGGGGCCGCAGTACGACCTCGTCGGGAACCCCCTGGGGGCGGTGCGCTCCACCTTCGAGAGGGCGGCGGCGGAGTCCGGTGGGCACGAGCCGGTGGCGGCGTTCCGGGGGAAAGACTGGGGCGCCACCGAGGTGTTCCGCTCCTTTCTCTTCGAGCAAGGCGGGCTTGACAAGGTTCCGGTGTTGGATGAATCAAATCTTGGATTGATCAAGCCGAATACCCTTGTTCGGTTCCGGGGGATGGTTCAGGACATGCTCGGGAACGAGTTCTATGTTGGTGCTTTCAAGGATGGCTCCACTTGGAGGACAAACAAATTCTCCGATTCCTCGCCGTTCTCAATGCCACACCCTTGTGATTCACATCTCTGGGAGCGCCATCTTTTCCACTGTGTGCCTGTGCCTGGACAAAATTCTTGGACACGCGAGTCGTCCCCTGGCCCTGACTTGCGCAGAATAGCAAGCTGCTTCACATCTGAACAAAGGGAGAAAAGGAAGAGGGGTGCAGATAATGACGCCATGGATGTTTCAGAAAGTGGTAGTGGAGAGACTTCTTCATCCAGCAAGAAGACGAAGGATGATGGTGTCAAGATCTCAAATAGTTCAGTAGAAATGTCAATGAATGAAGAACATCATGTCCCAGAGATGAATGGGGGAGATCATCATATTCCTGGAAGCTCCTTTTCCTGCCTAGTGAAGGTGTATGATATGCCTGAAAGTCAGGTGAAACTGAACGATGTTTCTGAGTTCATAGGTGTATATACATTTGACCCTGAACTTGCTGCTCCTAACGATAATTCGGATGATATAATGTTTGACCTTATGGAAGATGTAACCGCTCAGCTGCCTCCCAGTAAGGTTCCCCGTCTTCACTGCTTGGTATGGAGAAACTTATCTGCTCATGATTTTCTACCAAGGCCTCCTGCGGTTGAGCCATCACCAATCCTGCTAAGGGGAATTCGGCAATCTTTGCTCTCACATCTTACTCTGGTATTAGGGAAAGATGAACTGGCAGCTCAATGTTTACTGTTGCATCTTCTATCCAGACTTCGTAATAAGGTGGATGTGGTTACCGTTGGTAGGCTCTCCTTGAATTTCACTGGCTTTAACAGAGAGAGTGTTTCTATATTTGGAAACCAGCTAAATAATTTGTTCCAGAGGCTACTACCATATTCA CAAGTTATTCCTCTGTCAA TTGAGTATCTCAACACAGCCACACTTCAGCCTAGAAAGGACAACCAATC AGGAAGATTGGTTACAGGAGTTTTACAGTTACCTCAGGGTACTCACCTGACCTTTGATGAGACTCTCTTGCAGTCTGGATCATTGACATCCAAAGGTGTCGAGAATACTATGCTGCTTAAGAACTTGATGGAGTCACAGAAGGTT GAG TATGATTTT GAG TTCTA CAAGTTGGAAATGG CAACTGATGTGCAGCTACTAAT TCTCT CCGA GGGAAAAT CAAATATCCTACCTTCTGAC TTGA TAGTACC  TTTCC GCCCATCATCTGTTCCTG CGGTAAATGCAAGCTCCGA GGAACTTGAAAGTTGGAGAT GGTATTTGG CCACAGTTAGGTCTCTT CCTCAGTCAACTG AAACTGATACATACCAGATGATTCAAGATGAAATGGTCAATGCCATGCGTGATGATAGGAGCTTGGGTTGTTCTGAACTTAGCAGATGGCTAACGATGGCACAGATAATGGCTGCAAGCTTTGGTGAGAAGAGTCTCTCCATGGAGCACTGGCAGATGGTGAAGGAGCTGGAGAGGCTCAGGAAGGAGAGGCTACAATGAGATGAGATCACAGTAAAATGTGCTTGTAAAATCCACTTGTGGCCGTGGCCCAATGTTATGTGTATACCACTAGGGTCTAAAATCTAAATCAAGATGTGGATCTGCAACATCTTCTGTGATCCTATGGAAGTATCAATGCCATTTGAT                                                                         ]
[+] EMBL AU165886             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CCGCTCAGCTGCCTCCCAGTAAGGTTCCCCGTCTTCACTGCTTGGTATGGAGAAACTTATCTGCTCATGATTTTCTACCAAGGCCTCCTGCGGTTGAGCCATCACCAATCCTGCTAAGGGGAATTCGGCAATCTTTGCTCTCACATCTTACTCTGGTATTAGGGAAAGATGAACTGGCAGCTCAATGTTTACTGTTGCATCTTCTATCCAGACTTCGTAATAAGGTGGATGTGGTTACCGTTGGTAGGCTCTCCTTGAATTTCACTGGCTTTAACAGAGAGAGTGTTTCTATATTTGGAAACCAGCTAAATAATTTGTTCCAGAGGCTACTACCATATTCACCAAGTTATTCCTCTGTCAATTTGAGTATCTCAACACAGCCACACTTCAGCCTAGAAA GNCCACCAATCAAGGAAGATTGGTTACAGGNGTTTTACAGTTACCTCANGGGACTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CA763430             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AATACTATGCTGCTTAAGAACTTGATAGAGTCACAGAAGGTT GAG TATGATTTT GAG TTCTA CAAGTTGGAAATGG CAACTGATGTGCAGCTACTAAT TCTCT CCGA GGGAAAAT CAAATATCCTACCTTCTGAC TTGA TAGTACC  TTTCC GCCCATCATCTGTTCCTG CGGTAAATGCAAGCTCCGA GGAACTTGAAAGTTGGAGAT GGTATTTGG CCACAGTTAGGTCTCTT CCTCAGTCAACTG AAACTGATACATACCAGATGATTCAAGATGAAATGGTCAATGCCATGCGTGATGATAGGAGCTTGGGTTGTTCTGAACTTAGCAGATGGCTAACAATGGCACAGATAATGGCTGCAAGCTTTGGTGAGAAGAGTCTCTCCATGGAGCACTGGCAGATGGTGAAGGAGCTGGAGAGGCTCAGGAAGGAGAGGCTACAATGAGATGAGATCCCAGTAAAATGTGCTTGTAAAATCCACTTGTGGCCGTGGCCCAATGTTATGTGTATACCACTAGGGTCTAAAATCTAAATCAAGATGTGGATCTGCAACATCTTCTGTGATCCTATGGAAGTATGAATGCCATTTGATAAGTTATCTGACCTGAAAAGCATCTCTTGCAATACCTGTGAAAAAAAAAATTGAACTTGCACCAAAAAAAAAA]
[+] EMBL AU030841             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     gtanTCACAGAAGGTTGGAGTTATGATTTTGGAGNTTCTACCAAGTTGGAAATGGCCAACTGATGTGCAGCTACTAATCTCTCTCCCGAGGGGAAAATCCAAATATCCTACCTTCTGACTTTGATTAGTACCCTTTTCCGGCCCATCATCTGTNCCTGCCGGTAAATGCAAGCTCCGAGGGAACTTGAAANTTGGAGATGGGTATTTGGCCCACAGTTAGGTCTCTTCCCTCAGTCAACTGAAAACTGATACATACCAGATGATTCAAGATGAAATGGTCAATGCCATGCGTGATGATAGGAGCTTGGGTTGTTCTGAACTTAGCAGATGGCTAACGATGGCACAGATAATGGCTGCAAGCTTTGGTGAGAAGAGTCTCTCCATGGAGCACTGGCAGATGGTGAAGGAGCTGGAGAGGCTCAGGAAGGAGAGGCTACAATGAGATGAGATCACAGTAAAATGTGCTTGTAAAATCCACTTGTGGCCGTGGCCCAATGTTATGTGTATACCACTAGGGTCTAAAATCTAAATCAAGATGTGGATCTGCAACATCTTCTGTGATCCTATGGAAGTATCAATGCCATTTGATAAGTTATCTGAaaaaaa                                                        ]




>consensus_8753#0
TCCCGCCATTGCTCCGCTCCCCAATCTCCCCAACGAGAGAGAGAGAGAGCGAGGAGAGGG
AGAGGGAGGATGGTGGGGCCGCAGTACGACCTCGTCGGGAACCCCCTGGGGGCGGTGCGC
TCCACCTTCGAGAGGGCGGCGGCGGAGTCCGGTGGGCACGAGCCGGTGGCGGCGTTCCGG
GGGAAAGACTGGGGCGCCACCGAGGTGTTCCGCTCCTTTCTCTTCGAGCAAGGCGGGCTT
GACAAGGTTCCGGTGTTGGATGAATCAAATCTTGGATTGATCAAGCCGAATACCCTTGTT
CGGTTCCGGGGGATGGTTCAGGACATGCTCGGGAACGAGTTCTATGTTGGTGCTTTCAAG
GATGGCTCCACTTGGAGGACAAACAAATTCTCCGATTCCTCGCCGTTCTCAATGCCACAC
CCTTGTGATTCACATCTCTGGGAGCGCCATCTTTTCCACTGTGTGCCTGTGCCTGGACAA
AATTCTTGGACACGCGAGTCGTCCCCTGGCCCTGACTTGCGCAGAATAGCAAGCTGCTTC
ACATCTGAACAAAGGGAGAAAAGGAAGAGGGGTGCAGATAATGACGCCATGGATGTTTCA
GAAAGTGGTAGTGGAGAGACTTCTTCATCCAGCAAGAAGACGAAGGATGATGGTGTCAAG
ATCTCAAATAGTTCAGTAGAAATGTCAATGAATGAAGAACATCATGTCCCAGAGATGAAT
GGGGGAGATCATCATATTCCTGGAAGCTCCTTTTCCTGCCTAGTGAAGGTGTATGATATG
CCTGAAAGTCAGGTGAAACTGAACGATGTTTCTGAGTTCATAGGTGTATATACATTTGAC
CCTGAACTTGCTGCTCCTAACGATAATTCGGATGATATAATGTTTGACCTTATGGAAGAT
GTAACCGCTCAGCTGCCTCCCAGTAAGGTTCCCCGTCTTCACTGCTTGGTATGGAGAAAC
TTATCTGCTCATGATTTTCTACCAAGGCCTCCTGCGGTTGAGCCATCACCAATCCTGCTA
AGGGGAATTCGGCAATCTTTGCTCTCACATCTTACTCTGGTATTAGGGAAAGATGAACTG
GCAGCTCAATGTTTACTGTTGCATCTTCTATCCAGACTTCGTAATAAGGTGGATGTGGTT
ACCGTTGGTAGGCTCTCCTTGAATTTCACTGGCTTTAACAGAGAGAGTGTTTCTATATTT
GGAAACCAGCTAAATAATTTGTTCCAGAGGCTACTACCATATTCACAAGTTATTCCTCTG
TCAATTGAGTATCTCAACACAGCCACACTTCAGCCTAGAAAGGACAACCAATCAGGAAGA
TTGGTTACAGGAGTTTTACAGTTACCTCAGGGTACTCACCTGACCTTTGATGAGACTCTC
TTGCAGTCTGGATCATTGACATCCAAAGGTGTCGAGAATACTATGCTGCTTAAGAACTTG
ATGGAGTCACAGAAGGTTGAGTATGATTTTGAGTTCTACAAGTTGGAAATGGCAACTGAT
GTGCAGCTACTAATTCTCTCCGAGGGAAAATCAAATATCCTACCTTCTGACTTGATAGTA
CCTTTCCGCCCATCATCTGTTCCTGCGGTAAATGCAAGCTCCGAGGAACTTGAAAGTTGG
AGATGGTATTTGGCCACAGTTAGGTCTCTTCCTCAGTCAACTGAAACTGATACATACCAG
ATGATTCAAGATGAAATGGTCAATGCCATGCGTGATGATAGGAGCTTGGGTTGTTCTGAA
CTTAGCAGATGGCTAACGATGGCACAGATAATGGCTGCAAGCTTTGGTGAGAAGAGTCTC
TCCATGGAGCACTGGCAGATGGTGAAGGAGCTGGAGAGGCTCAGGAAGGAGAGGCTACAA
TGAGATGAGATCACAGTAAAATGTGCTTGTAAAATCCACTTGTGGCCGTGGCCCAATGTT
ATGTGTATACCACTAGGGTCTAAAATCTAAATCAAGATGTGGATCTGCAACATCTTCTGT
GATCCTATGGAAGTATCAATGCCATTTGATAAGTTATCTGACCTGAAAAGCATCTCTTGC
AATACCTGTGAAAAAAAAAATTGAACTTGCACCAAAAAAAAAA
clustalw multiple alignements is not computed in this case