cluster # 8760

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Oryza sativa
cluster # 8760 cluster # 8760 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8760#0 length = 2057 sequences # 5
consensusID : consensus_8760#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2057
fasta sequence
                              [CATTTCCGGTAGCTGGGCCTTGGTCCCGGCAGCCTGGCTGATGCTCCTTGTCGGCGTGGCCAAGTATACAGAGAAGACGTTGGCGCTCCACGGCGCCAACCTGGCCAATGTCCGGAGATCCTTAGAGAGGCAGCAGCACCGCCA-TCACATGGGAGGTGGCAACCACCATTCTCAGCAGCTCGCGTTTGCGACAGATGACAATGATGGCGCCCTTGTGATGAAGGCTCATGCCCTGTTCCACATCTGCAAGAACTCCTTGGTGGACTCGTCGGTGGATATAGAATCCACATCTCCTTCCACCGCGCTGTTCGATCTCAGGTGGAAAGAGCTGTTCAGGGTGATGGAGATAGAGCTCTCCCTCATGTATGACTTCCTCTACACCAAGGCCACCATCATCCACACCTGGCATGGCTACTGCATCCGTGCGTTGTCGCCACTGGCGACCACCGTGTCACTGGTTCTGGTTGAGCTGAGCAATGAGGGCGGCCGCCGCCACAAGCAATCGGACATTGTCATCACCCGTGTACTGCTGGTGGCCACCTTCCTCCTTGAGTCGGCGTCGCTGCTCAGGGCTCTCAGCTCGACATGGACCGGCTTCTTGCTGCATAGCAAGTTGCAACCGGGTTGGATTCGCCATGAAGTCCTGTGCATGAGACGGTGGCATCGTTTCCATAGCGTCATCATGTCCCTTGGCTGGCCCGCCAAGGTGCAAGCTCACCGGCAGTGGTTAGGCAAGATGGGGCAGCTCAACATGTTGCAGCTGGTCATCACCCAGAAGGAGCTAGAGCGACCGGCGCCAAAGGGTGGTCAGTTCTGGGACAAGGAATATCAGCGATGCTCAAATGAAACCATGATCCCAGAAAATGTCAAGAAACTGGTTTCTGAGCTTGTCAGCCGTCAGTTGAAGGAGTTGAGGGATTATGTGAAAAAGGTGGTGGCGCAAGAAGGGGCGGATGCGTTGTCACAGGACGTTAACTTGCTGGAGATGGCAGTGTACTTGAGGAAGAAGAGGGGTCAGCAGGCACTAGAAAAGAACAATTTGCTCTCGGATCTCCGTTGGAGCCTCGGCAATGAGCTCCAGCTAGGCATCCTCACATGGCACATTGCCACCAACATGTTCCTCTTGTTGTCCGGCAAAGCCGCCAAGGCGAAGGGTGACGAAGGACCGAAGGTGTGTGCAATCATGACACTGTCCAACTACATGATGTACCTTCTCGCTCTTCGCCCTTACATGCTGCCGGGCCTGGTCACCCGCAAGCTTATCGAACTGACCTGCGAGGAATTGGCCCAGATTTGGTCCGAACATCAGGCAGCACCTGCCGCCGTCGATGACCTAGAGTCGTCGTCTTCTCCGAGCTTCTGCAATATTAGGGTCTTCATGCGGGGCAAATTCTCCCAGTGGCACAATCGTTGGCGAGTTTCTACCAGGCTCAGTCACGGCAGGGCGGAGGAGGAGGAGCTTGCTAGGATGCTCATCGAAAGGGACAATGAAACTGCCCTTAACAAATATCTCTCTCGTGGAATCGATGTCGCCCAGAAACTGCTCGACCTAGTAGACTTGCGCAAGGAGATTGACATGGTGCAGGTGATCCTGGCGGTGTGGGTGGAAATGCTGTTCTATGCGAGCTACCAGTGCAGCAAGGAGTCCCATGCCAAGCAGCTGAGCCAGGGGGGCGAGTTGACGACCATCGTGTGGCTCATGGCAGAACACGCCGGCCTGTTCCTTGTCAACAAAACCAGAAAGGGAGCTGAAGAGGCTAACTGGAGGAAAAGGAAAGCTAATAAGAAAAAAGAGGCCGGAACGTCTGATGCTACAGTTAACAAGCTAAGTTAACCTCCTCCGTCATTAATTAATTGCATGTCCTCCTGTTTGATTGCATAGAGTTCTTGTTATCATTCTCCTATTTGATTGCATAGAGTGGCAAGTTATAACTTTGTACGTGCCAAAATAGTTTCCATGGATTGCAATTTGTAAACAAACTCTTGCTCATACCCTAAGGTAATATAATTGCTCACTAATGTCTGCTAATAAACCTATCTTATATTAAAAAAAAAAA]

[+] EMBL AK063533             [CATTTCCGGTAGCTGGGCCTTGGTCCCGGCAGCCTGGCTGATGCTCCTTGTCGGCGTGGCCAAGTATACAGAGAAGACGTTGGCGCTCCACGGCGCCAACCTGGCCAATGTCCGGAGATCCTTAGAGAGGCAGCAGCACCGCCA TCACATGGGAGGTGGCAACCACCATTCTCAGCAGCTCGCGTTTGCGACAGATGACAATGATGGCGCCCTTGTGATGAAGGCTCATGCCCTGTTCCACATCTGCAAGAACTCCTTGGTGGACTCGTCGGTGGATATAGAATCCACATCTCCTTCCACCGCGCTGTTCGATCTCAGGTGGAAAGAGCTGTTCAGGGTGATGGAGATAGAGCTCTCCCTCATGTATGACTTCCTCTACACCAAGGCCACCATCATCCACACCTGGCATGGCTACTGCATCCGTGCGTTGTCGCCACTGGCGACCACCGTGTCACTGGTTCTGGTTGAGCTGAGCAATGAGGGCGGCCGCCGCCACAAGCAATCGGACATTGTCATCACCCGTGTACTGCTGGTGGCCACCTTCCTCCTTGAGTCGGCGTCGCTGCTCAGGGCTCTCAGCTCGACATGGACCGGCTTCTTGCTGCATAGCAAGTTGCAACCGGGTTGGATTCGCCATGAAGTCCTGTGCATGAGACGGTGGCATCGTTTCCATAGCGTCATCATGTCCCTTGGCTGGCCCGCCAAGGTGCAAGCTCACCGGCAGTGGTTAGGCAAGATGGGGCAGCTCAACATGTTGCAGCTGGTCATCACCCAGAAGGAGCTAGAGCGACCGGCGCCAAAGGGTGGTCAGTTCTGGGACAAGGAATATCAGCGATGCTCAAATGAAACCATGATCCCAGAAAATGTCAAGAAACTGGTTTCTGAGCTTGTCAGCCGTCAGTTGAAGGAGTTGAGGGATTATGTGAAAAAGGTGGTGGCGCAAGAAGGGGCGGATGCGTTGTCACAGGACGTTAACTTGCTGGAGATGGCAGTGTACTTGAGGAAGAAGAGGGGTCAGCAGGCACTAGAAAAGAACAATTTGCTCTCGGATCTCCGTTGGAGCCTCGGCAATGAGCTCCAGCTAGGCATCCTCACATGGCACATTGCCACCAACATGTTCCTCTTGTTGTCCGGCAAAGCCGCCAAGGCGAAGGGTGACGAAGGACCGAAGGTGTGTGCAATCATGACACTGTCCAACTACATGATGTACCTTCTCGCTCTTCGCCCTTACATGCTGCCGGGCCTGGTCACCCGCAAGCTTATCGAACTGACCTGCGAGGAATTGGCCCAGATTTGGTCCGAACATCAGGCAGCACCTGCCGCCGTCGATGACCTAGAGTCGTCGTCTTCTCCGAGCTTCTGCAATATTAGGGTCTTCATGCGGGGCAAATTCTCCCAGTGGCACAATCGTTGGCGAGTTTCTACCAGGCTCAGTCACGGCAGGGCGGAGGAGGAGGAGCTTGCTAGGATGCTCATCGAAAGGGACAATGAAACTGCCCTTAACAAATATCTCTCTCGTGGAATCGATGTCGCCCAGAAACTGCTCGACCTAGTAGACTTGCGCAAGGAGATTGACATGGTGCAGGTGATCCTGGCGGTGTGGGTGGAAATGCTGTTCTATGCGAGCTACCAGTGCAGCAAGGAGTCCCATGCCAAGCAGCTGAGCCAGGGGGGCGAGTTGACGACCATCGTGTGGCTCATGGCAGAACACGCCGGCCTGTTCCTTGTCAACAAAACCAGAAAGGGAGCTGAAGAGGCTAACTGGAGGAAAAGGAAAGCTAATAAGAAAAAAGAGGCCGGAACGTCTGATGCTACAGTTAACAAGCTAAGTTAACCTCCTCCGTCATTAATTAATTGCATGTCCTCCTGTTTGATTGCATAGAGTTCTTGTTATCATTCTCCTATTTGATTGCATAGAGTGGCAAGTTATAACTTTGTACGTGCCAAAATAGTTTCCATGGATTGCAATTTGTAAACAAACTCTTGCTCATACCCTAAGGTAATATAATTGCTCACT                                        ]
[+] EMBL AU097168             [                                                                                                                                             CCATTCACATGGGA GTGGCAACCACCATTCTCAGCAGCTCGCGTTTGCGACAGATGACAATGATGGCGCCCTTGTGATGAAGGCTCATGCCCTGTTCCACATCTGCAAGAACTCCTTGGTGGACTCGTCGGTGGATATAGAATCCACATCTCCTTCCACCGCGCTGTTCGATCTCAGGTGGAAAGAGCTGTTCAGGGTGATGGAGATAGAGCTCTCCCTCATGTATGACTTCCTCTACACCAAGGCCACCATCATCCACACCTGGCATGGCTACTGCATCCGTGCGTT   GCCACTGGCGACCACCGTGTCACTGGTTCTGGTTGAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CA999975             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GTTGGCGAGTTTCTACCAGGCTCAGTCACGGCAGCGTGGAGGAGGAGGAGCTTGCTAGGATGCTCATCGAAAGGGACAATGAAACTGCCCTTAACAAATATCTCTCTCGTGGAATCGATGTCGCCCAGAAACTGCTCGACCTAGTAGACTTGCGCAAGGAGATTGACATGGTGCAGGTGATCCTGGCGGTGTGGGTGGAAATGCTGTTCTATGCGAGCTACCAGTGCAGCAAGGAGTCCCATGCCAAGCAGCTGAGCCAGGGGGGCGAGTTGACGACCATCGTGTGGCTCATGGCAGAACACGCCGGCCTGTTCCTTGTCAACAAAACCAGAAAGGGAGCTGAAGAGGCTAACTGGAGGAAAAGGAAAGCTAATAAGAAAAAAGAGGCCGGAACGTCTGATGCTACAGTTAACAAGCTAAGTTAACCTCCTCCGTCATTAATTAATTGCATGTCCTCCTGTTTGATTGCATAGAGTTCTTGTTATCATTCTCCTATTTGATTGCATAGAGTGGCAAGTTATAACTTTGTACGTGCCAAAATAGTTTCCATGCATTGCAATTTGTAAACAAACTCTTGCTCATACCCTAAGGTAATATAATTGCTCACTACTGTCTGCTAATAAACCTATCTTATATTAAAAAAAAAAA]
[+] EMBL CF337180             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AACTGGAGGAAAAGGAAAGCTAATAAGAAAAAAGAGGCCGGAACGTCTGATGCTACAGTTAACAAGCTAAGTTAACCTCCTCCGTCATTAATTAATTGCATGTCCTCCTGTTTGATTGCATAGAGTTCTTGTTATCATTCTCCTATTTGATTGCATAGAGTGGCAAGTTATAACTTTGTACGTGCCAAAATAGTTTCCATGGATTGCAATTTGTAAACAAACTCTTGCTCATACCCTAAGGTAATATAATTGCTCAaaaa                                      ]
[-] EMBL CF317728             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ACTGGAGGAAAAGGAAAGCTAATAAGAAAAAAGAGGCCGGAACGTCTGATGCTACAGTTAACAAGCTAAGTTAACCTCCTCCGTCATTAATTAATTGCATGTCCTCCTGTTTGATTGCATAGAGTTCTTGTTATCATTCTCCTATTTGATTGCATAGAGTGGCAAGTTATAACTTTGTACGTGCCAAAATAGTTTCCATGGATTGCAATTTGTAAACAAACTCTTGCTCATACCCTAAGGTAATATAATTGCTCAaaaaa                                     ]




>consensus_8760#0
CATTTCCGGTAGCTGGGCCTTGGTCCCGGCAGCCTGGCTGATGCTCCTTGTCGGCGTGGC
CAAGTATACAGAGAAGACGTTGGCGCTCCACGGCGCCAACCTGGCCAATGTCCGGAGATC
CTTAGAGAGGCAGCAGCACCGCCATCACATGGGAGGTGGCAACCACCATTCTCAGCAGCT
CGCGTTTGCGACAGATGACAATGATGGCGCCCTTGTGATGAAGGCTCATGCCCTGTTCCA
CATCTGCAAGAACTCCTTGGTGGACTCGTCGGTGGATATAGAATCCACATCTCCTTCCAC
CGCGCTGTTCGATCTCAGGTGGAAAGAGCTGTTCAGGGTGATGGAGATAGAGCTCTCCCT
CATGTATGACTTCCTCTACACCAAGGCCACCATCATCCACACCTGGCATGGCTACTGCAT
CCGTGCGTTGTCGCCACTGGCGACCACCGTGTCACTGGTTCTGGTTGAGCTGAGCAATGA
GGGCGGCCGCCGCCACAAGCAATCGGACATTGTCATCACCCGTGTACTGCTGGTGGCCAC
CTTCCTCCTTGAGTCGGCGTCGCTGCTCAGGGCTCTCAGCTCGACATGGACCGGCTTCTT
GCTGCATAGCAAGTTGCAACCGGGTTGGATTCGCCATGAAGTCCTGTGCATGAGACGGTG
GCATCGTTTCCATAGCGTCATCATGTCCCTTGGCTGGCCCGCCAAGGTGCAAGCTCACCG
GCAGTGGTTAGGCAAGATGGGGCAGCTCAACATGTTGCAGCTGGTCATCACCCAGAAGGA
GCTAGAGCGACCGGCGCCAAAGGGTGGTCAGTTCTGGGACAAGGAATATCAGCGATGCTC
AAATGAAACCATGATCCCAGAAAATGTCAAGAAACTGGTTTCTGAGCTTGTCAGCCGTCA
GTTGAAGGAGTTGAGGGATTATGTGAAAAAGGTGGTGGCGCAAGAAGGGGCGGATGCGTT
GTCACAGGACGTTAACTTGCTGGAGATGGCAGTGTACTTGAGGAAGAAGAGGGGTCAGCA
GGCACTAGAAAAGAACAATTTGCTCTCGGATCTCCGTTGGAGCCTCGGCAATGAGCTCCA
GCTAGGCATCCTCACATGGCACATTGCCACCAACATGTTCCTCTTGTTGTCCGGCAAAGC
CGCCAAGGCGAAGGGTGACGAAGGACCGAAGGTGTGTGCAATCATGACACTGTCCAACTA
CATGATGTACCTTCTCGCTCTTCGCCCTTACATGCTGCCGGGCCTGGTCACCCGCAAGCT
TATCGAACTGACCTGCGAGGAATTGGCCCAGATTTGGTCCGAACATCAGGCAGCACCTGC
CGCCGTCGATGACCTAGAGTCGTCGTCTTCTCCGAGCTTCTGCAATATTAGGGTCTTCAT
GCGGGGCAAATTCTCCCAGTGGCACAATCGTTGGCGAGTTTCTACCAGGCTCAGTCACGG
CAGGGCGGAGGAGGAGGAGCTTGCTAGGATGCTCATCGAAAGGGACAATGAAACTGCCCT
TAACAAATATCTCTCTCGTGGAATCGATGTCGCCCAGAAACTGCTCGACCTAGTAGACTT
GCGCAAGGAGATTGACATGGTGCAGGTGATCCTGGCGGTGTGGGTGGAAATGCTGTTCTA
TGCGAGCTACCAGTGCAGCAAGGAGTCCCATGCCAAGCAGCTGAGCCAGGGGGGCGAGTT
GACGACCATCGTGTGGCTCATGGCAGAACACGCCGGCCTGTTCCTTGTCAACAAAACCAG
AAAGGGAGCTGAAGAGGCTAACTGGAGGAAAAGGAAAGCTAATAAGAAAAAAGAGGCCGG
AACGTCTGATGCTACAGTTAACAAGCTAAGTTAACCTCCTCCGTCATTAATTAATTGCAT
GTCCTCCTGTTTGATTGCATAGAGTTCTTGTTATCATTCTCCTATTTGATTGCATAGAGT
GGCAAGTTATAACTTTGTACGTGCCAAAATAGTTTCCATGGATTGCAATTTGTAAACAAA
CTCTTGCTCATACCCTAAGGTAATATAATTGCTCACTAATGTCTGCTAATAAACCTATCT
TATATTAAAAAAAAAAA
clustalw multiple alignements is not computed in this case