These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8788#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1094 fasta sequence [ACAGCCACACAAAT-CACAGCCTCCTTCAAACCGGCAGCCGGCGCCGGCTGCTGATCCTCTCCATCGCCGCCGTGGCCGTGCTGCCGGCGTGCCTCCAAATGACTCCGCCCGGCAGTATCAGCACCACCTCGTCGAACCTTCGGGCCCAGCAAAAACCCTCAATTCCCAAGAAACCGTGTGCTTTCGGAGCGCCACCGAGACACCTGCATCGCCCGTGCAAGAAGAACGCTGCCGTCTCGGTGGCGTGCACCGGGCAAGGCGAACAACGATCCAGCCCTGCCATCGCGGCGCCGCAGGAGGCTCAGGCAGGCACGTTTAGCGTCGAGTTCCGGACGCGGGACGGGTGCCGGCTGGGCATCTCCAGGTACCCGGACTTCGCGTACAACGCCCAGGGCGGCCGCGGCGTCGGCGTCGTCGCCAGCAGCGGCGAGGATAGTGGCACGGTTCTGGTCGAGTTCGACGTGTCAAGCCTGTACATCCCGGCGATGTCCGGCGCGACGACCAAGTTCCTCGGGCTGCCGCTGCCGCCGTTCCTCAAGATCGACATCTTGCCCGAGGCTCTCCGCGGAAACATCGATCCAACAAGTGGTCAGGTTGATCTGAAGTTCAGGTCGAGGTTCTGCTTCTCGGTTGGAAGCATCTACCGAGCACCGCCGCTGTTCGTCGACACAACGCTGACCTCCGAGGAGTCCAGTGGAGCCATAAGACGAGGAACTGGAGAAAGGATGGACGGCGAAGGGAGATGCAAGCTGGTAGGGGTGGCCGTCGTCGACCCCATTGATGACGTCTTCATGAACACCTTCCTCAGCCTGCCGACCGAGTGCATCGCTTACTTGAACGCCACCATCTCCATCACTGAACCAAGCTGATCTTGCCTGTTTCAGTTGGTTGTATAGATCTTAATGCGTGGTGAAACGCATGAATGTTGCAGGACGAAACTTGCACGGAAAAGAACAGACTGTACTATTGTAGTATTGGCCAAGGGAATGCCTCTTATTCATACAGATTTTATTTAAAAGAACGACTCATTCATACAGATATTATAAAAGTGGTAAATCCTAGAGAGGGATTAATTTTTTTTCTTGAAAAAAAAA] [+] EMBL AK068106 [ACAGCCACACAAAT CACAGCCTCCTTCAAACCGGCAGCCGGCGCCGGCTGCTGATCCTCTCCATCGCCGCCGTGGCCGTGCTGCCGGCGTGCCTCCAAATGACTCCGCCCGGCAGTATCAGCACCACCTCGTCGAACCTTCGGGCCCAGCAAAAACCCTCAATTCCCAAGAAACCGTGTGCTTTCGGAGCGCCACCGAGACACCTGCATCGCCCGTGCAAGAAGAACGCTGCCGTCTCGGTGGCGTGCACCGGGCAAGGCGAACAACGATCCAGCCCTGCCATCGCGGCGCCGCAGGAGGCTCAGGCAGGCACGTTTAGCGTCGAGTTCCGGACGCGGGACGGGTGCCGGCTGGGCATCTCCAGGTACCCGGACTTCGCGTACAACGCCCAGGGCGGCCGCGGCGTCGGCGTCGTCGCCAGCAGCGGCGAGGATAGTGGCACGGTTCTGGTCGAGTTCGACGTGTCAAGCCTGTACATCCCGGCGATGTCCGGCGCGACGACCAAGTTCCTCGGGCTGCCGCTGCCGCCGTTCCTCAAGATCGACATCTTGCCCGAGGCTCTCCGCGGAAACATCGATCCAACAAGTGGTCAGGTTGATCTGAAGTTCAGGTCGAGGTTCTGCTTCTCGGTTGGAAGCATCTACCGAGCACCGCCGCTGTTCGTCGACACAACGCTGACCTCCGAGGAGTCCAGTGGAGCCATAAGACGAGGAACTGGAGAAAGGATGGACGGCGAAGGGAGATGCAAGCTGGTAGGGGTGGCCGTCGTCGACCCCATTGATGACGTCTTCATGAACACCTTCCTCAGCCTGCCGACCGAGTGCATCGCTTACTTGAACGCCACCATCTCCATCACTGAACCAAGCTGATCTTGCCTGTTTCAGTTGGTTGTATAGATCTTAATGCGTGGTGAAACGCATGAATGTTGCAGGACGAAACTTGCACGGAAAAGAACAGACTGTACTATTGTAGTATTGGCCAAGGGAATGCC ] [+] EMBL CF335865 [ACAGCCACACAAATACACAGCCTCCTTCAAACCGGCAGCCGGCGCCGGCTGCTGATCCTCTCCATCGCCGCCGTGGCCGTGCTGCCGGCGTGCCTCCAAATGACTCCGCCCGGCAGTATCAGCACCACCTCGTCGAACCTTCGGGCCCAGCAAAAACCCTCAATTCCCAAGAAACCGTGTGCTTTCGGAGCGCCACCGAGACACCTGCATCGCCCGTGCAAGAAGAACGCTGCCGTCTCGGTGGCGTGCACCGGGCAAGGCGAACAACGATCCAGCCCTGCCATCGCGGCGCCGCAGGAGGCTCAGGCAGGCACGTTTAGCGTCGAGTTCCGGACGCGGGACGGGTGCCGGCTGGGCATCTCCAGGTACCCGGACTTCGCGTACAACGCCCAGGGCGGCCGCGGCGTCGGCGTCGTCGCCAGCAGCGGCGAGGATAGTGGCACGGTTCTGGTCGAGTTCGACGTGTCAAGCCTGTACATCCCGGCGATGTCCGGCGCGACGACCAAGTTCCTCGGGCTGCCGCTGC ] [+] EMBL CF333269 [ACAGCC CACAAAT ACAGCCTCCTTCAAACCGGCAGCCGGCGCCGGCTGCTGATCCTCTCCATCGCCGCCGTGGCCGTGCTGCCGGCGTGCCTCCAAATGACTCCGCCCGGCAGTATCAGCACCACCTCGTCGAACCTTCGGGCCCAGCAAAAACCCTCAATTCCCAAGAAACCGTGTGCTTTCGGAGCGCCACCGAGACACCTGCATCGCCCGTGCAAGAAGAACGCTGCCGTCTCGGTGGCGTGCACCGGGCAAGGC ] [-] EMBL CF333270 [ GCTGCCGCCGTTCCTCAAGATCGACATCTTGCCCGAGGCTCTCCGCGGAAACATCGATCCAACAAGTGGTCAGGTTGATCTGAAGTTCAGGTCGAGGTTCTGCTTCTCGGTTGGAAGCATCTACCGAGCACCGCCGCTGTTCGTCGACACAACGCTGACCTCCGAGGAGTCCAGTGGAGCCATAAGACGAGGAACTGGAGAAAGGATGGACGGCGAAGGGAGATGCAAGCTGGTTGGGGTGGCCGTCGTCGACCCCATTGATGACGTCTTCATGAACACCTTCCTCAGCCTGCCGACCGAGTGCATCGCTTACTTGAACGCCACCATCTCCATCACTGAACCAAGCTGATCTTGCCTGTTTCAGTTGGTTGTATAGATCTTAATGCGTGGTGAAACGCATGAATGTTGCAGGACGAAACTTGCACGGAAAAGAACAGACTGTACTATTGTAGTATTGGCCAAGGGAATGCCTCTTATTCATACAGATTTTATTTAAAA ] [-] EMBL CF335866 [ GACCTCCGAGGAGTCCAGTGGAGCCATAAGACGAGGAACTGGAGAAAGGATGGACGGCGAAGGGAGATGCAAGCTGGTAGGGGTGGCCGTCGTCGACCCCATTGATGACGTCTTCATGAACACCTTCCTCAGCCTGCCGACCGAGTGCATCGCTTACTTGAACGCCACCATCTCCATCACTGAACCAAGCTGATCTTGCCTGTTTCAGTTGGTTGTATAGATCTTAATGCGTGGTGAAACGCATGAATGTTGCAGGACGAAACTTGCACGGAAAAGAACAGACTGTACTATTGTAGTATTGGCCAAGGGAATGCCTTTTATTCATACAGATTTTATTTTTTTGAACGACTCATTCATACAGATATTATAAAAGTGGTAAATCCTAGAGAGGGATTAATTTTTTTTCTTGAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||