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Oryza sativa
cluster # 8828 cluster # 8828       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8828#0 length = 1406 sequences # 4  
consensus_8828#1 length = 812 sequences # 1  
consensus_8828#2 length = 716 sequences # 1  

consensusID : consensus_8828#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1406
fasta sequence
                              [AATCCCCGTTACCCCACGGGATCCAACCGGATTCTCCTTGTCCTTCTCCCTTCCTCCCTCGCCGGAGCCCGATCGAAGGTACGCCGCTTCCCATCGGATGGCTCCTCTCCTGTCACCACCGCTGCTTGCCGACTCGGTTGCCAAGTTCCATTGCTCCTCCACACCCACCCCCTGCTCCGGCAGTGTCCGGCGATGGGCAATCACAAGGTTCGCCGGGGCCGGGAGGAGGAGAGACTGGCACCGGAGACGGCGGACGTCCGGAAGGGGGGTCCTGACGGTTTCCGCGGTGGCGGCGGAGTCGCCCAGCTCCGGTGGTGGCGTCGCCGAAGACTACTACGCTGTTCTTGGCGTTATGCCGGATGCAACACCTCAGCAGATCAAGAAAGCGTACTACAATTGCATGAAAGCATGCCATCCTGATCTCAGTGGCAATGACCCCGATGTGACGAACTTCTGCATGTTCATCAATGAAGTTTACACGGTACTTACCGATCCCATCCAGCGAGCGGTGTATGATGAGATTCATGGCTATGCCGCAACAGCAACCAACCCCTTCTTCGATGACAGTGCCCCTAGGGATCATGTGTTTGTCGATGAGTTTAGCTGCATAGGATGTAAAAACTGTGCTAATGTGTGTTCTAAGGTCTTCGAAATTGAGGAAGATTTTGGTCGGGCAAGAGTTTACAATCAATCAGGCAATGCCGAACTAATTCAAGAAGCTATTGACACTTGTCCAGTTGACTGCATCCATTGGACATCAGCTGCACAACTTTCACTCCTTGAAGATGAAATGCGAAGAGTAGAAAGAGTGAATGTTGGTTTGATGCTAGCTGGGATGGGAAGTTCAGTTGATGTGTTTCGGATGGCAAGTACACGATGGGAGAAAAGACAGGCTAAAGTCTTGGAAAAGGTCAGAAGACGTGTGAGCCAAGAAGATTCTGGTAAGGGCAGCTCATGGAGTGATGTCTGGGGAGCACCAACAAGATATCGAAAGAACGAGGACGAAGCAAGGGAGAGAGCAAAGCGAGCAGCGGCGGCAGCGAGGAGGTGGAGAGAATACTCGAGGAAAGGTGCAGACAAGCCTCCCACATTCAAACTTCCAGAGGCAGTGTCCAACAAGGAGTGAGAGAACCGAACACAATCAAATGAGAGTTTTTATCAAAGCAGTGCTACCTAACCCCATTGAAATCATGTATAGTCTAATTATTTGCAGAGAGCTGTATAGCATTTATGCTCTCTCGCCCTCCATTCCACATGATGACCAATATCTTCCAATATTCTGCTTGAGATAGTTGGTGTTGGTCACCATATAGAATACAGAACTACAGATTCCAAGTGTAGAAAGATACTGTACCATTGCTACTCATACAGTTATGTACTTATGTTATGATGAAACTTAGAAACTT]

[+] EMBL AK100064             [AATCCCCGTTACCCCACGGGATCCAACCGGATTCTCCTTGTCCTTCTCCCTTCCTCCCTCGCCGGAGCCCGATCGAAGGTACGCCGCTTCCCATCGGATGGCTCCTCTCCTGTCACCACCGCTGCTTGCCGACTCGGTTGCCAAGTTCCATTGCTCCTCCACACCCACCCCCTGCTCCGGCAGTGTCCGGCGATGGGCAATCACAAGGTTCGCCGGGGCCGGGAGGAGGAGAGACTGGCACCGGAGACGGCGGACGTCCGGAAGGGGGGTCCTGACGGTTTCCGCGGTGGCGGCGGAGTCGCCCAGCTCCGGTGGTGGCGTCGCCGAAGACTACTACGCTGTTCTTGGCGTTATGCCGGATGCAACACCTCAGCAGATCAAGAAAGCGTACTACAATTGCATGAAAGCATGCCATCCTGATCTCAGTGGCAATGACCCCGATGTGACGAACTTCTGCATGTTCATCAATGAAGTTTACACGGTACTTACCGATCCCATCCAGCGAGCGGTGTATGATGAGATTCATGGCTATGCCGCAACAGCAACCAACCCCTTCTTCGATGACAGTGCCCCTAGGGATCATGTGTTTGTCGATGAGTTTAGCTGCATAGGATGTAAAAACTGTGCTAATGTGTGTTCTAAGGTCTTCGAAATTGAGGAAGATTTTGGTCGGGCAAGAGTTTACAATCAATCAGGCAATGCCGAACTAATTCAAGAAGCTATTGACACTTGTCCAGTTGACTGCATCCATTGGACATCAGCTGCACAACTTTCACTCCTTGAAGATGAAATGCGAAGAGTAGAAAGAGTGAATGTTGGTTTGATGCTAGCTGGGATGGGAAGTTCAGTTGATGTGTTTCGGATGGCAAGTACACGATGGGAGAAAAGACAGGCTAAAGTCTTGGAAAAGGTCAGAAGACGTGTGAGCCAAGAAGATTCTGGTAAGGGCAGCTCATGGAGTGATGTCTGGGGAGCACCAACAAGATATCGAAAGAACGAGGACGAAGCAAGGGAGAGAGCAAAGCGAGCAGCGGCGGCAGCGAGGAGGTGGAGAGAATACTCGAGGAAAGGTGCAGACAAGCCTCCCACATTCAAACTTCCAGAGGCAGTGTCCAACAAGGAGTGAGAGAACCGAACACAATCAAATGAGAGTTTTTATCAAAGCAGTGCTACCTAACCCCATTGAAATCATGTATAGTCTAATTATTTGCAGAGAGCTGTATAGCATTTATGCTCTCTCGCCCTCCATTCCACATGATGACCAATATCTTCCAATATTCTGCTTGAGATAGTTGGTGTTGGTCACCATATAGAATACAGAACTACAGATTCCAAGTGTAGAAAGATACTGTACCATTGCTACTCATACAGTTATGTACTTATGTTATGATGAAACTTAGAAACTT]
[+] EMBL CA753962             [                                                                                                                                                                  ACCCACCCCCTGCTCCGGCAGTGTCCGGCGATGGGCAATCACAAGGTTCGCCGGGGCCGGGAGGAGGAGAGACTGGCACCGGAGACGGCGGACGTCCGGAAGGGGGGTCCTGACGGTTTCCGCGGTGGCGGCGGAGTCGCCCAGCTCCGGTGGTGGCGTCGCCGAAGACTACTACGCTGTTCTTGGCGTTATGCCGGATGCAACACCTCAGCAGATCAAGAAAGCGTACTACAATTGCATGAAAGCATGCCATCCTGATCTCAGTGGCAATGACCCCGATGTGACGAACTTCTGCATGTTCATCAATGAAGTTTACACGGTACTTACCGATCCCATCCAGCGAGCGGTGTATGATGAGATTCATGGCTATGCCGCAACAGCAACCAACCCCTTCTTCGATGACAGTGCCCCTAGGGATCATGTGTTTGTCGATGAGTTTAGCTGCATAGGATGTAAAAACTGTGCTAATGTGTGTTCTAACGTCTTCGAAATTGAGGAAGATTTTGGTCGGGCCAGAGTTTACAATCAATCAGGCAATGCCGAACTCATTGCAGAAGCTATTGACACTTGTCCAGNTGACTGCCTCCATTGGACATCAGCTGCACAACTTTCACTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CA305848             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCATCCAGCGAGCGGTGTATGATGAGATTCATGGCTATGCCGCAACAGCAACCAACCCCTTCTTCGATGACAGTGCCCCTAGGGATCATGTGTTTGTCGATGAGTTTAGCTGCATAGGATGTAAAAACTGTGCTAATGTGTGTTCTAAGGTCTTCGAAATTGAGGAAGATTTTGGTCGGGCAAGAGTTTACAATCAATCAGGCAATGCCGAACTAATTCAAGAAGCTATTGACACTTGTCCAGTTGACTGCATCCATTGGACATCAGCTGCACAACTTTCACTCCTTGAAGATGAAATGCGAAGAGTAGAAAGAGTGAATGTTGGTTTGATGCTAGCTGGGATGGGAAGTTCAGTTGATGTGTTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CA305846             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCGGTGTATGATGAGATTCATGGCTATGCCGCAACAGCAACCAACCCCTTCTTCGATGACAGTGCCCCTAGGGATCATGTGTTTGTCGATGAGTTTAGCTGCATAGGATGTAAAAACTGTGCTAATGTGTGTTCTAAGGTCTTCGAAATTGAGGAAGATTTTGGTCGGGCAAGAGTTTACAATCAATCAGGCAATGCCGAACTAATTCAAGAAGCTATTGACACTTGTCCAGTTGACTGCATCCATTGGACATCAGCTGCACAACTTTCACTCCTTGAAGATGAAATGCGAAGAGTAGAAAGAGTGAATGTTGGTTTGATGCTAGCTGGGATGGGAAGTTCAGTTGATGTGTTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]


>consensus_8828#0 AATCCCCGTTACCCCACGGGATCCAACCGGATTCTCCTTGTCCTTCTCCCTTCCTCCCTC GCCGGAGCCCGATCGAAGGTACGCCGCTTCCCATCGGATGGCTCCTCTCCTGTCACCACC GCTGCTTGCCGACTCGGTTGCCAAGTTCCATTGCTCCTCCACACCCACCCCCTGCTCCGG CAGTGTCCGGCGATGGGCAATCACAAGGTTCGCCGGGGCCGGGAGGAGGAGAGACTGGCA CCGGAGACGGCGGACGTCCGGAAGGGGGGTCCTGACGGTTTCCGCGGTGGCGGCGGAGTC GCCCAGCTCCGGTGGTGGCGTCGCCGAAGACTACTACGCTGTTCTTGGCGTTATGCCGGA TGCAACACCTCAGCAGATCAAGAAAGCGTACTACAATTGCATGAAAGCATGCCATCCTGA TCTCAGTGGCAATGACCCCGATGTGACGAACTTCTGCATGTTCATCAATGAAGTTTACAC GGTACTTACCGATCCCATCCAGCGAGCGGTGTATGATGAGATTCATGGCTATGCCGCAAC AGCAACCAACCCCTTCTTCGATGACAGTGCCCCTAGGGATCATGTGTTTGTCGATGAGTT TAGCTGCATAGGATGTAAAAACTGTGCTAATGTGTGTTCTAAGGTCTTCGAAATTGAGGA AGATTTTGGTCGGGCAAGAGTTTACAATCAATCAGGCAATGCCGAACTAATTCAAGAAGC TATTGACACTTGTCCAGTTGACTGCATCCATTGGACATCAGCTGCACAACTTTCACTCCT TGAAGATGAAATGCGAAGAGTAGAAAGAGTGAATGTTGGTTTGATGCTAGCTGGGATGGG AAGTTCAGTTGATGTGTTTCGGATGGCAAGTACACGATGGGAGAAAAGACAGGCTAAAGT CTTGGAAAAGGTCAGAAGACGTGTGAGCCAAGAAGATTCTGGTAAGGGCAGCTCATGGAG TGATGTCTGGGGAGCACCAACAAGATATCGAAAGAACGAGGACGAAGCAAGGGAGAGAGC AAAGCGAGCAGCGGCGGCAGCGAGGAGGTGGAGAGAATACTCGAGGAAAGGTGCAGACAA GCCTCCCACATTCAAACTTCCAGAGGCAGTGTCCAACAAGGAGTGAGAGAACCGAACACA ATCAAATGAGAGTTTTTATCAAAGCAGTGCTACCTAACCCCATTGAAATCATGTATAGTC TAATTATTTGCAGAGAGCTGTATAGCATTTATGCTCTCTCGCCCTCCATTCCACATGATG ACCAATATCTTCCAATATTCTGCTTGAGATAGTTGGTGTTGGTCACCATATAGAATACAG AACTACAGATTCCAAGTGTAGAAAGATACTGTACCATTGCTACTCATACAGTTATGTACT TATGTTATGATGAAACTTAGAAACTT



consensusID : consensus_8828#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 812
fasta sequence
                              [TCTTCGAAATTGAGGAAGATTTTGGTCGGGCAAGAGTTTACAATCAATCAGGCAATGCCGAACTAATTCAAGAAGCTATTGACACTTGGTGAGATTGTTGAATTTCAAAATTTTGCTAAAAAAAGGAAAAAATGTTACAAGTTTGCTGAACAAATTTCAGTGTTTCCCCCATTTGTATGCTAGACTAATATTACTGCTCTGAATTTCTGATACGCAGTCCAGTTGACTGCATCCATTGGACATCAGCTGCACAACTTTCACTCCTTGAAGATGAAATGCGAAGAGTAGAAAGAGTGAATGTAAGGAAAACATCAAAGATATTTCCAATAACCTCATGTCTATCGGTCTATCAGGCAGTAGTTTATATGTTTGTTATTTCCAAACCTGCCAGATTGTGATATCTTGCAAAAGCATATTATTTTTTTCTTCCATTTGAGCAGGTTGGTTTGATGCTAGCTGGGATGGGAAGTTCAGTTGATGTGTTTCGGATGGTAATTTCCTAGTACTTAATTTGTAATTTTATTATCCATTCTAGTACCATTCTAGTACTATTCTGTACTTTTGCAACACTCCACACTGTCAATTCAAAACATGGCATAAGTTCATCGGAAAAGAACAGATTTTTTTTTTCTTTTGCATCCAGAAGTAGATACTCCTACCTGGTACAGTAGACTAGTACGGTGTGGATTTTCTGAAGTTTGAGCCACCGTTTCTTCAGAAAGTCCTTAATTTGTTTTTTATCTTCTCTGTCTGCCAGGCAAGTACACGATGGGAGAAAAGACAGGCTAAAGTCTTGGTATAATTCTCTGTTT]

[+] EMBL CB684286             [TCTTCGAAATTGAGGAAGATTTTGGTCGGGCAAGAGTTTACAATCAATCAGGCAATGCCGAACTAATTCAAGAAGCTATTGACACTTGGTGAGATTGTTGAATTTCAAAATTTTGCTAAAAAAAGGAAAAAATGTTACAAGTTTGCTGAACAAATTTCAGTGTTTCCCCCATTTGTATGCTAGACTAATATTACTGCTCTGAATTTCTGATACGCAGTCCAGTTGACTGCATCCATTGGACATCAGCTGCACAACTTTCACTCCTTGAAGATGAAATGCGAAGAGTAGAAAGAGTGAATGTAAGGAAAACATCAAAGATATTTCCAATAACCTCATGTCTATCGGTCTATCAGGCAGTAGTTTATATGTTTGTTATTTCCAAACCTGCCAGATTGTGATATCTTGCAAAAGCATATTATTTTTTTCTTCCATTTGAGCAGGTTGGTTTGATGCTAGCTGGGATGGGAAGTTCAGTTGATGTGTTTCGGATGGTAATTTCCTAGTACTTAATTTGTAATTTTATTATCCATTCTAGTACCATTCTAGTACTATTCTGTACTTTTGCAACACTCCACACTGTCAATTCAAAACATGGCATAAGTTCATCGGAAAAGAACAGATTTTTTTTTTCTTTTGCATCCAGAAGTAGATACTCCTACCTGGTACAGTAGACTAGTACGGTGTGGATTTTCTGAAGTTTGAGCCACCGTTTCTTCAGAAAGTCCTTAATTTGTTTTTTATCTTCTCTGTCTGCCAGGCAAGTACACGATGGGAGAAAAGACAGGCTAAAGTCTTGGTATAATTCTCTGTTT]


>consensus_8828#1 TCTTCGAAATTGAGGAAGATTTTGGTCGGGCAAGAGTTTACAATCAATCAGGCAATGCCG AACTAATTCAAGAAGCTATTGACACTTGGTGAGATTGTTGAATTTCAAAATTTTGCTAAA AAAAGGAAAAAATGTTACAAGTTTGCTGAACAAATTTCAGTGTTTCCCCCATTTGTATGC TAGACTAATATTACTGCTCTGAATTTCTGATACGCAGTCCAGTTGACTGCATCCATTGGA CATCAGCTGCACAACTTTCACTCCTTGAAGATGAAATGCGAAGAGTAGAAAGAGTGAATG TAAGGAAAACATCAAAGATATTTCCAATAACCTCATGTCTATCGGTCTATCAGGCAGTAG TTTATATGTTTGTTATTTCCAAACCTGCCAGATTGTGATATCTTGCAAAAGCATATTATT TTTTTCTTCCATTTGAGCAGGTTGGTTTGATGCTAGCTGGGATGGGAAGTTCAGTTGATG TGTTTCGGATGGTAATTTCCTAGTACTTAATTTGTAATTTTATTATCCATTCTAGTACCA TTCTAGTACTATTCTGTACTTTTGCAACACTCCACACTGTCAATTCAAAACATGGCATAA GTTCATCGGAAAAGAACAGATTTTTTTTTTCTTTTGCATCCAGAAGTAGATACTCCTACC TGGTACAGTAGACTAGTACGGTGTGGATTTTCTGAAGTTTGAGCCACCGTTTCTTCAGAA AGTCCTTAATTTGTTTTTTATCTTCTCTGTCTGCCAGGCAAGTACACGATGGGAGAAAAG ACAGGCTAAAGTCTTGGTATAATTCTCTGTTT



consensusID : consensus_8828#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 716
fasta sequence
                              [GCTTTCTTTAGGCAAACATAAGAAATAATAATTTAAGATTTTTAGGATGAACCTTCGTTACTCCTATTTCATTGTAGTATGTAAACTGTCTGTTTTTCTTTGAAACCTGTCTGTCTTGTAGGAAAAGGTCAGAAGACGTGTGAGCCAAGAAGATTTTGGTAAGGGCAGCTCATGGAGTGATGTTTGGGGAGCACCAACAAGATATTGAAAGAACGGTAAAGCTAGCGTAATTTGCCATTGGCAATTGCTACTAATTTGCTCATACCATTTGGATTCCCATCCAGTACCCACATAGCCGTTTTTTTAACTTTCCTGCTAACACATTGAGCAGAGGACGAAGCAAGGGAGAGAGCAAAGCGAGCAGCGGCGGCAGCGAGGAGGTGGAGAGAATACTCGAGGAAAGGTGCAGACAAGCCTCCCACATTCAAACTTCCAGAGGCAGTGTCCAACAAGGAGTGAGAGAACAGAACACAATCAAATGAGAACTTTTATCAAAGCAGTGCTACCTAACCCCATTGAAATCATGTATAGTTTAATTATTTGCAGAGAGCTGTATAGCATTTATGCTTTTTCGCCCTCCATTCCACATGATGACCAATATTTTCCAATATTTTGCTTGAGATAGTTGGTGTTGGTCCCCATATAGAATACAGAACTACAGATTCCAAGTGTAGAAAGATACTGTACCATTGCTACTCATACAGGTATGTACTTAT]

[-] EMBL CB684287             [GCTTTCTTTAGGCAAACATAAGAAATAATAATTTAAGATTTTTAGGATGAACCTTCGTTACTCCTATTTCATTGTAGTATGTAAACTGTCTGTTTTTCTTTGAAACCTGTCTGTCTTGTAGGAAAAGGTCAGAAGACGTGTGAGCCAAGAAGATTTTGGTAAGGGCAGCTCATGGAGTGATGTTTGGGGAGCACCAACAAGATATTGAAAGAACGGTAAAGCTAGCGTAATTTGCCATTGGCAATTGCTACTAATTTGCTCATACCATTTGGATTCCCATCCAGTACCCACATAGCCGTTTTTTTAACTTTCCTGCTAACACATTGAGCAGAGGACGAAGCAAGGGAGAGAGCAAAGCGAGCAGCGGCGGCAGCGAGGAGGTGGAGAGAATACTCGAGGAAAGGTGCAGACAAGCCTCCCACATTCAAACTTCCAGAGGCAGTGTCCAACAAGGAGTGAGAGAACAGAACACAATCAAATGAGAACTTTTATCAAAGCAGTGCTACCTAACCCCATTGAAATCATGTATAGTTTAATTATTTGCAGAGAGCTGTATAGCATTTATGCTTTTTCGCCCTCCATTCCACATGATGACCAATATTTTCCAATATTTTGCTTGAGATAGTTGGTGTTGGTCCCCATATAGAATACAGAACTACAGATTCCAAGTGTAGAAAGATACTGTACCATTGCTACTCATACAGGTATGTACTTAT]


>consensus_8828#2 GCTTTCTTTAGGCAAACATAAGAAATAATAATTTAAGATTTTTAGGATGAACCTTCGTTA CTCCTATTTCATTGTAGTATGTAAACTGTCTGTTTTTCTTTGAAACCTGTCTGTCTTGTA GGAAAAGGTCAGAAGACGTGTGAGCCAAGAAGATTTTGGTAAGGGCAGCTCATGGAGTGA TGTTTGGGGAGCACCAACAAGATATTGAAAGAACGGTAAAGCTAGCGTAATTTGCCATTG GCAATTGCTACTAATTTGCTCATACCATTTGGATTCCCATCCAGTACCCACATAGCCGTT TTTTTAACTTTCCTGCTAACACATTGAGCAGAGGACGAAGCAAGGGAGAGAGCAAAGCGA GCAGCGGCGGCAGCGAGGAGGTGGAGAGAATACTCGAGGAAAGGTGCAGACAAGCCTCCC ACATTCAAACTTCCAGAGGCAGTGTCCAACAAGGAGTGAGAGAACAGAACACAATCAAAT GAGAACTTTTATCAAAGCAGTGCTACCTAACCCCATTGAAATCATGTATAGTTTAATTAT TTGCAGAGAGCTGTATAGCATTTATGCTTTTTCGCCCTCCATTCCACATGATGACCAATA TTTTCCAATATTTTGCTTGAGATAGTTGGTGTTGGTCCCCATATAGAATACAGAACTACA GATTCCAAGTGTAGAAAGATACTGTACCATTGCTACTCATACAGGTATGTACTTAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8828#0      AATCCCCGTTACCCCACGGGATCCAACCGGATTCTCCTTGTCCTTCTCCCTTCCTCCCTC 60
consensus_8828#2      ------------------------------------------------------------
consensus_8828#1      ------------------------------------------------------------
                                                                                  

consensus_8828#0      GCCGGAGCCCGATCGAAGGTACGCCGCTTCCCATCGGATGGCTCCTCTCCTGTCACCACC 120
consensus_8828#2      ------------------------------------------------------------
consensus_8828#1      ------------------------------------------------------------
                                                                                  

consensus_8828#0      GCTGCTTGCCGACTCGGTTGCCAAGTTCCATTGCTCCTCCACACCCACCCCCTGCTCCGG 180
consensus_8828#2      ------------------------------------------------------------
consensus_8828#1      ------------------------------------------------------------
                                                                                  

consensus_8828#0      CAGTGTCCGGCGATGGGCAATCACAAGGTTCGCCGGGGCCGGGAGGAGGAGAGACTGGCA 240
consensus_8828#2      ------------------------------------------------------------
consensus_8828#1      ------------------------------------------------------------
                                                                                  

consensus_8828#0      CCGGAGACGGCGGACGTCCGGAAGGGGGGTCCTGACGGTTTCCGCGGTGGCGGCGGAGTC 300
consensus_8828#2      ------------------------------------------------------------
consensus_8828#1      ------------------------------------------------------------
                                                                                  

consensus_8828#0      GCCCAGCTCCGGTGGTGGCGTCGCCGAAGACTACTACGCTGTTCTTGGCGTTATGCCGGA 360
consensus_8828#2      ------------------------------------------------------------
consensus_8828#1      ------------------------------------------------------------
                                                                                  

consensus_8828#0      TGCAACACCTCAGCAGATCAAGAAAGCGTACTACAATTGCATGAAAGCATGCCATCCTGA 420
consensus_8828#2      ------------------------------------------------------------
consensus_8828#1      ------------------------------------------------------------
                                                                                  

consensus_8828#0      TCTCAGTGGCAATGACCCCGATGTGACGAACTTCTGCATGTTCATCAATGAAGTTTACAC 480
consensus_8828#2      ------------------------------------------------------------
consensus_8828#1      ------------------------------------------------------------
                                                                                  

consensus_8828#0      GGTACTTACCGATCCCATCCAGCGAGCGGTGTATGATGAGATTCATGGCTATGCCGCAAC 540
consensus_8828#2      ------------------------------------------------------------
consensus_8828#1      -----------------------------TCTTCGAAATTGAGGAAGATTTTGGTCGGGC 31
                                                                                  

consensus_8828#0      AGCAACCAACCCCTTCTTCGATGACAGTGCCCCTAGGGATCATGTGTTTGTCGATGAGTT 600
consensus_8828#2      ------------------------------------------------------------
consensus_8828#1      AAGAGTTTACAATCAATCAGGCAATGCCGAACTAATTCAAGAAGCTATTGACACTTGGTG 91
                                                                                  

consensus_8828#0      TAGCTGCATAGGATGTAAAAACTGTGCTAATGTGTGTTCTAAGGTCTTCGAAATTGAGGA 660
consensus_8828#2      ------------------------------------------------------------
consensus_8828#1      AGATTG--TTGAATTTCAAAATTTTGCTAAAAAAAGGAAAAAATGTTACAAGTTTGCTGA 149
                                                                                  

consensus_8828#0      AGATTTTGGTCGGGCAAGAGTTTACAATCAATCAGGCAATGCCGAACTAATTCAAGAAGC 720
consensus_8828#2      --GCTTTCTTTAGGCAAA----CATAAGAAATAA--TAATTTAAGATTTTTAGGATGAAC 52
consensus_8828#1      ACAAATT--TCAGT---GTTTCCCCCATTTGTATGCTAGACTAATATTACTGCTCTGAAT 204
                           **  *  *             *    *     *       * *  *      *  

consensus_8828#0      TATTGACACTT-GTCCAGTTGACTGCATCCATTGGACATCAGCTGCACAACTTTCACTCC 779
consensus_8828#2      CTTCGTTACT---CCTATTTCATTGTAGTA--TGTAAACTGTCTGTTTTTCTTTGAAACC 107
consensus_8828#1      TTCTGATACGCAGTCCAGTTGACTGCATCCATTGGACATCAGCTGCACAACTTTCACTCC 264
                          *  **     * * ** * ** *     ** * *    ***     **** *  **

consensus_8828#0      T-TGAAGATGAAATGCGAAGAGTAGAAAGAGTGAATGTTGGTTTGATGCTAGCTGGGATG 838
consensus_8828#2      TGTCTGTCTTGTAGGAAAAGGTCAGAAGACGTGTGAGCCAAGAAGATTTTGGTAAGGGCA 167
consensus_8828#1      T-TGAAGATGAAATGCGAAGAGTAGAAAGAGTGAATGTAAGGAAAACATCAAAGATATTT 323
                      * *     *   * *  ***   ****   ***   *        *              

consensus_8828#0      GGAAGTTCAGTTGATGTGTTTCGGA-TGGCAAGTACACGATGGGAGAAAAGACAGGCTAA 897
consensus_8828#2      GCTCATGGAGT-GATGTTTGGGGAG-CACCAACAAGATATTGAAAGAACGGTAAAGCTAG 225
consensus_8828#1      CCAA--TAACCTCATGTCTATCGGTCTATCAGGCAGTAGTTTATATGTTTGTTATTTCCA 381
                              *    **** *   *      **   *     *   *     *  *      

consensus_8828#0      AGTC--------TTGGAAAAGGTCAG-AAGACGTGTGAGCCAAGAAGATTCTGGTAAGGG 948
consensus_8828#2      CGTAATTTGCCATTGGCAATTGCTACTAATTTGCTCATACCATTTGGATTCCCATCCAGT 285
consensus_8828#1      AACCTGCCAG-ATTGTGATATCTTGCAAAAGCATATTATTTTTTT--CTTCCATTTGAGC 438
                                  ***  *         **                   ***   *   * 

consensus_8828#0      CAGCTCATGGAGTGATGTCTGGGGAGCACCAACAAGATATCGAAAGAACGAGGACGAAGC 1008
consensus_8828#2      ACCCACATAGC-CGTTTTTTTAACTTTCCTGCTAACACATTGAGCA---GAGGACGAAGC 341
consensus_8828#1      AGGTTGGTTTGATGCTAGCTGGGATGGGAAGTTCAGTTGATGTGTTTCGGATGGTAATTT 498
                             *     * *   *              *      *       ** *   *   

consensus_8828#0      AAGGGAGAGAGCAAAGCGAGCAGCGGCGGCAGCGAGGAGGTGGAGAGAATACTCGAGGAA 1068
consensus_8828#2      AAGGGAGAGAGCAAAGCGAGCAGCGGCGGCAGCGAGGAGGTGGAGAGAATACTCGAGGAA 401
consensus_8828#1      ----CCTAGTACTTAATTTGTAATTTTATTATCCA-----TTCTAGTACCATTCTAGTAC 549
                             **  *  *    * *        * * *     *      *  * ** ** * 

consensus_8828#0      AGGTGCAGACAAGCCTCCCACATTCAAACTTCCAGAGGCAGTGTCCAACAAGGAGTGAGA 1128
consensus_8828#2      AGGTGCAGACAAGCCTCCCACATTCAAACTTCCAGAGGCAGTGTCCAACAAGGAGTGAGA 461
consensus_8828#1      TATTCTGTACT--TTTGCAACACTCCA-----CACTGTCAATTCAAAACATGGCATAAGT 602
                         *    **     * * *** ** *     **  * ** *    **** **  * ** 

consensus_8828#0      GAACCGAACACAATCAAATGAGAGTTTTTATCAAAGCAGTGCTACCTAACCCCATTGAAA 1188
consensus_8828#2      GAACAGAACACAATCAAATGAGAACTTTTATCAAAGCAGTGCTACCTAACCCCATTGAAA 521
consensus_8828#1      TCATCGGAAAAGAACAGATTTTTTTTTTCTTT-------TGCATCCAGAAGTAGAT--AC 653
                        *  * * *  * ** **      ***  *        ***  **  *      *  * 

consensus_8828#0      TCATGTATAGTCTAATTATTTGCAGAGAGCTGTATAGCATTTATGCTCTCTCGCCCTCCA 1248
consensus_8828#2      TCATGTATAGTTTAATTATTTGCAGAGAGCTGTATAGCATTTATGCTTTTTCGCCCTCCA 581
consensus_8828#1      TCCTACCTGGTACAGTAGACT----AGTACGGTGTGGATTTTCTGAAGTTTGAGCCACCG 709
                      ** *   * **  * *    *    **  * ** * *  *** **   * *   ** ** 

consensus_8828#0      TTCCACATGATGACCAATATCTTCCAATATTCTGCTTGAGATAGTTGGTGTTGGTCACCA 1308
consensus_8828#2      TTCCACATGATGACCAATATTTTCCAATATTTTGCTTGAGATAGTTGGTGTTGGTCCCCA 641
consensus_8828#1      TTTCTTCAGAAAGTCCTTAATTT---GTTTTTTATCTTCTCTGTCTGCCA--GGCAAGTA 764
                      ** *    **    *  **  **    * ** *   *    *   **     **     *

consensus_8828#0      TATAGAATACAGAACTACAGATTCCAAGTGTAGAAAGATACTGTACCATTGCTACTCATA 1368
consensus_8828#2      TATAGAATACAGAACTACAGATTCCAAGTGTAGAAAGATACTGTACCATTGCTACTCATA 701
consensus_8828#1      CACGATGGGAGAAAAGACAGGCTAAAGTCTTGGTATAATTCTCTGTTT------------ 812
                       *          **  ****  *  *    * * *  ** ** *                

consensus_8828#0      CAGTTATGTACTTATGTTATGATGAAACTTAGAAACTT 1406
consensus_8828#2      CAGGTATGTACTTAT----------------------- 716
consensus_8828#1      --------------------------------------
                                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)