These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8840#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1765 fasta sequence [GGAAACAAGTAGAGGAATCAATTGAGAAGCATAGGCAGGCTGTGAAAGAGGTGATTGAGCATTATACTGGAATATCCTCTCAAATCCCATCTGGATCTGCAATCGATGAGCAGCTGCGTTCATATTTCCTTGCCATCAAAGCTGTTGAGGAGTCTCCGAGTCCCTTCCAAGATGGTGCAGCAAGCCAGACACCATCTGTTGAAAGTGCCGATGTGGATGCATCTGCAGCTACTGCAGGGAGACAGGTAGCTACTCCACCAAGGCCTGCTCAAGTTAAAGTGGTGGAGGAGAGAGCAGTTTCTACTTTGCCCAAACCAAGCACTGAAGTACGTAGACCAGGAGGAAGGAGACCACTTGTTCGACCTTCACTTGAACGAGTTGAAGAACCCCAAGCTGATATTGATACAACAGTAGTTGAAGGTTCCACAGAGAAAGGCGGCTTGTTGATGGAGCGTGAAACTCCTGGTGGTGTATCTGCGTTACAGCCATCAAGTCGTAAACGTCTAATTCCATCACCACAAACGAGAGATGATGCTTCACAAGGAGAGACAACGGATGCCAATCCACCACTGAAGAAACCCAAAGAAGGATCTTCACAATGTACTAGTGAGCTAAAAACTGAACAGTCACCTCATGAAGATGTCATGGCACCTGTTCCTGTGCTACCATCTACAGAGTTAGATGAGCAACAGCCTGGAGAAGAGATGGACACCGATCAGTCTTCCTTGCCAGTTGAAGAGGTTGAGGAAACAAGGGAGGATGACTTGGGTGATAAGGATGACATGGAAACACATATAGACGCTTCAATGGACATCCAAGGACAAGATGCAGAAACTGGTATTGATAATGATGCAACTACTGTGGAAGATGTGCCAGTCAAGTCAGAAGCGGTTATGGAATCACTGGAGGAAGACCTGAAAACTGAGGATGGGAAGGAAGAGGGTCAGTTTACTGCAACCACTGATGTTGAAGATGAGAGGGAGGAGGGAGAGTTGCCAGATGAACCAGAACAACCAGACAGCACTCCCCCTGTGCTGGATGTTGGTGAGCAAGCCGGTGATTCTTTCAGGGCGGCATCTCCAGCAGGACCAACTGAAAAGAGTGATGTTGACATGCCAGAAGAAACTGGAGAAGGTGATGGTACCATGGAATCAGACCAAAGCCCTGTACCACAATCTGGTGGAGCAGATGCGTCACCGAGCCAAATGGCTGATGCGTCACCAAGCCCTGCACGTGAACCTTCTCCTAACCCAGTCCAAGCTGGTGCACCTCCTGAACAGCAGAATCCCACCCCTCCTAACCCAGTCCAAGCTGGTGCATCTTCTGAACAGCAGAATCCCGCCACTGCAGCAGAAGGTGTTGAAACTCGTAGTACCAGAACAATCAACCTAACTGAGAGAGCGAGGCAAAACCGGCAAGCCAGGATTCTTCGCTCAGCCACTCAACAGAATGCAAGGGGCCGTGGCAACCAGTCTCTTACATACAGGAAAGATGGCGGCCGAGGAACACGGGGTCGTGGTGGGCGTGGTCAGTCGTAGAGAATTTAGGTTTGTCTTTGCTCAAGCGCGGAGACTAGTTTTTTGCAAAGGACATACTGAATCAGGGCGGCATCATATTCATTTTGTAGCACTATCAGAATTGCGAGCGTACATGTTACTCTGCTTAGACAAATTCATGTGGCTAAGCAGCGCTTATTAAAATGTTCTCATTGCCCGTGCGGATTGCCAGATGACCTATATTTAAATTGAACTCTAGTTGACAAAGA] [+] EMBL AK060525 [GGAAACAAGTAGAGGAATCAATTGAGAAGCATAGGCAGGCTGTGAAAGAGGTGATTGAGCATTATACTGGAATATCCTCTCAAATCCCATCTGGATCTGCAATCGATGAGCAGCTGCGTTCATATTTCCTTGCCATCAAAGCTGTTGAGGAGTCTCCGAGTCCCTTCCAAGATGGTGCAGCAAGCCAGACACCATCTGTTGAAAGTGCCGATGTGGATGCATCTGCAGCTACTGCAGGGAGACAGGTAGCTACTCCACCAAGGCCTGCTCAAGTTAAAGTGGTGGAGGAGAGAGCAGTTTCTACTTTGCCCAAACCAAGCACTGAAGTACGTAGACCAGGAGGAAGGAGACCACTTGTTCGACCTTCACTTGAACGAGTTGAAGAACCCCAAGCTGATATTGATACAACAGTAGTTGAAGGTTCCACAGAGAAAGGCGGCTTGTTGATGGAGCGTGAAACTCCTGGTGGTGTATCTGCGTTACAGCCATCAAGTCGTAAACGTCTAATTCCATCACCACAAACGAGAGATGATGCTTCACAAGGAGAGACAACGGATGCCAATCCACCACTGAAGAAACCCAAAGAAGGATCTTCACAATGTACTAGTGAGCTAAAAACTGAACAGTCACCTCATGAAGATGTCATGGCACCTGTTCCTGTGCTACCATCTACAGAGTTAGATGAGCAACAGCCTGGAGAAGAGATGGACACCGATCAGTCTTCCTTGCCAGTTGAAGAGGTTGAGGAAACAAGGGAGGATGACTTGGGTGATAAGGATGACATGGAAACACATATAGACGCTTCAATGGACATCCAAGGACAAGATGCAGAAACTGGTATTGATAATGATGCAACTACTGTGGAAGATGTGCCAGTCAAGTCAGAAGCGGTTATGGAATCACTGGAGGAAGACCTGAAAACTGAGGATGGGAAGGAAGAGGGTCAGTTTACTGCAACCACTGATGTTGAAGATGAGAGGGAGGAGGGAGAGTTGCCAGATGAACCAGAACAACCAGACAGCACTCCCCCTGTGCTGGATGTTGGTGAGCAAGCCGGTGATTCTTTCAGGGCGGCATCTCCAGCAGGACCAACTGAAAAGAGTGATGTTGACATGCCAGAAGAAACTGGAGAAGGTGATGGTACCATGGAATCAGACCAAAGCCCTGTACCACAATCTGGTGGAGCAGATGCGTCACCGAGCCAAATGGCTGATGCGTCACCAAGCCCTGCACGTGAACCTTCTCCTAACCCAGTCCAAGCTGGTGCACCTCCTGAACAGCAGAATCCCACCCCTCCTAACCCAGTCCAAGCTGGTGCATCTTCTGAACAGCAGAATCCCGCCACTGCAGCAGAAGGTGTTGAAACTCGTAGTACCAGAACAATCAACCTAACTGAGAGAGCGAGGCAAAACCGGCAAGCCAGGATTCTTCGCTCAGCCACTCAACAGAATGCAAGGGGCCGTGGCAACCAGTCTCTTACATACAGGAAAGATGGCGGCCGAGGAACACGGGGTCGTGGTGGGCGTGGTCAGTCGTAGAGAATTTAGGTTTGTCTTTGCTCAAGCGCGGAGGCTAGTTTTTTGCAAAGGACATACTGAATCAGGGCGGCATCATATTCATTTTGTAGCACTATCAGAATTGCGAGCGTACATGTTACTCTGCTTAGACAAATTCATGTGGCTAAGCAGCGCTTATTAAAATGT ] [-] EMBL CB675995 [ AAACTGGTATTGATAATGATGCAACTACTGTGGAAGATGTGCCAGTCAAGTCAGAAGCGGTTATGGAATCACTGGAGGAAGACCTGAAAACTGAGGATGGGAAGGAAGAGGGTCAGTTTACTGCAACCACTGATGTTGAAGATGAGAGGGAGGAGGGAGAGTTGCCAGATGAACCAGAACAACCAGACAGCACTCCCCCTGTGCTGGATGTTGGTGAGCAAGCCGGTGATTCTTTCAGGGCGGCATCTCCAGCAGGACCAACTGAAAAGAGTGATGTTGACATGCCAGAAGAAACTGGAGAAGGTGATGGTACCATGGAATCAGACCAAAGCCCTGTACCACAATCTGGTGGAGCAGATGCGTCACCGAGCCAAATGGCTGATGCGTCACCAAGCCCTGCACGTGAACCTTCTCCTAACCCAGTCCAAGCTGGTGCACCTCCTGAACAGCAGAATCCCACCCCTCCTAACCCAGTCCAAGCTGGTGCATCTTCTGAACAGCAGAATCCCGCCACTGCAGCAGAAGGTGTTGAAACTCGTAGTACCAGAACAATCAACCTAACTGAGAGAGCGAGGCAAAACCGGCAAGCCAGGATTCTTCGCTCAGCCACTCAACAGAATGCAAGGGGCCGTGGCAACCAGTCTCTTACATACAGGAAAGATGGCGGCCGAGGAACACGGGGTCGTGGTGGGCGTGGTCAGTCGTAGAGAATTTAGGTTTGTCTTTGCTCAAGCGCGGAGACTAGTTTTTTGCAAAGGACATACTGAATCAGGGCGGCATCATATTCATTTTGTAGCACTATCAGA ] [-] EMBL CB671698 [ AAGAGGGTCAGTTTACTGCAACCACTGATGTTGAAGATGAGAGGGAGGAGGGAGAGTTGCCAGATGAACCAGAACAACCAGACAGCACTCCCCCTGTGCTGGATGTTGGTGAGCAAGCCGGTGATTCTTTCAGGGCGGCATCTCCAGCAGGACCAACTGAAAAGAGTGATGTTGACATGCCAGAAGAAACTGGAGAAGGTGATGGTACCATGGAATCAGACCAAAGCCCTGTACCACAATCTGGTGGAGCAGATGCGTCACCGAGCCAAATGGCTGATGCGTCACCAAGCCCTGCACGTGAACCTTCTCCTAACCCAGTCCAAGCTGGTGCACCTCCTGAACAGCAGAATCCCACCCCTCCTAACCCAGTCCAAGCTGGTGCATCTTCTGAACAGCAGAATCCCGCCACTGCAGCAGAAGGTGTTGAAACTCGTAGTACCAGAACAATCAACCTAACTGAGAGAGCGAGGCAAAACCGGCAAGCCAGGATTCTTCGCTCAGCCACTCAACAGAATGCAAGGGGCCGTGGCAACCAGTCTCTTACATACAGGAAAGATGGCGGCCGAGGAACACGGGGTCGTGGTGGGCGTGGTCAGTCGTAGAGAATTTAGGTTTGTCTTTGCTCAAGCGCGGAGACTAGTTTTTTGCAAAGGACATACTGAATCAGGGCGGCATCATATTCATTTTGTAGCACTATCAGAATTGCGAGCGTACATGTTACTCTGCTTAGACAAATTCATGTGGCTAAGCAGCGCTTATTAAAATGTTCTCATTGCCCGTGCGGATTGCC ] [-] EMBL CB656383 [ AGTTTACTGCAACCACTGATGTTGAAGATGAGAGGGAGGAGAAAGAGTTGCCAGATGAACCAGAACAACCAGACAGCACTCCCCCTGTGCTGGATGTTGGTGAGCAAGCCGGTGATTCTTTCAGGGCGGCATCTCCAGCAGGACCAACTGAAAAGAGTGATGTTGACATGCCAGAAGAAACTGGAGAAGGTGATGGTACCATGGAATCAGACCAAAGCCCTGTACCACAATCTGGTGGAGCAGATGCGTCACCGAGCCAAATGGCTGATGCGTCACCAAGCCCTGCACGTGAACCTTCTCCTAACCCAGTCCAAGCTGGTGCACCTCCTGAACAGCAGAATCCCACCCCTCCTAACCCAGTCCAAGCTGGTGCATCTTCTGAACAGCAGAATCCCGCCACTGCAGCAGAAGGTGTTGAAACTCGTAGTACCAGAACAATCAACCTAACTGAGAGAGCGAGGCAAAACCGGCAAGCCAGGATTCTTCGCTCAGCCACTCAACAGAATGCAAGGGGCCGTGGCAACCAGTCTCTTACATACAGGAAAGATGGCGGCCGAGGAACACGGGGTCGTGGTGGGCGTGGTCAGTCGTAGAGAATTTAGGTTTGTCTTTGCTCAAGCGCGGAGACTAGTTTTTTGCAAAGGACATACTGAATCAGGGCGGCATCATATTCATTTTGTAGCACTATCAGAATTGCGAGCGTACATGTTACTCTGCTTAGACAAATTCATGTGGCTAAGCAGCGCTTATTAAAATGTTCTCATTGCCCGTGCGGATTGCCAGATGACCTATATTTAAATTGAACTCTAGTTGACAAAGA] [+] EMBL CA756603 [ ACCACTGATGTTGAAGATGAGAGGGAGGAGGGAGAGTTGCCAGATGAACCAGAACAACCAGACAGCACTCCCCCTGTGCTGGATGTTGGTGAGCAAGCCGGTGATTCTTTCAGGGCGGCATCTCCAGCAGGACCAACTGAAAAGAGTGATGTTGACATGCCAGAAGAAACTGGAGAAGGTGATGGTACCATGGAATCAGACCAAAGCCCTGTACCACAATCTGGTGGAGCAGATGCGTCACCGAGCCAAATGGCTGATGCGTCACCAAGCCCTGCACGTGAACCTTCTCCTAACCCAGTCCAAGCTGGTGCACCTCCTGAACAGCAGAATCCCACCCCTCCTAACCCAGTCCAAGCTGGTGCATCTTCTGAACAGCAGAATCCCGCCACTGCAGCAGAAGGTGTTGAAACTCGTAGTACCAGAACAATCAACCTAACTGAGAGAGCGAGGCAAAACCGGCAAGCCAGGATTCTTCGCTCAGCCACTCAACAGAATGCAAGGGGCCGTGGCAACCAGTCTCTTACATACAGGANAGATGGCGGCCGAGGAACACGGNGTCGTGGTGGGCGTGGTCAGTCGTAGAGAATTTAGGTTTGTCTTTGCTCAAGCGCGG ] [-] EMBL CB631692 [ GATGAGAGGGAGGAGGGAGAGTTGCCAGATGAACCAGAACAACCAGACAGCACTCCCCCTGTGCTGGATGTTGGTGAGCAAGCCGGTGATTCTTTCAGGGCGGCATCTCCAGCAGGACCAACTGAAAAGAGTGATGTTGACATGCCAGAAGAAACTGGAGAAGGTGATGGTACCATGGAATCAGACCAAAGCCCTGTACCACAATCTGGTGGAGCAGATGCGTCACCGAGCCAAATGGCTGATGCGTCACCAAGCCCTGCACGTGAACCTTCTCCTAACCCAGTCCAAGCTGGTGCACCTCCTGAACAGCAGAATCCCACCCCTCCTAACCCAGTCCAAGCTGGTGCATCTTCTGAACAGCAGAATCCCGCCACTGCAGCAGAAGGTGTTGAAACTCGTAGTACCAGAACAATCAACCTAACTGAGAGAGCGAGGCAAAACCGGCAAGCCAGGATTCTTCGCTCAGCCACTCAACAGAATGCAAGGGGCCGTGGCAACCAGTCTCTTACATACAGGAAAGATGGCGGCCGAGGAACACGGGGTCGTGGTGGGCGTGGTCAGTCGTAGAGAATTTAGGTTTGTCTTTGCTCAAGCGCGGAGACTAGTTTTTTGC AAGGACATACTGAATCAGGACGGCATCATATTCATTTTGTAGCACTATCAGAATTGCGAGCGTACATGTTACTCTGCTTAGACAAATTCATGTGGCTAAGCAGCGCGTATTAAAATGTTCTCATTGCCCGTGCGGATTG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||