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Oryza sativa
cluster # 8923 cluster # 8923       Sequences # 6       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8923#0 length = 988 sequences # 1  
consensus_8923#1 length = 798 sequences # 1  
consensus_8923#2 length = 513 sequences # 1  
consensus_8923#3 length = 491 sequences # 2  
consensus_8923#4 length = 471 sequences # 1  

consensusID : consensus_8923#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 988
fasta sequence
                              [TATGGAACTTAGTATGGTTCAGGTTTTGTAAACCAATTGTTGCTGATAAATCATCAGAATCTCCCAAGAATTCATCGAAATCTCCCGAGAAATCATCCATCCATCCTCTACGTTCCCGATCCACCGATGGACCTGGACCTGGACCGCAAGCAAATCAAGCGTTGCGTCGTCGCCTTCCTGCCGCCGCCGGAGGAGGAGGATGCCGGTGAGGAGATCCGTGTGGTGCCGTGCCCTGCCGCTGCTGCGGAGGAGGAGAGGCGGCGATCTTCCAAGAGGAAGGGGAAGAGGTGCGCCTCCAATGGAAGCAAGCCTGCGGGGACGCTGGTGCCGGCCGACGGCGAGGAGATGATCCTCGTCCCGCCCGGGAAGCTCGCGCTGTCCAAGAATCTGGTCGACAAGATCCTCTCCCTGGAGAGGATGGAGCTGCCCCACGTCGCCGACATCGTCGACGACGGCAACCCGAACCCGTCAGAGGCGGACAAGGCGCTCAGGAGGTGCGTGCTCGACCTGGACAGGGACAACAAGAGGCACCAGGACAAGCTCGCCGCGTGCCAGGCGATCATACGGAGCGTTCGCCATGGCAAGGGCTACGCCGTCGTCGACAACCGCCTCGACTTCAGGGTCGCCGTGTGCAGGGCCGAGGGCGTCTTCCTGCTCCCCTGCCATATCGCCGATCTTATCCCCGTGGGATTTGATCTTGTCTCCAATTGAGTACTCCCTCCATCATAAAATTTTTATAGCAATCTTATAACGGATGTTCTACTACAACAAATCCTAGTATATTCAGATTCGTTGTACTGGATGGATACATTCTAGGACAATAAATCGGTTGCCATATTTTGAGACGGAGAGATAAAGGTATTTTGGGTGAACGTGACATATTCTAAGACAATAAAGCTAGACAAATTCTCTTACCAGATTTATTGTACTAATGTGACATATGCACCTAAAATTTCTTATAATTTTCACAATGAATGCAACTAAATGT]

[+] EMBL AK107101             [TATGGAACTTAGTATGGTTCAGGTTTTGTAAACCAATTGTTGCTGATAAATCATCAGAATCTCCCAAGAATTCATCGAAATCTCCCGAGAAATCATCCATCCATCCTCTACGTTCCCGATCCACCGATGGACCTGGACCTGGACCGCAAGCAAATCAAGCGTTGCGTCGTCGCCTTCCTGCCGCCGCCGGAGGAGGAGGATGCCGGTGAGGAGATCCGTGTGGTGCCGTGCCCTGCCGCTGCTGCGGAGGAGGAGAGGCGGCGATCTTCCAAGAGGAAGGGGAAGAGGTGCGCCTCCAATGGAAGCAAGCCTGCGGGGACGCTGGTGCCGGCCGACGGCGAGGAGATGATCCTCGTCCCGCCCGGGAAGCTCGCGCTGTCCAAGAATCTGGTCGACAAGATCCTCTCCCTGGAGAGGATGGAGCTGCCCCACGTCGCCGACATCGTCGACGACGGCAACCCGAACCCGTCAGAGGCGGACAAGGCGCTCAGGAGGTGCGTGCTCGACCTGGACAGGGACAACAAGAGGCACCAGGACAAGCTCGCCGCGTGCCAGGCGATCATACGGAGCGTTCGCCATGGCAAGGGCTACGCCGTCGTCGACAACCGCCTCGACTTCAGGGTCGCCGTGTGCAGGGCCGAGGGCGTCTTCCTGCTCCCCTGCCATATCGCCGATCTTATCCCCGTGGGATTTGATCTTGTCTCCAATTGAGTACTCCCTCCATCATAAAATTTTTATAGCAATCTTATAACGGATGTTCTACTACAACAAATCCTAGTATATTCAGATTCGTTGTACTGGATGGATACATTCTAGGACAATAAATCGGTTGCCATATTTTGAGACGGAGAGATAAAGGTATTTTGGGTGAACGTGACATATTCTAAGACAATAAAGCTAGACAAATTCTCTTACCAGATTTATTGTACTAATGTGACATATGCACCTAAAATTTCTTATAATTTTCACAATGAATGCAACTAAATGT]


>consensus_8923#0 TATGGAACTTAGTATGGTTCAGGTTTTGTAAACCAATTGTTGCTGATAAATCATCAGAAT CTCCCAAGAATTCATCGAAATCTCCCGAGAAATCATCCATCCATCCTCTACGTTCCCGAT CCACCGATGGACCTGGACCTGGACCGCAAGCAAATCAAGCGTTGCGTCGTCGCCTTCCTG CCGCCGCCGGAGGAGGAGGATGCCGGTGAGGAGATCCGTGTGGTGCCGTGCCCTGCCGCT GCTGCGGAGGAGGAGAGGCGGCGATCTTCCAAGAGGAAGGGGAAGAGGTGCGCCTCCAAT GGAAGCAAGCCTGCGGGGACGCTGGTGCCGGCCGACGGCGAGGAGATGATCCTCGTCCCG CCCGGGAAGCTCGCGCTGTCCAAGAATCTGGTCGACAAGATCCTCTCCCTGGAGAGGATG GAGCTGCCCCACGTCGCCGACATCGTCGACGACGGCAACCCGAACCCGTCAGAGGCGGAC AAGGCGCTCAGGAGGTGCGTGCTCGACCTGGACAGGGACAACAAGAGGCACCAGGACAAG CTCGCCGCGTGCCAGGCGATCATACGGAGCGTTCGCCATGGCAAGGGCTACGCCGTCGTC GACAACCGCCTCGACTTCAGGGTCGCCGTGTGCAGGGCCGAGGGCGTCTTCCTGCTCCCC TGCCATATCGCCGATCTTATCCCCGTGGGATTTGATCTTGTCTCCAATTGAGTACTCCCT CCATCATAAAATTTTTATAGCAATCTTATAACGGATGTTCTACTACAACAAATCCTAGTA TATTCAGATTCGTTGTACTGGATGGATACATTCTAGGACAATAAATCGGTTGCCATATTT TGAGACGGAGAGATAAAGGTATTTTGGGTGAACGTGACATATTCTAAGACAATAAAGCTA GACAAATTCTCTTACCAGATTTATTGTACTAATGTGACATATGCACCTAAAATTTCTTAT AATTTTCACAATGAATGCAACTAAATGT



consensusID : consensus_8923#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 798
fasta sequence
                              [GGTGCGTGCTCGACCTGGACAGGGACAACAAGAGGCACCAGGACAAGCTCGCCGCGTGCCAGGCGATCATACGGAGCGTTCGCCATGGCAAGGGCTACGCCGTCGTCGATAACCGCCTCGACTTCAGGGTCGCCGTGTGCAGGGCCGAGGGCGTCTTCCTGCTCCCCTGCCATGTCGCCGATCTTATCCCCGTGGGATTTGATCTTGTCTCCAATTGAGTACTCCCTCCATCATAAAATTTTTATAGCAATCTTACACCGGATGTTCTACTACAACAAATCCTAGATGTCTTAGTACAACAAATCGGACAGTAGTATATTCAGATTCGTTGTACTGGATGGACACATCCTAGGACAATAAATCGGTTGCCATATTTTGGGACGGATGGAACAAAGTATTTTGGGTGAACGTGACATATTCTAAGACAATAAAGCTAGACAAATTCTCTTACCAGATTTATTGGACAAATGTGACATATGCACCTAAAATTTCTTATATTTTTCACAATGAATGCAACTAAATCTTGACAAGACAAGGATGCGTATTTCCATTTACTAGTACATGGTCTTCTTAAGTACCACGATTTGTTAACATAACATGGCACCCATGACAAACAATGGGAAGAAATCCCACATCATGAAGTAAACAAACACTTTTGGCCCTGNTTTTTTTTCTNCAATAAAAAATTAGATTAAATTTTAGATACTTGNGGCACGCTTTTTAAATTGGTAAACAGGGNGGTTTCGTATAAAACTTTATATATGAAAGNTGGTCTAAATATAAGATTAATCCATTTAT]

[+] EMBL CA766797             [GGTGCGTGCTCGACCTGGACAGGGACAACAAGAGGCACCAGGACAAGCTCGCCGCGTGCCAGGCGATCATACGGAGCGTTCGCCATGGCAAGGGCTACGCCGTCGTCGATAACCGCCTCGACTTCAGGGTCGCCGTGTGCAGGGCCGAGGGCGTCTTCCTGCTCCCCTGCCATGTCGCCGATCTTATCCCCGTGGGATTTGATCTTGTCTCCAATTGAGTACTCCCTCCATCATAAAATTTTTATAGCAATCTTACACCGGATGTTCTACTACAACAAATCCTAGATGTCTTAGTACAACAAATCGGACAGTAGTATATTCAGATTCGTTGTACTGGATGGACACATCCTAGGACAATAAATCGGTTGCCATATTTTGGGACGGATGGAACAAAGTATTTTGGGTGAACGTGACATATTCTAAGACAATAAAGCTAGACAAATTCTCTTACCAGATTTATTGGACAAATGTGACATATGCACCTAAAATTTCTTATATTTTTCACAATGAATGCAACTAAATCTTGACAAGACAAGGATGCGTATTTCCATTTACTAGTACATGGTCTTCTTAAGTACCACGATTTGTTAACATAACATGGCACCCATGACAAACAATGGGAAGAAATCCCACATCATGAAGTAAACAAACACTTTTGGCCCTGNTTTTTTTTCTNCAATAAAAAATTAGATTAAATTTTAGATACTTGNGGCACGCTTTTTAAATTGGTAAACAGGGNGGTTTCGTATAAAACTTTATATATGAAAGNTGGTCTAAATATAAGATTAATCCATTTAT]


>consensus_8923#1 GGTGCGTGCTCGACCTGGACAGGGACAACAAGAGGCACCAGGACAAGCTCGCCGCGTGCC AGGCGATCATACGGAGCGTTCGCCATGGCAAGGGCTACGCCGTCGTCGATAACCGCCTCG ACTTCAGGGTCGCCGTGTGCAGGGCCGAGGGCGTCTTCCTGCTCCCCTGCCATGTCGCCG ATCTTATCCCCGTGGGATTTGATCTTGTCTCCAATTGAGTACTCCCTCCATCATAAAATT TTTATAGCAATCTTACACCGGATGTTCTACTACAACAAATCCTAGATGTCTTAGTACAAC AAATCGGACAGTAGTATATTCAGATTCGTTGTACTGGATGGACACATCCTAGGACAATAA ATCGGTTGCCATATTTTGGGACGGATGGAACAAAGTATTTTGGGTGAACGTGACATATTC TAAGACAATAAAGCTAGACAAATTCTCTTACCAGATTTATTGGACAAATGTGACATATGC ACCTAAAATTTCTTATATTTTTCACAATGAATGCAACTAAATCTTGACAAGACAAGGATG CGTATTTCCATTTACTAGTACATGGTCTTCTTAAGTACCACGATTTGTTAACATAACATG GCACCCATGACAAACAATGGGAAGAAATCCCACATCATGAAGTAAACAAACACTTTTGGC CCTGNTTTTTTTTCTNCAATAAAAAATTAGATTAAATTTTAGATACTTGNGGCACGCTTT TTAAATTGGTAAACAGGGNGGTTTCGTATAAAACTTTATATATGAAAGNTGGTCTAAATA TAAGATTAATCCATTTAT



consensusID : consensus_8923#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 513
fasta sequence
                              [GAGGCGGACAAGGCGCTCAGGAGGTGCGTGCTCGACCTGGACAGGGACAACAGGAGGCACCAGGACAAGCTCGCCGCGTGCCAGGCGACCATACGGCGCGTCCGCCATTGCAAGGGCTACGCCGTCGTCGACAACCNGCCTCGCTTCAGGGTCGCCGTGTGCAGGGCCGAGGGCGTCTTCCTGCTCCCCTGCCATATCGCCGATCTTATCCCCGTCGGATTTGATCTTGTCTCCAATTGAGCATATAGTTTAGTGGTCTATTAGGTTAATTCGACTGTCTACTGTACCTATCTGTAGCTATATACTACCTCCGTTCTCCGTTTCAGGATATAAGACTTTCTAATATTGCTCACATTCATATAGATGTTAATGAATCTAAGTACATATATATGTTTAGATTCATTAATATGGACAATGCTAAAAAGTCTTATAATATGAAACGGAGGAAGTATCTATCATCTATGTGATTTGTCAGTTCATTACTTATGCAGACAAGCTGGAACCTTAAAAAAA]

[-] EMBL CF297527             [GAGGCGGACAAGGCGCTCAGGAGGTGCGTGCTCGACCTGGACAGGGACAACAGGAGGCACCAGGACAAGCTCGCCGCGTGCCAGGCGACCATACGGCGCGTCCGCCATTGCAAGGGCTACGCCGTCGTCGACAACCNGCCTCGCTTCAGGGTCGCCGTGTGCAGGGCCGAGGGCGTCTTCCTGCTCCCCTGCCATATCGCCGATCTTATCCCCGTCGGATTTGATCTTGTCTCCAATTGAGCATATAGTTTAGTGGTCTATTAGGTTAATTCGACTGTCTACTGTACCTATCTGTAGCTATATACTACCTCCGTTCTCCGTTTCAGGATATAAGACTTTCTAATATTGCTCACATTCATATAGATGTTAATGAATCTAAGTACATATATATGTTTAGATTCATTAATATGGACAATGCTAAAAAGTCTTATAATATGAAACGGAGGAAGTATCTATCATCTATGTGATTTGTCAGTTCATTACTTATGCAGACAAGCTGGAACCTTAAAAAAA]


>consensus_8923#2 GAGGCGGACAAGGCGCTCAGGAGGTGCGTGCTCGACCTGGACAGGGACAACAGGAGGCAC CAGGACAAGCTCGCCGCGTGCCAGGCGACCATACGGCGCGTCCGCCATTGCAAGGGCTAC GCCGTCGTCGACAACCNGCCTCGCTTCAGGGTCGCCGTGTGCAGGGCCGAGGGCGTCTTC CTGCTCCCCTGCCATATCGCCGATCTTATCCCCGTCGGATTTGATCTTGTCTCCAATTGA GCATATAGTTTAGTGGTCTATTAGGTTAATTCGACTGTCTACTGTACCTATCTGTAGCTA TATACTACCTCCGTTCTCCGTTTCAGGATATAAGACTTTCTAATATTGCTCACATTCATA TAGATGTTAATGAATCTAAGTACATATATATGTTTAGATTCATTAATATGGACAATGCTA AAAAGTCTTATAATATGAAACGGAGGAAGTATCTATCATCTATGTGATTTGTCAGTTCAT TACTTATGCAGACAAGCTGGAACCTTAAAAAAA



consensusID : consensus_8923#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 491
fasta sequence
                              [GAAGCGTTTTAGGGTTTCGAATTCCCCAATTTTGTTCCAAGAGCTCCAAACACAAGAAGAGAAATCCCCCATTGTTGCTGAGAAGGTCGTCGAGATCTCATCCACCGATGGACCTGGACCTGGACCGCGAGCAAATCAAGCGTTGCGTCGTCGCCTTCCTGCCGCCGCCGGAGGAGGAGGATGCCGGTGAGGAGATCCGTGTGGTGCCGTGCCCTGCCGCTGCTGCGGAGGAGGAGAGGCGGCGATCTTCCAAGAGGAAGGG-GAAGAGGTGCGCCTCCAAGGGAAGCAAGCCTGCGGGGACGCTGGTGCCGGCCGACGGCGAGGAGATGATCCTGGTCCCGCCCGGGAAGTTCGCGCTGTCCAAGAATCTGGTCGACAAGATCCTCTCCCTGGAGAGGATGGAGCTGCCCCACGTCGCCGACATCGTC-GACGACGGCAACCCGAACCCGTCGGAGGCGGACAAGGCGCTCAGGAGGTGCGTGCTCGACCTG]

[+] EMBL CF297526             [GAAGCGTTTTAGGGTTTCGAATTCCCCAATTTTGTTCCAAGAGCTCCAAACACAAGAAGAGAAATCCCCCATTGTTGCTGAGAAGGTCGTCGAGATCTCATCCACCGATGGACCTGGACCTGGACCGCGAGCAAATCAAGCGTTGCGTCGTCGCCTTCCTGCCGCCGCCGGAGGAGGAGGATGCCGGTGAGGAGATCCGTGTGGTGCCGTGCCCTGCCGCTGCTGCGGAGGAGGAGAGGCGGCGATCTTCCAAGAGGAAGGG GAAGAGGTGCGCCTCCAAGGGAAGCAAGCCTGCGGGGACGCTGGTGCCGGCCGACGGCGAGGAGATGATCCTGGTCCCGCCCGGGAAGTTCGCGCTGTCCAAGAATCTGGTCGACAAGATCCTCTCCCTGGAGAGGATGGAGCTGCCCCACGTCGCCGACATCGTC GACGACGGCAACCCGAACCCGTCGGAGGCGGACAAGGCGCTCAGGAGGTGCGTGCTCGACCTG]
[+] EMBL CF337020             [  AGCGTTTTAGGGTTTCGAATTCCCCAATTTTGTTCCAAGAGCTCCAAACACAAGAAGAGAAATCCCCCATTGTTGCTGAGAAGGTCGTCGAGATCTCATCCACCGATGGACCTGGACCTGGACCGCGAGCAAATCAAGCGTTGCGTCGTCGCCTTCCTGCCGCCGCCGGAGGAGGAGGATGCCGGTGAGGAGATCCGTGTGGTGCCGTGCCCTGCCGCTGCTGCGGAGGAGGAGAGGCGGCGATCTTCCAAGAGGAAGGGNGAAGAGGTGCGCCTCCAAGGGAAGCAAGCCTGCGGGGACGCTGGTGCCGGCCGACGGCGAGGAGATGATCCTGGTCCCGCCCGGGAAGTTCGCGCTGTCCAAGAATCTGGTCGACAAGATCCTCTCCCTGGAGAGGATGGAGCCGCCCCACGTCGCCGACATCGTCGGACGACGGCAACCCGAACCCGTCGGAGGCG                                 ]


>consensus_8923#3 GAAGCGTTTTAGGGTTTCGAATTCCCCAATTTTGTTCCAAGAGCTCCAAACACAAGAAGA GAAATCCCCCATTGTTGCTGAGAAGGTCGTCGAGATCTCATCCACCGATGGACCTGGACC TGGACCGCGAGCAAATCAAGCGTTGCGTCGTCGCCTTCCTGCCGCCGCCGGAGGAGGAGG ATGCCGGTGAGGAGATCCGTGTGGTGCCGTGCCCTGCCGCTGCTGCGGAGGAGGAGAGGC GGCGATCTTCCAAGAGGAAGGGGAAGAGGTGCGCCTCCAAGGGAAGCAAGCCTGCGGGGA CGCTGGTGCCGGCCGACGGCGAGGAGATGATCCTGGTCCCGCCCGGGAAGTTCGCGCTGT CCAAGAATCTGGTCGACAAGATCCTCTCCCTGGAGAGGATGGAGCTGCCCCACGTCGCCG ACATCGTCGACGACGGCAACCCGAACCCGTCGGAGGCGGACAAGGCGCTCAGGAGGTGCG TGCTCGACCTG



consensusID : consensus_8923#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 471
fasta sequence
                              [ATACGGGGGGTCCGCCATTGCAAGGGTTACGCCGTTGTTGACAACCCGCCTCGACTTCAGGGTCCCCGTGTGCAGGGCCAAGGGGGTTTTCCTGCTCCCCTGCCAAATCGCCGATTTTATCCCCGTCGGATTTGATTTTGTTTCCAATTGAGCAAATAGTTTAGTGGTCTATTAGGTTAATTCGACTGTTTACTGTACCTATCTGTAGCTATATACTACCCCCGTTTTCCGTTTCAGGATATAAGACTTTTTAATATTGCTCCCATTCATATAGATGTTAATGAATTTAAGGACAAATATATGTTTAGATTCATTAAAAAGGACAATGGTAAAAAGTTTTATAATATGAAACGGAGGAAGGATCTATCATCTATGTGATTTGTCAGTTAATTACTTATGCAGACAAGCTGGAACCTTATTTATGGTTACTTTGACTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CF317561             [ATACGGGGGGTCCGCCATTGCAAGGGTTACGCCGTTGTTGACAACCCGCCTCGACTTCAGGGTCCCCGTGTGCAGGGCCAAGGGGGTTTTCCTGCTCCCCTGCCAAATCGCCGATTTTATCCCCGTCGGATTTGATTTTGTTTCCAATTGAGCAAATAGTTTAGTGGTCTATTAGGTTAATTCGACTGTTTACTGTACCTATCTGTAGCTATATACTACCCCCGTTTTCCGTTTCAGGATATAAGACTTTTTAATATTGCTCCCATTCATATAGATGTTAATGAATTTAAGGACAAATATATGTTTAGATTCATTAAAAAGGACAATGGTAAAAAGTTTTATAATATGAAACGGAGGAAGGATCTATCATCTATGTGATTTGTCAGTTAATTACTTATGCAGACAAGCTGGAACCTTATTTATGGTTACTTTGACTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_8923#4 ATACGGGGGGTCCGCCATTGCAAGGGTTACGCCGTTGTTGACAACCCGCCTCGACTTCAG GGTCCCCGTGTGCAGGGCCAAGGGGGTTTTCCTGCTCCCCTGCCAAATCGCCGATTTTAT CCCCGTCGGATTTGATTTTGTTTCCAATTGAGCAAATAGTTTAGTGGTCTATTAGGTTAA TTCGACTGTTTACTGTACCTATCTGTAGCTATATACTACCCCCGTTTTCCGTTTCAGGAT ATAAGACTTTTTAATATTGCTCCCATTCATATAGATGTTAATGAATTTAAGGACAAATAT ATGTTTAGATTCATTAAAAAGGACAATGGTAAAAAGTTTTATAATATGAAACGGAGGAAG GATCTATCATCTATGTGATTTGTCAGTTAATTACTTATGCAGACAAGCTGGAACCTTATT TATGGTTACTTTGACTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8923#2      GAGGCGGACAAGGCGCTCAGGAGGTGCGTGCTCGACCTGGACAGGGACAACAGGAGGCAC 60
consensus_8923#4      ------------------------------------------------------------
consensus_8923#1      ----------------------GGTGCGTGCTCGACCTGGACAGGGACAACAAGAGGCAC 38
consensus_8923#0      -------------------TATGGAACTTAGTATGGTTCAG-GTTTTGTAAACCAATTGT 40
consensus_8923#3      ----------------------GAAGCGTTTTAGGGTTTCG-AATTCC----CCAATT-T 32
                                                                                  

consensus_8923#2      CAGGACAAGCTCGCCGCGTGCCAGGCGACCATACGGCGCGTCCGCCATTGCAAGGGCTAC 120
consensus_8923#4      ------------------------------ATACGGGGGGTCCGCCATTGCAAGGGTTAC 30
consensus_8923#1      CAGGACAAGCTCGCCGCGTGCCAGGCGATCATACGGAGCGTTCGCCATGGCAAGGGCTAC 98
consensus_8923#0      TGCTGATAAATCATCAGAATCTCCCAAGAATTCATCGAAATCTCCCGAGAAATCATCCAT 100
consensus_8923#3      TGTTCCAAGAGCTCCAAA----CACAAGA----AGAGAAATCCCCCATTG--TTGCTGAG 82
                                                              *   **            * 

consensus_8923#2      GCCGTCGTCGACAACCNGCCTCG-CTTCAGGGTCGCCGTGTGCAGGGCCGAGGGCGTCTT 179
consensus_8923#4      GCCGTTGTTGACAACCCGCCTCGACTTCAGGGTCCCCGTGTGCAGGGCCAAGGGGGTTTT 90
consensus_8923#1      GCCGTCGTCGATAACC-GCCTCGACTTCAGGGTCGCCGTGTGCAGGGCCGAGGGCGTCTT 157
consensus_8923#0      CCATCCTCTACGTTCCCGATCCACCGATGGA----CCTGGACCTGGACCGCAAGCAAATC 156
consensus_8923#3      AAGGTCGTCGAGATCTC-ATCCACCGATGGA----CCTGGACCTGGACCGCGAGCAAATC 137
                                    *      *  *    *     **  *  * ** **    *    * 

consensus_8923#2      CCTGCTCCCCTGCCATATCGCCGATCTTATCCCCGTCGGATTTGATCTTGTCTCCAATTG 239
consensus_8923#4      CCTGCTCCCCTGCCAAATCGCCGATTTTATCCCCGTCGGATTTGATTTTGTTTCCAATTG 150
consensus_8923#1      CCTGCTCCCCTGCCATGTCGCCGATCTTATCCCCGTGGGATTTGATCTTGTCTCCAATTG 217
consensus_8923#0      A----AGCGTTGCGTCGTCGCCT-TCCTGCCGCCGCCGGAG--GAGGAGGATGCCGGTGA 209
consensus_8923#3      A----AGCGTTGCGTCGTCGCCT-TCCTGCCGCCGCCGGAG--GAGGAGGATGCCGGTGA 190
                             *  ***    *****  *  *  * ***  ***   **    *   **  *  

consensus_8923#2      AGCA-----TATAGTTTAGTGGTCTATTAGG----TTAATTCGACTGTC-TACTGTACCT 289
consensus_8923#4      AGCA-----AATAGTTTAGTGGTCTATTAGG----TTAATTCGACTGTT-TACTGTACCT 200
consensus_8923#1      AGTACTCCCTCCATCATAAAATTTTTATAGCAATCTTACACCGGATGTTCTACTACAACA 277
consensus_8923#0      GGAGATCCGTGTGGTGCCGTGCCCTGCCGC------TGCTGCGGAGGAGGAGAGGCGGCG 263
consensus_8923#3      GGAGATCCGTGTGGTGCCGTGCCCTGCCGC------TGCTGCGGAGGAGGAGAGGCGGCG 244
                       *                      *           *    **   *           * 

consensus_8923#2      ATCTGTAGCTATATACTACCTCCGTTCTCCGTTTCAGGATATAAGACTTTCTA--ATATT 347
consensus_8923#4      ATCTGTAGCTATATACTACCCCCGTTTTCCGTTTCAGGATATAAGACTTTTTA--ATATT 258
consensus_8923#1      AATCCTAGATGTCTTAGTACAACAAATCGGACAGTAGTATATTCAGATTCGTT--GTACT 335
consensus_8923#0      ATCTTCCAAGAGGAAGGGGAAGAGGTGCGCCTCCAATGGAAGCAAGCCTGCGGGGACGCT 323
consensus_8923#3      ATCTTCCAAGAGGAAGGGGAAGAGGTGCGCCTCCAAGGGAAGCAAGCCTGCGGGGACGCT 304
                      *                                  *    *       *          *

consensus_8923#2      GCTCACATTCATATAGATGTTAATGAATCTAAGTACATATATATGTTTAGATTCATTAAT 407
consensus_8923#4      GCTCCCATTCATATAGATGTTAATGAATTTAAGGACAAATATATGTTTAGATTCATTAAA 318
consensus_8923#1      GGATGGACACATCCT-AGGACAATAAATCGGTTGCCATATTTTGGGACGGATGGAACAAA 394
consensus_8923#0      GGTGCCGGCCGACGGCGAGGAGATGATCCTCGTCCCGCCCGGGAAGCTCGCGCTGTCCAA 383
consensus_8923#3      GGTGCCGGCCGACGGCGAGGAGATGATCCTGGTCCCGCCCGGGAAGTTCGCGCTGTCCAA 364
                      *        *        *   ** *         *             *        * 

consensus_8923#2      AT-----GGACAATGCTAAAAAGTCTTATAATATGAAACGGAGGAAGTATCTATCATCTA 462
consensus_8923#4      AA-----GGACAATGGTAAAAAGTTTTATAATATGAAACGGAGGAAGGATCTATCATCTA 373
consensus_8923#1      GTATTTTGGGTGAACGTGACATATTCTAAGACAATAAAGCTAGACAAATTCTCTTACCAG 454
consensus_8923#0      GAATCT-GGTCGACAAGATCCTCTCCCTGGAGA--GGATGGAGCTGCCCCACGTCGCCGA 440
consensus_8923#3      GAATCT-GGTCGACAAGATCCTCTCCCTGGAGA--GGATGGAGCTGCCCCACGTCGCCGA 421
                             **   *          *      * *    *   **          *   *  

consensus_8923#2      TGTGATTTGTCAGTTCATTACTTATGCAGACAAG--CTGGAACCTTAAAAAAA------- 513
consensus_8923#4      TGTGATTTGTCAGTTAATTACTTATGCAGACAAG--CTGGAACCTTATTTATGGTTACTT 431
consensus_8923#1      ATTTATTGGACAAAT-GTGACATATGCACCTAAAATTTCTTATATTTTTCACAATGAATG 513
consensus_8923#0      CATCGTCGACGACGGCAACCCGAACCCGTCAGAGG-CGGACAAGGCGCTCAGGAGGTGCG 499
consensus_8923#3      CATCGTCGACGACGGCAACCCGAACCCGTCGGAGG-CGGACAAGGCGCTCAGGAGGTGCG 480
                        *  *     *        *  *  *     *        *        *         

consensus_8923#2      ------------------------------------------------------------
consensus_8923#4      TGACTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-------------------- 471
consensus_8923#1      CAACTAAATCTTGACAAGACAAGGATGCGTATTTCCATTTACTAGTACATGGTCTTCTTA 573
consensus_8923#0      TGCTCGACCTGGACAGGGACAACAAGAGGCACCAGGACAAGCTCGCCGCGTGCCAGGCGA 559
consensus_8923#3      TGCTCGACCTG------------------------------------------------- 491
                                                                                  

consensus_8923#2      ------------------------------------------------------------
consensus_8923#4      ------------------------------------------------------------
consensus_8923#1      AGTACCACGATTTGTTAACATAACATGGCACCCATGACAAACAATGGGAAGAAATCCCAC 633
consensus_8923#0      TCATACGGAGCGTTCGCCATGGCAAGGGCTACGCCGTCGTCGACAACCGCCTCGACTTCA 619
consensus_8923#3      ------------------------------------------------------------
                                                                                  

consensus_8923#2      ------------------------------------------------------------
consensus_8923#4      ------------------------------------------------------------
consensus_8923#1      ATCATGAAGTAAACAAACACTTTTGGCCCTGNTTTTTTTTCTNCAATAAAAAATTAGATT 693
consensus_8923#0      GGGTCGCCGTGTGCAGGGCCGAGGGCGTCTTCCTGCTCCCCTGCCATATCGCCGATCTTA 679
consensus_8923#3      ------------------------------------------------------------
                                                                                  

consensus_8923#2      ------------------------------------------------------------
consensus_8923#4      ------------------------------------------------------------
consensus_8923#1      AAATTTTAGATACTTGNGGCACGCTTTTTAAATTGGTAAACAGGGNGGTTTCGTATAAAA 753
consensus_8923#0      TCCCCGTGGGATTTGATCTTGTCTCCAATTGAGTACTCCCTCCATCATAAAATTTTTATA 739
consensus_8923#3      ------------------------------------------------------------
                                                                                  

consensus_8923#2      ------------------------------------------------------------
consensus_8923#4      ------------------------------------------------------------
consensus_8923#1      CTTTATATATGAAAGNTGGTCTAAATATAAGATTAATCCATTTAT--------------- 798
consensus_8923#0      GCAATCTTATAACGGATGTTCTACTACAACAAATCCTAGTATATTCAGATTCGTTGTACT 799
consensus_8923#3      ------------------------------------------------------------
                                                                                  

consensus_8923#2      ------------------------------------------------------------
consensus_8923#4      ------------------------------------------------------------
consensus_8923#1      ------------------------------------------------------------
consensus_8923#0      GGATGGATACATTCTAGGACAATAAATCGGTTGCCATATTTTGAGACGGAGAGATAAAGG 859
consensus_8923#3      ------------------------------------------------------------
                                                                                  

consensus_8923#2      ------------------------------------------------------------
consensus_8923#4      ------------------------------------------------------------
consensus_8923#1      ------------------------------------------------------------
consensus_8923#0      TATTTTGGGTGAACGTGACATATTCTAAGACAATAAAGCTAGACAAATTCTCTTACCAGA 919
consensus_8923#3      ------------------------------------------------------------
                                                                                  

consensus_8923#2      ------------------------------------------------------------
consensus_8923#4      ------------------------------------------------------------
consensus_8923#1      ------------------------------------------------------------
consensus_8923#0      TTTATTGTACTAATGTGACATATGCACCTAAAATTTCTTATAATTTTCACAATGAATGCA 979
consensus_8923#3      ------------------------------------------------------------
                                                                                  

consensus_8923#2      ---------
consensus_8923#4      ---------
consensus_8923#1      ---------
consensus_8923#0      ACTAAATGT 988
consensus_8923#3      ---------
                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)