These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8926#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1017 fasta sequence [CACACAGGTTAAGTCACTTTCACCTGCAAATCCACAAGCACATTGCTCGATCACCGAGGAAGAAAACTAGCTAGCTTAATCA-CCGGGAAGAGTTGAGCAATGGCGGCAGGATTGCAGGTGTTCGGCCAGCCGGCGTCCACCGACGTCGCGAGGGTCCTGACCTGTCTCTTCGAGAAGAACCTCGAGTTCGAGCTCATCCGCATAGACACCTTCAAGAAGGAGCACAAGCTCCCCGAGTTCATCAAGCTACGGGATCCGACCGGGCAGGTGACTTTCAAGCATGGCGACAAGACTCTTGTTGATTCAAGAGCGATATGCCGATACCTGAGCACTCAGTTCCCAGACGACGGGAACAGGACGATCTACGGGACGGGGTCGCTGGAGCGGGCGTCGATCGAGCAGTGGCT-GCAGGCGGAGGCGCAGAGCTTCGACGCGCCGAGC-TCGGAGCTGGT-GTTCCACCTGGCGTTCGCGCCGCAGC-TCAACATACC-GGCCGACGAGGCCCGCATCGCGGAGAACGAGC-GGAAGCTGC-AGC-AG-ATGCTGAACGTGTACGACGAGATCCTGGCGAAGAACAAGTACCTCGCCGGCGACGAGTTCACCCTGGCCGACCTGTCCCACCTCCCGAACTCCCACTACATCGTCAACGCGCGGTCGCCGAGGGGCAAGAAGCTCTTCACCTCCAAGAAGCACGTCGCGAGGTGGTACGAGGAGATCTCCAACCGCGCCTCCTGGAAGCAGGTGGTCAAGATGCAGAGCGAGCACCCTGGCGCGTTCGAGTGATATGCGCACGCGCAGCTCAAAAACTCTCTTGCATTCTGCGGCGAGCTCTGCTTTGTCTCGTCCACGGCTTTAATTCGTCGGGCTTCATGCAGTGATGTGGTTGTCGTCTACGTTAATTGTCGTTTCGGCTAAGAATAATATGAAGCCTTCTTGAGGTCTCCTCTCAGTGTATTCCTTTTGCAACGCCATGTCTTTCGATTCAATAAATATAAATGTGTCCCAGCCTTTTTTGCTCAAAAA] [+] EMBL AK059955 [CACACAGGTTAAGTCACTTTCACCTGCAAATCCACAAGCACATTGCTCGATCACCGAGGAAGAAAACTAGCTAGCTTAATCA CCGGGAAGAGTTGAGCAATGGCGGCAGGATTGCAGGTGTTCGGCCAGCCGGCGTCCACCGACGTCGCGAGGGTCCTGACCTGTCTCTTCGAGAAGAACCTCGAGTTCGAGCTCATCCGCATAGACACCTTCAAGAAGGAGCACAAGCTCCCCGAGTTCATCAAGCTACGGGATCCGACCGGGCAGGTGACTTTCAAGCATGGCGACAAGACTCTTGTTGATTCAAGAGCGATATGCCGATACCTGAGCACTCAGTTCCCAGACGACGGGAACAGGACGATCTACGGGACGGGGTCGCTGGAGCGGGCGTCGATCGAGCAGTGGCT GCAGGCGGAGGCGCAGAGCTTCGACGCGCCGAGC TCGGAGCTGGT GTTCCACCTGGCGTTCGCGCCGCAGC TCAACATACC GGCCGACGAGGCCCGCATCGCGGAGAACGAGC GGAAGCTGC AGC AG ATGCTGAACGTGTACGACGAGATCCTGGCGAAGAACAAGTACCTCGCCGGCGACGAGTTCACCCTGGCCGACCTGTCCCACCTCCCGAACTCCCACTACATCGTCAACGCGCGGTCGCCGAGGGGCAAGAAGCTCTTCACCTCCAAGAAGCACGTCGCGAGGTGGTACGAGGAGATCTCCAACCGCGCCTCCTGGAAGCAGGTGGTCAAGATGCAGAGCGAGCACCCTGGCGCGTTCGAGTGATATGCGCACGCGCAGCTCAAAAACTCTCTTGCATTCTGCGGCGAGCTCTGCTTTGTCTCGTCCACGGCTTTAATTCGTCGGGCTTCATGCAGTGATGTGGTTGTCGTCTACGTTAATTGTCGTTTCGGCTAAGAATAATATGAAGCCTTCTTGAG ] [+] EMBL CF308988 [ ACACAGGTTAAGTCACTTTCACCTGCAAATCCACAAGCACATTGCTCGATCACCGAGGAAGAAAACTAGCTAGCTTAATCA CCGGGAAGAGTTGAGCAATGGCGTCAGGATTGCAGGTGTTCGGCCAGCCGGCGTCCACCGACGTCGCGAGGGTCCTGACCTGTCTCTTCGAGAAGAACCTCGAGTTCGAGCTCATCCGCATAGACACCTTCAAGAAGGAGCACAAGCTCCCCGAGTTCATCAAGCTACGGGATCCGACCGGGCAGGTGACTTTCAAGCATGGCGACAAGACTCTTGTTGATTCAAGAGCGATATGCCGATACCTGAGCACTCAGTTCCCAGACGACGGGAACAGGACGATCTACGGGACGGGGTCGCTGGAGCGGGCGTCGATCGAGCAGTGGCT GCAGGCGGAGGCGCAGAGCTTCGACGCGCCGAGC TCGGAGCTGGT GTTCCACCTGGCGTTCGCGCCGCAGC TCAACATACC GGCCGACGAGGCCCGCATCGCGGAGAACGAGC GGAAGCTGC AGC AG ATGCTGAACGTGTACGACGAGATCCTGGCGAAGAACAAGTACCTCGCCGGCGACGAGTTCACCCTGGC ] [+] EMBL CF305371 [ CACAGGTTAAGTCACTTTCACCTGCAAATCCACAAGCACATTGCTCGATCACCGAGGAAGAAAACTAGCTAGCTTAATCA CCGGGAAGAGTTGAGCAATGGCGGCAGGATTGCAGGTGTTCGGCCAGCCGGCGTCCACCGACGTCGCGAGGGTCCTGACCTGTCTCTTCGAGAAGAACCTCGAGTTCGAGCTCATCCGCATAGACACCTTCAAGAAGGAGCACAAGCTCCCCGAGTTCATCAAGCTACGGGATCCGACCGGGCAGGTGACTTTCAAGCATGGCGACAAGACTCTTGTTGATTCAAGAGCGATATGCCGATACCTGAGCACTCAGTTCCCAGACGACGGGAACAGGACG ] [+] EMBL CA997962 [ TTTCACCTGCAAATCCACAAGCACATTGCTCGATCACCGAGGAAGAAAACTAGCTAGCTTAATCA CCGGGAAGAGTTGAGCAATGGCGGCAGGATTGCAGGTGTTCGGCCAGCCGGCGTCCACCGACGTCGCGAGGGTCCTGACCTGTCTCTTCGAGAAGAACCTCGAGTTCGAGCTCATCCGCATAGACACCTTCAAGAAGGAGCACAAGCTCCCCGAGTTCATCAAGCTACGGGATCCGACCGGGCAGGTGACTTTCAAGCATGGCGACAAGACTCTTGTTGATTCAAGAGCGATATGCCGATACCTGAGCACTCAGTTCCCAGACGACGGGAACAGGACGATCTACGGGACGGGGTCGCTGGAGCGGGCGTCGATCGAGCAGTGGCT GCAGGCGGAGGCGCAGAGCTTCGACGCGCCGAGC TCGGAGCTGGT GTTCCACCTGGCGTTCGCGCCGCAGC TCAACATACC GGCCGACGAGGCCCGCATCGCGGAGAACGAGC GGAAGCTGC AGC AG ATGCTGAACGTGTACGACGAGATCCTGGCGAAGAACAAGT CCTCGCCGGCGACGAGTTCACCCTGGCCGACCTGTCCCACCTTCCG ACTCCCACTACATCGTCAACGCGCGGTCGCCGAGGGGCAAGA ] [+] EMBL CA754600 [ TTCACCTGCAAATCCACAAGCACATTGCTCGATCACCGAGGAAGAAAACTAGCTAGCTTAATCACCCGGGAAGAGTTGAGCAATGGCGGCAGGATTGCAGGTGTTCGGCCAGCCGGCGTCCACCGACGTCGCGAGGGTCCTGACCTGTCTCTTCGAGAAGAACCTCGAGTTCGAGCTCATCCGCATAGACACCTTCAAGAAGGAGCACAAGCTCCCCGAGTTCATCAAGCTACGGGATCCGACCGGGCAGGTGACTTTCAAGCATGGCGACNAGACTCTTGTTGATTCAAGAGCGATATGCCGATACCTGAGCACTCAGTTCCCAGACGACGGGAACAGGACGATCTACGGGACGGGGTCGCTGGAGCGGGCGTCGATCGAACAGTGGCTGGCA GCGGAAGCGCAGAACTTCGACGCGCCCAGCTTCGGAGCTGGTGGTTCACCCGGGCGTTCGCGGCGCAAC TCCACATACCGGGCCGACGAGGCCCGCATCGCGGAGAACGAAC GGAAGCTGC AGC AG ATGCTGAACGTGTACCACAAGATCCTGGCGAA AACAAGTACCTCCCCGGCGA GAGTTCACCCTGGGCGACCGGT CCACCTCCGGAA ] [+] EMBL BM037785 [ cCCGCAGCTTCAACATACC GGCCGACGAGGCCCGCATCGCGGAGAACGAGCGGGAAGCTGCAAGCAAGAATGCTGAACGTGTACGACGAGATCCTGGCGAAGAACAAGTACCTCGCCGGCGACGAGTTCACCCTGGCCGACCTGTCCCACCTCCCGAACTCCCACTACATCGTCAACGCGCGGTCGCCGAGGGGCAAGAAGCTCTTCACCTCCAAGAAGCACGTCGCGAGGTGGTACGAGGAGATCTCCAACCGCGCCTCCTGGAAGCAGGTGGTCAAGATGCAGAGCGAGCACCCTGGCGCGTTCGAGTGATATGCGCACGCGCAGCTCAAAAACTCTCTTGCATTCTGCGGCGAGCTCTGCTTTGTCTCGTCCACGGCTTTAATTCGTCGGGCTTCATGCAGTGATGTGGTTGTCGTCTACGTTAATTGTCGTTTCGGCTAAGAATAATATGAAGCCTTCTTGAGGTCTCCTCTCAGTGTATTCCTTTTGCAACGCCATGTCTTTCGATTCAATAAATATAAATGTGTCCCAGCCTTTTTTGCTCAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||