These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8931#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 805 fasta sequence [GGGCGCGGCCGTGCCAGCCAACCGCTGCGGCTGTGCAAAAGTCCTCTTGCTCGT-GTTGTAGTTGTGTTGCGTTCGCGTAGAAGTGGGTCGATCTCTTGAACATCAGCAAAGATGGCCGCCACCACGCCGGCAGCGGCAGCGGCCGCGGCGCACGTCGTCCACATCGAGGCCGTGCAGACGGCGGTGCCGACGCGCGTCGTGGAGCCCGGGAGGACGCGCCTCGTCGCCGTGGCGGCGCCGCCGCTCCCGGCGCCCGCGCTGCAGCGCCGCGTCCGCGCGGTGCTCTACTACCGCGGCGCCGGCGGGGCGGCGCCGGGCGCGTGGGAGGACGGGGTGTGGGTGAAGGAGTCGCTGAGCGAGGCGCTGGCCGACCACCCGGAGATGGCCGGCCGGCTCCGCCGCCGCGCCGACGGGTCGTGGGAGGTGAAGCTGAACGACACCGGCGTGCGCCTCCTCCAGGCGACGGTGGACGCGACCCTCGACGAGTTCCTCGCCGGCAAGGGCGCCCTGGCGCGCCGGGAGGCCGCGCTGGCGCCGTGGACCGACGTGAACGCCGACGACCCCGACATGTGCCCCCCGTTCTTCATGCAGCTGACACGGTTCCAGGGAGACGGCGGGTACGCCGTCGGCGTGAGCTGCGCGCTGGTGCTGGCCGACCCGCTGACGCTGGCGAGGTTCCTCCTGTCGTGGGCGCGCACGCACGCCCGCATCAGGGCGCAGGGCAAGGCCACCCCGCTCCCGATGGCGCAGTACCTCGCCTACTTCCAGCGCCCGGAGACCACCCGCAAGCGCGTCAGGTCCGTCC] [+] EMBL CB645128 [GGGCGCGGCCGTGCCAGCCAACCGCTGCGGCTGTGCAAAAGTCCTCTTGCTCGT GTTGTAGTTGTGTTGCGTTCGCGTAGAAGTGGGTCGATCTCTTGAACATCAGCAAAGATGGCCGCCACCACGCCGGCAGCGGCAGCGGCCGCGGCGCACGTCGTCCACATCGAGGCCGTGCAGACGGCGGTGCCGACGCGCGTCGTGGAGCCCGGGAGGACGCGCCTCGTCGCCGTGGCGGCGCCGCCGCTCCCGGCGCCCGCGCTGCAGCGCCGCGTCCGCGCGGTGCTCTACTACCGCGGCGCCGGCGGGGCGGCGCCGGGCGCGTGGGAGGACGGGGTGTGGGTGAAGGAGTCCCTGAACGAGGC ] [+] EMBL CB655213 [ TCTTGCTCTTAGAAG AGTTGTGTTGCGTTCGCGTAGAAGTGGGTCGATCTCTTGAACATCAGCAAAGATGGCCGCCACCCCGCCGGCAGCGGCAGCGGCCGCGGCGCACGTCGTCCACATCGAGGCCGTGCAGACGGCGGTGCCGACGCGCGTCGTGGAGCCCGGGAGGACGCGCCTCGTCGCCGTGGCGGCGCCGCCGCTCCCGGCGCCCGCGCTGCAGCGCCGCGTCCGCGCGGTGCTCTACTACCGCGGCGCCGGCGGGGCGGCGCCGGGCGCGTGGGAGGACGGGGTGTGGGTTTTTGAGTCGCTGAGCGAGGCGCTGGCCGACCACCCGGAGATGGCCGGCCGGCTCCGCCGCCGCGCCGACGGGTCGTGGGAGGTGAAGCTGAACGACACCGGCGTGCGCCTCCTCCAGGCGACGGTGGACGCGACCCTCGACGAGTTCCTCGCCGGCAAGGGCGCCCTGGCGCGCCGGGAGGCCGCGCTGGCGCCGTGGACCGACGTGAACGCCGACGACCCCGACATGTGCCCCCCGTTCTTCATGCAGCTGACACGGTTCCAGGGAGACGGCGGGTACGCCGTCGGCGTGAGCTGCGCGCTGGTGCTGGCCGACCCGCTGACGCTGGCGAGGTTCCTCCTGTCGTGGGCGCGCACGCACGCCCCCATCAGGGCGCAGGGCAAGGCCACCCCGCTCCCGATGGCGCAGTACCTCGCCTACTTCCAGCGCCCGGAGACCACCCG ] [+] EMBL CB682244 [ CTTGCTCGT GTTGTAGTTGTGTTGCGTTCGCGTAGAAGTGGGTCGATCTCTTGAACATCAGCAAAGATGGCCGCCACCACGCCGGCAGCGGCAGCGGCCGCGGCGCACGTCGTCCACATCGAGGCCGTGCAGACGGCGGTGCCGACGCGCGTCGTGGAGCCCGGGAGGACGCGCCTCGTCGCCGTGGCGGCGCCGCCGCTCCCGGCGCCCGCGCTGCAGCGCCGCGTCCGCGCGGTGCTCTACTACCGCGGCGCCGGCGGGGCGGCGCCGGGCGCGTGGGAGGACGGGGTGTGGGTGAAGGAGTCGCTGAGCGAGGCGCTGGCCGACCACCCGGAGATGGCCGGCCGGCTCCGCCGCCGCGCCGACGGGTCGTGGGAGGTGAAGCTGAACGACACCGGCGTGCGCCTCCTCCAGGCGACGGTGGACGCGACCCTCGACGAGTTCCTCGCCGGCAAGGGCGCCCTGGCGCGCCGGGAGGCCGCGCTGGCGCCGTGGACCGACGTGAACGCCGACGACCCCGACATGTGCCCCCCGTTCTTCATGCAGCTGACACGGATCCAGGGAGACGGCGGGTACGCCGTCTGCGTGAGCTGCGCGCTGGTGCTGGCCGACCCGCTGACACTGGCGAGGTTCCTCCTGTCG ] [+] EMBL CB641500 [ GT GTTGTAGTTGTGTTGCGTTCGCGTAGAAGTGGGTCGATCTCTTGAACATCAGCAAAGATGGCCGCCACCACGCCGGCAGCGGCAGCGGCCGCGGCGCACGTCGTCCACATCGAGGCCGTGCAGACGGCGGTGCCGACGCGCGTCGTGGAGCCCGGGAGGACGCGCCTCGTCGCCGTGGCGGCGCCGCCGCTCCCGGCGCCCGCGCTGCAGCGCCGCGTCCGCGCGGTGCTCTACTACCGCGGCGCCGGCGGGGCGGCGCCGGGCGCGTGGGAGGACGGGGTGTGGGTGAAGGAGTCGCTGAGCGAGGCGCTGGCCGACCACCCGGAGATGGCCGGCCGGCTCCGCCGCCGCGCCGACGGGTCGTGGGAGGTGAAGCTGAACGACACCGGCGTGCGCCTCCTCCAGGCGACGGTGGACGCGACCCTCGACGAGTTCCTCGCCGGCAAGGGCGCCCTGGCGCGCCGGGAGGCCGCGCTGGCGCCGTGGACCGACGTGAACGCCGACGACCCCGACATGTGCCCCCCGTTCTTCATGCAGCTGACACGGTTCCAGGGAGACGGCGGGTACGCCGTCGGCGTGAGCTGCGCGCTGGTGCTGGCCGACCCGCTGACGCTGGCGAGGTTCCTCCTGTCGTGGGCGCGCACGCACGCCCGC ] [+] EMBL CB651332 [ GTTGTACTTGTGTTGCGTTCGCGTAGAAGTGGGTCGATCTCTTGAACATCAGCAAAGATGGCCGCCACCACGCCGGCAGCGGCAGCGGCCGCGGCGCACGTCGTCCACATCGAGGCCGTGCAGACGGCGGTGCCGACGCGCGTCGTGGAGCCCGGGAGGACGCGCCTCGTCGCCGTGGCGGCGCCGCCGCTCCCGGCGCCCGCGCTGCAGCGCCGCGTCCGCGCGGTGCTCTACTACCGCGGCGCCGGCGGGGCGGCGCCGGGCGCGTGGGAGGACGGGGTGTGGGTGAAGGAGTCGCTGAGCGAGGCGCTGGCCGACCACCCGGAGATGGCCGGCCGGCTCCGCCGCCGCGCCGACGGGTCGTGGGAGGTGAAGCTGAACGACACCGGCGTGCGCCTCCTCCAGGCGACGGTGGACGCGACCCTCGACGAGTTCCTCGCCGGCAAGGGCGCCCTGGCGCGCCGGGAGGCCGCGCTGGCGCCGTGGACCGACGTGAACGCCGACGACCCCGACATGTGCCCCCCGTTCTTCATGCAGCTGACACGGTTCCAGGGAGACGGCGGGTACGCCGTCGGCGTGAGCTGCGCGCTGGTGCTGGCCGACCCGCTGACGCTGGCGAGGTTCCTCCTGTCGTGGGCGCGCACGCACGCCCGCATCAGGGCGCAGGGCAAGGCCACCCCGCTCCCGATGGCGCAGTACCTCGCCTACTTCCAGCGCCCGGAGACCACCCGCAAGCGCGTCAGGTCCGTCC] [+] EMBL CB678657 [ CGTAGAAGTGGGTCGATCTCTTGAACATCAGCAAAGATGGCCGCCACCACGCCGGCAGCGGCAGCGGCCGCGGCGCACGTCGTCCACATCGAGGCCGTGCAGACGGCGGTGCCGACGCGCGTCGTGGAGCCCGGGAGGACGCGCCTCGTCGCCGTGGCGGCGCCGCCGCTCCCGGCGCCCGCGCTGCAGCGCCGCGTCCGCGCGGTGCTCTACTACCGCGGCGCCGGCGGGGCGGCGCCGGGCGCGTGGGAGGACGGGGTGTGGGTGAAGGAGTCGCTGAGCGAGGCGCTGGCCGACCACCCGGAGATGGCCGGCCGGCTCCGCCGCCGCGCCGACGGGTCGTGGGAGGTGAAGCTGAACGACACCGGCGTGCGCCTCCTCCAGGCGACGGTGGACGCGACCCTCGACGAGTTCCTCGCCGGCAAGGGCGCCCTGGCGCGCCGGGAGGCCGCGCTGGCGCCGTGGACCGACGTGAACGCCGACGACCCCGACATGTGCCCCCCGTTCTTCATGCAGCTGACACGGTTCCAGGGAGACGGCGGGTACGCCGTCGGCGTGAGCTGCGCGCTGGTGCTGGCCGACCCGCTGACGCTGGCGAGGTTCCTCCTGTCGTGGGCGCGCACGCACGCCCGCATCAGGGCGCAGGGCAAGGCCACCCCGCTCCCGATGGCGCAGTACCTCGCCTACTTGCAGCGCC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||