cluster # 8948

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Oryza sativa
cluster # 8948 cluster # 8948 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8948#0 length = 1636 sequences # 6
consensusID : consensus_8948#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1636
fasta sequence
                              [CACACCTCCAACTCCAACGAACACACAGAGGGAGGAATCGGATCGGATTGGATCCCAACCCACCCCGCGCCGCCGCTGCCGCGTCCCGTCCCGAATCCTCCGGCGAGCCTGACGTCGGCCGATGGGCGCATCAGTGACTACTGGCTTGCAGATGGCGGCGGCACGCCCTTGTATCCCAGCTTGCCAACGCCTGCTAGGGTCAAGAGCAGCACTTCCTTCATTTGGAAGGGCGCTTAGTACCCAAACTGGCTTCGCGAGCTGCAGAAAAACAGCATCAGCAGGGCCGTTTGTTTCTCTGAACCACAAGAGGTTTGCCGTGAGGGCGATGTCTGCCCAGGGACTCCCCATTGATCTCAGAGGTAAAAGAGCATTTATTGCTGGAGTTGCTGATGATAATGGCTATGGCTGGGCAATAGCAAAAGCTCTTGCTGCAGCTGGTGCCGAGATTCTTGTTGGTACATGGGTACCTGCACTGAACATATTTGAGACAAGCTTGAGGCGTGGGAAGTTTGACGAATCACGAAAGCTTCCTGATGGATCTCTTATGGAGATTACAAAAGTCTACCCATTGGATGCAGTTTTTGACTCTCCTGAGGATGTTCCTGATGATGTTAAAGCAAACAAAAGGTATGCTGGATCTTCAAACTGGACTGTTAAGGAAGTTGCTGAAACTGTGAAGAATGACTTTGGTACCATTGACATCCTCGTACACTCTCTTGCAAATGGTCCTGAGGTAAAAAACTCTTTGCTGGAGACATCAAGAAAAGGGTATCTTGCTGCAGTTTCAGCATCTAGTTACTCTTTCATCTCTTTACTCCAACACTTCCTTCCTATAATGAATCCAGGGGGTGCTACTATATCCTTGACCTACATAGCTTCCGAAAGGACAATTCCTGGATACGGTGGCGGCATGAGCTCAGCAAAAGCAGCACTTGAGAGTGATACAAGAGTTCTAGCTTACGAAGCAGGTCGAAAAGGCAAGATCAGAGTGAATACCATATCAGCAGGTCCATTGGGAAGTCGAGCAGCCAAAGCTATTGGTTTCATCGAGAAGATGATAGAGTATTCGTACGTGAACGCACCACTGCAGAAGGAGCTCTTGGCAGATGAAGTGGGGAACACAGCAGCATTCTTAGCATCGCCGTTGGCATCTGCAATCACTGGATCAACTATCTATGTTGACAATGGGCTCAATACAATGGGACTTGCACTTGACAGCCCTACACTATCCACATAGACGTGTAAACTATTCTCCTGGATGGTTCCGTTTGGTAGCAGATGGTCATTAGGCCCCAACTGAAGCTCAAAACCAGATGCTGATATGAAAATGAGGAAAGATGGTAGTTTGAAGATGCAGACTTTCTAGAAAGTTGAGTTACTGGGTTTTCTTCATTTTGGTCTATGCTAGCAATGAGAATTAGCATTGTAGGAGTACAGTTTGTTGATTGTTCTTATGTTAGTCCTAGCCTCCTAGGATCTGATCTGAAGAAAGAGAATAATGGA-AGTTAAAAAGAACAGGAAATCGAAGTTCTGCCCATTGCGTTGTTTGTTTTTCGTGTAGTGTTATCTCTCACTCGGGTTTTATAAAAGTTGTAAAAATCTATAGGTATTATAACGTGTGGTACATGATCACACA]

[+] EMBL CB645110             [CACACCTCCAACTCCAACGAACACACAGAGGGAGGAATCGGATCGGATTGGATCCCAACCCACCCCGCGCCGCCGCTGCCGCGTCCCGTCCCGAATCCTCCGGCGAGCCTGACGTCGGCCGATGGGCGCATCAGTGACTACTGGCTTGCAGATGGCGGCGGCACGCCCTTGTATCCCAGCTTGCCAACGCCTGCTAGGGTCAAGAGCAGCACTTCCTTCATTTGGAAGGGCGCTTAGTACCCAAACTGGCTTCGCGAGCTGCAGAAAAACAGCATCAGCAGGGCCGTTTGTTTCTCTGAACCACAAGAGGTTTGCCGTGAGGGCGATGTCTGCCCAGGGACTCCCCATTGATCTCAGAGGTAAAAGAGCATTTATTGCTGGAGTTGCTGATGATAATGGCTATGGCTGGGCAATAGCAAAAGCTCTTGCTGCAGCTGGTGCCGAGATTCTTGTTGGTACATGGGTACCTGCACTGAACATATTTGAGACAAGCTTGAGGCGTGGGAAGTTTGACGAATCACGAAAGCTTCCTGATGGATCTCTTATGGAGATTACAAAAGTCTACCCATTGGATGCAGTTTTTGACTCTCCTGAGGATGTTCCTGATGATGTTAAAGCAAACAAAAGGTATGCTGGATCTTCAAACTGGACTGTTAAGGAAGTTGCTGAAACTGTGAAGAATGACTTTGGTACCATTGACATCCTCGTACACTCTCTTGCAAATGGTCCTGAGGTAAAAAACTCTTTGCTGGAGACATCAAGAAAAAGGTATCTTGCTGCAGTTTCAGCATCTAGTTACTCTTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK103141             [   atCTCCAACTCCAACGAACACACAGAGGGAGGAATCGGATCGGATTGGATCCCAACCCACCCCGCGCCGCCGCTGCCGCGTCCCGTCCCGAATCCTCCGGCGAGCCTGACGTCGGCCGATGGGCGCATCAGTGACTACTGGCTTGCAGATGGCGGCGGCACGCCCTTGTATCCCAGCTTGCCAACGCCTGCTAGGGTCAAGAGCAGCACTTCCTTCATTTGGAAGGGCGCTTAGTACCCAAACTGGCTTCGCGAGCTGCAGAAAAACAGCATCAGCAGGGCCGTTTGTTTCTCTGAACCACAAGAGGTTTGCCGTGAGGGCGATGTCTGCCCAGGGACTCCCCATTGATCTCAGAGGTAAAAGAGCATTTATTGCTGGAGTTGCTGATGATAATGGCTATGGCTGGGCAATAGCAAAAGCTCTTGCTGCAGCTGGTGCCGAGATTCTTGTTGGTACATGGGTACCTGCACTGAACATATTTGAGACAAGCTTGAGGCGTGGGAAGTTTGACGAATCACGAAAGCTTCCTGATGGATCTCTTATGGAGATTACAAAAGTCTACCCATTGGATGCAGTTTTTGACTCTCCTGAGGATGTTCCTGATGATGTTAAAGCAAACAAAAGGTATGCTGGATCTTCAAACTGGACTGTTAAGGAAGTTGCTGAAACTGTGAAGAATGACTTTGGTACCATTGACATCCTCGTACACTCTCTTGCAAATGGTCCTGAGGTAAAAAACTCTTTGCTGGAGACATCAAGAAAAGGGTATCTTGCTGCAGTTTCAGCATCTAGTTACTCTTTCATCTCTTTACTCCAACACTTCCTTCCTATAATGAATCCAGGGGGTGCTACTATATCCTTGACCTACATAGCTTCCGAAAGGACAATTCCTGGATACGGTGGCGGCATGAGCTCAGCAAAAGCAGCACTTGAGAGTGATACAAGAGTTCTAGCTTACGAAGCAGGTCGAAAAGGCAAGATCAGAGTGAATACCATATCAGCAGGTCCATTGGGAAGTCGAGCAGCCAAAGCTATTGGTTTCATCGAGAAGATGATAGAGTATTCGTACGTGAACGCACCACTGCAGAAGGAGCTCTTGGCAGATGAAGTGGGGAACACAGCAGCATTCTTAGCATCGCCGTTGGCATCTGCAATCACTGGATCAACTATCTATGTTGACAATGGGCTCAATACAATGGGACTTGCACTTGACAGCCCTACACTATCCACATAGACGTGTAAACTATTCTCCTGGATGGTTCCGTTTGGTAGCAGATGGTCATTAGGCCCCAACTGAAGCTCAAAACCAGATGCTGATATGAAAATGAGGAAAGATGGTAGTTTGAAGATGCAGACTTTCTAGAAAGTTGAGTTACTGGGTTTTCTTCATTTTGGTCTATGCTAGCAATGAGAATTAGCATTGTAGGAGTACAGTTTGTTGATTGTTCTTATGTTAGTCCTAGCCTCCTAGGATCTGATCTGAAGAAAGAGAATAATGGA AGTTAAAAAGAACAGGAAATCGAAGTTCTGCCCATTGCGTTGTTTGTTTTTCGTGTAGTGTTATCTCTCACTCGGGTTTTATAAAAGTTGTAAAAATCTATAGGTATTATAACGTGTGGTACATGATCACACA]
[+] EMBL CB666741             [                           GAGGGAGGAATCGGATCGGATTGGATCCCAACCCACCCCGCGCCGCCGCTGCCGCGTCCCGTCCCGAATCCTCCGGCGAGCCTGACGTCGGCCGATGGGCGCATCAGTGACTACTGGCTTGCAGATGGCGGCGGCACGCCCTTGTATCCCAGCTTGCCAACGCCTGCTAGGGTCAAGAGCAGCACTTCCTTCATTTGGAAGGGCGCTTAGTACCCAAACTGGCTTCGCGAGCTGCAGAAAAACAGCATCAGCAGGGCCGTTTGTTTCTCTGAACCACAAGAGGTTTGCCGTGAGGGCGATGTCTGCCCAGGGACTCCCCATTGATCTCAGAGGTAAAAGAGCATTTATTGCTGGAGTTGCTGATGATAATGGCTATGGCTGGGCAATAGCAAAAGCTCTTGCTGCAGCTGGTGCCGAGATTCTTGTTGGTACATGGGTACCTGCACTGAACATATTTGAGACAAGCTTGAGGCGTGGGAAGTTTGACGAATCACGAAAGCTTCCTGATGGATCTCTTATGGAGATTACAAAAGTCTACCCATTGGATGCAGTTTTTGACTCTCCTGAGGATGTTCCTGATGATGTTAAAGCAAACAAAAGGTATGCTGGATCTTCAAACTGGACTGTTAAGGAAGTTGCTGAAACTGTGAAGAATGACTTTGGTACCATTGACATCCTCGTACACTCTCTTGCAAATGGTCCTGAGGTAAAAAACTCTTTGCTGGAGACATCAAGAANAGGGTATCTTGCTGCAGTTTCAGCATCTAGTTACTCTTTCATCTCTTTACTCCAACACTTCCTTCCTATAATGAATCCAGGGGGTGCTACTATATCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB645111             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GTATCTTGCTGCAGTTTCAGCATCTAGTTACTCTTTCATCTCTTTACTCCAACACTTCCTTCCTATAATGAATCCAGGGGGTGCTACTATATCCTTGACCTACATAGCTTCCGAAAGGACAATTCCTGGATACGGTGGCGGCATGAGCTCAGCAAAAGCAGCACTTGAGAGTGATACAAGAGTTCTAGCTTACGAAGCAGGTCGAAAAGGCAAGATCAGAGTGAATACCATATCAGCAGGTCCATTGGGAAGTCGAGCAGCCAAAGCTATTGGTTTCATCGAGAAGATGATAGAGTATTCGTACGTGAACGCACCACTGCAGAAGGAGCTCTTGGCAGATGAAGTGGGGAACACAGCAGCATTCTTAGCATCGCCGTTGGCATCTGCAATCACTGGATCAACTATCTATGTTGACAATGGGCTCAATACAATGGGACTTGCACTTGACAGCCCTACACTATCCACATAGACGTGTAAACTATTCTCCTGGATGGTTCCGTTTGGTAGCAGATGGTCATTAGGCCCCAACTGAAGCTCAAAACCAGATGCTGATATGAAAATGAGGAAAGATGGTAGTTTGAAGATGCAGACTTTCTAGAAAGTTGAGTTACTGGGTTTTCTTCATTTTGGTCTATGCTAGCAATGAGAATTAGCATTGTAGGAGTACAGTTTGTTGATTGTTCTTATGTTAGTCCTAGCCTCCTAGGATCTGATCTGAAGAAAGAGAATAATGGAGGGTTAAAAAGACCAGGAAATCGAAGTTCTGCCCAaaaaaaagg                                                                                          ]
[-] EMBL CB666742             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GTATCTTGCTGCAGTTTCAGCATCTAGTTACTCTTTCATCTCTTTACTCCAACACTTCCTTCCTATAATGAATCCAGGGGGTGCTACTATATCCTTGACCTACATAGCTTCCGAAAGGACAATTCCTGGATACGGTGGCGGCATGAGCTCAGCAAAAGCAGCACTTGAGAGTGATACAAGAGTTCTAGCTTACGAAGCAGGTCGAAAAGGCAAGATCAGAGTGAATACCATATCAGCAGGTCCATTGGGAAGTCGAGCAGCCAAAGCTATTGGTTTCATCGAGAAGATGATAGAGTATTCGTACGTGAACGCACCACTGCAGAAGGAGCTCTTGGCAGATGAAGTGGGGAACACAGCAGCATTCTTAGCATCGCCGTTGGCATCTGCAATCACTGGATCAACTATCTATGTTGACAATGGGCTCAATACAATGGGACTTGCACTTGACAGCCCTACACTATCCACATAGACGTGTAAACTATTCTCCTGGATGGTTCCGTTTGGTAGCAGATGGTCATTAGGCCCCAACTGAAGCTCAAAACCAGATGCTGATATGAAAATGAGGAAAGATGGTAGTTTGAAGATGCAGACTTTCTAGAAAGTTGAGTTACTGGGTTTTCTTCATTTTGGTCTATGCTAGCAATGAGAATTAGCATTGTAGGAGTACAGTTTGTTGATTGTTCTTATGTTAGTCCTAGCCTCCTAGGATCTGATCTGAAGAAAGAGAATAATGGA AGTTAAAAAGAACAGGAAATCGAAGTTCTG                                                                                                       ]
[-] EMBL CF322111             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CAGGTCGAAAAGGCAAGATCAGAGTGAATACCATATCAGCAGGTCCATTGGGAAGTCGAGCAGCCAAAGCTATTGGTTTCATCGAGAAGATGATAGAGTATTCGTACGTGAACGCACCACTGCAGAAGGAGCTCTTGGCAGATGAAGTGGGGAACACAGCAGCATTCTTAGCATCGCCGTTGGCATCTGCAATCACTGGATCAACTATCTATGTTGACAATGGGCTCAATACAATGGGACTTGCACTTGACAGCCCTACACTATCCACATAGACGTGTAAACTATTCTCCTGGATGGTTCCGTTTGGTAGCAGATGGTCATTAGGCCCCAACTGAAGCTCAAAACCAGATGCTGATATGAAAATGAGGAAAGATGGTAGTTTGAAGATGCAGACTTTCTAGAAAGTTGAGTTACTGGGTTTTATTCATTTTGGTCTATGCTAGCAATGAGAATTAGCATTGTAGGAGTACAGTTTGTTGATTGTTCTTATGTTAGTCCTAGCCTCCTAGGATCTGATCTGAAGAAAGAGAATAATGGA AGTTAAAAAGAACAGGAAAaaa                                                                                                               ]




>consensus_8948#0
CACACCTCCAACTCCAACGAACACACAGAGGGAGGAATCGGATCGGATTGGATCCCAACC
CACCCCGCGCCGCCGCTGCCGCGTCCCGTCCCGAATCCTCCGGCGAGCCTGACGTCGGCC
GATGGGCGCATCAGTGACTACTGGCTTGCAGATGGCGGCGGCACGCCCTTGTATCCCAGC
TTGCCAACGCCTGCTAGGGTCAAGAGCAGCACTTCCTTCATTTGGAAGGGCGCTTAGTAC
CCAAACTGGCTTCGCGAGCTGCAGAAAAACAGCATCAGCAGGGCCGTTTGTTTCTCTGAA
CCACAAGAGGTTTGCCGTGAGGGCGATGTCTGCCCAGGGACTCCCCATTGATCTCAGAGG
TAAAAGAGCATTTATTGCTGGAGTTGCTGATGATAATGGCTATGGCTGGGCAATAGCAAA
AGCTCTTGCTGCAGCTGGTGCCGAGATTCTTGTTGGTACATGGGTACCTGCACTGAACAT
ATTTGAGACAAGCTTGAGGCGTGGGAAGTTTGACGAATCACGAAAGCTTCCTGATGGATC
TCTTATGGAGATTACAAAAGTCTACCCATTGGATGCAGTTTTTGACTCTCCTGAGGATGT
TCCTGATGATGTTAAAGCAAACAAAAGGTATGCTGGATCTTCAAACTGGACTGTTAAGGA
AGTTGCTGAAACTGTGAAGAATGACTTTGGTACCATTGACATCCTCGTACACTCTCTTGC
AAATGGTCCTGAGGTAAAAAACTCTTTGCTGGAGACATCAAGAAAAGGGTATCTTGCTGC
AGTTTCAGCATCTAGTTACTCTTTCATCTCTTTACTCCAACACTTCCTTCCTATAATGAA
TCCAGGGGGTGCTACTATATCCTTGACCTACATAGCTTCCGAAAGGACAATTCCTGGATA
CGGTGGCGGCATGAGCTCAGCAAAAGCAGCACTTGAGAGTGATACAAGAGTTCTAGCTTA
CGAAGCAGGTCGAAAAGGCAAGATCAGAGTGAATACCATATCAGCAGGTCCATTGGGAAG
TCGAGCAGCCAAAGCTATTGGTTTCATCGAGAAGATGATAGAGTATTCGTACGTGAACGC
ACCACTGCAGAAGGAGCTCTTGGCAGATGAAGTGGGGAACACAGCAGCATTCTTAGCATC
GCCGTTGGCATCTGCAATCACTGGATCAACTATCTATGTTGACAATGGGCTCAATACAAT
GGGACTTGCACTTGACAGCCCTACACTATCCACATAGACGTGTAAACTATTCTCCTGGAT
GGTTCCGTTTGGTAGCAGATGGTCATTAGGCCCCAACTGAAGCTCAAAACCAGATGCTGA
TATGAAAATGAGGAAAGATGGTAGTTTGAAGATGCAGACTTTCTAGAAAGTTGAGTTACT
GGGTTTTCTTCATTTTGGTCTATGCTAGCAATGAGAATTAGCATTGTAGGAGTACAGTTT
GTTGATTGTTCTTATGTTAGTCCTAGCCTCCTAGGATCTGATCTGAAGAAAGAGAATAAT
GGAAGTTAAAAAGAACAGGAAATCGAAGTTCTGCCCATTGCGTTGTTTGTTTTTCGTGTA
GTGTTATCTCTCACTCGGGTTTTATAAAAGTTGTAAAAATCTATAGGTATTATAACGTGT
GGTACATGATCACACA
clustalw multiple alignements is not computed in this case