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Oryza sativa
cluster # 8950 cluster # 8950       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8950#0 length = 1732 sequences # 4  
consensus_8950#1 length = 599 sequences # 1  
consensus_8950#2 length = 427 sequences # 1  

consensusID : consensus_8950#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1732
fasta sequence
                              [GGCCATGGTGCAATACGTCACCGGCTACCTGTGCCTCTCCTTGGCTCTCCTCTTGCTCACTCTCGTCCTCCACAAGGTGGCGAGGAAGGCGACCGGTAATGGCGCCGGCAAGCCGAGGCTTCCGCCGGGGCCGTGGCGGCTGCCGGTCATCGGCAACCTCCACCAGGTCGCGATGGGCGGCCCGCTCGTCCACCGCACCATGGCCGACCTGGCGCGCCGGCTGGACGCGCCGCTCATGTCGCTCAGGCTCGGCGAGCTCCGCGTCGTCGTCGCCTCATCCGCCAACGCCGCCAGGGAGATCACCAAGACGCACGACGTCGCGTTCGCGACGCGGCCGTGGACCTCCACCATCCGCGTCCTGATGAGCGACGGCGTTGGGCTGGTGTTCGCGCCCTACGGCGCGCTGTGGCGGCAGCTCCGCAAGATCGCCGTGGTGGAGCTCCTCAGCGCGCGCCGCGTCCAGTCGTTCCGCCGCATCCGGGAGGACGAGGTCGGCCGCCTCGTCGCCGCCGTCGCCGCCGCCCCG-GCGGCGCAGCCCGTGAACGTCAGCGAGCGGATCGCGGCGCTCATCTCCGACTCGGCGGTGCGCACCATCATGGGCGACAGGTTCGAGAAGCGGGACGAATTCCTGGGAGGGTCTCGCCGAGGGGGACAGGATAGCCTCCGGGTTCAGCCTCGGCGACCTGTTCCCGTCGTCGAGGCTGGCCAGCTTCGTCGGCGGCACGACGCGGCGGGCGGAGGCGAACCACCGCAAGAACTTCGGGCTGATAGAGTGCGCTCTCAGGCAGCACGAGGAGCGGAGGGCCGCCGGCGCCGTGGACGACGACGAGGACCTCGTCGATGTGCTTCTCAGGGTTCAGAAGGAAGGGAGCCTCCAAGTGCCCCTCACCATGGGCAATATCAAAGCCGTTATCCTTGAACTTTTTGGTGCTGGGAGCGAGACATCAGCAAGTACACTTCATTGGGCGATGACTGAGCTCATAATGAATCCAAAAGTGATGCTGAAGGCACAAGATGAGTTAAGTAACGTCATCAAAGGAAAGCAAACAATATCTGAAGATGACTTAGTTGAACTGAGGTACTTAAAACTTGTTATCAAAGAGACCTTAAGGTTACATCCTGTGGTGCCACTACTTCTCCCTAGGGAATGTCGGGAGACATGTGAGGTCATGGGGTACGATATCCCCATAGGTACTACTATGCTTGTTAACGTGTGGGCAATCGGTAGAGACCCTAAGTATTGGGAGGACGCTGAGACATTTAGACCCGAGCGATTTGAGGATGGACATATAGACTTCAAAGGAACAGATTTTGAATTTATACCGTTTGGAGCTGGGCGAAGGATGTGCCCTGGTATGGCATTTGCAGAAGCAATCATGGAGCTCGTTCTAGCCTCGCTTCTCTATCACTTTGATTGGGAGCTTCCTGATGGGATCTCGCCGACCAAGGTGGACATGATGGAGGAGTTGGGTGCAACTATTCGAAAAAAGAATGATCTTTATCTCGTTCCAACTGTTCGTGTGCCTATGTCGACTGCCCTATAGCTGTTTACACTTAAGAAATAGTATGTTTGTCTCGTATGTACGTGTCTAAATGATAAGCTATGTAACTTTTGAT-GA-TG-TGTACTCCTACTTCCTATCCTACCTATTATAAATTATTATTTAAGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK100832             [GGCCATGGTGCAATACGTCACCGGCTACCTGTGCCTCTCCTTGGCTCTCCTCTTGCTCACTCTCGTCCTCCACAAGGTGGCGAGGAAGGCGACCGGTAATGGCGCCGGCAAGCCGAGGCTTCCGCCGGGGCCGTGGCGGCTGCCGGTCATCGGCAACCTCCACCAGGTCGCGATGGGCGGCCCGCTCGTCCACCGCACCATGGCCGACCTGGCGCGCCGGCACGACGCGCCGCTCATGTCGCTCAGGCTCGGCGAGCTTCGCGTCGTCGTCGCCTCGTCCGCCGACGCTGCCAGGGAGATCACCAAGACGCACGACGTCGCGTTCGCGACGCGGCCGTGGAGCTCCACCATCCGCGTCATGATGAGCGACGGCGTCGGGCTGGTGTTCGCGCCCTACGGCGCGCTGTGGCGGCAGCTCCGCAAGATCGCCGTGGTGGAGCTCCTCAGCGCGCGCCGCGTCCAGTCGTTCCGCCGCATCCGGGAGGACGAGGTCTGCCGCCTCGTCGCCGCCGTCGCCGCGGCGCAGCCCGGCG AGGCCGTGAACGTCAGCGAGCGGATCACGGCGCTCATCTCCGACTCGGCGGTGCGCACCATCATGGGCGACAGGTTCGAGAAGCGGGACGAATTCCTGGGAGGGTCTCGCCGAGGGGGACAGGATAGCCTCCGGGTTCAGCCTCGGCGACCTGTTCCCGTCGTCGAGGCTGGCCAGCTTCGTCGGCGGCACGACGCGGCGGGCGGAGGCGAACCACCGCAAGAACTTCGGGCTGATAGAGTGCGCTCTCAGGCAGCACGAGGAGCGGAGGGCCGCCGGCGCCGTGGACGACGACGAGGACCTCGTCGATGTGCTTCTCAGGGTTCAGAAGGAAGGGAGCCTCCAAGTGCCCCTCACCATGGGCAATATCAAAGCCGTTATCCTTGAACTTTTTGGTGCTGGGAGCGAGACATCAGCAAGTACACTTCATTGGGCGATGACTGAGCTCATAATGAATCCAAAAGTGATGCTGAAGGCACAAGATGAGTTAAGTAACGTCATCAAAGGAAAGCAAACAATATCTGAAGATGACTTAGTTGAACTGAGGTACTTAAAACTTGTTATCAAAGAGACCTTAAGGTTACATCCTGTGGTGCCACTACTTCTCCCTAGGGAATGTCGGGAGACATGTGAGGTCATGGGGTACGATATCCCCATAGGTACTACTATGCTTGTTAACGTGTGGGCAATCGGTAGAGACCCTAAGTATTGGGAGGACGCTGAGACATTTAGACCCGAGCGATTTGAGGATGGACATATAGACTTCAAAGGAACAGATTTTGAATTTATACCGTTTGGAGCTGGGCGAAGGATGTGCCCTGGTATGGCATTTGCAGAAGCAATCATGGAGCTCGTTCTAGCCTCGCTTCTCTATCACTTTGATTGGGAGCTTCCTGATGGGATCTCGCCGACCAAGGTGGACATGATGGAGGAGTTGGGTGCAACTATTCGAAAAAAGAATGATCTTTATCTCGTTCCAACTGTTCGTGTGCCTATGTCGACTGCCCTATAGCTGTTTACACTTAAGAGACAAAATATTTGTCTCATCTGTACGCGCCTATATGATAAACTATATAACTTTTGATGGATTGATGTACTCCTAC                                                                                                    ]
[+] EMBL AK107034             [ GCCATGGTGCAAGACATCACCGGCTACCTGTGCCTCTCCTTGGCTCTCCTCTTGCTCACTCTCGTCCTCCACAAGGTGGCGAGGAAGGCGACCGGTAATGGCGCCGGCAAGCCGAGGCTTCCGCCGGGGCCGTGGCGGCTGCCGGTCATCGGCAACCTCCACCAGGTCGCGATGGGCGGCCCGCTCGTCCACCGCACCATGGCCGACCTGGCGCGCCGGCTGGACGCGCCGCTCATGTCGCTCAGGCTCGGCGAGCTCCGCGTCGTCGTCGCCTCATCCGCCAACGCCGCCAGGGAGATCACCAAGACGCACGACGTCGCGTTCGCGACGCGGCCGTGGACCTCCACCATCCGCGTCCTGATGAGCGACGGCGTTGGGCTGGTGTTCGCGCCCTACGGCGCGCTGTGGCGGCAGCTCCGCAAGATCGCCGTGGTGGAGCTCCTCAGCGCGCGCCGCGTCCAGTCGTTCCGCCGCATCCGGGAGGACGAGGTCGGCCGCCTCGTCGCCGCCGTCGCCGCCGCCCCG GCGGCGCAGCCCGTGAACGTCAGCGAGCGGATCGCGGCGCTCATCTCCGACTCGGCGGTGCGCACCATCATCGGCGGCCGGTTCGAGAGGCGGGACGAGTTCCT GGAGGGTCTCGCCGAGGCGATCAAGATCACCTCCGGGTTCAGCCTCGGCGACCTGTTCCCGTCGTCGAGGCTGGCCAGCTTCGTCGGCGGCACGACGCGGCGGGCGGAGGCGAACCACCGCAAGAACTTCGAGCTGATAGAGTGCGCTCTGAGGCAGCACGAGGAGCGGAGGGCCGCCGGCGCCGTGGACGACGACGAGGACCTCGTCGATGTGCTTCTCAGGGTTCAGAAGGATGGGAGCCTCCAGATGCCTCTCACCATGGGCAATATCAAAGCCGTCGTCCTGGAACTTTTTGGTGCTGGGAGCGAGACATCAGCTAATACACTTCAATGGGCGATGACTGAGCTCATAATGAATCCAAGAGTGATGCTGAAGGCACAAGCTGAGTTAAGTAACGTCATCAAAGGAAAGCAAACGATATCTGAAGATGACTTAGTTGAATTGAAGTACTTAAAACTTATTATCAAAGAGACCTTAAGGTTACATCCTGTAGTGCCACTACTTCTCCCTAGGGAATGTCGGGAGACATGTGAGGTCATGGGTTACGATATCCCCATAGGTACTACTGTGCTTGTTAACGTATGGGCAATAGGTAGAGATCCTAAGTATTGGGAGGATGCTGAGACATTCATACCTGAACGATTTGAGGATGGCCATATAGACTTCAAAGGAACAAACTTTGAATTTATACCGTTTGGAGCTGGACGAAGGATGTGCCCTGGCATGGCATTTGCAGAAGTAATCATGGAGCTCGCTCTAGCCTCATTGCTTTACCACTTTGATTGGGAGCTCCCTGATGGCATCTCGCCAACCAAGGTGGACATGATGGAGGAGTTGGGTGCTACAATTCGAAGAAAGAACGATCTTTACCTTATTCCTACTGTCCGTGTGCCTTTGTCAACTGTCTTATAGTTGTTTACACTT ATAAATAGTGTGTTTGTCTCGTATGTACGTGTCTAAATGATAAGCTATGTAACTTTTGAT GA TG TGTACTCCTACTTCCTATCCTACCTATTATAAATTAT                                                                          ]
[+] EMBL CB639707             [                     CGGCTACCTGTGCCTCTCCTTGGCTCTCCTCTTGCTCACTCTCGTCCTCCACAAGGTGGCGAGGAAGGCGACCGGTAATGGCGCCGGCAAGCCGAGGCTTCCGCCGGGGCCGTGGCGGCTGCCGGTCATCGGCAACCTCCACCAGGTCGCGATGGGCGGCCCGCTCGTCCACCGCACCATGGCCGACCTGGCGCGCCGGCTGGACGCGCCGCTCATGTCGCTCAGGCTCGGCGAGCTCCGCGTCGTCGTCGCCTCATCCGCCAACGCCGCCAGGGAGATCACCAAGACGCACGACGTCGCGTTCGCGACGCGGCCGTGGACCTCCACCATCCGCGTCCTGATGAGCGACGGCGTTGGGCTGGTGTTCGCGCCCTACAGCGCGCTGTGGCGGCAGCTCCGCAAGATCGCCGTGGTGGAGCTCCTCAGCGCGCGCCGCGTCCAGTCGTTCCGCCGCATCCGGGAGGACGAGGTCGGCCGCCTCGTCGCCGCCGTCGCCGCCGCCCCG GCGGCGCAGCCCGTGAACGTCAGCGAGCGGATCGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CF328752             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AAATAGTATGTTTGTCTCGTATGTACGTGTCTAAATGATAAGCTATGTAACTTTTGAT GA TG TGTACTCCTACTTCCTATCCTACCTATTATAAATTATTATTTAAGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_8950#0 GGCCATGGTGCAATACGTCACCGGCTACCTGTGCCTCTCCTTGGCTCTCCTCTTGCTCAC TCTCGTCCTCCACAAGGTGGCGAGGAAGGCGACCGGTAATGGCGCCGGCAAGCCGAGGCT TCCGCCGGGGCCGTGGCGGCTGCCGGTCATCGGCAACCTCCACCAGGTCGCGATGGGCGG CCCGCTCGTCCACCGCACCATGGCCGACCTGGCGCGCCGGCTGGACGCGCCGCTCATGTC GCTCAGGCTCGGCGAGCTCCGCGTCGTCGTCGCCTCATCCGCCAACGCCGCCAGGGAGAT CACCAAGACGCACGACGTCGCGTTCGCGACGCGGCCGTGGACCTCCACCATCCGCGTCCT GATGAGCGACGGCGTTGGGCTGGTGTTCGCGCCCTACGGCGCGCTGTGGCGGCAGCTCCG CAAGATCGCCGTGGTGGAGCTCCTCAGCGCGCGCCGCGTCCAGTCGTTCCGCCGCATCCG GGAGGACGAGGTCGGCCGCCTCGTCGCCGCCGTCGCCGCCGCCCCGGCGGCGCAGCCCGT GAACGTCAGCGAGCGGATCGCGGCGCTCATCTCCGACTCGGCGGTGCGCACCATCATGGG CGACAGGTTCGAGAAGCGGGACGAATTCCTGGGAGGGTCTCGCCGAGGGGGACAGGATAG CCTCCGGGTTCAGCCTCGGCGACCTGTTCCCGTCGTCGAGGCTGGCCAGCTTCGTCGGCG GCACGACGCGGCGGGCGGAGGCGAACCACCGCAAGAACTTCGGGCTGATAGAGTGCGCTC TCAGGCAGCACGAGGAGCGGAGGGCCGCCGGCGCCGTGGACGACGACGAGGACCTCGTCG ATGTGCTTCTCAGGGTTCAGAAGGAAGGGAGCCTCCAAGTGCCCCTCACCATGGGCAATA TCAAAGCCGTTATCCTTGAACTTTTTGGTGCTGGGAGCGAGACATCAGCAAGTACACTTC ATTGGGCGATGACTGAGCTCATAATGAATCCAAAAGTGATGCTGAAGGCACAAGATGAGT TAAGTAACGTCATCAAAGGAAAGCAAACAATATCTGAAGATGACTTAGTTGAACTGAGGT ACTTAAAACTTGTTATCAAAGAGACCTTAAGGTTACATCCTGTGGTGCCACTACTTCTCC CTAGGGAATGTCGGGAGACATGTGAGGTCATGGGGTACGATATCCCCATAGGTACTACTA TGCTTGTTAACGTGTGGGCAATCGGTAGAGACCCTAAGTATTGGGAGGACGCTGAGACAT TTAGACCCGAGCGATTTGAGGATGGACATATAGACTTCAAAGGAACAGATTTTGAATTTA TACCGTTTGGAGCTGGGCGAAGGATGTGCCCTGGTATGGCATTTGCAGAAGCAATCATGG AGCTCGTTCTAGCCTCGCTTCTCTATCACTTTGATTGGGAGCTTCCTGATGGGATCTCGC CGACCAAGGTGGACATGATGGAGGAGTTGGGTGCAACTATTCGAAAAAAGAATGATCTTT ATCTCGTTCCAACTGTTCGTGTGCCTATGTCGACTGCCCTATAGCTGTTTACACTTAAGA AATAGTATGTTTGTCTCGTATGTACGTGTCTAAATGATAAGCTATGTAACTTTTGATGAT GTGTACTCCTACTTCCTATCCTACCTATTATAAATTATTATTTAAGTTTAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_8950#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 599
fasta sequence
                              [AAGGTTACATCCTGTAGTGCCACTACTTCTCCCTAGGGAATGTCGGGAGACATGTGAGGTCATGGGTTACGATATCCCCATAGGTATTACTGTGCTCGTTAACGTATGGGCAATAGGTAGAGATCCTAAGTATTGGGAGGATGCTGAGACATTCATACCTGAACGATTTGAGGATGGCCATATAGACTTCAAAGGAACAAACTTTGAATTTATACCGTTTGGAGCTGGACGAAGGATGTGCCCTGGCATGGCATTTGCAGAAGTAATCATGGAGCTTGCTCTAGCCTCATTGCTTTACCACTTTGATTGGGAGCTCCCTGATGGCATCTCGCCAACCAAGATGGACATGATGGAGGAGTTGGGTGCTACAATTCGAAGAAAGAACGATCTTTACCTTATTCCTGCTGTCCGTGTGCCTTTGTCAACTGTCTTATAGTTGTTTACACTTACAAATAGTATGTTTGTCTCGTATGTACGTGGGTAAACAATAATCAAGGCATGGCATAATCACAAGTAGGATGTTCATAACTGCATGCAATTTTATTTGTAAACAAAACAATTTCGCAATTGGGACCAATATATTCAAGGAATAGTGATGA]

[+] EMBL CB096493             [AAGGTTACATCCTGTAGTGCCACTACTTCTCCCTAGGGAATGTCGGGAGACATGTGAGGTCATGGGTTACGATATCCCCATAGGTATTACTGTGCTCGTTAACGTATGGGCAATAGGTAGAGATCCTAAGTATTGGGAGGATGCTGAGACATTCATACCTGAACGATTTGAGGATGGCCATATAGACTTCAAAGGAACAAACTTTGAATTTATACCGTTTGGAGCTGGACGAAGGATGTGCCCTGGCATGGCATTTGCAGAAGTAATCATGGAGCTTGCTCTAGCCTCATTGCTTTACCACTTTGATTGGGAGCTCCCTGATGGCATCTCGCCAACCAAGATGGACATGATGGAGGAGTTGGGTGCTACAATTCGAAGAAAGAACGATCTTTACCTTATTCCTGCTGTCCGTGTGCCTTTGTCAACTGTCTTATAGTTGTTTACACTTACAAATAGTATGTTTGTCTCGTATGTACGTGGGTAAACAATAATCAAGGCATGGCATAATCACAAGTAGGATGTTCATAACTGCATGCAATTTTATTTGTAAACAAAACAATTTCGCAATTGGGACCAATATATTCAAGGAATAGTGATGA]


>consensus_8950#1 AAGGTTACATCCTGTAGTGCCACTACTTCTCCCTAGGGAATGTCGGGAGACATGTGAGGT CATGGGTTACGATATCCCCATAGGTATTACTGTGCTCGTTAACGTATGGGCAATAGGTAG AGATCCTAAGTATTGGGAGGATGCTGAGACATTCATACCTGAACGATTTGAGGATGGCCA TATAGACTTCAAAGGAACAAACTTTGAATTTATACCGTTTGGAGCTGGACGAAGGATGTG CCCTGGCATGGCATTTGCAGAAGTAATCATGGAGCTTGCTCTAGCCTCATTGCTTTACCA CTTTGATTGGGAGCTCCCTGATGGCATCTCGCCAACCAAGATGGACATGATGGAGGAGTT GGGTGCTACAATTCGAAGAAAGAACGATCTTTACCTTATTCCTGCTGTCCGTGTGCCTTT GTCAACTGTCTTATAGTTGTTTACACTTACAAATAGTATGTTTGTCTCGTATGTACGTGG GTAAACAATAATCAAGGCATGGCATAATCACAAGTAGGATGTTCATAACTGCATGCAATT TTATTTGTAAACAAAACAATTTCGCAATTGGGACCAATATATTCAAGGAATAGTGATGA



consensusID : consensus_8950#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 427
fasta sequence
                              [ATTTGCAACGTGTTTTAAGTCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTTGTCTTCCCTTTCCTTACCTTTTCTTTAACAGAAGGGGCAATTTCGGGGCCGTTAATTTAATTTCCCCTTTTAGGGAGTCTTTTTACATTTAATGGGCCGTCTTTTAACAACGTGGGGATTGGAAAAACCTTGGGTTTCCCCAATTTATTCCCTTTGAAAAAATTCCCCTTTTCCCCAGTTGGCTTATTACCAAAAAGGCCCGCCCCAATCCCCTTTCCAAAAATTTGCCCACCTTTTCCTTCCGGAATTTAAGGGTTTACCCTTTTAAAAAAAAAACCCGTTTTCGTTTGTTTGGGGTTGTCCAAAGGGTTTTTTTTGCCCC]

[+] EMBL CF331406             [ATTTGCAACGTGTTTTAAGTCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTTGTCTTCCCTTTCCTTACCTTTTCTTTAACAGAAGGGGCAATTTCGGGGCCGTTAATTTAATTTCCCCTTTTAGGGAGTCTTTTTACATTTAATGGGCCGTCTTTTAACAACGTGGGGATTGGAAAAACCTTGGGTTTCCCCAATTTATTCCCTTTGAAAAAATTCCCCTTTTCCCCAGTTGGCTTATTACCAAAAAGGCCCGCCCCAATCCCCTTTCCAAAAATTTGCCCACCTTTTCCTTCCGGAATTTAAGGGTTTACCCTTTTAAAAAAAAAACCCGTTTTCGTTTGTTTGGGGTTGTCCAAAGGGTTTTTTTTGCCCC]


>consensus_8950#2 ATTTGCAACGTGTTTTAAGTCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTTGTCTTCCCTTTCCTT ACCTTTTCTTTAACAGAAGGGGCAATTTCGGGGCCGTTAATTTAATTTCCCCTTTTAGGG AGTCTTTTTACATTTAATGGGCCGTCTTTTAACAACGTGGGGATTGGAAAAACCTTGGGT TTCCCCAATTTATTCCCTTTGAAAAAATTCCCCTTTTCCCCAGTTGGCTTATTACCAAAA AGGCCCGCCCCAATCCCCTTTCCAAAAATTTGCCCACCTTTTCCTTCCGGAATTTAAGGG TTTACCCTTTTAAAAAAAAAACCCGTTTTCGTTTGTTTGGGGTTGTCCAAAGGGTTTTTT TTGCCCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8950#0      GGCCATGGTGCAATACGTCACCGGCTACCTGTGCCTCTCCTTGGCTCTCCTCTTGCTCAC 60
consensus_8950#1      ------------------------------------------------------------
consensus_8950#2      ------------------------------------------------------------
                                                                                  

consensus_8950#0      TCTCGTCCTCCACAAGGTGGCGAGGAAGGCGACCGGTAATGGCGCCGGCAAGCCGAGGCT 120
consensus_8950#1      ------------------------------------------------------------
consensus_8950#2      ------------------------------------------------------------
                                                                                  

consensus_8950#0      TCCGCCGGGGCCGTGGCGGCTGCCGGTCATCGGCAACCTCCACCAGGTCGCGATGGGCGG 180
consensus_8950#1      ------------------------------------------------------------
consensus_8950#2      ------------------------------------------------------------
                                                                                  

consensus_8950#0      CCCGCTCGTCCACCGCACCATGGCCGACCTGGCGCGCCGGCTGGACGCGCCGCTCATGTC 240
consensus_8950#1      ------------------------------------------------------------
consensus_8950#2      ------------------------------------------------------------
                                                                                  

consensus_8950#0      GCTCAGGCTCGGCGAGCTCCGCGTCGTCGTCGCCTCATCCGCCAACGCCGCCAGGGAGAT 300
consensus_8950#1      ------------------------------------------------------------
consensus_8950#2      ------------------------------------------------------------
                                                                                  

consensus_8950#0      CACCAAGACGCACGACGTCGCGTTCGCGACGCGGCCGTGGACCTCCACCATCCGCGTCCT 360
consensus_8950#1      ------------------------------------------------------------
consensus_8950#2      ------------------------------------------------------------
                                                                                  

consensus_8950#0      GATGAGCGACGGCGTTGGGCTGGTGTTCGCGCCCTACGGCGCGCTGTGGCGGCAGCTCCG 420
consensus_8950#1      ------------------------------------------------------------
consensus_8950#2      ------------------------------------------------------------
                                                                                  

consensus_8950#0      CAAGATCGCCGTGGTGGAGCTCCTCAGCGCGCGCCGCGTCCAGTCGTTCCGCCGCATCCG 480
consensus_8950#1      ------------------------------------------------------------
consensus_8950#2      ------------------------------------------------------------
                                                                                  

consensus_8950#0      GGAGGACGAGGTCGGCCGCCTCGTCGCCGCCGTCGCCGCCGCCCCGGCGGCGCAGCCCGT 540
consensus_8950#1      ------------------------------------------------------------
consensus_8950#2      ------------------------------------------------------------
                                                                                  

consensus_8950#0      GAACGTCAGCGAGCGGATCGCGGCGCTCATCTCCGACTCGGCGGTGCGCACCATCATGGG 600
consensus_8950#1      ------------------------------------------------------------
consensus_8950#2      ------------------------------------------------------------
                                                                                  

consensus_8950#0      CGACAGGTTCGAGAAGCGGGACGAATTCCTGGGAGGGTCTCGCCGAGGGGGACAGGATAG 660
consensus_8950#1      ------------------------------------------------------------
consensus_8950#2      ------------------------------------------------------------
                                                                                  

consensus_8950#0      CCTCCGGGTTCAGCCTCGGCGACCTGTTCCCGTCGTCGAGGCTGGCCAGCTTCGTCGGCG 720
consensus_8950#1      ------------------------------------------------------------
consensus_8950#2      ------------------------------------------------------------
                                                                                  

consensus_8950#0      GCACGACGCGGCGGGCGGAGGCGAACCACCGCAAGAACTTCGGGCTGATAGAGTGCGCTC 780
consensus_8950#1      ------------------------------------------------------------
consensus_8950#2      ------------------------------------------------------------
                                                                                  

consensus_8950#0      TCAGGCAGCACGAGGAGCGGAGGGCCGCCGGCGCCGTGGACGACGACGAGGACCTCGTCG 840
consensus_8950#1      ------------------------------------------------------------
consensus_8950#2      ------------------------------------------------------------
                                                                                  

consensus_8950#0      ATGTGCTTCTCAGGGTTCAGAAGGAAGGGAGCCTCCAAGTGCCCCTCACCATGGGCAATA 900
consensus_8950#1      ------------------------------------------------------------
consensus_8950#2      ------------------------------------------------------------
                                                                                  

consensus_8950#0      TCAAAGCCGTTATCCTTGAACTTTTTGGTGCTGGGAGCGAGACATCAGCAAGTACACTTC 960
consensus_8950#1      ------------------------------------------------------------
consensus_8950#2      ------------------------------------------------------------
                                                                                  

consensus_8950#0      ATTGGGCGATGACTGAGCTCATAATGAATCCAAAAGTGATGCTGAAGGCACAAGATGAGT 1020
consensus_8950#1      ------------------------------------------------------------
consensus_8950#2      ------------------------------------------------------------
                                                                                  

consensus_8950#0      TAAGTAACGTCATCAAAGGAAAGCAAACAATATCTGAAGATGACTTAGTTGAACTGAGGT 1080
consensus_8950#1      ------------------------------------------------------------
consensus_8950#2      ------------------------------------------------------------
                                                                                  

consensus_8950#0      ACTTAAAACTTGTTATCAAAGAGACCTTAAGGTTACATCCTGTGGTGCCACTACTTCTCC 1140
consensus_8950#1      ----------------------------AAGGTTACATCCTGTAGTGCCACTACTTCTCC 32
consensus_8950#2      ------------------------------------------------------------
                                                                                  

consensus_8950#0      CTAGGGAATGTCGGGAGACATGTGAGGTCATGGGGTACGATATCCCCATAGGTACTACTA 1200
consensus_8950#1      CTAGGGAATGTCGGGAGACATGTGAGGTCATGGGTTACGATATCCCCATAGGTATTACTG 92
consensus_8950#2      -------------------------ATTTGCAACGTGTTTTAAGTCTGAAAAAAAAAAAA 35
                                                 *       *    **   *   *   *  *   

consensus_8950#0      TGCTTGTTAACGTGTGGGCAATCGGTAGAGACCCTAAGTATTGGGAGGACGCTGAGACAT 1260
consensus_8950#1      TGCTCGTTAACGTATGGGCAATAGGTAGAGATCCTAAGTATTGGGAGGATGCTGAGACAT 152
consensus_8950#2      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 95
                              **         **     * * *    **  *     *  *     * * * 

consensus_8950#0      TTAGACCCGAGCGATTTGAGGATGGACATATAGACTTCAAAGGAACAGATTTTGAATTTA 1320
consensus_8950#1      TCATACCTGAACGATTTGAGGATGGCCATATAGACTTCAAAGGAACAAACTTTGAATTTA 212
consensus_8950#2      AAAAACCCT--TGTCTTCCCTTTCCTTACCTTTTCTTTAACAGAAGGGGC----AATT-- 147
                        * ***     *  **     *    *  *   *** **  ***         ****  

consensus_8950#0      TACCGTTTGGAGCTGGGCGAAGGATGTGCCCTGGTATGGCATTTGCAGAAGCAATCATGG 1380
consensus_8950#1      TACCGTTTGGAGCTGGACGAAGGATGTGCCCTGGCATGGCATTTGCAGAAGTAATCATGG 272
consensus_8950#2      ------TCGGGGCCGTTAATTTAATTTCCCCTTTTAGGGAGTCTTTTTACATT-TAATGG 200
                            * ** ** *        ** * ****   * **  * *    *     * ****

consensus_8950#0      AGCTCGTTCTAGCCTCGCTTCTCTATCACTTTGATTGGGAGCTTCCTGATGGGATCTCGC 1440
consensus_8950#1      AGCTTGCTCTAGCCTCATTGCTTTACCACTTTGATTGGGAGCTCCCTGATGGCATCTCGC 332
consensus_8950#2      GCCGTCTTTTAACAACGTGGGGATTGGAAAAACCTTGGGT-TTCCCCAATTTATTCCCTT 259
                        *    * ** *  *       *   *      *****   * **  **    ** *  

consensus_8950#0      CGACCAAGGTGGACATGATGGAGGAGTTGGGTGCAACTATTCGAAAAAAGAATGATCTTT 1500
consensus_8950#1      CAACCAAGATGGACATGATGGAGGAGTTGGGTGCTACAATTCGAAGAAAGAACGATCTTT 392
consensus_8950#2      TGAAAAAATTCCCCTT--TTCCCCAGTTGGCT--TATTACC--AAAAAGGCCCGCCCCAA 313
                        *  **  *   * *  *     ****** *   *  *    ** ** *   *  *   

consensus_8950#0      ATCTCGTTCCAACTGTTCGTGTGCCTATGTCGACTGCCCTATAGCTGTTTACACTTAAGA 1560
consensus_8950#1      ACCTTATTCCTGCTGTCCGTGTGCCTTTGTCAACTGTCTTATAGTTGTTTACACTTAC-A 451
consensus_8950#2      TCCCCTTTCCAAAAATTTGCCCACCTTTTCCTTCCGGAATTTAAGGGTTTACCCTTTTAA 373
                        *   ****     *  *    *** *  *  * *   * **   ****** ***   *

consensus_8950#0      AATAGTATGTTTGTCTCGTATGTACGTGTCTAAATGATAAGCTATGTAACTTTTGATGAT 1620
consensus_8950#1      AATAGTATGTTTGTCTCGTATGTACGTGGGTAAACAATAATCAAGGCATGGCATAATCAC 511
consensus_8950#2      AAAAAAAACCCGTTTTCGTTTGTTTGGGGTTGTCCAAAGGGTTTTTTTTGCCCC------ 427
                      ** *  *      * **** ***  * *  *     *                       

consensus_8950#0      GTGTACTCCTACTTCCTATCCTACCTATTATAAATTATTATTTAAGTTTAAAAAAAAAAA 1680
consensus_8950#1      AAGTAG---GATGT----TCATAACTGC-ATGCAATTTTATTTG----TAAACAAAACAA 559
consensus_8950#2      ------------------------------------------------------------
                                                                                  

consensus_8950#0      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1732
consensus_8950#1      TTTCGCAATTGGGACCAATATATTCAAGGAATAGTGATGA------------ 599
consensus_8950#2      ----------------------------------------------------
                                                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)