These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8975#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2158 fasta sequence [CAGGAATTCCCGGGTCAGACACCACAGCGTCCAGGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCACATTGGAGGGCAAGTCTGGTGCACAGCAGCCGCGGTAATTCCAGCTCACAATGAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACATTGGGCCGGCCGCCAGGTCCAGCACTCACGGCAGAGCACCGACACTGCTCGACCACTTCTGCACGGCAGATGCGCTCCATGGCCTTAACTGGCCAGGGTCGTGCACTCCGGCCCGTTACTTTGAAGAAATTAGAGTGAATCAAAGCAAGCCATCAGCTCTGGATACATTTAGCATGGGATAACATCATAGGATTCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAACATTTGCCAAGGATGTTTTCATTAATCAAAAACGAAAGTTGGGGGCTCGAAGACGATCAGATCTTGGACGCTGATTACTACAGGAGGCGGCGGCGGGTAGAAAAGGAAGATGGGATGAATTTTATTGAATCTATCTTTTCATTTGTATTTGGAGATGGTGATCCAAATGATGGTCTTGAAGATAAGAGGTGGAAGATGATTGGGCAATATATTTCATCGAATGGTGGAGTTGTCACGGCAGAAGAACTAGCACCGTATCTTGATGTGCCACCAATTTCAGAACAATCCAAGGATGATGAATCATTTATTCTTCCAGTTCTATTACGCTTCCAGGGACACCCAGAAGTTGATGAACAGGGAAACATTCTTTATAGGTTTCCATCACTGCAACGTACTGCTTCATCAAAAGGAAGTGGGGTTAGAGAATATGTTGGTAACAAATGGTCTGCTATGTTTAGCAGTGTTGAAAAGTACTTAGAGGAGAAACCATGGAAATTCAGCAAAGCAAATGCATCTGAAAGGGCAATGGTTGCTGGTTTGGGAGGACTCAATCTTTTTGGTGTGATCATTCTTGGGAACCTGTTGAAGCAAATGACAGTGCCACCTGGTGGACTTATCTCATTTGTTGCGCAACTGTTTCCTTTGCTTCAGGTATATGCTGGTTCCTTTTTTGCAATACCGTTGTTTAGATGGTTTCTACTCCGCAAGACCAACAATGACATTGAAAGGAGGAACAAGGCCAGAGAACAGCGAGCTCAGGAACTTGCATTGCCAGAATCTTCTCTCAGAAGAAAGTTACTCAGTGCACGCGACATGGCTCAACGTAAGGTAATTACTCCAGAGGAGATCGTCTACACTACCGAAAAGGATCTTTTGGATCAGGATTATGAAGTCAAGGAATGGGAAAAGAGATTTAAGGAGCTTGAATCAGACTGATGGAAATACTTGGCTTTCATGCTATCCCTTCATGGTCCTTTGGTCTGCTTGGATGGTCATTTTTATCAGCATCCAATTGAT-TGG-TGGATATATCTGACTAAACCATTAAATCAAGTGGCGCAACGTCTAACTGGACTGGATGGTTCTGACACCCATTGATAGGCGCGCACTATTTCGACCTTGAAATTTTTGTGTAAACTGTTAGTCAATTTGCATTGATCAAGGTCTGCAGCTGATGTACATATCTGTAACGTTTAGCAGCATATTTGTATAGGTAGTTCAGTGCACAGGAGCAGTGAACCACAAAGTTCAGAATTCGACATGGGTACCAGGGACCATTCTTTATGGATGGAGAAGGATAGCCGGAAAAGTAAAAGATTATGCCATTACTGGGGCACCAGACTTGGTCATTCTGGTTTCTGTATCGCTGAAACTTTACTGGTGATCATGCACAAGTCTTATGCTTTACACAGGCATGTTAGAACATTCAGGGGAAAATCAATTCCTGATTGGTGAGAAACAGTAATTGTGTATAGGAGCTGTGCAAGAATATACGTCCAGATTCCAGACCTTAGATGCCAGAATAGAACAAGATCATTTATAAATCCCAAAAGAATGTGATACGCTTACAACTGATGATTTGCTATGTATTATCGACCAATGACAATTCTTCTGTATGACTCTTCCTCTGTAACACTGTAAGACGAAAGGCAGTGCAAGCCTGGTGGGTT] [+] EMBL BI800174 [CAGGAATTCCCGGGTCAGACACCACAGCGTCCAGGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCACATTGGAGGGCAAGTCTGGTGCACAGCAGCCGCGGTAATTCCAGCTCACAATGAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACATTGGGCCGGCCGCCAGGTCCAGCACTCACGGCAGAGCACCGACACTGCTCGACCACTTCTGCACGGCAGATGCGCTCCATGGCCTTAACTGGCCAGGGTCGTGCACTCCGGCCCGTTACTTTGAAGAAATTAGAGTGAATCAAAGCAAGCCATCAGCTCTGGATACATTTAGCATGGGATAACATCATAGGATTCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAACATTTGCCAAGGATGTTTTCATTAATCAAAAA ] [+] EMBL AK060846 [ GGGATAACATCATAGGATTCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATCTTGGACGCTGATTACTACAGGAGGCGGCGGCGGGTAGAAAAGGAAGATGGGATGAATTTTATTGAATCTATCTTTTCATTTGTATTTGGAGATGGTGATCCAAATGATGGTCTTGAAGATAAGAGGTGGAAGATGATTGGGCAATATATTTCATCGAATGGTGGAGTTGTCACGGCAGAAGAACTAGCACCGTATCTTGATGTGCCACCAATTTCAGAACAATCCAAGGATGATGAATCATTTATTCTTCCAGTTCTATTACGCTTCCAGGGACACCCAGAAGTTGATGAACAGGGAAACATTCTTTATAGGTTTCCATCACTGCAACGTACTGCTTCATCAAAAGGAAGTGGGGTTAGAGAATATGTTGGTAACAAATGGTCTGCTATGTTTAGCAGTGTTGAAAAGTACTTAGAGGAGAAACCATGGAAATTCAGCAAAGCAAATGCATCTGAAAGGGCAATGGTTGCTGGTTTGGGAGGACTCAATCTTTTTGGTGTGATCATTCTTGGGAACCTGTTGAAGCAAATGACAGTGCCACCTGGTGGACTTATCTCATTTGTTGCGCAACTGTTTCCTTTGCTTCAGGTATATGCTGGTTCCTTTTTTGCAATACCGTTGTTTAGATGGTTTCTACTCCGCAAGACCAACAATGACATTGAAAGGAGGAACAAGGCCAGAGAACAGCGAGCTCAGGAACTTGCATTGCCAGAATCTTCTCTCAGAAGAAAGTTACTCAGTGCACGCGACATGGCTCAACGTAAGGTAATTACTCCAGAGGAGATCGTCTACACTACCGAAAAGGATCTTTTGGATCAGGATTATGAAGTCAAGGAATGGGAAAAGAGATTTAAGGAGCTTGAATCAGACTGATGGAAATACTTGGCTTTCATGCTATCCCTTCATGGTCCTTTGGTCTGCTTGGATGGTCATTTTTATCAGCATCCAATTGAT TGG TGGATATATCTGACTAAACCATTAAATCAAGTGGCGCAACGTCTAACTGGACTGGATGGTTCTGACACCCATTGATAGGCGCGCACTATTTCGACCTTGAAATTTTTGTGTAAACTGTTAGTCAATTTGCATTGATCAAGGTCTGCAGCTGATGTACATATCTGTAACGTTTAGCAGCATATTTGTATAGGTAGTTCAGTGCACAGGAGCAGTGAACCACAAAGTTCAGAATTCGACATGGGTACCAGGGACCATTCTTTATGGATGGAGAAGGATAGCCGGAAAAGTAAAAGATTATGCCATTACTGGGGCACCAGACTTGGTCATTCTGGTTTCTGTATCGCTGAAACTTTACTGGTGATCATGCACAAGTCTTATGCTTTACACAGGCATGTTAGAACATTCAGGGGAAAATCAATTCCTGATTGGTGAGAAACAGTAATTGTGTATAGGAGCTGTGCAAGAATATACGTCCAGATTCCAGACCTTAGATGCCAGAATAGAACAAGATCATTTATAAATCCCAAAAGAATGTGATACGCTTACAACTGATGATTTGCTATGTATTATCGACCAATGACAATTCTTCTGTATGACTCTTCCTCTGTAACACTGTAAGACGAAAGGCAGTGCAAGCCTGGTGGGTT] [+] EMBL CA764767 [ AGCACCGTATCTTGATGTGCCACCAATTTNAGAACAATCCAAGGATGATGAATC TTTATTCTTCCAGTTCTATTACGCTTCCAGGGACACCCAGAAGTTGATGAACAGGGAAACATTCTTTATAGGTTTCCATCACTGCAACGTACTGCTTCATCAAAAGGAAGTGGGGTTAGAGAATATGTTGGTAACAAATGGTCTGCCATGTTTAGCAGTGTTGAAAAGTACTTAGAGGAGAAACCATGGAAATTCAGCAAAGCAAATGCATCTGAAAGGGCAATGGTTGCTGGTTTGGGAGGACTCAATCTTTTTGGTGTGATCATTCTTGGGAACCTGTTGAAGCAAATGACAGTGCCACCTGGTGGACCTATCTCATTTGTTGCGCAACTGTTTCCTTTGCTTCAGGTATATGCTGGTTCCTTTTTTGCAATACCGTTGTTTAGATGGTTTCTACTCCGCAAGACCAACAATGACATTGAAAGGAGGAACAAGGCCAGAGAACAGCGAGCTCAGGAACTTGCATTGCCAGAATCTTCTCTCAGAAGAAAGTTACTCAGTGCACGCGACATGGCTCAACGTAAGGTAATTACTCCAGAGGAGATCGTCTACACTACCGAAAAGGATCTTTTGGATCAGGATTATGAAGTCAAGGAATGGGAAAAGAGATTTAAGGAGCTTGAATCAGACTGATGGAAATACTTGGCTTTCATGCTATCCCTTCATGGTCCTTTGGTCTGCTTGGATGGTCATTTTTATCAGCATCCAATTGAT TGG TGGATATATCTGACTAAACCATTAAATCAAGTGGCGCAAC ] [+] EMBL CB000786 [ gcAAGCAAATGCATCTGAAAGGGCAATGGTTGCTGGTTTGGGAGGACTCAATCTTTTTGGTGTGATCGTTCTTGGGAACCTGGTGAAGCAAATGACAGTGCCACCTGGTGGACTTATCTCATTTGTTGCGCAACTGTTTCCTTTGCTTCAGGTATATGCTGGTTCCTTTTTTGCAATACCGTTGTTTAGATGGTTTCTACTCCGCAAGACCAACAATGACATTGAAAGGAGGAACAAGGCCAGAGAACAGCGAGCTCAGGAACTTGCATTGCCAGAATCTTCTCTCAGAAGAAAGTTACTCAGTGCACGCGACATGGCTCAACGTAAGGTAATTACTCCAGAGGAGATCGTCTACACTACCGAAAAGGATCTTTTGGATCACGATTATGAAGTCAAGGAATGGGAAAAGAGATTTAAGGAGCTTGAATCAGACTGATGGAAATACTTGGCTTTCATGCTATCCCTTCATGGTCCTTTGGTCTGCTTGGATGGTCATTTTTATCAGCATCCAATTGAT TGG TGGATATAT ] [+] EMBL AA749891 [ GTTGCTGGTTTGGGAGGACACAATCTTTTTGGTGAGATCATTCTTGGGAACCTGTTGAAGCAAATGAGAATGCCACCTGGT GACTTATCTCATTTGTTGCGCAACTGTTTCCTTTGCTTCAGGTATATGCTGGTTCCTTTTTTGCAATACCGTTGTTTAGATGGTTTCTACT CACAAGACCAACAATGACATTGAAAGGAGGAACAAGGCCAGAGAtagcag ] [+] EMBL AU101809 [ GGAATGGGAAAAGAGATTTAAGGAGCTTGAATCAGACTGATGGAAATACTTGGCTTTCATGCTATCCCTTCATGGTCCTTTGGTCTGCTTGGATGGTCATTTTTATCAGCATCCAATTGATNTGGNTGGATATATCTGACTAAACCATTAAATCAAGTGGCGCAACGTCTAACTGGACTGGATGGTTCTGACACCCATTGATAGGCGCGCACTATTTCGACCTTGAAATTTTTGTGTAAACTGTTAGTCAATTTGCATTGATCAAGGTCTGCAGCTGATGTACATATCTGTAACGTTTAGCAGCATATTTGTATAGGTAGTTCAGTGCACAGGAGCAGTGAACCACAAAGTTCAGAATTCGACATGGGTACCAGGGACCATTCTTTATGGATGGAGAAGGATAGCCGGAAAAGTAAAAGATTATGCCATTACTGGGGCATCAGACTTGGTCAaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||