These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8994#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1122 fasta sequence [TGCCCTCCAAATAAAGTAAACCCGCGCGAGCCGCCACCGGTGAGGCTCCCGTCGCCGTCCGTACCCCGGCTCCCGGCGACCGCCGCCACCACCACCCAGGGTCCCCGCTTCGTAGGCGAGGGGGGAGGAGGAGACGACGCCATGGGGTTCTGGGAAGCCTTCCTCAACTGGCTCCGCAGTCTTTTTTTCAAGCAAGAGATGGAGCTTTCCTTGATAGGGCTTCAAAATGCTGGGAAAACATCGCTTGTGAATGTCATTGCTACAGGAGGCTTTAGTGAGGACATGATTCCTACTGTAGGATTCAACATGAGAAAGGTGACCAAAGGTAATGTCACAATAAAATTGTGGGATCTTGGAGGCCAGCCAAGATTCCGTAGCATGTGGGAGAGATACTGTCGTGCAGTTTCTGCAATTGTGTATGTTGTGGATGCAGCCGATCGAGAGAACATGGCTATTGCCAAAAGCGAGCTCCATGATCTTCTGAGCAAGCCTTCTTTGACTGGGATCCCATTACTAGTCATTGGCAATAAAATTGACAAACCTGAAGCTTTCCCTAAGCAAAGCTTCACAGACGTAATGGGGCTAAAGACAATCACTGACCGAGAAGTGGCATGCTTCATGATATCATGCAAGAACTCGACAAACATTGACTCTGTCATCGACTGGCTCGTGAAGCACTCAAAAAAGAAGAATTGATC-TAAATTTTTAGCTTTTGAAGTACGCAGATTCTCTCTTTTTGCATGTTGCGTAGCACTTGGCCTGTAAATTATGCAAGAGTTATTGTTGATCAGGGAGGTTGTGTTCATAATTTTGT-AACCTGCTTTGGCATTATATTGGCAGACTGCATCTGGTATTGTGCACGCATGTGCTTCCTTCCGACTTACAA-GAGGTTCCACCCTC-GTGTTGCATACTTGCTTGGTGAATTTGAAATTATGCGTGATTTGTGGATCATATTGTTTACTTTGGATGAAACTAAAGGGAGACAAAAATGTTGATAAATCGATGCTGCAATGAATTGCAAATTTGTGCTTGAGACTCTGAGAGTAATAATATGTAGCATGAGAGAAATATTTAAACTATGTATTTGGTTCTTTTAAGTGAATTGCATCATCCTGGGAAAAA] [+] EMBL AK112007 [TGCCCTCCAAATAAAGTAAACCCGCGCGAGCCGCCACCGGTGAGGCTCCCGTCGCCGTCCGTACCCCGGCTCCCGGCGACCGCCGCCACCACCACCCAGGGTCCCCGCTTCGTAGGCGAGGGGGGAGGAGGAGACGACGCCATGGGGTTCTGGGAAGCCTTCCTCAACTGGCTCCGCAGTCTTTTTTTCAAGCAAGAGATGGAGCTTTCCTTGATAGGGCTTCAAAATGCTGGGAAAACATCGCTTGTGAATGTCATTGCTACAGGAGGCTTTAGTGAGGACATGATTCCTACTGTAGGATTCAACATGAGAAAGGTGACCAAAGGTAATGTCACAATAAAATTGTGGGATCTTGGAGGCCAGCCAAGATTCCGTAGCATGTGGGAGAGATACTGTCGTGCAGTTTCTGCAATTGTGTATGTTGTGGATGCAGCCGATCGAGAGAACATGGCTATTGCCAAAAGCGAGCTCCATGATCTTCTGAGCAAGCCTTCTTTGACTGGGATCCCATTACTAGTCATTGGCAATAAAATTGACAAACCTGAAGCTTTCCCTAAGCAAAGCTTCACAGACGTAATGGGGCTAAAGACAATCACTGACCGAGAAGTGGCATGCTTCATGATATCATGCAAGAACTCGACAAACATTGACTCTGTCATCGACTGGCTCGTGAAGCACTCAAAAAAGAAGAATTGATC TAAATTTTTAGCTTTTGAAGTACGCAGATTCTCTCTTTTTGCATGTTGCGTAGCACTTGGCCTGTAAATTATGCAAGAGTTATTGTTGATCAGGGAGGTTGTGTTCATAATTTTGT AACCTGCTTTGGCATTATATTGGCAGACTGCATCTGGTATTGTGCACGCATGTGCTTCCTTCCGACTTACAA GAGGTTCCACCCTC GTGTTGCATACTTGCTTGGTGAATTTGAAATTATGCGTGATTTGTGGATCATATTGTTTACTTTGGATGAAACTAAAGGGAGACAAAAATGTTGATAAATCGATGCTGCAATGAATTGCAAA ] [-] EMBL BE040443 [ ATGGATATTGCCAANAGCGAGCTCCATGATCTTCTGAGCAAGCCTTCTTTGACTGGGATCCCATTACTAGTCATTGGCAATAAAATTGACAAACCTGAAGCTTTCCCTAAGCAAAGCTTCACAGACGTAATGGGGCTAAAGACAATCACTGACCGAGAAGTGGCATGCTTCATGATATCATGCAAGAACTCGACAAACATTGACTCTGTCATCGACTGGCTCGTGAAGCACTCAAAAAAGAAGAATTGATC TAAATTTTTAGCTTTTGAAGTACGCAGATTCTCTCTTTTTGCATGTTGCGTAGCACTTGGCCTGTAAATTATGCAAGAGTTATTGTTGATCAGGGAGGTTGTGTTCATAATTTTGT AACCTGCTTTGGCATTATATTGGCAGACTGCATCTGGTATTGTGCACGCATGTGCTTCCTTCCGACTTACAA GAGGTTCCACCCTC GTGTTGCATACTTGCTTGGTGAATTTGAAATTATGCGTGATTTGTGGATCATATTGTTTACTCTGGATGA ] [+] EMBL BQ908135 [ AAAGCTTCACAGACGTAATGGGGCTAAAGACAATCACTGACCGAGAAGTGGCATGCTTCATGATATCATGCAAGAACTCGAC AACATTGACTCTGTCATCGACTGGCTCGTGAAGCACTCAAAAAAGAAGAATTGATCGTAAATTTTTAGCTTTTGAAGTAC CAGATTCTCTCTTTTTGCATGTTGCGTAGCACTTGGCCTGTAAATTA GCAAGAGTTATTGTTGATCAGGGA GTTGTGTTCATAATTTTGTAAACCNGCTTTGGCATTATATT GCAGACTGCATCTGGTATTGTGCACGCATGTGCTTCCTTCCGACTTACAA GAGGTTCCACCCTC GTGTTGCATACTTGCTTGGTGAATTTGAAAaaaaaa ] [+] EMBL BM414930 [ aGCTTCATTCCGACTTACAA GAGGTTCCACCCTCAGTGTTGCATACTTGGTTGGTGAATTTGAAATTATGCGTGATTTGTGGATCATATTGTTTACTTTGGATGAAACTAAAGGGAGACAAAAATGTTGATA ] [+] EMBL AU165172 [ TCCGACTTACAAGGAGGTTCCACCCTC GTGTTGCATACTTGCTTGGTGAATTTGAAATTATGCGTGATTTGTGGATCATATTGTTTACTTTGGATGAAACTAAAGGGAGACAAAAATGTTGATAAATCGATGCTGCAATGAATTGCAAATTTGTGCTTGAGACTCTGAGAGTAATAATATGTAGCATGAGAGAAATATTTAAACTATGTATTTGGTTCTTTTAAGTGAATTGCATCATCCTGGGAAAAA] [+] EMBL AU165199 [ TCCGACTTACAA GAGGTTCCACCCTC GTGTTGCATACTTGCTTGGTGAATTTGAAATTATGCGTGATTTGTGGATCATATTGTTTACTTTGGATGAAACTAAAGGGAGACAAAAATATTGATAAATCGATGCTGCAATGAATTGCAAATTTGTGCTTGAGACTCTGAGAGTAATAATATGTAGCATGAGAGAAATATTTAAACTAaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||