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Oryza sativa
cluster # 9002 cluster # 9002       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9002#0 length = 2852 sequences # 4  
consensus_9002#1 length = 575 sequences # 2  

consensusID : consensus_9002#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2852
fasta sequence
                              [CGCCATCTTCACGATCTCCGTCTCCCATCCCCGCCTCGCCGCGCCGCGCCCTCCTCCTCCTCCTCCTCCCACCCCGCCGAGCACTCACCCGCCGCCTCGGTTTCGTGCGCCTCTGCAGCGGCAGGCCGGGGGCGCGGGGCAGCGGTTGGCGTCGGCCGCGGCCGTGCTGTCATGGAGGATCTGGGCATCGAGGCGAAGGAGGCGGCCGTGCGCGAGGTGGCGAAGCTGCTCCCGCTCCCGGAGCTCCTCTCCTCCATTGCCTCCATCAAATCCGACTACCTCGCGCGGCAGCAGACAAATGATGCACAGCTCAGTACAATGGTAGCAGAGCAGGTATTCCTTGACATCTACTATGAACTGCCAAACTTATTAGTTTTAATGCTATTGTTAATGCTTTGCTCGAGTTACGGTTTCTGCTACTATCATTTGCATTCCCCCCTCAATGTTTGTCTGTTGGATTATAGTTTTTCTGTATGTGCATATTTTATCACTTATAGGTTGAGCAAGCCCATGCTGGCATCAATGCTCTTGCACTATCTCAGGAAACAATAAACAAACTACGCGAGAACTTCATAGATATAGACAAGTTGTGCCAGGAGTGTCAAACATTAATTGAGAACCACGACAAGATTAAGCTTCTTAGCAACGCAAGAAATAACCTGAACACAACTTTAAAGGATGTGGGAGGTATGATGTCTATTTCTGTTGAAGCAGCTGCAGCACGCGACTCGCTAAGTGATGATAAAGAGTTAATTCGCACTTATGAGAGATTAACAGCTCTTGATGGAAAGAGACGTTTTGCTTTAGCTGCTGCTGCATCTCACAAGGAAGAAGTTGGTCGATTGAGAGAGTACTTTGAAGATGTTGATCGTTCATGGGAAACATTTGAGAAAGCATTGTGGGGCCATGTCACTAACTTTTTCAGACTTTCAAAAGATAGCCCTCAGACGTTAGTTCGAGCAATAAGGGTTGTTGAAATGCAAGAGATCCTAGATCAACAAGTTGCAGAAGAAGCAGCTGAGGCTGAGGGTGCAGGTGCTATGGCGACAATAGCAAACCAGCGTAGAACTGCAAACAGGAAAGGTGGAGGAGCAACATCTACCCCAAGAAGCACTCAAGATAAATCAAAGGTCCAGGGAAAGGGCTACAAGGACAAATGCTATGAGTATATCAGGAAGGCTGTTGAGGCTCGCTTCGACAAACTGCTCACCGAGCTTGTTTTCTCAGAAGATTTGATGGAAGCTTTGGAGGAAGCTAAGGCAATTGGAGATGAGCTTGGTGATATCTATGACTATGTTGCACCATGTTTTCCTCCTAGATATGAAATTTTCCAGCTCATGGTAAACCTGTATACTGAAAGGTTCATCCAGATGCTAAGACTTCTCAGTGATAGAGCAAATGATATTCCAAATATAAATATTCTTAAGGTAACAGGTTGGGTTGTGAAATACCAAGAAAATCTTATCGGTCTTGGTGTGGACGAGTCTCTTGCCCAAGTTTGTTCAGAAAGTGGTGCATTGGATCCCCTCATGAATATGTATGTCGAACGTATGCAAGCAACAACTAAGAAATGGTACAGTAACATTTTGGAGGCTGACAAAACACAACCACCAAAAAGTACAGAGGATGGGAAACTATATACACCTGCAGCTGTGGATTTGTTCAGAATATTGACTGAGCAAGTGCAGATTGTTACAGAAAATAGCACAGATGTCATGCTGTATCGTATTGCTCTTGCAGTTATACAGGTCATGCTTGATTTTCAAGCAGCTGAGAGGCAAAGACTTGAGGAACCAGCTTCTGATGTTGGCTTGGAATCTCTGTGTGCATTGATTAACAACAACCTGCGTTGCTACGAACTTTCATCAGAGCTAAGTAGCAGTACATTGGAAGCGCTTCCACAAAACTATGCTGAGCAGGTTAATTTTGAAGATACCTGCAAAGGATTTCTTGAGGTTGCCAAGGAGGCAGTCCTTCAAACTGTCAGCGTTATTTTTGAAGACCCAGGTGTACAGGATCTACTAGTGAAAGTTTACCAAAAAGATTGGATGGAAGGAATGGTTACAGAATATCTTGTCGCAACATTTGCTGATTATTTTGGGGATGTCAAACAATATATTGAAGAAAGATCATTTCGAAGATTTGTGGAGGCTTGCCTGGAGCAAACAATTGTGGTATACGTTGATCATCTCCTTACTCAGAAAGGCCATATAAAAGAAGAAACAATCGAAAGGATGAGGCTTGATGAAGAAGTGCTTATGGATTTTTTCAGAGAACACATTAATGTGACAAAAGTTGAAACCAGAGTGCGGATTCTGGCTGATCTAAGGGAGCTTGCTTCAGCTGAGAGTCTGGATAGTTTTACTCTCATTTATACAAATATTCTGGAACATCAACCAGATTGCCCGCCTGAGGTTGTTGAGAAGCTTGTGGGAATGAGGGAAGGCATTCCAAGGAAGGAAGCCAAAGAGGTTGTACAAGAGTGCAAGGAAATATACGAGAACTCTCTTGTAGACGGGAACCCTCAAAAGTCTGGTTTTGTGTTTGGCAAATTGAAGTGCCTAACAGCACGGAAAGGCATATGGAGCAAGCTTGGACAGTAAATGATGCCGCGACTTTCGAGTAGAGTGAATTCACGCCCTAAGAGAATTGTTTCATGTTCATGTGATAATTCTTTTGTTCATTTGTTAAGCTTATGGTATTGTCACCATGCCCTTGTGTGATTTTTTGCACGGGAAGAGCTTAGGGTGTATATTCTCGTTGGTAGTAACAGATGATTTAAGTGTATAGATCTAATCTTTTTGAAATTCTATTTTTATCTATTCCATAAAGTGGTTGGAGCGAGCAAAAAA]

[+] EMBL AK119455             [CGCCATCTTCACGATCTCCGTCTCCCATCCCCGCCTCGCCGCGCCGCGCCCTCCTCCTCCTCCTCCTCCCACCCCGCCGAGCACTCACCCGCCGCCTCGGTTTCGTGCGCCTCTGCAGCGGCAGGCCGGGGGCGCGGGGCAGCGGTTGGCGTCGGCCGCGGCCGTGCTGTCATGGAGGATCTGGGCATCGAGGCGAAGGAGGCGGCCGTGCGCGAGGTGGCGAAGCTGCTCCCGCTCCCGGAGCTCCTCTCCTCCATTGCCTCCATCAAATCCGACTACCTCGCGCGGCAGCAGACAAATGATGCACAGCTCAGTACAATGGTAGCAGAGCAGGTATTCCTTGACATCTACTATGAACTGCCAAACTTATTAGTTTTAATGCTATTGTTAATGCTTTGCTCGAGTTACGGTTTCTGCTACTATCATTTGCATTCCCCCCTCAATGTTTGTCTGTTGGATTATAGTTTTTCTGTATGTGCATATTTTATCACTTATAGGTTGAGCAAGCCCATGCTGGCATCAATGCTCTTGCACTATCTCAGGAAACAATAAACAAACTACGCGAGAACTTCATAGATATAGACAAGTTGTGCCAGGAGTGTCAAACATTAATTGAGAACCACGACAAGATTAAGCTTCTTAGCAACGCAAGAAATAACCTGAACACAACTTTAAAGGATGTGGGAGGTATGATGTCTATTTCTGTTGAAGCAGCTGCAGCACGCGACTCGCTAAGTGATGATAAAGAGTTAATTCGCACTTATGAGAGATTAACAGCTCTTGATGGAAAGAGACGTTTTGCTTTAGCTGCTGCTGCATCTCACAAGGAAGAAGTTGGTCGATTGAGAGAGTACTTTGAAGATGTTGATCGTTCATGGGAAACATTTGAGAAAGCATTGTGGGGCCATGTCACTAACTTTTTCAGACTTTCAAAAGATAGCCCTCAGACGTTAGTTCGAGCAATAAGGGTTGTTGAAATGCAAGAGATCCTAGATCAACAAGTTGCAGAAGAAGCAGCTGAGGCTGAGGGTGCAGGTGCTATGGCGACAATAGCAAACCAGCGTAGAACTGCAAACAGGAAAGGTGGAGGAGCAACATCTACCCCAAGAAGCACTCAAGATAAATCAAAGGTCCAGGGAAAGGGCTACAAGGACAAATGCTATGAGTATATCAGGAAGGCTGTTGAGGCTCGCTTCGACAAACTGCTCACCGAGCTTGTTTTCTCAGAAGATTTGATGGAAGCTTTGGAGGAAGCTAAGGCAATTGGAGATGAGCTTGGTGATATCTATGACTATGTTGCACCATGTTTTCCTCCTAGATATGAAATTTTCCAGCTCATGGTAAACCTGTATACTGAAAGGTTCATCCAGATGCTAAGACTTCTCAGTGATAGAGCAAATGATATTCCAAATATAAATATTCTTAAGGTAACAGGTTGGGTTGTGAAATACCAAGAAAATCTTATCGGTCTTGGTGTGGACGAGTCTCTTGCCCAAGTTTGTTCAGAAAGTGGTGCATTGGATCCCCTCATGAATATGTATGTCGAACGTATGCAAGCAACAACTAAGAAATGGTACAGTAACATTTTGGAGGCTGACAAAACACAACCACCAAAAAGTACAGAGGATGGGAAACTATATACACCTGCAGCTGTGGATTTGTTCAGAATATTGACTGAGCAAGTGCAGATTGTTACAGAAAATAGCACAGATGTCATGCTGTATCGTATTGCTCTTGCAGTTATACAGGTCATGCTTGATTTTCAAGCAGCTGAGAGGCAAAGACTTGAGGAACCAGCTTCTGATGTTGGCTTGGAATCTCTGTGTGCATTGATTAACAACAACCTGCGTTGCTACGAACTTTCATCAGAGCTAAGTAGCAGTACATTGGAAGCGCTTCCACAAAACTATGCTGAGCAGGTTAATTTTGAAGATACCTGCAAAGGATTTCTTGAGGTTGCCAAGGAGGCAGTCCTTCAAACTGTCAGCGTTATTTTTGAAGACCCAGGTGTACAGGATCTACTAGTGAAAGTTTACCAAAAAGATTGGATGGAAGGAATGGTTACAGAATATCTTGTCGCAACATTTGCTGATTATTTTGGGGATGTCAAACAATATATTGAAGAAAGATCATTTCGAAGATTTGTGGAGGCTTGCCTGGAGCAAACAATTGTGGTATACGTTGATCATCTCCTTACTCAGAAAGGCCATATAAAAGAAGAAACAATCGAAAGGATGAGGCTTGATGAAGAAGTGCTTATGGATTTTTTCAGAGAACACATTAATGTGACAAAAGTTGAAACCAGAGTGCGGATTCTGGCTGATCTAAGGGAGCTTGCTTCAGCTGAGAGTCTGGATAGTTTTACTCTCATTTATACAAATATTCTGGAACATCAACCAGATTGCCCGCCTGAGGTTGTTGAGAAGCTTGTGGGAATGAGGGAAGGCATTCCAAGGAAGGAAGCCAAAGAGGTTGTACAAGAGTGCAAGGAAATATACGAGAACTCTCTTGTAGACGGGAACCCTCAAAAGTCTGGTTTTGTGTTTGGCAAATTGAAGTGCCTAACAGCACGGAAAGGCATATGGAGCAAGCTTGGACAGTAAATGATGCCGCGACTTTCGAGTAGAGTGAATTCACGCCCTAAGAGAATTGTTTCATGTTCATGTGATAATTCTTTTGTTCATTTGTTAAGCTTATGGTATTGTCACCATGCCCTTGTGTGATTTTTTGCACGGGAAGAGCTTAGGGTGTATATTCTCGTTGGTAGTAACAGATGATTTAAGTGTATAGATCTAATCTTTTTGAAATTCTATTTTTATCTATTCCATAAAGT                   ]
[+] EMBL CB662814             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ACAAGGAAGAAGTTGGTCGATTGAGAGAGTACTTTGAAGATGTTGATCGTTCATGGGAAACATTTGAGAAAGCATTGTGGGGCCATGTCACTAACTTTTTCAGACTTTCAAAAGATAGCCCTCAGACGTTAGTTCGAGCAATAAGGGTTGTTGAAATGCAAGAGATCCTAGATCAACAAGTTGCAGAAGAAGCAGCTGAGGCTGAGGGTGCAGGTGCTATGGCGACAATAGCAAACCAGCGTATAACTGCAAACAGGAAAGGTGGAGGAGCAACATCTACCCCAAGAAGCACTCAAGATAAATCAAAGGTCCAGGGAAAGGGCTACAAGGACAAATGCTATGAGTATATCAGGAAGGCTGTTGAGGCTCGCTTCGACAAACTGCTCACCGAGCTTGTTTTCTCAGAAGATTTGATGGAAGCTTTGGAGGAAGCTAAGGCAATTGGAGATGAGCTTGGTGATATCTATGACTATGTTGCACCATGTTTTCCTCCTAGATATGAAATTTTCCAGCTCATGGTAAACCTGTATACTGAAAGGTTCATCCAGATGCTAAGACTTCTCAGTGATAGAGCAAATGATATTCCAAATATAAATATTCTTAAGGTAACAGGTTGGGTTGTGAAATACCAAGAAAATCTTATCGGTCTTGGTGTGGACGAGTCTCTTGCCCAAGTTTGTTCAGAAAGTGGTGCATTGGATCCCCTCATGAATATGTATGTCGAACGTATGCAAGCAACAACTAAGAAATGGTACAGTAACATTTTGGAGGCTGACAAAACACAACCACCAAAAAGTACAGAGGATGGGAAACTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CA764314             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CACAGATGTCATGCTGTATCGTATTGCTCTTGCAGTTATACAGGTCATGCTTGATTTTCAAGCAGCTGAGAGGCAAAGACTTGAGGAACCAGCTTCTGATGTTGGTTTGGAATCTCTATGTGCATTGATTAACAACAACCTGCGTTGCTACGAACTTTCATCAGAGCTAAGTAGCAGTACATTGGAAGCGCTTCCACAAAACTATGCTGAGCAGGTTAATTTTGAAGATACCTGCAAAGGATTTCTTGAGGTTGCCAAGGAGGCAGTCCTTCAAACTGTCAGCGTTATTTTTGAAGACCCAGGTGTACAGGATCTACTAGTGAAAGTTTACCAAAAAGATTGGATGGAAGGAATGGTTACAGAATATCTTGTCGCAACATTTGCTGATTATTTTGGGGATGTCAAACAATATATTGAAGAAAGATCATTTCGAAGATTTGTGGAGGCTTGCCTGGAGCAAACAATTGTGGTATACGTTGATCATCTCCTTACTCAGAAAGGCCATATAAAAGAAGAAACAATCGAAAGGATGAGGCTTGATGAAGAAGTGCTTATGGATTTTTTCAGAGAACACATTAATGTGACAAAAGNTGAAACCAGAGTGCGGATTCTGGCTGATCTAANGGAGCTTGCTTCAGCTGAGAGTCTGGATAGNTTTACTCTCATTTATACAAATATTCTGGAACATCAACCAGATTGNCCGCCTGAGGTTGNTGANAAGCTTG GGGAATGAGGGAAGGCATTCC AGGAAGG AGNCCAAGAGGNTGT CCAGAGNGCANGG AATATACGAGAACTCTNTTGTANACGGGAACCCTCAAAAGTCGGGTTTTG GGTTGGCAAA TGNAANGCCTAACAGCNCGGAAAGGC TATGGAGC                                                                                                                                                                                                                                                                        ]
[+] EMBL AU069794             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AATTGAAGTGCCTAACAGCACGGAAAGGCATATGGAGCAAGCTTGGACAGTAAATNATGCTGCGACTTTCGAGTAGAGTGAATTCACGCCCTAAGAGAATTGTTTCATGTTCATGTGATAATTCTTTTGTTCATTTGTTAAGCTTATGGTATTGTCACCATGCCCTTGTGTGATTTTTTGCACGGGAAGAGCTTAGGGTGTATATTCTCGTTGGTAGTAACAGATGATTTAAGTGTATAGATCTAATCTTTTTGAAATTCTATTTTTATCTATTCCATAAAGTGGTTGGAGCGAGCAAAAAA]


>consensus_9002#0 CGCCATCTTCACGATCTCCGTCTCCCATCCCCGCCTCGCCGCGCCGCGCCCTCCTCCTCC TCCTCCTCCCACCCCGCCGAGCACTCACCCGCCGCCTCGGTTTCGTGCGCCTCTGCAGCG GCAGGCCGGGGGCGCGGGGCAGCGGTTGGCGTCGGCCGCGGCCGTGCTGTCATGGAGGAT CTGGGCATCGAGGCGAAGGAGGCGGCCGTGCGCGAGGTGGCGAAGCTGCTCCCGCTCCCG GAGCTCCTCTCCTCCATTGCCTCCATCAAATCCGACTACCTCGCGCGGCAGCAGACAAAT GATGCACAGCTCAGTACAATGGTAGCAGAGCAGGTATTCCTTGACATCTACTATGAACTG CCAAACTTATTAGTTTTAATGCTATTGTTAATGCTTTGCTCGAGTTACGGTTTCTGCTAC TATCATTTGCATTCCCCCCTCAATGTTTGTCTGTTGGATTATAGTTTTTCTGTATGTGCA TATTTTATCACTTATAGGTTGAGCAAGCCCATGCTGGCATCAATGCTCTTGCACTATCTC AGGAAACAATAAACAAACTACGCGAGAACTTCATAGATATAGACAAGTTGTGCCAGGAGT GTCAAACATTAATTGAGAACCACGACAAGATTAAGCTTCTTAGCAACGCAAGAAATAACC TGAACACAACTTTAAAGGATGTGGGAGGTATGATGTCTATTTCTGTTGAAGCAGCTGCAG CACGCGACTCGCTAAGTGATGATAAAGAGTTAATTCGCACTTATGAGAGATTAACAGCTC TTGATGGAAAGAGACGTTTTGCTTTAGCTGCTGCTGCATCTCACAAGGAAGAAGTTGGTC GATTGAGAGAGTACTTTGAAGATGTTGATCGTTCATGGGAAACATTTGAGAAAGCATTGT GGGGCCATGTCACTAACTTTTTCAGACTTTCAAAAGATAGCCCTCAGACGTTAGTTCGAG CAATAAGGGTTGTTGAAATGCAAGAGATCCTAGATCAACAAGTTGCAGAAGAAGCAGCTG AGGCTGAGGGTGCAGGTGCTATGGCGACAATAGCAAACCAGCGTAGAACTGCAAACAGGA AAGGTGGAGGAGCAACATCTACCCCAAGAAGCACTCAAGATAAATCAAAGGTCCAGGGAA AGGGCTACAAGGACAAATGCTATGAGTATATCAGGAAGGCTGTTGAGGCTCGCTTCGACA AACTGCTCACCGAGCTTGTTTTCTCAGAAGATTTGATGGAAGCTTTGGAGGAAGCTAAGG CAATTGGAGATGAGCTTGGTGATATCTATGACTATGTTGCACCATGTTTTCCTCCTAGAT ATGAAATTTTCCAGCTCATGGTAAACCTGTATACTGAAAGGTTCATCCAGATGCTAAGAC TTCTCAGTGATAGAGCAAATGATATTCCAAATATAAATATTCTTAAGGTAACAGGTTGGG TTGTGAAATACCAAGAAAATCTTATCGGTCTTGGTGTGGACGAGTCTCTTGCCCAAGTTT GTTCAGAAAGTGGTGCATTGGATCCCCTCATGAATATGTATGTCGAACGTATGCAAGCAA CAACTAAGAAATGGTACAGTAACATTTTGGAGGCTGACAAAACACAACCACCAAAAAGTA CAGAGGATGGGAAACTATATACACCTGCAGCTGTGGATTTGTTCAGAATATTGACTGAGC AAGTGCAGATTGTTACAGAAAATAGCACAGATGTCATGCTGTATCGTATTGCTCTTGCAG TTATACAGGTCATGCTTGATTTTCAAGCAGCTGAGAGGCAAAGACTTGAGGAACCAGCTT CTGATGTTGGCTTGGAATCTCTGTGTGCATTGATTAACAACAACCTGCGTTGCTACGAAC TTTCATCAGAGCTAAGTAGCAGTACATTGGAAGCGCTTCCACAAAACTATGCTGAGCAGG TTAATTTTGAAGATACCTGCAAAGGATTTCTTGAGGTTGCCAAGGAGGCAGTCCTTCAAA CTGTCAGCGTTATTTTTGAAGACCCAGGTGTACAGGATCTACTAGTGAAAGTTTACCAAA AAGATTGGATGGAAGGAATGGTTACAGAATATCTTGTCGCAACATTTGCTGATTATTTTG GGGATGTCAAACAATATATTGAAGAAAGATCATTTCGAAGATTTGTGGAGGCTTGCCTGG AGCAAACAATTGTGGTATACGTTGATCATCTCCTTACTCAGAAAGGCCATATAAAAGAAG AAACAATCGAAAGGATGAGGCTTGATGAAGAAGTGCTTATGGATTTTTTCAGAGAACACA TTAATGTGACAAAAGTTGAAACCAGAGTGCGGATTCTGGCTGATCTAAGGGAGCTTGCTT CAGCTGAGAGTCTGGATAGTTTTACTCTCATTTATACAAATATTCTGGAACATCAACCAG ATTGCCCGCCTGAGGTTGTTGAGAAGCTTGTGGGAATGAGGGAAGGCATTCCAAGGAAGG AAGCCAAAGAGGTTGTACAAGAGTGCAAGGAAATATACGAGAACTCTCTTGTAGACGGGA ACCCTCAAAAGTCTGGTTTTGTGTTTGGCAAATTGAAGTGCCTAACAGCACGGAAAGGCA TATGGAGCAAGCTTGGACAGTAAATGATGCCGCGACTTTCGAGTAGAGTGAATTCACGCC CTAAGAGAATTGTTTCATGTTCATGTGATAATTCTTTTGTTCATTTGTTAAGCTTATGGT ATTGTCACCATGCCCTTGTGTGATTTTTTGCACGGGAAGAGCTTAGGGTGTATATTCTCG TTGGTAGTAACAGATGATTTAAGTGTATAGATCTAATCTTTTTGAAATTCTATTTTTATC TATTCCATAAAGTGGTTGGAGCGAGCAAAAAA



consensusID : consensus_9002#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 575
fasta sequence
                              [AAACACCACGCCATCTTCACGATCTCCGTCTCCCATCCCCGCCTCGCCGCGCCGCGCCCTCCTCCTCCTCCTCCTCCCACCCCGCCGAGCACTCACCCGCCGCCTCGGTTTCGTGCGCCTCTGCAGCGGCAGGCCGGGGGCGCGGGGCAGCGGTTGGCGTCGGCCGCGGCCGTGCTGTCATGGAGGATCTGGGCATCGAGGCGAAGGAGGCGGCCGTGCGCGAGGTGGCGAAGCTGCTCCCGCTCCCGGAGCTCCTCTCCTCCATTGCCTCCATCAAATCCGACTACCTCGCGCGGCAGCAGACAAATGATGCACAGCTCAGTACAATGGTAGCAGAGCAGGTTGAGCAAGCCCATGCTGGCATCAATGCTCTTGCACTATCTCAGGAAACAATAAACAAACTACGCGAGAACTTCATAGATATAGACAAGTTGTGCCAGGAGTGTCAAACATTAATTGAGAACCACGACAAGATTAAGCTTCTTAGCAACGCAAGAAATAACCTGAACACAACTTTAAAGGATGTGGGAGGTATGATGTCTATTTCTGTTGAAGCAGCTGCAGCACGCGACTCG]

[+] EMBL CB640856             [AAACACCACGCCATCTTCACGATCTCCGTCTCCCATCCCCGCCTCGCCGCGCCGCGCCCTCCTCCTCCTCCTCCTCCCACCCCGCCGAGCACTCACCCGCCGCCTCGGTTTCGTGCGCCTCTGCAGCGGCAGGCCGGGGGCGCGGGGCAGCGGTTGGCGTCGGCCGCGGCCGTGCTGTCATGGAGGATCTGGGCATCGAGGCGAAGGAGGCGGCCGTGCGCGAGGTGGCGAAGCTGCTCCCGCTCCCGGAGCTCCTCTCCTCCATTGCCTCCATCAAATCCGACTACCTCGCGCGGCAGCAGACAAATGATGCACAGCTCAGTACAATGGTAGCAGAGCAGGTTGAGCAAGCCCATGCTGGCATCAATGCTCTTGCACTATCTCAGGAAACAATAAACAAACTACGCGAGAACTTCATAGATATAGACAAGTTGTGCCAGGAGTGTCAAACATTAATTGAGAACCACGACAAGATTAAGCTTCTTAGCAACGCAAGAAATAACCTGAACACAACTTTAAAGGATGTGGGAGGTATGATGTCTATTTCTGTTGAAGCAGCTGCAGCACGCGACTCG]
[+] EMBL CB640837             [ AACACCACGCCATCTTCACGATCTCCGTCTCCCATCCCCGCCTCGCCGCGCCGCGCCCTCCTCCTCCTCCTCCTCCCACCCCGCCGAGCACTCACCCGCCGCCTCGGTTTCGTGCGCCTCTGCAGCGGCAGGCCGGGGGCGCGGGGCAGCGGTTGGCGTCGGCCGCGGCCGTGCTGTCATGGAGGATCTGGGCATCGAGGCGAAGGAGGCGGCCGTGCGCGAGGTGGCGAAGCTGCTCCCGCTCCCGGAGCTCCTCTCCTCCATTGCCTCCATCAAATCCGACTACCTCGCGCGGCAGCAGACAAATGATGCACAGCTCAGTACAATGGTAGCAGAGCAAGTTGAGCAAGCCCATGCTGGCAT                                                                                                                                                                                                                   ]


>consensus_9002#1 AAACACCACGCCATCTTCACGATCTCCGTCTCCCATCCCCGCCTCGCCGCGCCGCGCCCT CCTCCTCCTCCTCCTCCCACCCCGCCGAGCACTCACCCGCCGCCTCGGTTTCGTGCGCCT CTGCAGCGGCAGGCCGGGGGCGCGGGGCAGCGGTTGGCGTCGGCCGCGGCCGTGCTGTCA TGGAGGATCTGGGCATCGAGGCGAAGGAGGCGGCCGTGCGCGAGGTGGCGAAGCTGCTCC CGCTCCCGGAGCTCCTCTCCTCCATTGCCTCCATCAAATCCGACTACCTCGCGCGGCAGC AGACAAATGATGCACAGCTCAGTACAATGGTAGCAGAGCAGGTTGAGCAAGCCCATGCTG GCATCAATGCTCTTGCACTATCTCAGGAAACAATAAACAAACTACGCGAGAACTTCATAG ATATAGACAAGTTGTGCCAGGAGTGTCAAACATTAATTGAGAACCACGACAAGATTAAGC TTCTTAGCAACGCAAGAAATAACCTGAACACAACTTTAAAGGATGTGGGAGGTATGATGT CTATTTCTGTTGAAGCAGCTGCAGCACGCGACTCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9002#0      --------CGCCATCTTCACGATCTCCGTCTCCCATCCCCGCCTCGCCGCGCCGCGCCCT 52
consensus_9002#1      AAACACCACGCCATCTTCACGATCTCCGTCTCCCATCCCCGCCTCGCCGCGCCGCGCCCT 60
                              ****************************************************

consensus_9002#0      CCTCCTCCTCCTCCTCCCACCCCGCCGAGCACTCACCCGCCGCCTCGGTTTCGTGCGCCT 112
consensus_9002#1      CCTCCTCCTCCTCCTCCCACCCCGCCGAGCACTCACCCGCCGCCTCGGTTTCGTGCGCCT 120
                      ************************************************************

consensus_9002#0      CTGCAGCGGCAGGCCGGGGGCGCGGGGCAGCGGTTGGCGTCGGCCGCGGCCGTGCTGTCA 172
consensus_9002#1      CTGCAGCGGCAGGCCGGGGGCGCGGGGCAGCGGTTGGCGTCGGCCGCGGCCGTGCTGTCA 180
                      ************************************************************

consensus_9002#0      TGGAGGATCTGGGCATCGAGGCGAAGGAGGCGGCCGTGCGCGAGGTGGCGAAGCTGCTCC 232
consensus_9002#1      TGGAGGATCTGGGCATCGAGGCGAAGGAGGCGGCCGTGCGCGAGGTGGCGAAGCTGCTCC 240
                      ************************************************************

consensus_9002#0      CGCTCCCGGAGCTCCTCTCCTCCATTGCCTCCATCAAATCCGACTACCTCGCGCGGCAGC 292
consensus_9002#1      CGCTCCCGGAGCTCCTCTCCTCCATTGCCTCCATCAAATCCGACTACCTCGCGCGGCAGC 300
                      ************************************************************

consensus_9002#0      AGACAAATGATGCACAGCTCAGTACAATGGTAGCAGAGCAGGTATTCCTTGACATCTACT 352
consensus_9002#1      AGACAAATGATGCACAGCTCAGTACAATGGTAGCAGAGCAGGT----------------- 343
                      *******************************************                 

consensus_9002#0      ATGAACTGCCAAACTTATTAGTTTTAATGCTATTGTTAATGCTTTGCTCGAGTTACGGTT 412
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      TCTGCTACTATCATTTGCATTCCCCCCTCAATGTTTGTCTGTTGGATTATAGTTTTTCTG 472
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      TATGTGCATATTTTATCACTTATAGGTTGAGCAAGCCCATGCTGGCATCAATGCTCTTGC 532
consensus_9002#1      ---------------------------TGAGCAAGCCCATGCTGGCATCAATGCTCTTGC 376
                                                 *********************************

consensus_9002#0      ACTATCTCAGGAAACAATAAACAAACTACGCGAGAACTTCATAGATATAGACAAGTTGTG 592
consensus_9002#1      ACTATCTCAGGAAACAATAAACAAACTACGCGAGAACTTCATAGATATAGACAAGTTGTG 436
                      ************************************************************

consensus_9002#0      CCAGGAGTGTCAAACATTAATTGAGAACCACGACAAGATTAAGCTTCTTAGCAACGCAAG 652
consensus_9002#1      CCAGGAGTGTCAAACATTAATTGAGAACCACGACAAGATTAAGCTTCTTAGCAACGCAAG 496
                      ************************************************************

consensus_9002#0      AAATAACCTGAACACAACTTTAAAGGATGTGGGAGGTATGATGTCTATTTCTGTTGAAGC 712
consensus_9002#1      AAATAACCTGAACACAACTTTAAAGGATGTGGGAGGTATGATGTCTATTTCTGTTGAAGC 556
                      ************************************************************

consensus_9002#0      AGCTGCAGCACGCGACTCGCTAAGTGATGATAAAGAGTTAATTCGCACTTATGAGAGATT 772
consensus_9002#1      AGCTGCAGCACGCGACTCG----------------------------------------- 575
                      *******************                                         

consensus_9002#0      AACAGCTCTTGATGGAAAGAGACGTTTTGCTTTAGCTGCTGCTGCATCTCACAAGGAAGA 832
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      AGTTGGTCGATTGAGAGAGTACTTTGAAGATGTTGATCGTTCATGGGAAACATTTGAGAA 892
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      AGCATTGTGGGGCCATGTCACTAACTTTTTCAGACTTTCAAAAGATAGCCCTCAGACGTT 952
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      AGTTCGAGCAATAAGGGTTGTTGAAATGCAAGAGATCCTAGATCAACAAGTTGCAGAAGA 1012
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      AGCAGCTGAGGCTGAGGGTGCAGGTGCTATGGCGACAATAGCAAACCAGCGTAGAACTGC 1072
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      AAACAGGAAAGGTGGAGGAGCAACATCTACCCCAAGAAGCACTCAAGATAAATCAAAGGT 1132
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      CCAGGGAAAGGGCTACAAGGACAAATGCTATGAGTATATCAGGAAGGCTGTTGAGGCTCG 1192
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      CTTCGACAAACTGCTCACCGAGCTTGTTTTCTCAGAAGATTTGATGGAAGCTTTGGAGGA 1252
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      AGCTAAGGCAATTGGAGATGAGCTTGGTGATATCTATGACTATGTTGCACCATGTTTTCC 1312
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      TCCTAGATATGAAATTTTCCAGCTCATGGTAAACCTGTATACTGAAAGGTTCATCCAGAT 1372
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      GCTAAGACTTCTCAGTGATAGAGCAAATGATATTCCAAATATAAATATTCTTAAGGTAAC 1432
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      AGGTTGGGTTGTGAAATACCAAGAAAATCTTATCGGTCTTGGTGTGGACGAGTCTCTTGC 1492
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      CCAAGTTTGTTCAGAAAGTGGTGCATTGGATCCCCTCATGAATATGTATGTCGAACGTAT 1552
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      GCAAGCAACAACTAAGAAATGGTACAGTAACATTTTGGAGGCTGACAAAACACAACCACC 1612
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      AAAAAGTACAGAGGATGGGAAACTATATACACCTGCAGCTGTGGATTTGTTCAGAATATT 1672
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      GACTGAGCAAGTGCAGATTGTTACAGAAAATAGCACAGATGTCATGCTGTATCGTATTGC 1732
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      TCTTGCAGTTATACAGGTCATGCTTGATTTTCAAGCAGCTGAGAGGCAAAGACTTGAGGA 1792
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      ACCAGCTTCTGATGTTGGCTTGGAATCTCTGTGTGCATTGATTAACAACAACCTGCGTTG 1852
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      CTACGAACTTTCATCAGAGCTAAGTAGCAGTACATTGGAAGCGCTTCCACAAAACTATGC 1912
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      TGAGCAGGTTAATTTTGAAGATACCTGCAAAGGATTTCTTGAGGTTGCCAAGGAGGCAGT 1972
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      CCTTCAAACTGTCAGCGTTATTTTTGAAGACCCAGGTGTACAGGATCTACTAGTGAAAGT 2032
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      TTACCAAAAAGATTGGATGGAAGGAATGGTTACAGAATATCTTGTCGCAACATTTGCTGA 2092
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      TTATTTTGGGGATGTCAAACAATATATTGAAGAAAGATCATTTCGAAGATTTGTGGAGGC 2152
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      TTGCCTGGAGCAAACAATTGTGGTATACGTTGATCATCTCCTTACTCAGAAAGGCCATAT 2212
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      AAAAGAAGAAACAATCGAAAGGATGAGGCTTGATGAAGAAGTGCTTATGGATTTTTTCAG 2272
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      AGAACACATTAATGTGACAAAAGTTGAAACCAGAGTGCGGATTCTGGCTGATCTAAGGGA 2332
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      GCTTGCTTCAGCTGAGAGTCTGGATAGTTTTACTCTCATTTATACAAATATTCTGGAACA 2392
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      TCAACCAGATTGCCCGCCTGAGGTTGTTGAGAAGCTTGTGGGAATGAGGGAAGGCATTCC 2452
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      AAGGAAGGAAGCCAAAGAGGTTGTACAAGAGTGCAAGGAAATATACGAGAACTCTCTTGT 2512
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      AGACGGGAACCCTCAAAAGTCTGGTTTTGTGTTTGGCAAATTGAAGTGCCTAACAGCACG 2572
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      GAAAGGCATATGGAGCAAGCTTGGACAGTAAATGATGCCGCGACTTTCGAGTAGAGTGAA 2632
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      TTCACGCCCTAAGAGAATTGTTTCATGTTCATGTGATAATTCTTTTGTTCATTTGTTAAG 2692
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      CTTATGGTATTGTCACCATGCCCTTGTGTGATTTTTTGCACGGGAAGAGCTTAGGGTGTA 2752
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      TATTCTCGTTGGTAGTAACAGATGATTTAAGTGTATAGATCTAATCTTTTTGAAATTCTA 2812
consensus_9002#1      ------------------------------------------------------------
                                                                                  

consensus_9002#0      TTTTTATCTATTCCATAAAGTGGTTGGAGCGAGCAAAAAA 2852
consensus_9002#1      ----------------------------------------
                                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)