These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9200#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1833 fasta sequence [TCGCCCGCCCATGCCGCTGCTCCTGCGCGGCGGCTCCCTCTTCCGTCTATACGGGTGTGGCTGTGGGCTTCCAAGCGCAAATTTCAGTCCCAGCAAACTAGCACTGATAAGACTAAGCTTGATGATGGCAGAAACACGAGCCACCTATTCGCGTCGAGCTGCCTCTAAGAATACTGATATCAAGAAAGATGATGAACATGTCCTTGAAAAGGAGGATGTTGCTGAAAGCAAATTGGAGATAGAGCAACTTAGGAATGACCCCGATCGACTCCAATCCATGACAGTGAAGGAGCTCAGGGAAATCACGAGGATGATGGGAATTCCTGTAAAAGGCAACAAGAAAGATTTGGTATCAGCCCTGATGGATTCTCTGGGTAAAGTGGGAACTTCATCAGTTGAGAAGATTGGTGTGTCTGAAGTACCTTCAAAAAGAAAAGGTGCTTCAGTAGTAGTTGAACAAAACATAGATAGTTCTGAGGTCATTTCTGAAACTCCTAGTAAGAGAAGTAGAGCAAAGAACAAAGGAACCGCTGAGGAGAGTTCTGGGGCTAATGTCAAGCAAAGCAAGACATCAGTCCAGAAGAAAAAGCTAGTTGTCCAAGGTGCCAGTGTGGACCATGAAGAACCTTGGACTGTACTTGTACACAAGAAACCACAACCTGCCTGGATTCCTTATAATCCTAAGGTCATGAGGTCTCCATCTCTTAGCAAGGATACGAAGGCTCTAAAGATTCTGTCATGGAATGTGAATGGATTAAAAGCTTTACTTAAATCGAGGGGCTTCTCTATTCATCAGTTAGCTCAGAGGGAGGACTTCGATATACTATGCCTACAAGAGACAAAAATGCAGGAGAAGGATGTAGAAGTCATTAAGGAAGGTCTACTTGAAGGCTATACCCATAGTTTCTGGACATGCAGTGTATCAAAGCTTGGCTATTCGGGGACTGCAATAATTTCAAGGGTGAAACCACTCTCTATCAAGTACGGGCTTGGTGTGCCAGACCATGATACTGAAGGGAGGGTCGTCACAGTGGAGTTCAATGATTTTTACCTCCTGACTGCTTATGTACCAAATTCTGGTGATGGTCTAAAAAGATTGACTTACAGGGTCACAGAATGGGATCCAAGCCTTGGTAACTACATGAAAGACTTGGAAAAATCGAAGCCTGTTATACTAACTGGTGATCTTAACTGTGCCCATCAAGAGATTGATATACATGATCCTGCTGGAAATCGTAGAAGTGCAGGCTTTACAATTGAAGAAAGGGAATCATTCGAGACTAATTTTTTGTCCAAAGGTTTTGTTGATACATTTCGAAAACAGCATCCCAATGTTGTTGGATATAGTTACTGGGGTTATAGGCATAATGCCCGGAAGACCAACAAAGGTTGGCGTCTGGATTATTTTCTTGTGTCTGAATCCATTGCAGAAAGAGTCCATGATTCATACATTATTCCAGACATATCTGCCAGTGATCACAGCCCGCTAGGCCTCGTACTGAAGCTCTAGGCAGGCTGCATGCCTGGAACCCAATACGGACTTCTGGGTTTAGTTAACAATGTTTTCCTGCTGTGAGTCTGTGGGAGGGTATGTGGTTTTGTATCAGTAGGTTCTAATACTAGCCTAACGGATGTGGATGTGTTACACCAATCCGATGTTGGAAAAAAGGCTGGTTTCGATATGTAGCCGAATGAGTCTGGGTGATGTAGTGTTGTTACACTTCCTTAAGCTGCATTGACAGATCGTAATGCGGGGTCTGCACTTTTCACGTTTTCAGTGGAGTAGCTCAGTATTGGAATTCG-ATGGTAATATCATGATTCGTAGTCAAAAAA] [+] EMBL AK101426 [TCGCCCGCCCATGCCGCTGCTCCTGCGCGGCGGCTCCCTCTTCCGTCTATACGGGTGTGGCTGTGGGCTTCCAAGCGCAAATTTCAGTCCCAGCAAACTAGCACTGATAAGACTAAGCTTGATGATGGCAGAAACACGAGCCACCTATTCGCGTCGAGCTGCCTCTAAGAATACTGATATCAAGAAAGATGATGAACATGTCCTTGAAAAGGAGGATGTTGCTGAAAGCAAATTGGAGATAGAGCAACTTAGGAATGACCCCGATCGACTCCAATCCATGACAGTGAAGGAGCTCAGGGAAATCACGAGGATGATGGGAATTCCTGTAAAAGGCAACAAGAAAGATTTGGTATCAGCCCTGATGGATTCTCTGGGTAAAGTGGGAACTTCATCAGTTGAGAAGATTGGTGTGTCTGAAGTACCTTCAAAAAGAAAAGGTGCTTCAGTAGTAGTTGAACAAAACATAGATAGTTCTGAGGTCATTTCTGAAACTCCTAGTAAGAGAAGTAGAGCAAAGAACAAAGGAACCGCTGAGGAGAGTTCTGGGGCTAATGTCAAGCAAAGCAAGACATCAGTCCAGAAGAAAAAGCTAGTTGTCCAAGGTGCCAGTGTGGACCATGAAGAACCTTGGACTGTACTTGTACACAAGAAACCACAACCTGCCTGGATTCCTTATAATCCTAAGGTCATGAGGTCTCCATCTCTTAGCAAGGATACGAAGGCTCTAAAGATTCTGTCATGGAATGTGAATGGATTAAAAGCTTTACTTAAATCGAGGGGCTTCTCTATTCATCAGTTAGCTCAGAGGGAGGACTTCGATATACTATGCCTACAAGAGACAAAAATGCAGGAGAAGGATGTAGAAGTCATTAAGGAAGGTCTACTTGAAGGCTATACCCATAGTTTCTGGACATGCAGTGTATCAAAGCTTGGCTATTCGGGGACTGCAATAATTTCAAGGGTGAAACCACTCTCTATCAAGTACGGGCTTGGTGTGCCAGACCATGATACTGAAGGGAGGGTCGTCACAGTGGAGTTCAATGATTTTTACCTCCTGACTGCTTATGTACCAAATTCTGGTGATGGTCTAAAAAGATTGACTTACAGGGTCACAGAATGGGATCCAAGCCTTGGTAACTACATGAAAGACTTGGAAAAATCGAAGCCTGTTATACTAACTGGTGATCTTAACTGTGCCCATCAAGAGATTGATATACATGATCCTGCTGGAAATCGTAGAAGTGCAGGCTTTACAATTGAAGAAAGGGAATCATTCGAGACTAATTTTTTGTCCAAAGGTTTTGTTGATACATTTCGAAAACAGCATCCCAATGTTGTTGGATATAGTTACTGGGGTTATAGGCATAATGCCCGGAAGACCAACAAAGGTTGGCGTCTGGATTATTTTCTTGTGTCTGAATCCATTGCAGAAAGAGTCCATGATTCATACATTATTCCAGACATATCTGCCAGTGATCACAGCCCGCTAGGCCTCGTACTGAAGCTCTAGGCAGGCTGCATGCCTGGAACCCAATACGGACTTCTGGGTTTAGTTAACAATGTTTTCCTGCTGTGAGTCTGTGGGAGGGTATGTGGTTTTGTATCAGTAGGTTCTAATACTAGCCTAACGGATGTGGATGTGTTACACCAATCCGATGTTGGAAAAAAGGCTGGTTTCGATATGTAGCCGAATGAGTCTGGGTGATGTAGTGTTGTTACACTTCCTTAAGCTGCATTGACAGATCGTAATGCGGGGTCTGCACTTTTCACGTTTTCAGTGGAGTAGCTCAGTATTGGAATTCG ATGGTAATATCATG ] [+] EMBL AK064082 [ CCGCCCATGCCGCTGCTCCTGCGCGGCGGCTCCCTCTTCCGTCTCTACGGGTGTGGCTGTGGGCTTCCAAGCGCAAATTTCAGTCCCAGCAAACTAGCACTGATAAGACTAAGCTTGATGATGGCAGAAACACGAGCCACCTATTCGCGTCGAGCTGCCTCTAAGAATACTGATATCAAGAAAGATGATGAACATGTCCTTGAAAAGGAGGATGTTGCTGAAAGCAAATTGGAGATAGAGCAACTTAGGAATGACCCCGATCGACTCCAATCCATGACAGTGAAGGAGCTCAGGGAAATCACGAGGATGATGGGAATTCCTGTAAAAGGCAACAAGAAAGATTTGGTATCAGCCCTGATGGATTCTCTGGGTAAAGTGGGAACTTCATCAGTTGAGAAGATTGGTGTGTCTGAAGTACCTTCAAAAAGAAAAGGTGCTTCAGTAGTAGTTGAACAAAACATAGATAGTTCTGAGGTCATTTCTGAAACTCCTAGTAAGAGAAGTAGAGCAAAGAACAAAGGAACCGCTGAGGAGAGTTCTGGGGCTAATGTCAAGCAAAGCAAGACATCAGTCCAGAAGAAAAAGCTAGTTGTCCAAGGTGCCAGTGTGGACCATGAAGAACCTTGGACTGTACTTGTACACAAGAAACCACAACCTGCCTGGATTCCTTATAATCCTAAGGTCATGAGGTCTCCATCTCTTAGCAAGGATACGAAGGCTCTAAAGATTCTGTCATGGAATGTGAATGGATTAAAAGCTTTACTTAAATCGAGGGGCTTCTCTATTCATCAGTTAGCTCAGAGGGAGGACTTCGATATACTATGCCTACAAGAGACAAAAATGCAGGAGAAGGATGTAGAAGTCATTAAGGAAGGTCTACTTGAAGGCTATACCCATAGTTTCTGGACATGCAGTGTATCAAAGCTTGGCTATTCGGGGACTGCAATAATTTCAAGGGTGAAACCACTCTCTATCAAGTACGGGCTTGGTGTGCCAGACCATGATACTGAAGGGAGGGTCGTCACAGTGAAGTTCAATGATTTTTACCTCCTGACTGCTTATGTACCAAATTCTGGTGATGGTCTAAAAAGATTGACTTACAGGGTCACAGAATGGGATCCAAGCCTTGGTAACTACATGAAAGACTTGGAAAAATCGAAGCCTGTTATACTAACTGGTGATCTTAACTGTGCCCATCAAGAGATTGATATACATGATCCTGCTGGAAATCGTAGAAGTGCAGGCTTTACAATTGAAGAAAGGGAATCATTCGAGACTAATTTTTTGTCCAAAGGTTTTGTTGATACATTTCGAAAACAGCATCCCAATGTTGTTGGATATAGTTACTGGGGTTATAGGCATAATGCCCGGAAGACCAACAAAGGTTGGCGTCTGGATTATTTTCTTGTGTCTGAATCCATTGCAGAAAGAGTCCATGATTCATACATTATTCCAGACATATCTGCCAGTGATCACAGCCCGCTAGGCCTCGTACTGAAGCTCTAGGCAGGCTGCATGCCTGGAACCCAATACGGACTTCTGGGTTTAGTTAACAATGTTTTCCTGCTGTGAGTCTGTGGGAGGGTATGTGGTTTTGTATCAGTAGGTTCTAATACTAGCCTAACGGATGTGGATGTGTTACACCAATCCGATGTTGGAAAAAAGGCTGGTTTCGATATGTAGCCGAATGAGTCTGGGTGATGTAGTGTTGTTACACTTCCTTAAGCTGCATTGACAGATCGTAATGCGGGGTCTGCACTTTTCACGTTTTCAGTGGAGTAGCTCAGTATTGGAATTCG ATGGTAATATCATG ] [+] EMBL CF328591 [ AGGGAAATCACGAGGATGATGGGAATTCCTGTAAAAGGCAACAAGAAAGATTTGGTATCAGCCCTGATGGATTCTCTGGGTAAAGTGGGAACTTCATCAGTTGAGAAGATTGGTGTGTCTGAAGTACCTTCAAAAAGAAAAGGTGCTTCAGTAGTAGTTGAACAAAACATAGATAGTTCTGAGGTCATTTCTGAAACTCCTAGTAAGAGAAGTAGAGCAAAGAACAAAGGAACCGCTGAGGAGAGTTCTGGGGCTAATGTCAAGCAAAGCAAGACATCAGTCCAGAAGAAAAAGCTAGCTGTCCAAGGTGCCAGTGTGGACCATGAAGAACCTTGGACTGTACTTGTACACAAGAAACCACAACCTGCCTGGATTCCTTATAATCCTAAGGTCATGAGGTCTCCATCTCTTAGCAAGGATACGAAGGCTCTAAAGATTCTGTCATGGAATGTGAATGGATTAAAAGCTTTACTTAAATCGAGGGGCTTCTCTATTCATCAGTTAGCTCAGAGGGAGGACTTCGATATACTATGCCTACAAGAGACAAAAAT ] [+] EMBL CF329508 [ AGGGAAATCACGAGGATGATGGGAATTCCTGTAAAAGGCAACAAGAAAGATTTGGTATCAGCCCTGATGGATTCTCTGGGTAAAGTGGGAACTTCATCAGTTGAGAAGATTGGTGTGTCTGAAGTACCTTCAAAAAGAAAAGGTGCTTCAGTAGTAGTTGAACAAAACATAGATAGTTCTGAGGTCATTTCTGAAACTCCTAGTAAGAGAAGTAGAGCAAAGAACAAAGGAACCGCTGAGGAGAGTTCTGGGGCTAATGTCAAGCAAAGCAAGACATCAGTCCAGAAGAAAAAGCTAGTTGTCCAAGGTGCCAGTGTGGACCATGAAGAACCTTGGACTGTACTTGTACACAAGAAACCACAACCTGCCTGGATTCCTTATAATCCTAAGGTCATGAGGTCTCCATCTCTTAGCAAGGATACGAAGGCTCTAAAGATTCTGTCATGGAATGTGAATGGATTAAAAGCTTTACTTAAATCGAGGGGCTTCTCTATTCATCAGTTAGCTCAGAGGGAGGACTTCAATATACTA ] [-] EMBL CF329509 [ AGAGATTGATATACATGATCCTGCTGGAAATCGTAGAAGTGCAGGCTTTACAATTGAAGAAAGGGAATCATTCGAGACTAATTTTTTGTCCAAAGGTTTTGTTGATACATTTCGAAAACAGCATCCCAATGTTGTTGGATATAGTTACTGGGGTTATAGGCATAATGCCCGGAAGACCAACAAAGGTTGGCGTCTGGATTATTTTCTTGTGTCTGAATCCATTGCAGAAAGAGTCCATGATTCATACATTATTCCAGACATATCTGCCAGTGATCACAGCCCGCTAGGCCTCGTACTGAAGCTCTAGGCAGGCTGCATGCCTGGAACCCAATACGGACTTCTGGGTTTAGTTAACAATGTTTTCCTGCTGTGAGTCTGTGGGAGGGTATGTGGTTTTGTATCAGTAGGTTCTAATACTAGCCTAACGGATGTGGGTGTGTTACACCAATCCGATGTTGGAAAAAAGGCTGGTTTCGATATGTAGCCGAATGAGTCTGGGTGATGTAGTGTTGTTACACTTCCTTAAGCTGCATTGACAGATCGTAATGCGGGGTCTGCACTTTTCACGTTTTCAGTGGAGTAGCTCAGTATTGGAATTCGCATGGTAATATCATGATTCGTAGTCAAAAAA] [-] EMBL CF328592 [ GGAACCCAATACGGACTTCTGGGTTTAGTTAACAATGTTTTCCTGCTGTGAGTCTGTGGGAGGGTATGTGGTTTTGTATCAGTAGGTTCTAATACTAGCCTAACGGATGTGGATGTGTTACACCAATCCGATGTTGGAAAAAAGGCTGGTTTCGATATGTAGCCGAATGAGTCTGGGTGATGTAGTGTTGTTACACTTCCTTAAGCTGCATTGACAGATCGTAATGCGGGGTCTGCACTTTTCACGTTTTCAaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||