These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9216#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2518 fasta sequence [CTACCACCTTCTCGTTGATCCTCCTCCCCGTTCTTGGCTCCCCTCGCATTCGTCCTCACTTCCCTTCTTCCATGGGGGTTCGCCGCCGTGAGTGAGGAGGAGGAGGAGTAGTACTAGGAGGAGGTGAGGCCATGGAGAGGGTGGAGGATCCGGACCTGGAGGACCCGAACCCGGACGTGGGGGAGCTGTTCAGCCACTACGACGGGCTCTACTTCCGCGGCGCGCTCGCCGGCGCCGGCTTCTCCGTCCAGTGGAGCTCGCCGCCGTCGCGGATGGCCGGTTCTTTTGGATCGTGTACCTTCGGAAAACCGGATAATACCATAACATTGTCTGAAACTGTGCTGAAATATCGCTCAAGTATTGATATGAAGAATGCATTGCTGCATCAGATGATCCATGCAATCTTATTTGTAAAGCATCATAGGAAGGACTGCCGGGGTCATGGTCCTATTTTTCGTGCTTGGATGACTGCTATTAACACCTGTTCTATTGACGATCACCAGAGACCACCTGATGGGTACAATATCACCACCAGACATGATTTTTCTCCGGACAAGTCCACCCGCAGCCTAAGTGGTTTTTTGTGGAAGTGTGAATATTGTGGGAATACACTTGTGAGAGCCACAAACATCGGTGCTCCATCTGATGCCTGCTGCATTGAGAATGTTGACAACTGCTCAACCTGTGGCAACATGCTTTGCCACTGGCATAACCACAAGATGAACTGTGGTGGCACATACACAAAGATGGGCACATCAACATCGGCAGAAGTTCAAAACAATGTTCAAGGTACAAAAAGATGCCCAACTGACATGAAAATGGCCAAGTCACAAAGAACCATACGGAAACCAGAGTCACCAGATTCAGATGGATTGCAGGAGAAAGCTACTGTCATGAAACAAAAAGCAGAAGGCGAGCTTCTCGCACTTGTGGCTGGCAGCAATTTAAAATTAACAGGAAGTAACTCTTCAAAGAAGGGAGTGAAGAGGCATAGGCCTGAAGACACTCAAGACACAAATGCTATGCTTTCTACCCCTCTGAAAAACCTGAAGCTGGGCCTAGACTTGGTTTCATCTGGGAAGCACAGGGTGTCATCTATAGTTGGTAGCAATAACACAAAATCATCAAGAGGTAGTGCTTCAAGGAAGCAACGCAAACGACATTCACCTGAGAATGTTCAGAAGTCCAGTGTTCTGCCTGCTCTCTCTCAAAAGAAGCTGAAACTGAAGGAAGACCTGGTTGTATCAGGGAAGAACGAGCCTTTATCCCTAGTGAATTTCAGCAATGGAAAATCAGCAGGAAGTAACTCATCAAAAAAGGTAAGCAAGCAGCATGAACTTGAAGGAGTTCAGAAATCCTGTGTTCAGCCTGCTAGCCCTCCGAGAAAACCGAGGCAAGATCTTGTTGCATCGGTCAAAACCGAGATTTCTTGTCTAGCCAGTCGCAGCGATGCTAAAGTGTTGAGAGGCA-GCTCCTCAAAATGTGCAGGCAATCAGCATGAGCCTGCAGACATTCAGAAAAGCATCGCTCTGCCTTCTGCCTCTGAAAGTAAACTCAAGCGACAGAATGAAATTAGCTCCTCAACTAAGGCAGGGATGCAGGACAAGCCTAGAGGCACTCAGAAAACCATTGATCTGCCTGCTTCCCCTCAAACAAAACTGAAGCAATCAGTGTTGCAGAAGCAAAAGAGACAGTGCGGAACTAGGAAGTCAGCTAATGAGCAATTTGCCGTGATTAGTGCTTGGCTGAACTACTACGAGTCAGAAGGATCAAGTGGATCAACTGAGCCCCTTGTAAACAAAAGAACAGAGCGGAGAAGGATAGCGAGGAATAGGATAACTTATACACGGTCAAGGAAGCAAAATGCCAGGGGAAATGCTTCCATCAAGTCCCAACCTTCTGAAGATGACTCGTCTCAAGCAAAAGCTGCAGCTCCATGCTTGGAGATTGTTGTTAGCACCCCTTCTGAGCAGGTGGTAAATCAATCCCCCGGATGCCAGTCCCAGTCACCAGCTCCATACTTGGCGATCGTTCCTTTCGACGCTGCTCATGATATGGTTCCACTTCAGTCAGCAGATCCACCCGGTTTAACTGATGATCCAACCATTACTTCTGGCATAATTGATATTTCAGATGATGACTGATTTTATTTTCGAATTGGCATTGATCCTGCAACAGGCAATGCTTTCGATGGATGAACAACATACTGGATGCTAACAAACTATTGGTGTTAGGCTCGCATCATTTTGGAAATTGACATTGTTTTTGCATAGTGCCTAATATAGAACAGTAGCTGCTTATGAGCATAGGATTGCAAATTTTGCAACTCATGTTCGAACCACAGTAGCATAAATTCTTATAGTCCCAGCAGGATCTCAGAAGTAGACTCTTATATCTTGGGCACAAACCTCTGAATTATGATATGTAAAATGCAATTTCAATATAGTCTTCTGTGAACACTGTGCTAAAAAAAAAAAAAAAAAACACAAACATGCCGTTACGTAGCGTATCGTTGACA] [+] EMBL AK103905 [CTACCACCTTCTCGTTGATCCTCCTCCCCGTTCTTGGCTCCCCTCGCATTCGTCCTCACTTCCCTTCTTCCATGGGGGTTCGCCGCCGTGAGTGAGGAGGAGGAGGAGTAGTACTAGGAGGAGGTGAGGCCATGGAGAGGGTGGAGGATCCGGACCTGGAGGACCCGAACCCGGACGTGGGGGAGCTGTTCAGCCACTACGACGGGCTCTACTTCCGCGGCGCGCTCGCCGGCGCCGGCTTCTCCGTCCAGTGGAGCTCGCCGCCGTCGCGGATGGCCGGTTCTTTTGGATCGTGTACCTTCGGAAAACCGGATAATACCATAACATTGTCTGAAACTGTGCTGAAATATCGCTCAAGTATTGATATGAAGAATGCATTGCTGCATCAGATGATCCATGCAATCTTATTTGTAAAGCATCATAGGAAGGACTGCCGGGGTCATGGTCCTATTTTTCGTGCTTGGATGACTGCTATTAACACCTGTTCTATTGACGATCACCAGAGACCACCTGATGGGTACAATATCACCACCAGACATGATTTTTCTCCGGACAAGTCCACCCGCAGCCTAAGTGGTTTTTTGTGGAAGTGTGAATATTGTGGGAATACACTTGTGAGAGCCACAAACATCGGTGCTCCATCTGATGCCTGCTGCATTGAGAATGTTGACAACTGCTCAACCTGTGGCAACATGCTTTGCCACTGGCATAACCACAAGATGAACTGTGGTGGCACATACACAAAGATGGGCACATCAACATCGGCAGAAGTTCAAAACAATGTTCAAGGTACAAAAAGATGCCCAACTGACATGAAAATGGCCAAGTCACAAAGAACCATACGGAAACCAGAGTCACCAGATTCAGATGGATTGCAGGAGAAAGCTACTGTCATGAAACAAAAAGCAGAAGGCGAGCTTCTCGCACTTGTGGCTGGCAGCAATTTAAAATTAACAGGAAGTAACTCTTCAAAGAAGGGAGTGAAGAGGCATAGGCCTGAAGACACTCAAGACACAAATGCTATGCTTTCTACCCCTCTGAAAAACCTGAAGCTGGGCCTAGACTTGGTTTCATCTGGGAAGCACAGGGTGTCATCTATAGTTGGTAGCAATAACACAAAATCATCAAGAGGTAGTGCTTCAAGGAAGCAACGCAAACGACATTCACCTGAGAATGTTCAGAAGTCCAGTGTTCTGCCTGCTCTCTCTCAAAAGAAGCTGAAACTGAAGGAAGACCTGGTTGTATCAGGGAAGAACGAGCCTTTATCCCTAGTGAATTTCAGCAATGGAAAATCAGCAGGAAGTAACTCATCAAAAAAGGTAAGCAAGCAGCATGAACTTGAAGGAGTTCAGAAATCCTGTGTTCAGCCTGCTAGCCCTCCGAGAAAACCGAGGCAAGATCTTGTTGCATCGGTCAAAACCGAGATTTCTTGTCTAGCCAGTCGCAGCGATGCTAAAGTGTTGAGAGGCA GCTCCTCAAAATGTGCAGGCAATCAGCATGAGCCTGCAGACATTCAGAAAAGCATCGCTCTGCCTTCTGCCTCTGAAAGTAAACTCAAGCGACAGAATGAAATTAGCTCCTCAACTAAGGCAGGGATGCAGGACAAGCCTAGAGGCACTCAGAAAACCATTGATCTGCCTGCTTCCCCTCAAACAAAACTGAAGCAATCAGTGTTGCAGAAGCAAAAGAGACAGTGCGGAACTAGGAAGTCAGCTAATGAGCAATTTGCCGTGATTAGTGCTTGGCTGAACTACTACGAGTCAGAAGGATCAAGTGGATCAACTGAGCCCCTTGTAAACAAAAGAACAGAGCGGAGAAGGATAGCGAGGAATAGGATAACTTATACACGGTCAAGGAAGCAAAATGCCAGGGGAAATGCTTCCATCAAGTCCCAACCTTCTGAAGATGACTCGTCTCAAGCAAAAGCTGCAGCTCCATGCTTGGAGATTGTTGTTAGCACCCCTTCTGAGCAGGTGGTAAATCAATCCCCCGGATGCCAGTCCCAGTCACCAGCTCCATACTTGGCGATCGTTCCTTTCGACGCTGCTCATGATATGGTTCCACTTCAGTCAGCAGATCCACCCGGTTTAACTGATGATCCAACCATTACTTCTGGCATAATTGATATTTCAGATGATGACTGATTTTATTTTCGAATTGGCATTGATCCTGCAACAGGCAATGCTTTCGATGGATGAACAACATACTGGATGCTAACAAACTATTGGTGTTAGGCTCGCATCATTTTGGAAATTGACATTGTTTTTGCATAGTGCCTAATATAGAACAGTAGCTGCTTATGAGCATAGGATTGCAAATTTTGCAACTCATGTTCGAACCACAGTAGCATAAATTCTTATAGTCCCAGCAGGATCTCAGAAGTAGACTCTTATATCTTGGGCACAAACCTCTGAATTATGATATGTAAAATGCA ] [+] EMBL AK069164 [ TCCTCCCCGTTCTTGGCTCCCCTCGCATTCGTCCTCACTTCCCTTCTTCCATGGGGGTTCGCCGCCGTGAGTGAGGAGGAGGAGGAGTAGTACTAGGAGGAGGTGAGGCCATGGAGAGGGTGGAGGATCCGGACCTGGAGGACCCGAACCCGGACGTGGGGGAGCTGTTCAGCCACTACGACGGGCTCTACTTCCGCGGCGCGCTCGCCGGCGCCGGCTTCTCCGTCCAGTGGAGCTCGCCGCCGTCGCGGATGGCCGGTTCTTTTGGATCGTGTACCTTCGGAAAACCGGATAATACCATAACATTGTCTGAAACTGTGCTGAAATATCGCTCAAGTATTGATATGAAGAATGCATTGCTGCATCAGATGATCCATGCAATCTTATTTGTAAAGCATCATAGGAAGGACTGCCGGGGTCATGGTCCTATTTTTCGTGCTTGGATGACTGCTATTAACACCTGTTCTATTGACGATCACCAGAGACCACCTGATGGGTACAATATCACCACCAGACATGATTTTTCTCCGGACAAGTCCACCCGCAGCCTAAGTGGTTTTTTGTGGAAGTGTGAATATTGTGGGAATACACTTGTGAGAGCCACAAACATCGGTGCTCCATCTGATGCCTGCTGCATTGAGAATGTTGACAACTGCTCAACCTGTGGCAACATGCTTTGCCACTGGCATAACCACAAGATGAACTGTGGTGGCACATACACAAAGATGGGCACATCAACATCGGCAGAAGTTCAAAACAATGTTCAAGGTACAAAAAGATGCCCAACTGACATGAAAATGGCCAAGTCACAAAGAACCATACGGAAACCAGAGTCACCAGATTCAGATGGATTGCAGGAGAAAGCTACTGTCATGAAACAAAAAGCAGAAGGCGAGCTTCTCGCACTTGTGGCTGGCAGCAATTTAAAATTAACAGGAAGTAACTCTTCAAAGAAGGGAGTGAAGAGGCATAGGCCTGAAGACACTCAAGACACAAATGCTATGCTTTCTACCCCTCTGAAAAACCTGAAGCTGGGCCTAGACTTGGTTTCATCTGGGAAGCACAGGGTGTCATCTATAGTTGGTAGCAATAACACAAAATCATCAAGAGGTAGTGCTTCAAGGAAGCAACGCAAACGACATTCACCTGAGAATGTTCAGAAGTCCAGTGTTCTGCCTGCTCTCTCTCAAAAGAAGCTGAAACTGAAGGAAGACCTGGTTGTATCAGGGAAGAACGAGCCTTTATCCCTAGTGAATTTCAGCAATGGAAAATCAGCAGGAAGTAACTCATCAAAAAAGGTAAGCAAGCAGCATGAACTTGAAGGAGTTCAGAAATCCTGTGTTCAGCCTGCTAGCCCTCCGAGAAAACCGAGGCAAGATCTTGTTGCATCGGTCAAAACCGAGATTTCTTGTCTAGCCAGTCGCAGCGATGCTAAAGTGTTGAGAGGCA GCTCCTCAAAATGTGCAGGCAATCAGCATGAGCCTGCAGACATTCAGAAAAGCATCGCTCTGCCTTCTGCCTCTGAAAGTAAACTCAAGCGACAGAATGAAATTAGCTCCTCAACTAAGGCAGGGATGCAGGACAAGCCTAGAGGCACTCAGAAAACCATTGATCTGCCTGCTTCCCCTCAAACAAAACTGAAGCAATCAGTGTTGCAGAAGCAAAAGAGACAGTGCGGAACTAGGAAGTCAGCTAATGAGCAATTTGCCGTGATTAGTGCTTGGCTGAACTACTACGAGTCAGAAGGATCAAGTGGATCAACTGAGCCCCTTGTAAACAAAAGAACAGAGCGGAGAAGGATAGCGAGGAATAGGATAACTTATACACGGTCAAGGAAGCAAAATGCCAGGGGAAATGCTTCCATCAAGTCCCAACCTTCTGAAGATGACTCGTCTCAAGCAAAAGCTGCAGCTCCATGCTTGGAGATTGTTGTTAGCACCCCTTCTGAGCAGGTGGTAAATCAATCCCCCGGATGCCAGTCCCAGTCACCAGCTCCATACTTGGCGATCGTTCCTTTCGACGCTGCTCATGATATGGTTCCACTTCAGTCAGCAGATCCACCCGGTTTAACTGATGATCCAACCATTACTTCTGGCATAATTGATATTTCAGATGATGACTGATTTTATTTTCGAATTGGCATTGATCCTGCGACAGGCAATGCTTTCGATGGATGAACAACATACTGGATGCTAACAAACTATTGGTGTTAGGCTCGCATCATTTTGGAAATTGACATTGTTTTTGCATAGTGCCTAATATAGAACAGTAGCTGCTTATGAGCATAGGATTGCAAATTTTGCAACTCATGTTCGAACCACAGTAGCATAAATTCTTATAGTCCCAGCAGGATCTCAGAAGTAGACTCTTATATCTTGGGCACAAACCTCTGAATTATGATATGTAAAATGCAATTTCAATATAGTCTTCTGTGA ] [+] EMBL CA764338 [ CTTGTCTAGCCAGTCACAGCGATGCTAAAGTGTTGAGAGGCA GCTCCTCAAAATGCGCAGGCAATCAGCATGAGCCTGCAGACATTCAGAAAAGCATCGCTCTGCCTTCTGCCTCTGAAAGTAAACTCAAGCGACAGAATGAAATTAGCTCCTCAACTAAGGCAGGGATGCAGGACAAGCCTAGAGGCACTCAGAAAACCATTGATCTGCCTGCTTCCCCTCAAACAAAACTGAAGCAATCAGTGTTGCAGAAGCAAAAGAGACAGTGCGGATGTAGGAAGTCAGCTAATGAGCAATTTGCCGTGATTAGTGCTTGGCTGAACTACTACGAGTCAGAAGGATCAAGTGGATCAACTGAGCCCCTTGTAAACAAAAGAACAGAGCGGAGAAGGATAGCGAGGAATAGGATAACTTGTACACGGTCAAGGAAGCAAAATGCCAGGGGAAATGCTTCCATCAAGTCCCAACCTTCTGAAGATGACTCGTCTCAAGCAAAAGCTGCAGCTCCATGCTTGGAGATTGTTGTTAGCACCCCTTCTGAGCAGGTGGTAAATCAATCCCCCGGATGCCAGTCCCAGTCACCATCTCCATACTTGGCGATCGTTCCTTTCGACGCTGCTCATGATATGGTTCCACTTCAGTCAGCAGATCCACCCGGTTTAACTGATGATCCAACCATTACTTCTGGCATAATTGATATTTCAGATGATGACTGATTTTATTTTCGAATTGGCATTGATCCTGCAACAGGCAATGCTTTCGATGGATGAAC ACATACTGGATGCTAAC AACTATTGGNGGTAGGCTCGCATCATTTTGGAAA TGACATTGNTTTTGCATAGGGCCTAA ATANAACAGTAGCTGCTTAT ] [+] EMBL CF331297 [ AGAGGCANGCTCCTCAAAATGTGCAGGCAATCAGCATGAGCCTGCAGACATTCAGAAAAGCATCTCTCTGCCTTCTGCTTCTGAAAGTAAACTCAAGCGACAGAATGAAATTAGCTCCTCAACTAAGGCAGGGATGCAGGACAAGCCTAGAGGCACTCAGAAAACCATTGATCTGCCTGCTTCCCCTCAAACGAAACTGAAGCAATCAGTGTTGCAGAAGCAAAAGAGACAGTGCGGAACTAGGAAGTCAGCTAATGAGCAATTTGCCGTGATTAGTGCTTGGCTGAACTACTACGAGTCAGAAGGATCAAGTGGATCAACTGAGCCCCTTGTAAACAAAAGAACAGAGCGGAGAAGGATAGCGAGGAATAGGATAACTTATACACGGTCAAGGAAGCAAAATGCCAGGGGAAATGCTTCCATCAAGTCCC ] [+] EMBL CB097021 [ AAACCATTGATCTGCCTGCTTCCCCTCAAACAAAACTGAAGCAATCAGTGTTGCAGAAGCAAAAGAGACAGTGCGGATATAGGAAGTCAGCTAATGAGCAATTTGCCGTGATTAGTGCTTGGCTGAACTACTACGAGTCAGAAGGATCAAGTGGATCAACTGAGCCCCTTGTAAACAAAAGAACAGNNCGGAGAAGGATAGCGAGGAATAGGATAACTTGTACANGGGNAAGGAAGCAAANNGCNCCGGGAAATGCTTCCATCAAGTCCCAACCTTCTGAAGATGACTCGTCTCAAGCAAAANANNNAGCTCCATGCTTGGAGATTGTTGTTAGCACCCCTTCTGAGCAGGTGGTAAATCAATCCCCCGGATGCCAGTCCCAGTCACCATCTCCATACTTGGCGATCGTTCCTTTCGACGCTGNTCATGATAT ] [-] EMBL CF331298 [ AGGATAGCGAGGAATAGGATAACTTATACACGGTCAAGGAAGCAAAATGCCAGGGGAAATGCTTCCATCAAGTCCCAACCTTCTGAAGATGACTCGTCTCAAGCAAAAGCTGCAGCTCCATGCTTGGAGATTGTTGTTAGCACCCCTTCTGAGCAGGTGGTAAATCAATCCCCCGGATGCCAGTCCCAGTCACCAGCTCCATACTTGGCGATCGTTCCTTTCGACGCTGCTCATGATATGGTTCCACTACAGTCAGCAGATCCACCCGGTTTAACTGATGATCCAACCATTACTTCTGGCATAATTGATATTTCAGATGATGACTGATTTTATTTTCGAATTGGCATTGATCCTGCAACAGGCAATGCTTTCGATGGATGAACAACATACTGGATGCTAACAAACTATTGGTGTTAGGCTCGCATCATTTTGGAAATTGACATTGTTTTTGCATAGTGCCTAATATAGAACAGTAGCTGCTTATGAGCATAGGATTGCAAATTTTGCAACTCATGTTCGAACCACAGTAGCATAAATTCTTATAGTCCCAGCAGGATTTCAGAAGTAGACTCTTATATCTTGGGCACAAACCTCTGAATTATGATATGTAAAATGCAATTTCAATATAGTCTTCTGTGAACACTGTGCTAAAAAAAAAAAAAAAAAACACAAACATGCCGTTACGTAGCGTATCGTTGACA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||