These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9233#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 743 fasta sequence [GAGTAGAAAAGCACATATATATGCAGTCGTAGAAAGCAGCAGCAGCCGATTATATATAGCTAGCTACTAGCTCTAACTGATCGGCCGGCCATGGGGAAGACGGAGCACAAGAAGAAGCAGCAGCAGCACGGCGGCGATGAGGCGGCGGCGGCGGCCAAGGAGAGGCTGGATCGCTTCAAGGCGTGGCTGATGCATTTCGACGGCGACGGCGACGAGCATATCAGCCGGAGGGAGCTCCGGGACGCCATCCGCTCCGGCGGCGCCCGGTTCGCCACCGTCCGGGCGTGGGTCAACCTCTACCTCGCCGACAAGAACCGGAACGGCGTCATCGACGACGGCGAGATCAAGCACCTCATGGACCTGACCGAGAAGGACCTCGACCTCAGCAAGCTGCAGCCCACGCCTGCGGCAGCACGGCCGACGGCGACCGGCGCCCCGCCGGCCATGGT-GGTGGTCTCGGCGTGCCAGTTCCAGACGACTCCTCTCGTCTCTCGTACCATTGACCTACGCAAATTAACTGCCAAACCAGTACTTTCTAGTACCGCCAATAATTAGATCTCGTTCAGTTTGGA-GGGGGTTAAAAAGGATTAAGAGGGAATAATTCCTCACCGGGATAATAAACTCTATTCGATATTTCGATTAATGCCCAGGCGAGAAGGATTGAAGAAGATTCATTCCACACTAAATTATATGGTGTAGAATTATTCCCTCTATAATCCACTAGTCATTTTTTAAAAAAAAAA] [+] EMBL CF335089 [GAGTAGAAAAGCACATATATATGCAGTCGTAGAAAGCAGCAGCAGCCGATTATATATAGCTAGCTACTAGCTCTAACTGATCGGCCGGCCATGGGGAAGACGGAGCACAAGAAGAAGCAGCAGCAGCACGGCGGCGATGAGGCGGCGGCGGCGGCCAAGGAGAGGCTGGATCGCTTCAAGGCGTGGCTGATGCATTTCGACGGCGACGGCGACGAGCATATCAGCCGGAGGGAGCTCCGGGACGCCATCCGCTCCGGCGGCGCCCGGTTCGCCACCGTCCGGGCGTGGGTCAACCTCTACCTCGCCGACAAGAACCGGAACGGCGTCATCGACGACGGCGAGATCAAGCACCTCATGGACCTGACCGAGAAGGACCTCGACCTCAGCAAGCTGCAGCCCACGCCTGCGGCAGCACGGCCGACGGCGACCGGCGCCCCGCCGG CATGGTGGGTGGTCTCGGCGTGCCAGTTCCAGACGACTCCTCTCGTCTCTCGTACCATTGACCTACGCAAATTAACTGCCAAACCAGTACTTTCTAGTACCGCCAATAATTAGATCTCGTTCAGTTTGGAGGGGGGTTAAAAAGGATTAAGAGGGAATAATTCCTCACCGGGATAATAAACTCTATTCGATATTTCG ] [+] EMBL AK062716 [ ATATATGCAGTCGTAGAAAGCAGCAGCAGCCGATTATATATAGCTAGCTACTAGCTCTAACTGATCGGCCGGCCATGGGGAAGACGGAGCACAAGAAGAAGCAGCAGCAGCACGGCGGCGATGAGGCGGCGGCGGCGGCCAAGGAGAGGCTGGATCGCTTCAAGGCGTGGCTGATGCATTTCGACGGCGACGGCGACGAGCATATCAGCCGGAGGGAGCTCCGGGACGCCATCCGCTCCGGCGGCGCCCGGTTCGCCACCGTCCGGGCGTGGGTCAACCTCTACCTCGCCGACAAGAACCGGAACGGCGTCATCGACGACGGCGAGATCAAGCACCTCATGGACCTGACCGAGAAGGACCTCGACCTCAGCAAGCTGCAGCCCACGCCTGCGGCAGCACGGCCGACGGCGACCGGCGCCCCGCCGGCCATGGT GGTGGTCTCGGCGTGCCAGTTCCAGACGACTCCTCTCGTCTCTCGTACCATTGACCTACGCAAATTAACTGCCAAACCAGTACTTTCTAGTACCGCCAATAATTAGATCTCGTTCAGTTTGGA GGGGGTTAAAAAGGATTAAGAGGGAATAATTCCTCACCGGGATAATAAACTCTATTCGATATTTCGATTAATGCCCAGGCGAGAAGGATTGAAGAAGATTCATTCCACACTAAATTATATGGTGTAGAATTATTCCCTCTATAATCCACTAGTCAT ] [+] EMBL AU057722 [ AGCAGCAGCAGCCGATTATATATAGCTAGCTACTAGCTCTAACTGATCGGCCGGCCATGGGGAAGACGGAGCACAAGAAGAAGCAGCAGCAGCACGGCGGCGATGAGGCGGCGGCGGCGGCCAAGGAGAGGCTGGATCGCTTCAAGGCGTGGCTGATGCATTTCGACGGCGACGGCGACGAGCATATCAGCCGGAGGGAGCTCCGGGACGCCATCCGCTCCGGCGGCGCCCGGTTCGCCACCGTCCGGGCGTGGGTCAACCTCTACCTCGCCGACAAGAACCGGAACGGCGTCATCGACGACGGCGAGATCAAGCACCTCATGGACCTGACCGAGAAGGACCTCGACCTCAGCAAGCTGCAGCCCACGCCTGC ] [+] EMBL AU162753 [ ATGGGGAAGACGGAGCACAAGAAGAAGCAGCANCAGCACGGCGGCGATGAGGCGGCGGCGGCGGCCAAGGAGAGGCTGGATCGCTTCAAGGCGTGGCTGATGCATTTCGACGGCGACGGCGACGAGCATATCAGCCGGA GGAGCTCCGGGACGCCATCCGCTCCGGCGGCGCCCGGTTCGCCACCGTCCGGGCG ] [-] EMBL CF335090 [ AGGCGTGGCTGATGCATTTCGACGGCGACGGCGACGAGCATATCAGCCGGAGGGAGCTCCGGGACGCCATCCGCTCCGGCGGCGCCCGGTTCGCCACCGTCCGGGCGTGGGTCAACCTCTACCTCGCCGACAAGAACCGGAACGGCGTCATCGACGACGGCGAGATCAAGCACCTCATGGACCTGACCGAGAAGGACCTCGACCTCAGCAAGCTGCAGCCCACGCCTGCGGCAGCACGGCCGACGGCGACCGGCGCCCCGCCGGCCATGGT GGTGGTCTCGGCGTGCCAGTTCCAGACGACTCCTCTCGTCTCTCGTACCATTGACCTACGCAAATTAACTGCCAAACCAGTACTTTCTAGTACCGCCAATAATTAGATCTCGTTCAGTTTGGA GGGGGTTAAAAAGGATTAAGAGGGAATAATTCCTCACCGGGATAATAAACTCTATTCGATATTTCGATTAATGCCCAGGCGAGAAGGATTGAAGAAGATTCATTCCACACTAAATTATATGGTGTAGAATTATTCCCTCTATAATCCACTAGTCATTTTTTAAAAAAAAAA] [+] EMBL AU057494 [ cnGCACGGCCGACGGCGACCGGCGCCCCGCCGGCCATGGT GGTGGTCTCGGCGTGCCNGTTCCAGACGACTCCTCTCGTCTCTCGTNCCATTGACCTACGCAAATTAACTGCCAAACCAGTACTTTCTAGTNCCGCCNATAATTAGATCTCGTTCAGTTTGGN GGGGGTTAAAAAGGATTAAGAGGGNATAATTCCTCACCGGGATAATAAACTCTATTCGATATTTCGATTAATGCCCAGGCGAGAAGGATTGAAGAAaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||