These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9255#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2047 fasta sequence [AAACTTTTTTTTGTGGCACACGCGTAACCTCCAACTTTCTTAATGGCATATGGGTAAAAGACTCCTGCTCCTTCGCTTCGCTTCTGTTCGTCTCTCCGCCGTGCGCCGTCCGTCGTCCGCCATGGAGGTTGCTGGCCCTCCTCCGTTGACCAGCGCTTCCCCTAGCCCCTGCCGCTCAACACCAACTGTGGCCGGATCTAGTTGTTTGGCGGCTCGCGAGAAAGAAGTTTTGGTGGTCTAGATCTGGTCAGTTCATCCTCCCTTTCGAGCTGATCTCTCACCACCGAGCCTTTTCCCCACATCCCTTCTCGTCGTTCGGTTTGAGGTGGTCAGATCTACCGGCGGCAAAGCTGCTGGATGCCCTCACTTCGTGTGGCTGTGAGATCATCGGGGTTAGAACTGCCAGAATCGCTTGGACTCGAGGAAGAAGGAGAGCGAGCAAGACGAGGGATGCAAATGGGCGACGACCTGGGTGTGGAGCGGTGACCCCAGCTATCGGATGCAGCAGTTTGCACGCGCGGGTGCAACACGGAGCACGCGCTCAGCCTGGCTGAGTAGCGAAGTTTGCCCGAATCGGGCGTTCCTCCGGAGCCTGGCTGGCGACCGCTTTTTGCACGCGCTGGGCCTGGCTGGGAGGTCCATGCAAGCAACCAACAAGGTAAATTTGTATGCATAGGTGCGGGCCAAGCCTGATGCAGGCAACCAAACAGACCCTCAGTCCATCTGCACATTGAAAATGCTCAAGGTCCAAGAGATGTGATAGTATATCAGATGGCATGCCATTGACTTGTGTGCCAGAAGATTCTATGAAGTAAAAAACTAAAATGCTTGATTTTTCTTTGCTCTCTATGGTTTATATTCAAATTTTTCTCTACTGATAGATTAATATCACTTTTGAACAGCTCTACTAAACAATTAATTTAATTTGTGTGAATTTTATGTTGGTGTCAAAATTTGGCACTTTAAGACCTTGGCATAGCAATTTCATTCTTTGTATCCCCTGCTCTAAGTTGGTATCATTTCAGTTTACTTGCTTTATAATTACTAAACTTGAAGGTCGACATGCACTTCACTGGGAAATTTTAAGTGAAACCCTGAATCCCTCAAATCTCCTATTGAACTTTATCATGAATTGCTAAAGTTGCTGATTTTCTTGAGTAGGAACCAAGCTATTCACTTAAAATTCATGTACTAGCCTCTCAAAATTTGTATGAATATTGGGGTTTTATTTTAAGAGCAAATTAGATCAGAGTTCAGAGTCTACTCATGCTGCTTGCTGTTGGGTATACCTCCCAGGGAAGGGATGCTCTTATCCATCTTCCAGGAAATTGGTGGTAGCTGATTTCAAATGCGAAATTAGTTATTATTGTTTCTGTTCTAATAGAAATTGATTTCACCGAGTCAATAACTTGCCATATTTATTTATTTACTCTTAAATTCCATTCTTATGAATGATTTGACAAACAATTTTTTCCTTGTCACAGAACAAGCATGTAAACGTGTTTGTTTACACAATACATGAAACAATATGTAGAATCATACTTTACACTGCCATTTTCTCCAAAGAGGCTGTGATAAGCACTTCTGCATCCACTTGAACTCATATATACTTGTGTGCCCTTTAATTTTGTAGGATAATTATATGAAAGAAGCCCCTCTATATCTGGAGTTAGGGAGCACATTTTTACTAGCAGGATTGTAGTTTTGTGACTAATAAGCAACAGCTGCTTGCAGACCCTCTGAAGTGAGATGTTTACCTATCTCACTATTTCACCCTCACATGTTTGTTATACAATTGAATGGATATGCATATTTTTTTAATAATATTTATTCAAATAGAGTTATCAACCACAAGAAAAAGCTAAGCAAGCATATCTTATGTTAATGTTCTTGTGTAGATTTGAAATATCATGTGATGAACAAGGTCATTTCATTTGTTGCCTTATAAACATATTAAGCAGACCATTTTAAAGTGCACTTTCACACTACTCTTTTATATGTTGTATGCTTTTGCAGCTCTACATAAGAATTTTATAATAAAAAATAC] [+] EMBL AK100162 [AAACTTTTTTTTGTGGCACACGCGTAACCTCCAACTTTCTTAATGGCATATGGGTAAAAGACTCCTGCTCCTTCGCTTCGCTTCTGTTCGTCTCTCCGCCGTGCGCCGTCCGTCGTCCGCCATGGAGGTTGCTGGCCCTCCTCCGTTGACCAGCGCTTCCCCTAGCCCCTGCCGCTCAACACCAACTGTGGCCGGATCTAGTTGTTTGGCGGCTCGCGAGAAAGAAGTTTTGGTGGTCTAGATCTGGTCAGTTCATCCTCCCTTTCGAGCTGATCTCTCACCACCGAGCCTTTTCCCCACATCCCTTCTCGTCGTTCGGTTTGAGGTGGTCAGATCTACCGGCGGCAAAGCTGCTGGATGCCCTCACTTCGTGTGGCTGTGAGATCATCGGGGTTAGAACTGCCAGAATCGCTTGGACTCGAGGAAGAAGGAGAGCGAGCAAGACGAGGGATGCAAATGGGCGACGACCTGGGTGTGGAGCGGTGACCCCAGCTATCGGATGCAGCAGTTTGCACGCGCGGGTGCAACACGGAGCACGCGCTCAGCCTGGCTGAGTAGCGAAGTTTGCCCGAATCGGGCGTTCCTCCGGAGCCTGGCTGGCGACCGCTTTTTGCACGCGCTGGGCCTGGCTGGGAGGTCCATGCAAGCAACCAACAAGGTAAATTTGTATGCATAGGTGCGGGCCAAGCCTGATGCAGGCAACCAAACAGACCCTCAGTCCATCTGCACATTGAAAATGCTCAAGGTCCAAGAGATGTGATAGTATATCAGATGGCATGCCATTGACTTGTGTGCCAGAAGATTCTATGAAGTAAAAAACTAAAATGCTTGATTTTTCTTTGCTCTCTATGGTTTATATTCAAATTTTTCTCTACTGATAGATTAATATCACTTTTGAACAGCTCTACTAAACAATTAATTTAATTTGTGTGAATTTTATGTTGGTGTCAAAATTTGGCACTTTAAGACCTTGGCATAGCAATTTCATTCTTTGTATCCCCTGCTCTAAGTTGGTATCATTTCAGTTTACTTGCTTTATAATTACTAAACTTGAAGGTCGACATGCACTTCACTGGGAAATTTTAAGTGAAACCCTGAATCCCTCAAATCTCCTATTGAACTTTATCATGAATTGCTAAAGTTGCTGATTTTCTTGAGTAGGAACCAAGCTATTCACTTAAAATTCATGTACTAGCCTCTCAAAATTTGTATGAATATTGGGGTTTTATTTTAAGAGCAAATTAGATCAGAGTTCAGAGTCTACTCATGCTGCTTGCTGTTGGGTATACCTCCCAGGGAAGGGATGCTCTTATCCATCTTCCAGGAAATTGGTGGTAGCTGATTTCAAATGCGAAATTAGTTATTATTGTTTCTGTTCTAATAGAAATTGATTTCACCGAGTCAATAACTTGCCATATTTATTTATTTACTCTTAAATTCCATTCTTATGAATGATTTGACAAACAATTTTTTCCTTGTCACAGAACAAGCATGTAAACGTGTTTGTTTACACAATACATGAAACAATATGTAGAATCATACTTTACACTGCCATTTTCTCCAAAGAGGCTGTGATAAGCACTTCTGCATCCACTTGAACTCATATATACTTGTGTGCCCTTTAATTTTGTAGGATAATTATATGAAAGAAGCCCCTCTATATCTGGAGTTAGGGAGCACATTTTTACTAGCAGGATTGTAGTTTTGTGACTAATAAGCAACAGCTGCTTGCAGACCCTCTGAAGTGAGATGTTTACCTATCTCACTATTTCACCCTCACATGTTTGTTATACAATTGAATGGATATGCATATTTTTTTAATAATATTTATTCAAATAGAGTTATCAACCACAAGAAAAAGCTAAGCAAGCATATCTTATGTTAATGTTCTTGTGTAGATTTGAAATATCATGTGATGAACAAGGTCATTTCATTTGTTGCCTTATAAACATATTAAGCAGACCATTTTAAAGTGCACTTTCACACTACTCTTTTATATGTTGTATGCTTTTGCAGCTCTACATAAGAATTTTATAATAAAAAATAC] consensusID : consensus_9255#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1671 fasta sequence [TCTCCGCCGTGCGCCGTCCGTCGTCCGCCATGGAGGTTGCTGGCCCTCCTCCGTTGACCAGCGCTTCCCCTAGCCCCTGCCGCTCAACACCAACTGTGGCCGGATCTAGTTGTTTGGCGGCTCGCGAGAAAGAAGTTTTGGTGGTCTAGATCTGGTCAGTTCATCCTCCCTTTCGAGCTGATCTCTCACCACCGAGCCTTTTCCCCACATCCCTTCTCGTCGTTCGGTTTGAGGTGGTCAGATCTACCGGCGGCAAAGCTGCTGGATGCCCTCACTTCGTGTGGCTGTGAGATCATCGGGGTTAGAACTGCCAGAATCGCTTGGACTCGAGGAAGAAGGAGAGCGAGCAAGACGAGGGATGCAAATGGGCGACGACCTGGGTGTGGAGCGGTGACCCCAGCTATCGGATGCAGCAGTTTGCACGCGCGGGTGCAACACGGAGCACGCGCTCAGCCTGGCTGAGTAGCGAAGTTTGCCCGAATCGGGCGTTCCTCGGGAGCCTGGCTGGCGACCGCTTTTTGCACGCGCTGGGCCTGGCTGGGAGGTCCATGCAAGCAACCAACAAGGATAATTATATGAAAGAAGCCCCTCTATATCTGGAGTTAGGGAGCACATTTTTACTAGCAGAAATGGTGAACATGGAGTAGTGCCATATTATGTCAAGAGTTATCTTAATCTAACAGAGGATACACCGTCAACTATATCTTTCTCCATCGCACTCTCTAAAATATATATTTATCAGGTATATCCTCTTCATCACACTCTGAAATATATTTGGCTTATTTACATAATCCTATCATGCTTTCTTTCACAGGAAGATGTTTGTAGAACTTATTGATTTGGGTAATATTTATTCGTCGATGTCAACCATTTCTTGTCCACAATGAATGGTTGATCGTATTCAAGATGACAAAGCCATATTTATGCTTCATAGTTTGAGACTACTATATGGTGAGAGAAATTTATGTATGCCTACAAGAGTGCCTTGTATGATTTTTGAAAGATCACCAAAATGGATTTTCCTCAAAAGATTCTTCTGTACTTCAAATGCTACGTGTACAAAGTTCGCATATAATGAACTAGAAAAAAAATGCAGGTGGCTATGTCTAGCTATTACTATAGACCACTGCCTAACAACATCCTTATCGTACTTATCCGCAATTTTCATTGAGCCTATGCCCAATCAACCGTGCTTTTTATAAACATAGGAAGTATTACTGTTGCTTTCTTGCCCTATACATCTCTTGCATACCACCCTTGAGAGTTTCTGAGAATATTTGCAAAAAAATATTGATTAACCTTGCCATTAGCAGGAAAAAACAAAGCAATCTGAACGCAACACAGATTCAACAGGATGATCCAATGACAACAGTGAACACTATGGGTTAAGGTATCCAAACATAGCATATGCTTTCATCACCTACTGCAAACATCAGTCACCTTTTACACCAGCTGTATGCAGGTGGTGCGCCAAGCCGCCAAGGGCGCGCGCCCCAGATCCTAGTATCCTTCAACTTCAAGATGAAAGACGTAAATGAACCCATGTATGAACATGCCTACATCTAATAGGCATCCAACTATGCAAGGAAAGCCTATTTAGCCTCCATTAACTCTTGCTTTTGATTGAATAGTATCTCTCAACTCCAAAACGGGGTATAACGTCTACCCATC] [+] EMBL AK108561 [TCTCCGCCGTGCGCCGTCCGTCGTCCGCCATGGAGGTTGCTGGCCCTCCTCCGTTGACCAGCGCTTCCCCTAGCCCCTGCCGCTCAACACCAACTGTGGCCGGATCTAGTTGTTTGGCGGCTCGCGAGAAAGAAGTTTTGGTGGTCTAGATCTGGTCAGTTCATCCTCCCTTTCGAGCTGATCTCTCACCACCGAGCCTTTTCCCCACATCCCTTCTCGTCGTTCGGTTTGAGGTGGTCAGATCTACCGGCGGCAAAGCTGCTGGATGCCCTCACTTCGTGTGGCTGTGAGATCATCGGGGTTAGAACTGCCAGAATCGCTTGGACTCGAGGAAGAAGGAGAGCGAGCAAGACGAGGGATGCAAATGGGCGACGACCTGGGTGTGGAGCGGTGACCCCAGCTATCGGATGCAGCAGTTTGCACGCGCGGGTGCAACACGGAGCACGCGCTCAGCCTGGCTGAGTAGCGAAGTTTGCCCGAATCGGGCGTTCCTCGGGAGCCTGGCTGGCGACCGCTTTTTGCACGCGCTGGGCCTGGCTGGGAGGTCCATGCAAGCAACCAACAAGGATAATTATATGAAAGAAGCCCCTCTATATCTGGAGTTAGGGAGCACATTTTTACTAGCAGAAATGGTGAACATGGAGTAGTGCCATATTATGTCAAGAGTTATCTTAATCTAACAGAGGATACACCGTCAACTATATCTTTCTCCATCGCACTCTCTAAAATATATATTTATCAGGTATATCCTCTTCATCACACTCTGAAATATATTTGGCTTATTTACATAATCCTATCATGCTTTCTTTCACAGGAAGATGTTTGTAGAACTTATTGATTTGGGTAATATTTATTCGTCGATGTCAACCATTTCTTGTCCACAATGAATGGTTGATCGTATTCAAGATGACAAAGCCATATTTATGCTTCATAGTTTGAGACTACTATATGGTGAGAGAAATTTATGTATGCCTACAAGAGTGCCTTGTATGATTTTTGAAAGATCACCAAAATGGATTTTCCTCAAAAGATTCTTCTGTACTTCAAATGCTACGTGTACAAAGTTCGCATATAATGAACTAGAAAAAAAATGCAGGTGGCTATGTCTAGCTATTACTATAGACCACTGCCTAACAACATCCTTATCGTACTTATCCGCAATTTTCATTGAGCCTATGCCCAATCAACCGTGCTTTTTATAAACATAGGAAGTATTACTGTTGCTTTCTTGCCCTATACATCTCTTGCATACCACCCTTGAGAGTTTCTGAGAATATTTGCAAAAAAATATTGATTAACCTTGCCATTAGCAGGAAAAAACAAAGCAATCTGAACGCAACACAGATTCAACAGGATGATCCAATGACAACAGTGAACACTATGGGTTAAGGTATCCAAACATAGCATATGCTTTCATCACCTACTGCAAACATCAGTCACCTTTTACACCAGCTGTATGCAGGTGGTGCGCCAAGCCGCCAAGGGCGCGCGCCCCAGATCCTAGTATCCTTCAACTTCAAGATGAAAGACGTAAATGAACCCATGTATGAACATGCCTACATCTAATAGGCATCCAACTATGCAAGGAAAGCCTATTTAGCCTCCATTAACTCTTGCTTTTGATTGAATAGTATCTCTCAACTCCAAAACGGGGTATAACGTCTACCCATC] consensusID : consensus_9255#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1204 fasta sequence [ATGGGTAAAAGACTCCTGCTCCTTCGCTTCGCTTCTGTTCGTCTCTCCGCCGTGCGCCGTCCGTCGTCCGCCATGGAGGTTGCTGGCCCTCCTCCGTTGACCAGCGCTTCCCCTAGCCCCTGCCGCTCAACACCAACTGTGGCCGGATCTAGTTGTTTGGCGGCTCGCGAGAAAGAAGTTTTGGTGGTCTAGATCTGGTCAGTTCATCCTCCCTTTCGAGCTGATCTCTCACCACCGAGCCTTTTCCCCACATCCCTTCTCGTCGTTCGGTTTGAGGTGGTCAGATCTACCGGCGGCAAAGCTGCTGGATGCCCTCACTTCGTGTGGCTGTGAGATCATCGGGGTTAGAACTGCCAGAATCGCTTGGACTCGAGGAAGAAGGAG-AGCGAGCAAGACGAGGGATGCAAATGGGCGACGACCT-GGGTGTGGAGCGGTGACCCCAGCTATCGGATGCAGCAGTTTGCACGCGCGGGTGCAACACGGAGCACGCGCTCAGCCTGGCTGAGTAGCGAAGTTTGCCCGAATCGGGCGTTCCTCCGGAGCCTGGCTGGCGACCGCTTTTTGCACGCGCTGGGCCTGGCTGGGAGGTCCATGCAAGCAACCAACAAGGATAATTATATGAAAGAAGCCCCTCTATATCTGGAGTTAGGGAGCACATTTTTACTAGCAGAAATGGTGAACATGGAGTAGTGCCATATTATGTCAAGAGTTATCTTAATCTAACAGAGGATACACCGTCAACTATATCTTTCTCCATCGCACTCTCTAAAATATATATTTATCAGGAAGATGTTTGTAGAACTTATTGATTTGGGTAATATTTATTCGTCGATGTCAACCATTTCTTGTCCACAATGAATGGTTGATCGTATTCAAGATGACAAAGCCATATTTATGCTTCATAGTTTGAGACTACTATATGGAAAAAACAAAGCAATCTGAACGCAACACAGATTCAACAGGATGATCCAATGACAACAGTGAACACTATGGGTTAAGGTATCCAAACATAGCATATGCTTTCATCACCTACTGCAAACATCAGTCACCTTTTACACCAGCTGTATGCAGGTGGTGCGCCAAGCCGCCAAGGGCGCGCGCCCCAGATCCTAGTATCCTTCAACTTCAAGATGAAAGACGTAAATGAACCCATGTATGAACATGCCTACATCTAATAGGCATCCAACTATGCAAGGAAAGCCTA] [+] EMBL AK103179 [ATGGGTAAAAGACTCCTGCTCCTTCGCTTCGCTTCTGTTCGTCTCTCCGCCGTGCGCCGTCCGTCGTCCGCCATGGAGGTTGCTGGCCCTCCTCCGTTGACCAGCGCTTCCCCTAGCCCCTGCCGCTCAACACCAACTGTGGCCGGATCTAGTTGTTTGGCGGCTCGCGAGAAAGAAGTTTTGGTGGTCTAGATCTGGTCAGTTCATCCTCCCTTTCGAGCTGATCTCTCACCACCGAGCCTTTTCCCCACATCCCTTCTCGTCGTTCGGTTTGAGGTGGTCAGATCTACCGGCGGCAAAGCTGCTGGATGCCCTCACTTCGTGTGGCTGTGAGATCATCGGGGTTAGAACTGCCAGAATCGCTTGGACTCGAGGAAGAAGGAG AGCGAGCAAGACGAGGGATGCAAATGGGCGACGACCT GGGTGTGGAGCGGTGACCCCAGCTATCGGATGCAGCAGTTTGCACGCGCGGGTGCAACACGGAGCACGCGCTCAGCCTGGCTGAGTAGCGAAGTTTGCCCGAATCGGGCGTTCCTCCGGAGCCTGGCTGGCGACCGCTTTTTGCACGCGCTGGGCCTGGCTGGGAGGTCCATGCAAGCAACCAACAAGGATAATTATATGAAAGAAGCCCCTCTATATCTGGAGTTAGGGAGCACATTTTTACTAGCAGAAATGGTGAACATGGAGTAGTGCCATATTATGTCAAGAGTTATCTTAATCTAACAGAGGATACACCGTCAACTATATCTTTCTCCATCGCACTCTCTAAAATATATATTTATCAGGAAGATGTTTGTAGAACTTATTGATTTGGGTAATATTTATTCGTCGATGTCAACCATTTCTTGTCCACAATGAATGGTTGATCGTATTCAAGATGACAAAGCCATATTTATGCTTCATAGTTTGAGACTACTATATGGAAAAAACAAAGCAATCTGAACGCAACACAGATTCAACAGGATGATCCAATGACAACAGTGAACACTATGGGTTAAGGTATCCAAACATAGCATATGCTTTCATCACCTACTGCAAACATCAGTCACCTTTTACACCAGCTGTATGCAGGTGGTGCGCCAAGCCGCCAAGGGCGCGCGCCCCAGATCCTAGTATCCTTCAACTTCAAGATGAAAGACGTAAATGAACCCATGTATGAACATGCCTACATCTAATAGGCATCCAACTATGCAAGGAAAGCCTA] [+] EMBL OSS2272A [ AAAAGACTCCTGCTCCTTCGCTTCGCTTCTGTTCGTCTCTCCGCCGTGCGCCGTCCGTCGTCCGCCATGGAGGTTGCTGGCCCTCCTCCGTTGACCAGCGCTTCCCCTAGCCCCTGCCGCTCAACACCAACTGTGGCCGGATCTAGTTGTTTGGCGGCTCGCGAGAAAGAAGTTTTGGTGGTCTAGATCTGGTCAGTTCATCCTCCCTTTCGAGCTGATCTCTCACCACCGAGCCTTTTCCCCACATCCCTTCTCGTCGTTCGGTTTGAGGTGGTCAGATCTACCGGCGGCAAAGCTGCTGGATGCCCTCACTTCGTGTGGCTGTGAGATCATCGGGGTTAGAACTGCCAGAATCGCTTGGACTCGAGGAGGAAGGAGAAGCGAGCAAGACGAGGGATGCAAATGGGCGACGACCTGGGGTGTTGAGCGGTGACCCCA ] [+] EMBL CK085112 [ CCTTCGCTTCGCTTCTGTTCGTCTCTCCGCCGTGCGCCGTCCGTCGTCCGCCATGGAGGTTGCTGGCCCTCCTCCGTTGACCAGCGCTTCCCCTAGCCCCTGCCGCTCAACACCAACTGTGGCCGGATCTAGTTGTTTGGCGGCTCGCGAGAAAGAAGTTTTGGTGGTCTAGATCTGGTCAGTTCATCCTCCCTTTCGAGCTGATCTCTCACCACCGAGCCTTTTCCCCACATCCCTTCTCGTCGTTCGGTTTGAGGTGGTCAGATCTACCGGCGGCAAAGCTGGTGGATGCCCTCACTTCGTGTGGCTGTGAGATCATCGGGGTTAGAACTGCCAGAATCGCTTGGACTCGAGGAAGAAGGAG AGCGAGCAAGACGAGGGATGCAAATGGGCGACGACCT GGGTGTGGAGCGGTGACCCCAGCTATCGGATGCAGCAGTTTGCACGCGCGGGTGCAACACGGAGCACGCGCTCAGCCTGGCTGAGTAGCGAAGTTTGCCCGAATCGG ] consensusID : consensus_9255#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 654 fasta sequence [GATGCAGCAGTTTGCACGCGCGGGTGCAACACGGAGCACGCGCTCAGCCTGGCTGAGCAGCGAAGTTTGCCCGAATCGGGCGTTCCTCCGGAGCCTGGCTGGCGACCGCTTTTTGCACGCGCTGGGCCTGGCTGGGAGGTCCATGCAAGCAACCAACAAGGATAATTATATGAAAGAAGCCCCTCTATATCTGGAGTTAGGGAGCACATTTTTACTAGCAGAAATGGTGAACATGGAGTAGTGCCATATTACGTCAAGAGTTATCTTAATCTAACAGAGGATACACCGTCAACTATATCTTTCTCCATCGCACTCTCTAAAATATATATTTATCAGGAAGATGTTTGTAGAACTTATTGATTTGGGTAATATTTATTGGTCGATGTCAACCATTTCTTGTCCACAATGAATGGTTGATTGTATTCAAGATGACAAAGCCATATTTATGCTTCATAGTTTGAGACTACTATATGGTGAGAGAAATTTATGTATGCCTACAAGAGTGCCTTGTATGATTTTTGAAAGATCACCAAAATGGATTTTCCTCAAAAGATTCTTCTGTACTTCAAATGCTACGTGTACAAAGTTCGCATATAATGAACTAGAAAAAAAATGCAGGTGGCTATGTCTAGCTATTACTATAAAAAAAAAAAA] [-] EMBL CA760519 [GATGCAGCAGTTTGCACGCGCGGGTGCAACACGGAGCACGCGCTCAGCCTGGCTGAGCAGCGAAGTTTGCCCGAATCGGGCGTTCCTCCGGAGCCTGGCTGGCGACCGCTTTTTGCACGCGCTGGGCCTGGCTGGGAGGTCCATGCAAGCAACCAACAAGGATAATTATATGAAAGAAGCCCCTCTATATCTGGAGTTAGGGAGCACATTTTTACTAGCAGAAATGGTGAACATGGAGTAGTGCCATATTACGTCAAGAGTTATCTTAATCTAACAGAGGATACACCGTCAACTATATCTTTCTCCATCGCACTCTCTAAAATATATATTTATCAGGAAGATGTTTGTAGAACTTATTGATTTGGGTAATATTTATTGGTCGATGTCAACCATTTCTTGTCCACAATGAATGGTTGATTGTATTCAAGATGACAAAGCCATATTTATGCTTCATAGTTTGAGACTACTATATGGTGAGAGAAATTTATGTATGCCTACAAGAGTGCCTTGTATGATTTTTGAAAGATCACCAAAATGGATTTTCCTCAAAAGATTCTTCTGTACTTCAAATGCTACGTGTACAAAGTTCGCATATAATGAACTAGAAAAAAAATGCAGGTGGCTATGTCTAGCTATTACTATAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9255#1 ------------------------------------------------------------ consensus_9255#3 ------------------------------------------------------------ consensus_9255#2 -------------------------------------------------ATGGGTAAAAG 11 consensus_9255#0 AAACTTTTTTTTGTGGCACACGCGTAACCTCCAACTTTCTTAATGGCATATGGGTAAAAG 60 consensus_9255#1 --------------------------------TCTCCGCCGTGCGCCGTCCGTCGTCCGC 28 consensus_9255#3 ------------------------------------------------------------ consensus_9255#2 ACTCCTGCTCCTTCGCTTCGCTTCTGTTCGTCTCTCCGCCGTGCGCCGTCCGTCGTCCGC 71 consensus_9255#0 ACTCCTGCTCCTTCGCTTCGCTTCTGTTCGTCTCTCCGCCGTGCGCCGTCCGTCGTCCGC 120 consensus_9255#1 CATGGAGGTTGCTGGCCCTCCTCCGTTGACCAGCGCTTCCCCTAGCCCCTGCCGCTCAAC 88 consensus_9255#3 ------------------------------------------------------------ consensus_9255#2 CATGGAGGTTGCTGGCCCTCCTCCGTTGACCAGCGCTTCCCCTAGCCCCTGCCGCTCAAC 131 consensus_9255#0 CATGGAGGTTGCTGGCCCTCCTCCGTTGACCAGCGCTTCCCCTAGCCCCTGCCGCTCAAC 180 consensus_9255#1 ACCAACTGTGGCCGGATCTAGTTGTTTGGCGGCTCGCGAGAAAGAAGTTTTGGTGGTCTA 148 consensus_9255#3 ------------------------------------------------------------ consensus_9255#2 ACCAACTGTGGCCGGATCTAGTTGTTTGGCGGCTCGCGAGAAAGAAGTTTTGGTGGTCTA 191 consensus_9255#0 ACCAACTGTGGCCGGATCTAGTTGTTTGGCGGCTCGCGAGAAAGAAGTTTTGGTGGTCTA 240 consensus_9255#1 GATCTGGTCAGTTCATCCTCCCTTTCGAGCTGATCTCTCACCACCGAGCCTTTTCCCCAC 208 consensus_9255#3 ------------------------------------------------------------ consensus_9255#2 GATCTGGTCAGTTCATCCTCCCTTTCGAGCTGATCTCTCACCACCGAGCCTTTTCCCCAC 251 consensus_9255#0 GATCTGGTCAGTTCATCCTCCCTTTCGAGCTGATCTCTCACCACCGAGCCTTTTCCCCAC 300 consensus_9255#1 ATCCCTTCTCGTCGTTCGGTTTGAGGTGGTCAGATCTACCGGCGGCAAAGCTGCTGGATG 268 consensus_9255#3 ------------------------------------------------------------ consensus_9255#2 ATCCCTTCTCGTCGTTCGGTTTGAGGTGGTCAGATCTACCGGCGGCAAAGCTGCTGGATG 311 consensus_9255#0 ATCCCTTCTCGTCGTTCGGTTTGAGGTGGTCAGATCTACCGGCGGCAAAGCTGCTGGATG 360 consensus_9255#1 CCCTCACTTCGTGTGGCTGTGAGATCATCGGGGTTAGAACTGCCAGAATCGCTTGGACTC 328 consensus_9255#3 ------------------------------------------------------------ consensus_9255#2 CCCTCACTTCGTGTGGCTGTGAGATCATCGGGGTTAGAACTGCCAGAATCGCTTGGACTC 371 consensus_9255#0 CCCTCACTTCGTGTGGCTGTGAGATCATCGGGGTTAGAACTGCCAGAATCGCTTGGACTC 420 consensus_9255#1 GAGGAAGAAGGAGAGCGAGCAAGACGAGGGATGCAAATGGGCGACGACCTGGGTGTGGAG 388 consensus_9255#3 ------------------------------------------------------------ consensus_9255#2 GAGGAAGAAGGAGAGCGAGCAAGACGAGGGATGCAAATGGGCGACGACCTGGGTGTGGAG 431 consensus_9255#0 GAGGAAGAAGGAGAGCGAGCAAGACGAGGGATGCAAATGGGCGACGACCTGGGTGTGGAG 480 consensus_9255#1 CGGTGACCCCAGCTATCGGATGCAGCAGTTTGCACGCGCGGGTGCAACACGGAGCACGCG 448 consensus_9255#3 ------------------GATGCAGCAGTTTGCACGCGCGGGTGCAACACGGAGCACGCG 42 consensus_9255#2 CGGTGACCCCAGCTATCGGATGCAGCAGTTTGCACGCGCGGGTGCAACACGGAGCACGCG 491 consensus_9255#0 CGGTGACCCCAGCTATCGGATGCAGCAGTTTGCACGCGCGGGTGCAACACGGAGCACGCG 540 ****************************************** consensus_9255#1 CTCAGCCTGGCTGAGTAGCGAAGTTTGCCCGAATCGGGCGTTCCTCGGGAGCCTGGCTGG 508 consensus_9255#3 CTCAGCCTGGCTGAGCAGCGAAGTTTGCCCGAATCGGGCGTTCCTCCGGAGCCTGGCTGG 102 consensus_9255#2 CTCAGCCTGGCTGAGTAGCGAAGTTTGCCCGAATCGGGCGTTCCTCCGGAGCCTGGCTGG 551 consensus_9255#0 CTCAGCCTGGCTGAGTAGCGAAGTTTGCCCGAATCGGGCGTTCCTCCGGAGCCTGGCTGG 600 *************** ****************************** ************* consensus_9255#1 CGACCGCTTTTTGCACGCGCTGGGCCTGGCTGGGAGGTCCATGCAAGCAACCAACAAGGA 568 consensus_9255#3 CGACCGCTTTTTGCACGCGCTGGGCCTGGCTGGGAGGTCCATGCAAGCAACCAACAAGGA 162 consensus_9255#2 CGACCGCTTTTTGCACGCGCTGGGCCTGGCTGGGAGGTCCATGCAAGCAACCAACAAGGA 611 consensus_9255#0 CGACCGCTTTTTGCACGCGCTGGGCCTGGCTGGGAGGTCCATGCAAGCAACCAACAAGGT 660 *********************************************************** consensus_9255#1 TAATT-ATATGAAAGAAGCCCCTCTATATCTGGAGTTAGGGAGCACATTTTTACTAGCAG 627 consensus_9255#3 TAATT-ATATGAAAGAAGCCCCTCTATATCTGGAGTTAGGGAGCACATTTTTACTAGCAG 221 consensus_9255#2 TAATT-ATATGAAAGAAGCCCCTCTATATCTGGAGTTAGGGAGCACATTTTTACTAGCAG 670 consensus_9255#0 AAATTTGTATGCATAGGTGCGGGCCAAGCCTGATGCAGGCAACCAAACAGACCCT--CAG 718 **** **** * * * * *** * * * ** * ** *** consensus_9255#1 AAATGGTGAACATGGAGTAGTGCCATATTATGTCAAGAGTTATCTTAATCTAACAGAGGA 687 consensus_9255#3 AAATGGTGAACATGGAGTAGTGCCATATTACGTCAAGAGTTATCTTAATCTAACAGAGGA 281 consensus_9255#2 AAATGGTGAACATGGAGTAGTGCCATATTATGTCAAGAGTTATCTTAATCTAACAGAGGA 730 consensus_9255#0 TCCATCTGCACATTGAAAATGCTCAAGGT---CCAAGAGATGTGATAGTATATCAGATGG 775 ** **** ** * ** * ****** * * ** * ** **** * consensus_9255#1 TACACCGTCAACTATATCTTTCTCCATCGCACTCTCTAAAATATATATTTATCAGGTATA 747 consensus_9255#3 TACACCGTCAACTATATCTTTCTCCATCGCACTCTCTAAAATATATATTTATCAGG---- 337 consensus_9255#2 TACACCGTCAACTATATCTTTCTCCATCGCACTCTCTAAAATATATATTTATCAGG---- 786 consensus_9255#0 CATGCCATTGAC----TTGTGTGCCAGAAGATTCTATGAAGTAAAAAACTAAAATGCTTG 831 * ** * ** * * *** * *** * ** ** * * ** * * consensus_9255#1 TCCTCTTCATCACACTCTGAAATATATTTGGCTTATTTACATAATCCTATCATGCTTTCT 807 consensus_9255#3 ------------------------------------------------------------ consensus_9255#2 ------------------------------------------------------------ consensus_9255#0 ATTTTTCTTTGCTCTCTATGGTTTATATTCAAATTTTTCTCTACTGATAGATTAATATCA 891 consensus_9255#1 TTCACAGGAAGATGTTTGTAGAACTTA--TTGATTTGGGTAATATTTATTC----GTCGA 861 consensus_9255#3 --------AAGATGTTTGTAGAACTTA--TTGATTTGGGTAATATTTATTG----GTCGA 383 consensus_9255#2 --------AAGATGTTTGTAGAACTTA--TTGATTTGGGTAATATTTATTC----GTCGA 832 consensus_9255#0 CTTTTGAACAGCTCTACTAAACAATTAATTTAATTTGTGTGAATTTTATGTTGGTGTCAA 951 ** * * * * *** ** ***** ** * ***** *** * consensus_9255#1 TGTCAACCATTTCTTGTCCACAATGAA------TGGTTGATCGTATTC--------AAGA 907 consensus_9255#3 TGTCAACCATTTCTTGTCCACAATGAA------TGGTTGATTGTATTC--------AAGA 429 consensus_9255#2 TGTCAACCATTTCTTGTCCACAATGAA------TGGTTGATCGTATTC--------AAGA 878 consensus_9255#0 AATTTGGCACTTTAAGACCTTGGCATAGCAATTTCATTCTTTGTATCCCCTGCTCTAAGT 1011 * ** ** * ** * * ** * **** * *** consensus_9255#1 TGACAAAGCCATA-TTTA--TGCTTCATAGTT--------TGA-----GACTACTATATG 951 consensus_9255#3 TGACAAAGCCATA-TTTA--TGCTTCATAGTT--------TGA-----GACTACTATATG 473 consensus_9255#2 TGACAAAGCCATA-TTTA--TGCTTCATAGTT--------TGA-----GACTACTATATG 922 consensus_9255#0 TGGTATCATTTCAGTTTACTTGCTTTATAATTACTAAACTTGAAGGTCGACATGCACTTC 1071 ** * * **** ***** *** ** *** *** * * consensus_9255#1 GTGAGAGAAATTTATGTATGCCTACAAG-------AGTGCCTTG-TATGATTTTTGAAAG 1003 consensus_9255#3 GTGAGAGAAATTTATGTATGCCTACAAG-------AGTGCCTTG-TATGATTTTTGAAAG 525 consensus_9255#2 GAAAAAACAAAGCA-ATCTGAACGCAAC-------ACAGATTCAACAGGATGATCCAATG 974 consensus_9255#0 ACTGGGAAATTTTAAGTGAAACCCTGAATCCCTCAAATCTCCTATTGAACTTTATCATGA 1131 * * * * * * * consensus_9255#1 ATCACCAAAATGG---ATTTTCCT----------CAAAAGATTCTTCTGTACTTCAAATG 1050 consensus_9255#3 ATCACCAAAATGG---ATTTTCCT----------CAAAAGATTCTTCTGTACTTCAAATG 572 consensus_9255#2 ACAACAGTGAACA---CTATGGGT----------TAAGGTATCCAAACATAG--CATATG 1019 consensus_9255#0 ATTGCTAAAGTTGCTGATTTTCTTGAGTAGGAACCAAGCTATTCACTTAAAATTCATGTA 1191 * * * * * ** ** * * ** * consensus_9255#1 CTACGTGTACAAAGTTCGCATAT-AATGA-------ACTAGAAAAAAA-----ATGCAGG 1097 consensus_9255#3 CTACGTGTACAAAGTTCGCATAT-AATGA-------ACTAGAAAAAAA-----ATGCAGG 619 consensus_9255#2 CTTTCATCACCTACTGCAAACATCAGTCA-------CCTTTTACACCAGCTGTATGCAGG 1072 consensus_9255#0 CTAGCCTCTCAAAATTTGTATGAATATTGGGGTTTTATTTTAAGAGCAAATTAGATCAGA 1251 ** * * * * * * * * * *** consensus_9255#1 TGGCTATGTCTAGCTAT------TACTATAGA--CCACTGCCTAAC--AACATCCTTATC 1147 consensus_9255#3 TGGCTATGTCTAGCTAT------TACTATAAA--AAAA-----AAA--AA---------- 654 consensus_9255#2 TGG-TGCGCCAAGCCGC------CAAGGGCGC--GCGCCCCAGATCCTAGTATCCTTCAA 1123 consensus_9255#0 GTTCAGAGTCTACTCATGCTGCTTGCTGTTGGGTATACCTCCCAGGGAAGGGATGCTCTT 1311 * * * * * consensus_9255#1 GTACTTATCCGCAATTTTCATTGAGCCTATGCCCAATCAACCGTGCTTTTTATAAACATA 1207 consensus_9255#3 ------------------------------------------------------------ consensus_9255#2 CTTCAAGATGAAAGACGTAAATGAACCCATGTATGAACATGCCTACATCTAATAGGCATC 1183 consensus_9255#0 ATCCATCTTCCAGGAAATTGGTGGTAGCTGATTTCAAATGCGAAATTAGTTATTATTGTT 1371 consensus_9255#1 GGAAGTATTACTGTTGCTTTCTTGCCCTATACATCTCTTGCATACCACCCTTGAGAGTTT 1267 consensus_9255#3 ------------------------------------------------------------ consensus_9255#2 CAACTATGCAAGGAAAGCCTA--------------------------------------- 1204 consensus_9255#0 TCTGTTCTAATAGAAATTGATTTCACCGAGTCAATAACTTGCCATATTTATTTATTTACT 1431 consensus_9255#1 CTGAGAATATTTGCAAAAAAATATTGATTAACCTTGCCATTAGCAGGAAAAAACAAAGCA 1327 consensus_9255#3 ------------------------------------------------------------ consensus_9255#2 ------------------------------------------------------------ consensus_9255#0 CTTAAATTCCATTCTTATGAATGATTTGACAAACAATTTTTTCCTTGTCACAGAACAAGC 1491 consensus_9255#1 ATCTGAACGCAACACAGATTCAACAGGATGATCCAATGACAACAGTGAACACTATGGGTT 1387 consensus_9255#3 ------------------------------------------------------------ consensus_9255#2 ------------------------------------------------------------ consensus_9255#0 ATGTAAACGTGTTTGTTTACACAATACATGAAACAATATGTAGAATCATACTTTACACTG 1551 consensus_9255#1 AAGGTATCCAAACATAGCATATGCTTTCATCACCTACTGCAAACATCAGTCACCTTTTAC 1447 consensus_9255#3 ------------------------------------------------------------ consensus_9255#2 ------------------------------------------------------------ consensus_9255#0 CCATTTTCTCCAAAGAGGCTGTGATAAGCACTTCTGCATCCACTTGAACTCATATATACT 1611 consensus_9255#1 ACCAGCTGTATGCAGGTGGTGCGCCAAGCCGCCAAGGGCGCGCGCCCCAGATCCTAGTAT 1507 consensus_9255#3 ------------------------------------------------------------ consensus_9255#2 ------------------------------------------------------------ consensus_9255#0 TGTGTGCCCTTTAATTTTGTAGGATAATTATATGAAAGAAGCCCCTCTATATCTGGAGTT 1671 consensus_9255#1 CCTTCAACTTCAAGATGAAAGACGTAAATGAACCCATGTATGA-ACATGCCTACATCTAA 1566 consensus_9255#3 ------------------------------------------------------------ consensus_9255#2 ------------------------------------------------------------ consensus_9255#0 AGGGAGCACATTTTTACTAGCAGGATTGTAGTTTTGTGACTAATAAGCAACAGCTGCTTG 1731 consensus_9255#1 TAGGCATCCAACTATGCAAGGAAAGCCTATTTAGCCTCCATTAACTCTTGCTTTTGATTG 1626 consensus_9255#3 ------------------------------------------------------------ consensus_9255#2 ------------------------------------------------------------ consensus_9255#0 CAGACCCTCTGAAGTGAGATGTTTACCTATCTCACTATTTCACCCTCACATGTTTGTTAT 1791 consensus_9255#1 AATAGTATCTCTCAACTCCAAAACGGGGTATAACGTCTACCCATC--------------- 1671 consensus_9255#3 ------------------------------------------------------------ consensus_9255#2 ------------------------------------------------------------ consensus_9255#0 ACAATTGAATGGATATGCATATTTTTTTAATAATATTTATTCAAATAGAGTTATCAACCA 1851 consensus_9255#1 ------------------------------------------------------------ consensus_9255#3 ------------------------------------------------------------ consensus_9255#2 ------------------------------------------------------------ consensus_9255#0 CAAGAAAAAGCTAAGCAAGCATATCTTATGTTAATGTTCTTGTGTAGATTTGAAATATCA 1911 consensus_9255#1 ------------------------------------------------------------ consensus_9255#3 ------------------------------------------------------------ consensus_9255#2 ------------------------------------------------------------ consensus_9255#0 TGTGATGAACAAGGTCATTTCATTTGTTGCCTTATAAACATATTAAGCAGACCATTTTAA 1971 consensus_9255#1 ------------------------------------------------------------ consensus_9255#3 ------------------------------------------------------------ consensus_9255#2 ------------------------------------------------------------ consensus_9255#0 AGTGCACTTTCACACTACTCTTTTATATGTTGTATGCTTTTGCAGCTCTACATAAGAATT 2031 consensus_9255#1 ---------------- consensus_9255#3 ---------------- consensus_9255#2 ---------------- consensus_9255#0 TTATAATAAAAAATAC 2047 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||