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Oryza sativa
cluster # 9335 cluster # 9335       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9335#0 length = 1877 sequences # 4  
consensus_9335#1 length = 415 sequences # 1  
consensus_9335#2 length = 276 sequences # 1  

consensusID : consensus_9335#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1877
fasta sequence
                              [TCCTCTTCCTCCGCTCCCCAATCTGGTCTCGCCCTTCGCCGCGCGAGAGGAGAGAGAGAGAGAGAGAGCTCGCTCGCGCGCGCGAAGAATCGACGAGGAGGAGGAGGAGGAAGGGGAGAGGGGGAGAGGCGCCATGGGGAAGAACCAGGCGTACAAGGCGATGCAGCGGGCGCGGCTGGGCTCCTCGTCCGGCGCCCCGGGCGCCACCGACTCCCCCGAAGACGGCATGAGTGGCATGCGGCGCGGTTGGCCAGCCTGAACAAGACGCACACCGTCACGTGGGAGGAGTTCAAGAAGAAGCAGAAGGTACACAAGTCCATCGCTTTGCTCGGTTTACTACTGTTAGCTTTGATCAGCTGGTTTATATTCTCTAGTTCTCCTTTTGTGTGCGCAAACCCGCGGACCATGGTAGTGCAAGATGTCCTCTTGTTGCTCCTACCATGTTGTAGTGTTGGTGATACTGATTGTTCATTTTCTGTGTGTTGATGCGCTGTATGATGGTCTGATGCAGGATGGTCGTTAGATAATGAAAGATATGATTAGTTGTTCTCTCCCAGATAACACTCTTAATGTGATGAGTAAATTTCATTGTATCCTTGTATGTATCTGCTAGTTGAATTTGGAACGCCGATTTTACCTTTCCTAGCACATGTAGCAGCGAATAAATTTCTGAATTGTATAATATTGGAGGATTTATCAACCTGAACCTCTGTAGCTCATTCAAGAAGCTTATTCTTGCCCCCCGTCAATGCATTAACAAAGTGCATAGACTTTGTAGTTGTGGTTTACTGTTACAAACTTGAGCTAACATTTGGAGCAGAATAGTTGGAGCACATGGTGTTACATGATCAGTTTTGTACTCATAAACCATCTCTAGGGAGCTTTCATATTTCCGTCTTATACTTGATTTGGTTCCTCGGCTAATGATATCAAATTGCATCTCTTTTATGTTTATTGGCCGTCAGGTGGTTATGGATGGCGCTTGCACTAATTCCGAAAGTCCAACCTATACCTTTCTGACATTGCTCAGGAATCAGGATTATTTTTTACAAATGAATTGTGGTTTTCTGCATGAACCCCCACAATGTTGCAGCACATAATCCTAAGCCTTCTTGTACTTATGCAGAGATTGATTTGTGACTACAGCTGTTTATTATCAATACTTGTACAGTAGCTCATGCTGCTCTTTGGCTCTTTGCCCTAATAGGAAGACGAGTTAAAGAGGGGTGAAATGGAAGCTGACAAAGATAAAATGATGAGAGAATATAGGGCTCAACTGGATGCTGAAAGGGCACAAAAGCTAGCTCTTGGAAGAAACCACTCAAGGTCAAAGTCATCATCTTCTAAGAAAGAGAAGAAGGATAAAGATGCAAAGAAACGGAGTAAAAAGAGGAGAAAGCATAGAAGTTCATCAGAGTCAAGTTCCAGTTCATCGTCGGAATCATCAAGCAGTGATGATGAGGATAGGGATTCGAGAAAGTCCAGGTCACGGTCCAGATCGAAGAGGACAAAAAAGGATAAGAAGTACAGGTCAAGATCCAAGCACAGGGGCAGTGATAGTGAGGAGGAAGGACCTGTGCGGCTCTCTAAATTCTTTGGGAACCCAAAGAAATAGATGAATACCGGGAGGCCTGCAGCCAGAAGACCTCGTCGCATAATCTCTCTTGAGCTATGAATTGATGGTTGTAGACTGTATCATTAAGCTCTAATTACTGTGTTAAGGTGGGAAAAAACCGATTACTGTATTACATCTCAAGAATGTTAAATCAATTTGACGGTGCGGCATTTGAATATGAATTCATTGTAACATAGTAGTACGTGACAAGGGAGATATGCTGGCACTTAATAGCATCAAAAGTTTTTATTTGAAAAAAAAA]

[+] EMBL AK065058             [TCCTCTTCCTCCGCTCCCCAATCTGGTCTCGCCCTTCGCCGCGCGAGAGGAGAGAGAGAGAGAGAGAGCTCGCTCGCGCGCGCGAAGAATCGACGAGGAGGAGGAGGAGGAAGGGGAGAGGGGGAGAGGCGCCATGGGGAAGAACCAGGCGTACAAGGCGATGCAGCGGGCGCGGCTGGGCTCCTCGTCCGGCGCCCCGGGCGCCACCGACTCCCCCGAAGACGGCATGAGTGGCATGCGGCGCGGTTGGCCAGCCTGAACAAGACGCACACCGTCACGTGGGAGGAGTTCAAGAAGAAGCAGAAGGTACACAAGTCCATCGCTTTGCTCGGTTTACTACTGTTAGCTTTGATCAGCTGGTTTATATTCTCTAGTTCTCCTTTTGTGTGCGCAAACCCGCGGACCATGGTAGTGCAAGATGTCCTCTTGTTGCTCCTACCATGTTGTAGTGTTGGTGATACTGATTGTTCATTTTCTGTGTGTTGATGCGCTGTATGATGGTCTGATGCAGGATGGTCGTTAGATAATGAAAGATATGATTAGTTGTTCTCTCCCAGATAACACTCTTAATGTGATGAGTAAATTTCATTGTATCCTTGTATGTATCTGCTAGTTGAATTTGGAACGCCGATTTTACCTTTCCTAGCACATGTAGCAGCGAATAAATTTCTGAATTGTATAATATTGGAGGATTTATCAACCTGAACCTCTGTAGCTCATTCAAGAAGCTTATTCTTGCCCCCCGTCAATGCATTAACAAAGTGCATAGACTTTGTAGTTGTGGTTTACTGTTACAAACTTGAGCTAACATTTGGAGCAGAATAGTTGGAGCACATGGTGTTACATGATCAGTTTTGTACTCATAAACCATCTCTAGGGAGCTTTCATATTTCCGTCTTATACTTGATTTGGTTCCTCGGCTAATGATATCAAATTGCATCTCTTTTATGTTTATTGGCCGTCAGGTGGTTATGGATGGCGCTTGCACTAATTCCGAAAGTCCAACCTATACCTTTCTGACATTGCTCAGGAATCAGGATTATTTTTTACAAATGAATTGTGGTTTTCTGCATGAACCCCCACAATGTTGCAGCACATAATCCTAAGCCTTCTTGTACTTATGCAGAGATTGATTTGTGACTACAGCTGTTTATTATCAATACTTGTACAGTAGCTCATGCTGCTCTTTGGCTCTTTGCCCTAATAGGAAGACGAGTTAAAGAGGGGTGAAATGGAAGCTGACAAAGATAAAATGATGAGAGAATATAGGGCTCAACTGGATGCTGAAAGGGCACAAAAGCTAGCTCTTGGAAGAAACCACTCAAGGTCAAAGTCATCATCTTCTAAGAAAGAGAAGAAGGATAAAGATGCAAAGAAACGGAGTAAAAAGAGGAGAAAGCATAGAAGTTCATCAGAGTCAAGTTCCAGTTCATCGTCGGAATCATCAAGCAGTGATGATGAGGATAGGGATTCGAGAAAGTCCAGGTCACGGTCCAGATCGAAGAGGACAAAAAAGGATAAGAAGTACAGGTCAAGATCCAAGCACAGGGGCAGTGATAGTGAGGAGGAAGGACCTGTGCGGCTCTCTAAATTCTTTGGGAACCCAAAGAAATAGATGAATACCGGGAGGCCTGCAGCCAGAAGACCTCGTCGCATAATCTCTCTTGAGCTATGAATTGATGGTTGTAGACTGTATCATTAAGCTCTAATTACTGTGTTAAGGTGGGAAAAAACCGATTACTGTATTACATCTCAAGAATGTTAAATCAATTTGACGGTGCGGCATTTGAATATGAATTCATTGTAACATAGTAGTACGTGACAAGGGAGATATGCTGGC                                     ]
[+] EMBL CB648599             [                                                                                                                                                                                                                                         GCATGCGGCGCGGTTGGCCAGCCTGAACAAGACGCACACCGTCACGTGGGAGGAGTTCAAGAAGAAGCAGAAGGTACACAAGTCCATCGCTTTGCTCGGTTTACTACTGTTAGCTTTGATCAGCTGGTTTATATTCTCTAGTTCTCCTTTTGTGTGCGCAAACCCGCGGACCATGGTAGTGCAAGATGTCCTCTTGTTGCTCCTACCATGTTGTAGTGTTGGTGATACTGATTGTTCATTTTCTGTGTGTTGATGCGCTGTATGATGGTCTGATGCAGGATGGTCGTTAGATAATGAAAGATATGATTAGTTGTTCTCTCCCAGATAACACTCTTAATGTGATGAGTAAATTTCATTGTATCCTTGTATGTATCTGCTAGTTGAATTTGGAACGCCGATTTTACCTTTCCTAGCACATGTAGCAGCGAATAAATTTCTGAATTGTATAATATTGGAAGATTTATCAACCTGAACCTCTGTAGCTCATTCAAGAAGCTTATTCTTGCCCCCCGTCAATGCATTAACAAAGTGCATAGACTTTGTAGTTGTGGTTTACTGTTACAAACTTGAGCTAACATTTGGAGCAGAAGAGTTGGAGCACATGGTGTTACATGATCAGTTTTGTACTCATAAACCATCTCTAGGGAGCTTTCATATTTCCGTCTTATACTTGATTTGGTTCCTCGGCTAATGATATCAAATTGCATCTCTTTTATGTTTATTGGCCGTCAGGTGGTTATGGATGGCGCTTGCACTAATTCCGAAAGTCCAACCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AT003746             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAGAAGTACAGGTCAAGATCCAAGCACAGGGGCAGTGATAGTGAGGAGGAAGGACCTGTGCGGCTCTCTAAATTCTTTGGGAACCCAAAGAAATAGATGAATNCCGGGAGGCCTNCAGCCANAAGACCTCGTCGCATAATCTCTCTTGAGCTATGAATTGATGGTTGTAGACTGTATCATTAAGCTCTAATTACTGTGTTAAGGTGGGAAAAAACCGATTACTGTATTACATCTCAAGAATGTTAAATCAATTTGACGGTGCGGCATTTGAATATGAATTCATTGTAACATAGTAGTCCGTGNCAAGGGAGATATGCTGGCACTTAATAGCATCAAAAGTTTTTATTTGAAAAAAAA ]
[+] EMBL AT003671             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGGTCAAGATCCAAGCACAGGGGCAGTGATAGTGAGGAGGAAGGACCTGTGCGGCTCTCTAAATTCTTTGGGAACCCAAAGAAATAGATGAATACCGGGAGGCCTGCAGCCAGAAGACCTCGTCGCATAATCTCTCTTGAGCTATGAATTGATGGTTGTAGACTGTATCATTAAGCTCTAATTACTGTGTTAAGGTGGGAAAAAACCGATTACTGTATTACATCTCAAGAATGTTAAATCAATTTGACGGTGCGGCATTTGAATATGAATTCATTGTAACATAGTAGTACGTGACAAGGGAGATATGCTGGCACTTAATAGCATCAAAAGTTTTTATTTGAAAAAAAAA]


>consensus_9335#0 TCCTCTTCCTCCGCTCCCCAATCTGGTCTCGCCCTTCGCCGCGCGAGAGGAGAGAGAGAG AGAGAGAGCTCGCTCGCGCGCGCGAAGAATCGACGAGGAGGAGGAGGAGGAAGGGGAGAG GGGGAGAGGCGCCATGGGGAAGAACCAGGCGTACAAGGCGATGCAGCGGGCGCGGCTGGG CTCCTCGTCCGGCGCCCCGGGCGCCACCGACTCCCCCGAAGACGGCATGAGTGGCATGCG GCGCGGTTGGCCAGCCTGAACAAGACGCACACCGTCACGTGGGAGGAGTTCAAGAAGAAG CAGAAGGTACACAAGTCCATCGCTTTGCTCGGTTTACTACTGTTAGCTTTGATCAGCTGG TTTATATTCTCTAGTTCTCCTTTTGTGTGCGCAAACCCGCGGACCATGGTAGTGCAAGAT GTCCTCTTGTTGCTCCTACCATGTTGTAGTGTTGGTGATACTGATTGTTCATTTTCTGTG TGTTGATGCGCTGTATGATGGTCTGATGCAGGATGGTCGTTAGATAATGAAAGATATGAT TAGTTGTTCTCTCCCAGATAACACTCTTAATGTGATGAGTAAATTTCATTGTATCCTTGT ATGTATCTGCTAGTTGAATTTGGAACGCCGATTTTACCTTTCCTAGCACATGTAGCAGCG AATAAATTTCTGAATTGTATAATATTGGAGGATTTATCAACCTGAACCTCTGTAGCTCAT TCAAGAAGCTTATTCTTGCCCCCCGTCAATGCATTAACAAAGTGCATAGACTTTGTAGTT GTGGTTTACTGTTACAAACTTGAGCTAACATTTGGAGCAGAATAGTTGGAGCACATGGTG TTACATGATCAGTTTTGTACTCATAAACCATCTCTAGGGAGCTTTCATATTTCCGTCTTA TACTTGATTTGGTTCCTCGGCTAATGATATCAAATTGCATCTCTTTTATGTTTATTGGCC GTCAGGTGGTTATGGATGGCGCTTGCACTAATTCCGAAAGTCCAACCTATACCTTTCTGA CATTGCTCAGGAATCAGGATTATTTTTTACAAATGAATTGTGGTTTTCTGCATGAACCCC CACAATGTTGCAGCACATAATCCTAAGCCTTCTTGTACTTATGCAGAGATTGATTTGTGA CTACAGCTGTTTATTATCAATACTTGTACAGTAGCTCATGCTGCTCTTTGGCTCTTTGCC CTAATAGGAAGACGAGTTAAAGAGGGGTGAAATGGAAGCTGACAAAGATAAAATGATGAG AGAATATAGGGCTCAACTGGATGCTGAAAGGGCACAAAAGCTAGCTCTTGGAAGAAACCA CTCAAGGTCAAAGTCATCATCTTCTAAGAAAGAGAAGAAGGATAAAGATGCAAAGAAACG GAGTAAAAAGAGGAGAAAGCATAGAAGTTCATCAGAGTCAAGTTCCAGTTCATCGTCGGA ATCATCAAGCAGTGATGATGAGGATAGGGATTCGAGAAAGTCCAGGTCACGGTCCAGATC GAAGAGGACAAAAAAGGATAAGAAGTACAGGTCAAGATCCAAGCACAGGGGCAGTGATAG TGAGGAGGAAGGACCTGTGCGGCTCTCTAAATTCTTTGGGAACCCAAAGAAATAGATGAA TACCGGGAGGCCTGCAGCCAGAAGACCTCGTCGCATAATCTCTCTTGAGCTATGAATTGA TGGTTGTAGACTGTATCATTAAGCTCTAATTACTGTGTTAAGGTGGGAAAAAACCGATTA CTGTATTACATCTCAAGAATGTTAAATCAATTTGACGGTGCGGCATTTGAATATGAATTC ATTGTAACATAGTAGTACGTGACAAGGGAGATATGCTGGCACTTAATAGCATCAAAAGTT TTTATTTGAAAAAAAAA



consensusID : consensus_9335#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 415
fasta sequence
                              [ANAAACTAAGGGNGGATTCCCCCCCCGGGNTGCCANGAATTTNGGGCCCGANAAANAAGTACCAGGTTCAAGATCCCAAAGCCCAGGGGCAGTGATAGTGAGGAGGAAGGACCTGTGCGGCTCTCTAAATTCTTTGGGAACCCAAAGAAATAGATGAATACCGGGAGGCCTGCAGCCAGAAGACCTCGTCGCATAATCTCTCTTGAGCTATGAATTGATGGTTGTAGACTGTATCATTAAGCTCTAATTACTGTGTTAAGGTGGGAAAAAACCGATTACTGTATTACATCTCAAGAATGTTAAATCAATTTGACGGTGCGGCATTTGAATATGAATTCATTGTAACATAGTAGTACGTGACAAGGGAGATATGCTGGCNCTTAATAGCNTCAAAAGTNTTTATTTGAAAAAAAAA]

[+] EMBL AT003598             [ANAAACTAAGGGNGGATTCCCCCCCCGGGNTGCCANGAATTTNGGGCCCGANAAANAAGTACCAGGTTCAAGATCCCAAAGCCCAGGGGCAGTGATAGTGAGGAGGAAGGACCTGTGCGGCTCTCTAAATTCTTTGGGAACCCAAAGAAATAGATGAATACCGGGAGGCCTGCAGCCAGAAGACCTCGTCGCATAATCTCTCTTGAGCTATGAATTGATGGTTGTAGACTGTATCATTAAGCTCTAATTACTGTGTTAAGGTGGGAAAAAACCGATTACTGTATTACATCTCAAGAATGTTAAATCAATTTGACGGTGCGGCATTTGAATATGAATTCATTGTAACATAGTAGTACGTGACAAGGGAGATATGCTGGCNCTTAATAGCNTCAAAAGTNTTTATTTGAAAAAAAAA]


>consensus_9335#1 ANAAACTAAGGGNGGATTCCCCCCCCGGGNTGCCANGAATTTNGGGCCCGANAAANAAGT ACCAGGTTCAAGATCCCAAAGCCCAGGGGCAGTGATAGTGAGGAGGAAGGACCTGTGCGG CTCTCTAAATTCTTTGGGAACCCAAAGAAATAGATGAATACCGGGAGGCCTGCAGCCAGA AGACCTCGTCGCATAATCTCTCTTGAGCTATGAATTGATGGTTGTAGACTGTATCATTAA GCTCTAATTACTGTGTTAAGGTGGGAAAAAACCGATTACTGTATTACATCTCAAGAATGT TAAATCAATTTGACGGTGCGGCATTTGAATATGAATTCATTGTAACATAGTAGTACGTGA CAAGGGAGATATGCTGGCNCTTAATAGCNTCAAAAGTNTTTATTTGAAAAAAAAA



consensusID : consensus_9335#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 276
fasta sequence
                              [AGCACAGGGGCAGTGATAGTGAGGAGGAAGGACCTGTGCGGCTCTCTAAATTCTTTGGGAACCCAAAGAAATAGATGAATACCGGGAGGCCTGCAGCCAGAAGACCTCGTCGCATAATCTCTCTTGAGCTATGAATTGATGGTTGTAGACTGTATCATTAAGCTCTAATTACTGTGTTAAGGTGGGAAAAAACCGATTACTGTATTACATCTCAAGAATGTTAAATCAATTTGACGGTGCGGCATTTGAACAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CA882822             [AGCACAGGGGCAGTGATAGTGAGGAGGAAGGACCTGTGCGGCTCTCTAAATTCTTTGGGAACCCAAAGAAATAGATGAATACCGGGAGGCCTGCAGCCAGAAGACCTCGTCGCATAATCTCTCTTGAGCTATGAATTGATGGTTGTAGACTGTATCATTAAGCTCTAATTACTGTGTTAAGGTGGGAAAAAACCGATTACTGTATTACATCTCAAGAATGTTAAATCAATTTGACGGTGCGGCATTTGAACAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_9335#2 AGCACAGGGGCAGTGATAGTGAGGAGGAAGGACCTGTGCGGCTCTCTAAATTCTTTGGGA ACCCAAAGAAATAGATGAATACCGGGAGGCCTGCAGCCAGAAGACCTCGTCGCATAATCT CTCTTGAGCTATGAATTGATGGTTGTAGACTGTATCATTAAGCTCTAATTACTGTGTTAA GGTGGGAAAAAACCGATTACTGTATTACATCTCAAGAATGTTAAATCAATTTGACGGTGC GGCATTTGAACAAAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9335#0      TCCTCTTCCTCCGCTCCCCAATCTGGTCTCGCCCTTCGCCGCGCGAGAGGAGAGAGAGAG 60
consensus_9335#2      ------------------------------------------------------------
consensus_9335#1      ------------------------------------------------------------
                                                                                  

consensus_9335#0      AGAGAGAGCTCGCTCGCGCGCGCGAAGAATCGACGAGGAGGAGGAGGAGGAAGGGGAGAG 120
consensus_9335#2      ------------------------------------------------------------
consensus_9335#1      ------------------------------------------------------------
                                                                                  

consensus_9335#0      GGGGAGAGGCGCCATGGGGAAGAACCAGGCGTACAAGGCGATGCAGCGGGCGCGGCTGGG 180
consensus_9335#2      ------------------------------------------------------------
consensus_9335#1      ------------------------------------------------------------
                                                                                  

consensus_9335#0      CTCCTCGTCCGGCGCCCCGGGCGCCACCGACTCCCCCGAAGACGGCATGAGTGGCATGCG 240
consensus_9335#2      ------------------------------------------------------------
consensus_9335#1      ------------------------------------------------------------
                                                                                  

consensus_9335#0      GCGCGGTTGGCCAGCCTGAACAAGACGCACACCGTCACGTGGGAGGAGTTCAAGAAGAAG 300
consensus_9335#2      ------------------------------------------------------------
consensus_9335#1      ------------------------------------------------------------
                                                                                  

consensus_9335#0      CAGAAGGTACACAAGTCCATCGCTTTGCTCGGTTTACTACTGTTAGCTTTGATCAGCTGG 360
consensus_9335#2      ------------------------------------------------------------
consensus_9335#1      ------------------------------------------------------------
                                                                                  

consensus_9335#0      TTTATATTCTCTAGTTCTCCTTTTGTGTGCGCAAACCCGCGGACCATGGTAGTGCAAGAT 420
consensus_9335#2      ------------------------------------------------------------
consensus_9335#1      ------------------------------------------------------------
                                                                                  

consensus_9335#0      GTCCTCTTGTTGCTCCTACCATGTTGTAGTGTTGGTGATACTGATTGTTCATTTTCTGTG 480
consensus_9335#2      ------------------------------------------------------------
consensus_9335#1      ------------------------------------------------------------
                                                                                  

consensus_9335#0      TGTTGATGCGCTGTATGATGGTCTGATGCAGGATGGTCGTTAGATAATGAAAGATATGAT 540
consensus_9335#2      ------------------------------------------------------------
consensus_9335#1      ------------------------------------------------------------
                                                                                  

consensus_9335#0      TAGTTGTTCTCTCCCAGATAACACTCTTAATGTGATGAGTAAATTTCATTGTATCCTTGT 600
consensus_9335#2      ------------------------------------------------------------
consensus_9335#1      ------------------------------------------------------------
                                                                                  

consensus_9335#0      ATGTATCTGCTAGTTGAATTTGGAACGCCGATTTTACCTTTCCTAGCACATGTAGCAGCG 660
consensus_9335#2      ------------------------------------------------------------
consensus_9335#1      ------------------------------------------------------------
                                                                                  

consensus_9335#0      AATAAATTTCTGAATTGTATAATATTGGAGGATTTATCAACCTGAACCTCTGTAGCTCAT 720
consensus_9335#2      ------------------------------------------------------------
consensus_9335#1      ------------------------------------------------------------
                                                                                  

consensus_9335#0      TCAAGAAGCTTATTCTTGCCCCCCGTCAATGCATTAACAAAGTGCATAGACTTTGTAGTT 780
consensus_9335#2      ------------------------------------------------------------
consensus_9335#1      ------------------------------------------------------------
                                                                                  

consensus_9335#0      GTGGTTTACTGTTACAAACTTGAGCTAACATTTGGAGCAGAATAGTTGGAGCACATGGTG 840
consensus_9335#2      ------------------------------------------------------------
consensus_9335#1      ------------------------------------------------------------
                                                                                  

consensus_9335#0      TTACATGATCAGTTTTGTACTCATAAACCATCTCTAGGGAGCTTTCATATTTCCGTCTTA 900
consensus_9335#2      ------------------------------------------------------------
consensus_9335#1      ------------------------------------------------------------
                                                                                  

consensus_9335#0      TACTTGATTTGGTTCCTCGGCTAATGATATCAAATTGCATCTCTTTTATGTTTATTGGCC 960
consensus_9335#2      ------------------------------------------------------------
consensus_9335#1      ------------------------------------------------------------
                                                                                  

consensus_9335#0      GTCAGGTGGTTATGGATGGCGCTTGCACTAATTCCGAAAGTCCAACCTATACCTTTCTGA 1020
consensus_9335#2      ------------------------------------------------------------
consensus_9335#1      ------------------------------------------------------------
                                                                                  

consensus_9335#0      CATTGCTCAGGAATCAGGATTATTTTTTACAAATGAATTGTGGTTTTCTGCATGAACCCC 1080
consensus_9335#2      ------------------------------------------------------------
consensus_9335#1      ------------------------------------------------------------
                                                                                  

consensus_9335#0      CACAATGTTGCAGCACATAATCCTAAGCCTTCTTGTACTTATGCAGAGATTGATTTGTGA 1140
consensus_9335#2      ------------------------------------------------------------
consensus_9335#1      ------------------------------------------------------------
                                                                                  

consensus_9335#0      CTACAGCTGTTTATTATCAATACTTGTACAGTAGCTCATGCTGCTCTTTGGCTCTTTGCC 1200
consensus_9335#2      ------------------------------------------------------------
consensus_9335#1      ------------------------------------------------------------
                                                                                  

consensus_9335#0      CTAATAGGAAGACGAGTTAAAGAGGGGTGAAATGGAAGCTGACAAAGATAAAATGATGAG 1260
consensus_9335#2      ------------------------------------------------------------
consensus_9335#1      ------------------------------------------------------------
                                                                                  

consensus_9335#0      AGAATATAGGGCTCAACTGGATGCTGAAAGGGCACAAAAGCTAGCTCTTGGAAGAAACCA 1320
consensus_9335#2      ------------------------------------------------------------
consensus_9335#1      ------------------------------------------------------------
                                                                                  

consensus_9335#0      CTCAAGGTCAAAGTCATCATCTTCTAAGAAAGAGAAGAAGGATAAAGATGCAAAGAAACG 1380
consensus_9335#2      ------------------------------------------------------------
consensus_9335#1      ------------------------------------------------------------
                                                                                  

consensus_9335#0      GAGTAAAAAGAGGAGAAAGCATAGAAGTTCATCAGAGTCAAGTTCCAGTTCATCGTCGGA 1440
consensus_9335#2      ------------------------------------------------------------
consensus_9335#1      ------------------------------------------------------------
                                                                                  

consensus_9335#0      ATCATCAAGCAGTGATGATGAGGATAGGGATTCGAGAAAGTCCAGGTCACGGTCCAGATC 1500
consensus_9335#2      ------------------------------------------------------------
consensus_9335#1      --------------ANAAACTAAGGGNGGATTCCCC---CCCCGGGNTGCCANGAATTTN 43
                                                                                  

consensus_9335#0      GAAGAGGACAAAAAAGGATAAGAAGTACAGGTCAAGATCC--AAGCACAGGGGCAGTGAT 1558
consensus_9335#2      -------------------------------------------AGCACAGGGGCAGTGAT 17
consensus_9335#1      GGGCCCGANAAANAAGTACCAG-------GTTCAAGATCCCAAAGCCCAGGGGCAGTGAT 96
                                                                 *** *************

consensus_9335#0      AGTGAGGAGGAAGGACCTGTGCGGCTCTCTAAATTCTTTGGGAACCCAAAGAAATAGATG 1618
consensus_9335#2      AGTGAGGAGGAAGGACCTGTGCGGCTCTCTAAATTCTTTGGGAACCCAAAGAAATAGATG 77
consensus_9335#1      AGTGAGGAGGAAGGACCTGTGCGGCTCTCTAAATTCTTTGGGAACCCAAAGAAATAGATG 156
                      ************************************************************

consensus_9335#0      AATACCGGGAGGCCTGCAGCCAGAAGACCTCGTCGCATAATCTCTCTTGAGCTATGAATT 1678
consensus_9335#2      AATACCGGGAGGCCTGCAGCCAGAAGACCTCGTCGCATAATCTCTCTTGAGCTATGAATT 137
consensus_9335#1      AATACCGGGAGGCCTGCAGCCAGAAGACCTCGTCGCATAATCTCTCTTGAGCTATGAATT 216
                      ************************************************************

consensus_9335#0      GATGGTTGTAGACTGTATCATTAAGCTCTAATTACTGTGTTAAGGTGGGAAAAAACCGAT 1738
consensus_9335#2      GATGGTTGTAGACTGTATCATTAAGCTCTAATTACTGTGTTAAGGTGGGAAAAAACCGAT 197
consensus_9335#1      GATGGTTGTAGACTGTATCATTAAGCTCTAATTACTGTGTTAAGGTGGGAAAAAACCGAT 276
                      ************************************************************

consensus_9335#0      TACTGTATTACATCTCAAGAATGTTAAATCAATTTGACGGTGCGGCATTTGAATATGAAT 1798
consensus_9335#2      TACTGTATTACATCTCAAGAATGTTAAATCAATTTGACGGTGCGGCATTTGAACAAAAAA 257
consensus_9335#1      TACTGTATTACATCTCAAGAATGTTAAATCAATTTGACGGTGCGGCATTTGAATATGAAT 336
                      ***************************************************** *  ** 

consensus_9335#0      TCATTGTAACATAGTAGTACGTGACAAGGGAGATATGCTGGCACTTAATAGCATCAAAAG 1858
consensus_9335#2      AAAAAAAAAAAAAAAAAAA----------------------------------------- 276
consensus_9335#1      TCATTGTAACATAGTAGTACGTGACAAGGGAGATATGCTGGCNCTTAATAGCNTCAAAAG 396
                        *    ** * *  *  *                                         

consensus_9335#0      TTTTTATTTGAAAAAAAAA 1877
consensus_9335#2      -------------------
consensus_9335#1      TNTTTATTTGAAAAAAAAA 415
                                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)