These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9378#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1296 fasta sequence [ACAGTCGCAATCAGACATTCTCTCTTGTTGGTTAACTAAATAGCTTAATTAATTTGAGGAGTTTAGTCTCTGAAACATGGCGATGGCGACAGCAGCATGCAGAAGGCCTGCAGTGATGCTCATGGCGTTCGCCATGGCGGCTGCGGTGACGATGAGCTCCGTGCCGCCGGCGTCGGGGACGACGACGCTGCAGTACGACTTCTACTCGTCGTCGTGCCCGAAAGCCGAGGAGACGGTGAGGAACGTCGTCGAGCCGATGATCTTCAACGACCCCACCATGGGCGCCGCCTTCATCCGCCTCTTCTTCCACGACTGC-TTCGTCAGGGGTTGTGACGCGTCCATCCTGCTGGACCCGACGAGCAGAAACACGCAGCCGGAGAAGACGGCGATCCCGCTGCGCGGCTACGACGCCGTGAACAAGATCAAGGCCGCCGTCGAGGCCGTCTGCCCCGGCAAGGTCTCCTGCGCCGACATCCTCGCCTTCGCCGCGCGCGACTCCGCCGTCGTCAACGGCAACTTCGCCTTCGCCATGCCCTCCGGCCGCCGCGACGGCACCGCCTCCTCCGCCTCCGACGTCGCCCGGTTCATCCCGTCCCCGGCGTTCCACCTCCAGGACCTCGTCGACAGCTTCGCCGCCAAGGGCCTCACCGCCGACGACCTCGTCATCCTCTCCGGCGCCCACTCCTTCGGCCTCACCCACTGCGCCTTCGTCACCGGCAGGCTCTACCCCACCGTCGACCCCACCATGAACGCCACGTTCGCCGCGGCGCTCAAGAAGCTGTGCCCGCCGCCGGCGAGCGGCGGCGGCGGGAGGGCGGTGAGCAACAACCAGGTGACCGACCCCAACGTGCTGAGCAACCAGTACTTCAAGAACGTGGCCGCCGGGGAGGTGATGTTCACGTCGGACCAGACGCTGACGAGCCGCGACGACACCAAGGCGATGGTCGACGACAACGCCGCCAACCCGGTGGCGTGGATGGCGAGGTTCGCGGCGGCGATGGTGAAGATGGGCGGCGTCGAGGTGCTCACCGGGAACGCCGGCGAGGTCAGGAAGGTCTGCTTCGCCACCAACACGGCGAGCTGATAATTAAGCTACAAGTTCTCTTTCTCCAGCGATCGGCTGGATCATTACCACATAATATATATATTCCTTGTTATTTTGATCTCTTAATTTGTACTCCGTAGTTACCTGCATCGATTCTTGCTGTTGTAAAACTGAATTGTAATTCACTATCTTTGAATATTCAGTGATCAGTTACNGTGGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK109054 [ACAGTCGCAATCAGACATTCTCTCTTGTTGGTTAACTAAATAGCTTAATTAATTTGAGGAGTTTAGTCTCTGAAACATGGCGATGGCGACAGCAGCATGCAGAAGGCCTGCAGTGATGCTCATGGCGTTCGCCATGGCGGCTGCGGTGACGATGAGCTCCGTGCCGCCGGCGTCGGGGACGACGACGCTGCAGTACGACTTCTACTCGTCGTCGTGCCCGAAAGCCGAGGAGACGGTGAGGAACGTCGTCGAGCCGATGATCTTCAACGACCCCACCATGGGCGCCGCCTTCATCCGCCTCTTCTTCCACGACTGC TTCGTCAGGGGTTGTGACGCGTCCATCCTGCTGGACCCGACGAGCAGAAACACGCAGCCGGAGAAGACGGCGATCCCGCTGCGCGGCTACGACGCCGTGAACAAGATCAAGGCCGCCGTCGAGGCCGTCTGCCCCGGCAAGGTCTCCTGCGCCGACATCCTCGCCTTCGCCGCGCGCGACTCCGCCGTCGTCAACGGCAACTTCGCCTTCGCCATGCCCTCCGGCCGCCGCGACGGCACCGCCTCCTCCGCCTCCGACGTCGCCCGGTTCATCCCGTCCCCGGCGTTCCACCTCCAGGACCTCGTCGACAGCTTCGCCGCCAAGGGCCTCACCGCCGACGACCTCGTCATCCTCTCCGGCGCCCACTCCTTCGGCCTCACCCACTGCGCCTTCGTCACCGGCAGGCTCTACCCCACCGTCGACCCCACCATGAACGCCACGTTCGCCGCGGCGCTCAAGAAGCTGTGCCCGCCGCCGGCGAGCGGCGGCGGCGGGAGGGCGGTGAGCAACAACCAGGTGACCGACCCCAACGTGCTGAGCAACCAGTACTTCAAGAACGTGGCCGCCGGGGAGGTGATGTTCACGTCGGACCAGACGCTGACGAGCCGCGACGACACCAAGGCGATGGTCGACGACAACGCCGCCAACCCGGTGGCGTGGATGGCGAGGTTCGCGGCGGCGATGGTGAAGATGGGCGGCGTCGAGGTGCTCACCGGGAACGCCGGCGAGGTCAGGAAGGTCTGCTTCGCCACCAACACGGCGAGCTGATAATTAAGCTACAAGTTCTCTTTCTCCAGCGATCGGCTGGATCATTACCACATAATATATATATTCCTTGTTATTTTGATCTCTTAATTTGTACTCCGTAGTTACCTGCATCGATTCTTGCTGTTGTAAAACTGAATTGTAATTCACTATCTTTGAATATTCAGTGATCAGT ] [+] EMBL OSR22131A [ AGACATTCTCTCTTGTTGGTTAACTAAATAGCTTAATTAATTTGAGGAGTTTAGTCTCTGAAACATGGCGATGGCGACAGCAGCATGCAGAAGGCCTGCAGTGATGCTCATGGCGTTCGCCATGGCGGCTGCGGTGACGATGAGCTCCGTGCCGCCGGCGTCGGGGACGACGACGCTGCAGTACGACTTCTACTCGTCGTCGTGCCCGAAAGCCGAGGAGACGGTGAGGAACGTCGTCGAGCCGATGATCTTCAACGACCCCACCATGGGCGCCGCCTTCATCCGCCTCTTCTTCCACGACTGC TTCGTCAGGGGTTGTGACGCGTCCATCCTGCT ] [+] EMBL OSR28461A [ AGACATTCTCTCTTGTTGGTTAACTAAATAGCTTAATTAATTTGAGGAGTTTAGTCTCTGAAANATGGNGATGGCGACA NAGCATGCAGAAGGCCTGCAGTGATGCTCATGGNGTTCG CATGGCGGCTGCGGTGACGATGAGCTCCGTGCCGCCGGCGTTGGGGACGA GACGCTGCAGTACGACTTCTACTCGTCGTCGTGCCCGAAAGCCGAGGAGACGGTGAGGAACGTCGTCGAGCCGATGATCTTCAACGACCCCACCATGGGCGCCGNCTTCATCCGNCTCTTCTNTCACGACTGCTTTCGTCAGGGGTTGTG ] [+] EMBL CA755883 [ TCTCTTGTTGGTTAACTAAATAGCTTAATTAATTTGAGGAGTTTAGTCTCTGAAACATGGCGATGGCGACAGCAGCATGCAGAAGGCCTGCAGTGATGCTCATGGCGTTCGCCATGGCGGCTGCGGTGACGATGAGCTCCGTGCCGCCGGCGTCGGGGACGACGACGCTGCAGTACGACTTCTACTCGTCGTCGTGCCCGAAAGCCGAGGAGACGGTGAGGAACGTCGTCGAGCCGATGATCTTCAACGACCCCACCATGGGCGCCGCCTTCATCCGCCTCTTCTTCCACGACTGC TTCGTCAGGGGTTGTGACGCGTCCATCCTGCTGGACCCGACGAGCAGAAACACGCAGCCGGAGAAGACGGCGATCCCGCTGCGCGGCTACGACGCCGTGAACAAGATCAAGGCCGCCGTCGAGGCCGTCTGCCCCGGCNAGGTCTCCTGCGCCGACATCCTCGCCTTCGCCGCGCGCGACTCCGCCGTCGTCAACGGCNACTTCGCCTTCGCCATGCCCTCCGGNCGCCGCGACGGNACCGCCTCCTCCGCCTCCGACGTCGCCCGGNTCATCCCGTCCCCGGCGTTCCACCTCCAGGACCTCGTCGACAGCTT ] [+] EMBL C20498 [ AGCCGATGGTCNACGACAACGCCGCCAACCCGGTGCCGTGGATGNCGAGGTTCGCGGCGCCGATGNTGAAGATGGCCGCCGTCNAGGTGCTCACCGGNAACGCCGGCGAGGTCAGNAAGGTCCTCTTCGCCACCAACACGGCGAGNTGATAATTAAGCTACAAGTTCTCTTTCTCCAGCGATCGGCTGGATCATTACCACATAATATATATATTCCTTGTTATTTTGATCTCTTAATTTGTACTCCGTAGTTACCTGCATCGATTCTTGCTGTTGTAAAACTGAATTGTAATTCACTATCTTTGAATATTCAGTGATCAGTTACNGTGGTTAAAAA ] [+] EMBL AU031857 [ TCGAGGTGNTCACCGGGAACGCCGGCGAGGTCAGGAAGGTCTG TTCGCCACCAACACGGCGNGCTGATAATTAAGCTACAAGTTCTCTTTCTCCNGCGATCGGCTGGATCATTACCACATAATATATATATTCCTTGTTATTTTGATCTCTTAATTTGTACTCCGTAGTTACCTGCATCGATTCTTGCTGTTGTAAAACTGAATTGTAATTCACTATCTTTGAATATTCAGTGATCAGTTACNGTGGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||