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Oryza sativa
cluster # 9381 cluster # 9381       Sequences # 6       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9381#0 length = 1400 sequences # 2  
consensus_9381#1 length = 1017 sequences # 2  
consensus_9381#2 length = 779 sequences # 1  
consensus_9381#3 length = 259 sequences # 1  

consensusID : consensus_9381#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1400
fasta sequence
                              [AAGCATCGATCCAATCCAATCGAGGCCATGGCCGCCGGCGTGAAGAACATGGTCATCGCCATCCTCGTCCCTCTCCCTTCCCTCCTCTTCTTCTTCTCTTTCGTCCGCCCCACCACCACCCCGTCCCCGGTGTCGTCGTGGTGCGCCGCCCACCCCCTCCTCGTCGCCAACCTCCTCTTCCTCTTCAACGTTGACCTCCTCTTCTGGCTCATCGGCAATCTCCTCTCCAACCACTGGGTCAGTTCTTTTCCTCCTCTCTAGACTTTAGTGTTCTTCACTGCTCTGTTGCTTTTGCCCGCAACCTGTTTGACGAAATGCCTTGTTTGTTGCAGCTCATCGATCTGTACTGGACCGTCATCCCGGTGATGCTGCTGCACTACTACCGGGCCCACCCGGCCGCGGTTGCGGACACGGCGAGGTCGGCGGTGGCGGTGGCGCTCACCTGGGTGTGGAGCGCCAGGCTGACGCACAACTACCTGAGGAGGGAAGGGTGGCAATGGGGCAAGAGGGAGGATTGGAGGTTCGCCGAGATGCGGGGGCAGTACGGCAGGGCGTGGTGGTGGATGTCCTTCTTCGCCGTCTACCTCTCGCAGCAGGTGTTCCTCATCGGCATCTGCCTCCCCATGTACGCCATCCACTCCACCACCCAGCCATGGGGCGCCTGGGACGTCGTGGCAACAATGGCATGCCTCGCCGGCATCGTCATCGCCCACTTCGCCGACACGCAGCTGCACAGGTTCGTGACCACCAACGAGAAGCTGAAGAAGGTCGGCGAGCCCACGGTGCTGACCATGGAGGCCGGGCTGTGGCGGTACTCGCGGCATCCCAACTACTTCGGGGAGCAGCTGTGGTGGTGGGGGCTGTACCTGTTCGCCTGGAACATCGGGCAGCCATGGATGGTGGTCGGGCCGCTTGTGAACAGCCTGTGCCTTGGCTATGTCACCGTGCTGGTGGAGCGGCGAATGGTGAAGCAGGAGCACCGAGCAGAGGCCTACAAGCTGTACCAGAAGAGGACCTCCGTTTGGATCCCCTGGTTCAGGAAGCCCGTCCCTCAACCCTACAACCACAAGGACAGCTCAAACCAAAATTCGCTCAAAATTTCGCACTCTTGATTGTTCACCTTTATGTGTTTGATCACTTTGATTGCTCCTTCCTGTCTGTCGTGCTTTCGTGATGTTTCATTTGTTGTCGTGTAATTAACTATTTGTAATCTGTAACTTGTACCATCATCACTTTGCAAGGTGTCTGCAAATTCACGGTGTAATCTCTACTCATCGCCTTCACTAAAATGAATTACATGTATTACTAGCGAGCGACAGCTGAATGCTTGATGCAGGAGACTCTGTCCATCAAATGTCAAAAACACAATAAGTTAACTAATGCTGAATCCAGGCTTGATC]

[+] EMBL CA755276             [AAGCATCGATCCAATCCAATCGAGGCCATGGCCGCCGGCGTGAAGAACATGGTCATCGCCATCCTCGTCCCTCTCCCTTCCCTCCTCTTCTTCTTCTCTTTCGTCCGCCCCACCACCACCCCGTCCCCGGTGTCGTCGTGGTGCGCCGCCCACCCCCTCCTCGTCGCCAACCTCCTCTTCCTCTTCAACGTTGACCTCCTCTTCTGGCTCATCGGCAATCTCCTCTCCAACCACTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK101957             [            AATCCAATCGAGGCCATGGCCGCCGGCGTGAAGAACATGGTCATCGCCATCCTCGTCCCTCTCCCTTCCCTCCTCTTCTTCTTCTCTTTCGTCCGCCCCACCACCACCCCGTCCCCGGTGTCGTCGTGGTGCGCCGCCCACCCCCTCCTCGTCGCCAACCTCCTCTTCCTCTTCAACGTTGACCTCCTCTTCTGGCTCATCGGCAATCTCCTCTCCAACCACTGGGTCAGTTCTTTTCCTCCTCTCTAGACTTTAGTGTTCTTCACTGCTCTGTTGCTTTTGCCCGCAACCTGTTTGACGAAATGCCTTGTTTGTTGCAGCTCATCGATCTGTACTGGACCGTCATCCCGGTGATGCTGCTGCACTACTACCGGGCCCACCCGGCCGCGGTTGCGGACACGGCGAGGTCGGCGGTGGCGGTGGCGCTCACCTGGGTGTGGAGCGCCAGGCTGACGCACAACTACCTGAGGAGGGAAGGGTGGCAATGGGGCAAGAGGGAGGATTGGAGGTTCGCCGAGATGCGGGGGCAGTACGGCAGGGCGTGGTGGTGGATGTCCTTCTTCGCCGTCTACCTCTCGCAGCAGGTGTTCCTCATCGGCATCTGCCTCCCCATGTACGCCATCCACTCCACCACCCAGCCATGGGGCGCCTGGGACGTCGTGGCAACAATGGCATGCCTCGCCGGCATCGTCATCGCCCACTTCGCCGACACGCAGCTGCACAGGTTCGTGACCACCAACGAGAAGCTGAAGAAGGTCGGCGAGCCCACGGTGCTGACCATGGAGGCCGGGCTGTGGCGGTACTCGCGGCATCCCAACTACTTCGGGGAGCAGCTGTGGTGGTGGGGGCTGTACCTGTTCGCCTGGAACATCGGGCAGCCATGGATGGTGGTCGGGCCGCTTGTGAACAGCCTGTGCCTTGGCTATGTCACCGTGCTGGTGGAGCGGCGAATGGTGAAGCAGGAGCACCGAGCAGAGGCCTACAAGCTGTACCAGAAGAGGACCTCCGTTTGGATCCCCTGGTTCAGGAAGCCCGTCCCTCAACCCTACAACCACAAGGACAGCTCAAACCAAAATTCGCTCAAAATTTCGCACTCTTGATTGTTCACCTTTATGTGTTTGATCACTTTGATTGCTCCTTCCTGTCTGTCGTGCTTTCGTGATGTTTCATTTGTTGTCGTGTAATTAACTATTTGTAATCTGTAACTTGTACCATCATCACTTTGCAAGGTGTCTGCAAATTCACGGTGTAATCTCTACTCATCGCCTTCACTAAAATGAATTACATGTATTACTAGCGAGCGACAGCTGAATGCTTGATGCAGGAGACTCTGTCCATCAAATGTCAAAAACACAATAAGTTAACTAATGCTGAATCCAGGCTTGATC]


>consensus_9381#0 AAGCATCGATCCAATCCAATCGAGGCCATGGCCGCCGGCGTGAAGAACATGGTCATCGCC ATCCTCGTCCCTCTCCCTTCCCTCCTCTTCTTCTTCTCTTTCGTCCGCCCCACCACCACC CCGTCCCCGGTGTCGTCGTGGTGCGCCGCCCACCCCCTCCTCGTCGCCAACCTCCTCTTC CTCTTCAACGTTGACCTCCTCTTCTGGCTCATCGGCAATCTCCTCTCCAACCACTGGGTC AGTTCTTTTCCTCCTCTCTAGACTTTAGTGTTCTTCACTGCTCTGTTGCTTTTGCCCGCA ACCTGTTTGACGAAATGCCTTGTTTGTTGCAGCTCATCGATCTGTACTGGACCGTCATCC CGGTGATGCTGCTGCACTACTACCGGGCCCACCCGGCCGCGGTTGCGGACACGGCGAGGT CGGCGGTGGCGGTGGCGCTCACCTGGGTGTGGAGCGCCAGGCTGACGCACAACTACCTGA GGAGGGAAGGGTGGCAATGGGGCAAGAGGGAGGATTGGAGGTTCGCCGAGATGCGGGGGC AGTACGGCAGGGCGTGGTGGTGGATGTCCTTCTTCGCCGTCTACCTCTCGCAGCAGGTGT TCCTCATCGGCATCTGCCTCCCCATGTACGCCATCCACTCCACCACCCAGCCATGGGGCG CCTGGGACGTCGTGGCAACAATGGCATGCCTCGCCGGCATCGTCATCGCCCACTTCGCCG ACACGCAGCTGCACAGGTTCGTGACCACCAACGAGAAGCTGAAGAAGGTCGGCGAGCCCA CGGTGCTGACCATGGAGGCCGGGCTGTGGCGGTACTCGCGGCATCCCAACTACTTCGGGG AGCAGCTGTGGTGGTGGGGGCTGTACCTGTTCGCCTGGAACATCGGGCAGCCATGGATGG TGGTCGGGCCGCTTGTGAACAGCCTGTGCCTTGGCTATGTCACCGTGCTGGTGGAGCGGC GAATGGTGAAGCAGGAGCACCGAGCAGAGGCCTACAAGCTGTACCAGAAGAGGACCTCCG TTTGGATCCCCTGGTTCAGGAAGCCCGTCCCTCAACCCTACAACCACAAGGACAGCTCAA ACCAAAATTCGCTCAAAATTTCGCACTCTTGATTGTTCACCTTTATGTGTTTGATCACTT TGATTGCTCCTTCCTGTCTGTCGTGCTTTCGTGATGTTTCATTTGTTGTCGTGTAATTAA CTATTTGTAATCTGTAACTTGTACCATCATCACTTTGCAAGGTGTCTGCAAATTCACGGT GTAATCTCTACTCATCGCCTTCACTAAAATGAATTACATGTATTACTAGCGAGCGACAGC TGAATGCTTGATGCAGGAGACTCTGTCCATCAAATGTCAAAAACACAATAAGTTAACTAA TGCTGAATCCAGGCTTGATC



consensusID : consensus_9381#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1017
fasta sequence
                              [TCAACTCTCAACAAGAAGAAGCAGAAGCATCGATCCAATCCAATCGAGGCCATGGCCGCCGGCGTGAAGAACATGGTCATCGCCATCCTCGTCCCTCTCCCTTCCCTCCTCTTCTTCTTCTCTTTCGTCCGCCCCACCCGGCCGCGGTTGCGGACACGGCGAGGTCGGCGGTGGCGGTGGCGCTCACCTGGGTGTGGAGCGCCAGGCTGACGCACAACTACCTGAGGAGGGAAGGGTGGCAATGGGGCAAGAGGGAGGATTGGAGGTTCGCCGAGATGCGGGGGCAGTACGGC-AGGG-CGTGGTGGTGGATGTCCTTCTTCGCCGTCTACCTCTCGCAGCAGGTGTTCCTCATCGGCATCTGCCTCCCCATGTACGCCATCCACTCCACCACCCAGCCATGGGGCGCCTGGGACGTCGTGGCAACAATGGCATGCCTCGCCGGCATCGTCATCGCCCACTTCGCCGACACGCAGCTGCACAGGTTCGTGACCACCAACGAGAAGCTGAAGAAGGTCGGCGAGCCCACGGTGCTGACCATGGAGGCCGGGCTGTGGCGGTACTCGCGGCATCCCAACTACTTCGGGGAGCAGCTGTGGTGGTGGGGGCTGTACCTGTTCGCCTGGAACATCGGGCAGCCATGGATGGTGGTCGGGCCGCTTGTGAACAGCCTGTGCCTTGGCTATGTCACCGTGCTGGTGGAGCGGCGAATGGTGAAGCAGGAGCACCGAGCAGAGGCCTACAAGCTGTACCAGAAGAGGACCTCCGTTTGGATCCCCTGGTTCAGGAAGCCCGTCCCTCAACCCTACAACCACAAGGACAGCTCAAACCAAAATTCGCTCAAAATTTCGCACTCTTGATTGTTCACCTTTATGTGTTTGATCACTTTGATTGCTCCTTCCTGTCTGTCGTGCTTTTGTGATGTTTCATTTGTTGTCGTGTAATTAACTATTTGTAATCTGTAACTTGTACCATCATCACTTTGCAAGGTGTCTGCAAATTCACGGTGTAATCTCTACT]

[+] EMBL AK060144             [TCAACTCTCAACAAGAAGAAGCAGAAGCATCGATCCAATCCAATCGAGGCCATGGCCGCCGGCGTGAAGAACATGGTCATCGCCATCCTCGTCCCTCTCCCTTCCCTCCTCTTCTTCTTCTCTTTCGTCCGCCCCACCCGGCCGCGGTTGCGGACACGGCGAGGTCGGCGGTGGCGGTGGCGCTCACCTGGGTGTGGAGCGCCAGGCTGACGCACAACTACCTGAGGAGGGAAGGGTGGCAATGGGGCAAGAGGGAGGATTGGAGGTTCGCCGAGATGCGGGGGCAGTACGGC AGGG CGTGGTGGTGGATGTCCTTCTTCGCCGTCTACCTCTCGCAGCAGGTGTTCCTCATCGGCATCTGCCTCCCCATGTACGCCATCCACTCCACCACCCAGCCATGGGGCGCCTGGGACGTCGTGGCAACAATGGCATGCCTCGCCGGCATCGTCATCGCCCACTTCGCCGACACGCAGCTGCACAGGTTCGTGACCACCAACGAGAAGCTGAAGAAGGTCGGCGAGCCCACGGTGCTGACCATGGAGGCCGGGCTGTGGCGGTACTCGCGGCATCCCAACTACTTCGGGGAGCAGCTGTGGTGGTGGGGGCTGTACCTGTTCGCCTGGAACATCGGGCAGCCATGGATGGTGGTCGGGCCGCTTGTGAACAGCCTGTGCCTTGGCTATGTCACCGTGCTGGTGGAGCGGCGAATGGTGAAGCAGGAGCACCGAGCAGAGGCCTACAAGCTGTACCAGAAGAGGACCTCCGTTTGGATCCCCTGGTTCAGGAAGCCCGTCCCTCAACCCTACAACCACAAGGACAGCTCAAACCAAAATTCGCTCAAAATTTCGCACTCTTGATTGTTCACCTTTATGTGTTTGATCACTTTGATTGCTCCTTCCTGTCTGTCGTGCTTTTGTGATGTTTCATTTGTTGTCGTGTAATTAACTATTTGTAATCTGTAACTTGTACCATCATCACTTTGCAAGGTGTCTGCAAATTCACGGTGTAATCTCTACT]
[+] EMBL AU162465             [                                                                                                                                                                                                                                                                                                 CGGCAAGGGCCNTGGTGGTGGATGTCCTTCTTCGCCGTCTACCTCTCGCAGCAGGTGTTCCTCATCGGCATCTGCCTCCCCATGTACGCCATCCACTCCACCACCCAGCCATGGGGCGCCTGGGACGTCGTGGCAACAATGGCATGCCTCGCCGGCATCGTCATCGCCCACTTCGCCGACACGCAGCTGCACAGGTTCGTGACCACCAACGAGAAGCTGAAGAAGGTCGGCGAGCCCACGGTGCTGACCATGGAGGCCGGGCTGTGGCGGTACTCGCGGCATCCCAACTACTTCGGGGAGCAGCTGTGGTGGTGGGGGCTGTACCTGTTCGCCTGGAACATCGGGCAGCCATGGATGGTGGTCGGGCCGCTTGTGAACAGCCTGTGCCTTGGCTATGTCACCGTGCTGGTGGAGCGGCGAATGGTGAAGCAGGAGCACCGAGCAGAGGCCTACAAGCTGTACCAGAAGAGGACCTCCGTTTGGATCCCCTGGTTCAGGAAGCCCGTCCCTCAACCCTACAACCACAAGGACAGCTCAAACCAAAATTCGCTCAAAATTTCGCACTCTTGATTGTTCACCTTTATGTGTTTGATCACTTTGATTGCTCCTTCCTGTCTGTCGTGCTTTTGTGATGTTTCATTTGTTGTCGTGTAATTAACTATTTGTAATCTGTAACTTGTACCATCATCAaaaa                                    ]


>consensus_9381#1 TCAACTCTCAACAAGAAGAAGCAGAAGCATCGATCCAATCCAATCGAGGCCATGGCCGCC GGCGTGAAGAACATGGTCATCGCCATCCTCGTCCCTCTCCCTTCCCTCCTCTTCTTCTTC TCTTTCGTCCGCCCCACCCGGCCGCGGTTGCGGACACGGCGAGGTCGGCGGTGGCGGTGG CGCTCACCTGGGTGTGGAGCGCCAGGCTGACGCACAACTACCTGAGGAGGGAAGGGTGGC AATGGGGCAAGAGGGAGGATTGGAGGTTCGCCGAGATGCGGGGGCAGTACGGCAGGGCGT GGTGGTGGATGTCCTTCTTCGCCGTCTACCTCTCGCAGCAGGTGTTCCTCATCGGCATCT GCCTCCCCATGTACGCCATCCACTCCACCACCCAGCCATGGGGCGCCTGGGACGTCGTGG CAACAATGGCATGCCTCGCCGGCATCGTCATCGCCCACTTCGCCGACACGCAGCTGCACA GGTTCGTGACCACCAACGAGAAGCTGAAGAAGGTCGGCGAGCCCACGGTGCTGACCATGG AGGCCGGGCTGTGGCGGTACTCGCGGCATCCCAACTACTTCGGGGAGCAGCTGTGGTGGT GGGGGCTGTACCTGTTCGCCTGGAACATCGGGCAGCCATGGATGGTGGTCGGGCCGCTTG TGAACAGCCTGTGCCTTGGCTATGTCACCGTGCTGGTGGAGCGGCGAATGGTGAAGCAGG AGCACCGAGCAGAGGCCTACAAGCTGTACCAGAAGAGGACCTCCGTTTGGATCCCCTGGT TCAGGAAGCCCGTCCCTCAACCCTACAACCACAAGGACAGCTCAAACCAAAATTCGCTCA AAATTTCGCACTCTTGATTGTTCACCTTTATGTGTTTGATCACTTTGATTGCTCCTTCCT GTCTGTCGTGCTTTTGTGATGTTTCATTTGTTGTCGTGTAATTAACTATTTGTAATCTGT AACTTGTACCATCATCACTTTGCAAGGTGTCTGCAAATTCACGGTGTAATCTCTACT



consensusID : consensus_9381#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 779
fasta sequence
                              [TGCCTCATGGGCATCTGCCTCCCCATGTACGCCATCCACTCCACCACCCAGCCATGGGGCGCCTGGGACGTCGTGGCAACAATGGCATGCCTCGCCGGCATCGTCATCGCCCACTTCGCCGACACGCAGCTGCACAGGTTCGTGACCACCAACGAGAAGCTGAAGAAGGTCGGCGAGCCCACGGTGCCGACCATGGAGGCCGGGCTGTGGCGGTACTCGCGGCATCCCAACTACTTCGGGGAGCAGCTGTGGTGGTGGGGGCTGTACCTGTTCGCCTGGAACATCGGGCAGCCATGGATGGTGGTCGGGCCGCTTGTGAACAGCCTGTGCCTTGGCTATGTCACCGTGCTGGTGGAGCGGCGAATGGTGAAGCAGGAGCACCGAGCAGAGGCCTACAAGCTGTACCAGAAGAGGACCTCCGTTTGGATCCCCTGGTTCAGGAAGCCCGTCCCTCAACCCTACAACCACAAGGACAGCTCAAACCAAAATTCGCTCAAAATTTCGCACTCTTGATTGTTCACCTTTGATTGCTCCTTCCTGTCTGTCGTGCTTTTGTGATGTTTCATTTGTTGGCGGGGAATTAACTATTTGGAAAGCGTAACTTGTACCATCATCACTTTGCAGGGTGTCTGGAAATTCACGGTGTAAAACAAAAAAAAAAAAAAAAAAAGCTCAAGGGGGGGCCAGGTACCACATTCGCCTATAGGGGTCGAATACCCCCCTCACGGCCGGCGTTTACACCGCGGGCTGGGAAACCCTGGCGTTCCAACTAATGCCTT]

[+] EMBL BE040639             [TGCCTCATGGGCATCTGCCTCCCCATGTACGCCATCCACTCCACCACCCAGCCATGGGGCGCCTGGGACGTCGTGGCAACAATGGCATGCCTCGCCGGCATCGTCATCGCCCACTTCGCCGACACGCAGCTGCACAGGTTCGTGACCACCAACGAGAAGCTGAAGAAGGTCGGCGAGCCCACGGTGCCGACCATGGAGGCCGGGCTGTGGCGGTACTCGCGGCATCCCAACTACTTCGGGGAGCAGCTGTGGTGGTGGGGGCTGTACCTGTTCGCCTGGAACATCGGGCAGCCATGGATGGTGGTCGGGCCGCTTGTGAACAGCCTGTGCCTTGGCTATGTCACCGTGCTGGTGGAGCGGCGAATGGTGAAGCAGGAGCACCGAGCAGAGGCCTACAAGCTGTACCAGAAGAGGACCTCCGTTTGGATCCCCTGGTTCAGGAAGCCCGTCCCTCAACCCTACAACCACAAGGACAGCTCAAACCAAAATTCGCTCAAAATTTCGCACTCTTGATTGTTCACCTTTGATTGCTCCTTCCTGTCTGTCGTGCTTTTGTGATGTTTCATTTGTTGGCGGGGAATTAACTATTTGGAAAGCGTAACTTGTACCATCATCACTTTGCAGGGTGTCTGGAAATTCACGGTGTAAAACAAAAAAAAAAAAAAAAAAAGCTCAAGGGGGGGCCAGGTACCACATTCGCCTATAGGGGTCGAATACCCCCCTCACGGCCGGCGTTTACACCGCGGGCTGGGAAACCCTGGCGTTCCAACTAATGCCTT]


>consensus_9381#2 TGCCTCATGGGCATCTGCCTCCCCATGTACGCCATCCACTCCACCACCCAGCCATGGGGC GCCTGGGACGTCGTGGCAACAATGGCATGCCTCGCCGGCATCGTCATCGCCCACTTCGCC GACACGCAGCTGCACAGGTTCGTGACCACCAACGAGAAGCTGAAGAAGGTCGGCGAGCCC ACGGTGCCGACCATGGAGGCCGGGCTGTGGCGGTACTCGCGGCATCCCAACTACTTCGGG GAGCAGCTGTGGTGGTGGGGGCTGTACCTGTTCGCCTGGAACATCGGGCAGCCATGGATG GTGGTCGGGCCGCTTGTGAACAGCCTGTGCCTTGGCTATGTCACCGTGCTGGTGGAGCGG CGAATGGTGAAGCAGGAGCACCGAGCAGAGGCCTACAAGCTGTACCAGAAGAGGACCTCC GTTTGGATCCCCTGGTTCAGGAAGCCCGTCCCTCAACCCTACAACCACAAGGACAGCTCA AACCAAAATTCGCTCAAAATTTCGCACTCTTGATTGTTCACCTTTGATTGCTCCTTCCTG TCTGTCGTGCTTTTGTGATGTTTCATTTGTTGGCGGGGAATTAACTATTTGGAAAGCGTA ACTTGTACCATCATCACTTTGCAGGGTGTCTGGAAATTCACGGTGTAAAACAAAAAAAAA AAAAAAAAAAGCTCAAGGGGGGGCCAGGTACCACATTCGCCTATAGGGGTCGAATACCCC CCTCACGGCCGGCGTTTACACCGCGGGCTGGGAAACCCTGGCGTTCCAACTAATGCCTT



consensusID : consensus_9381#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 259
fasta sequence
                              [GAAGCATCGATCCAATCCAATCGAGGCCATGGCCGCCGGCGTGAAGAACATGGTCATCGCCATCCTCGTCCCTCTCCCTTCCCTCCTCTTCTTCTTCTCTTTCGTCCGGCCCACCACCACCCCGTCCCCGGTGTCGTCGTGGTGCGCCGCCCACCCCCTCCTCGTCGCCAACCTCCTCTTCCTCTTCAACGTTGACCTCCTCTTCTGGCTCATCGGCAATCTCCTCTCCAACCACTGGCTCATCGATCTGTACTGGACC]

[+] EMBL AU032060             [GAAGCATCGATCCAATCCAATCGAGGCCATGGCCGCCGGCGTGAAGAACATGGTCATCGCCATCCTCGTCCCTCTCCCTTCCCTCCTCTTCTTCTTCTCTTTCGTCCGGCCCACCACCACCCCGTCCCCGGTGTCGTCGTGGTGCGCCGCCCACCCCCTCCTCGTCGCCAACCTCCTCTTCCTCTTCAACGTTGACCTCCTCTTCTGGCTCATCGGCAATCTCCTCTCCAACCACTGGCTCATCGATCTGTACTGGACC]


>consensus_9381#3 GAAGCATCGATCCAATCCAATCGAGGCCATGGCCGCCGGCGTGAAGAACATGGTCATCGC CATCCTCGTCCCTCTCCCTTCCCTCCTCTTCTTCTTCTCTTTCGTCCGGCCCACCACCAC CCCGTCCCCGGTGTCGTCGTGGTGCGCCGCCCACCCCCTCCTCGTCGCCAACCTCCTCTT CCTCTTCAACGTTGACCTCCTCTTCTGGCTCATCGGCAATCTCCTCTCCAACCACTGGCT CATCGATCTGTACTGGACC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9381#0      ------------------------------------------------------------
consensus_9381#3      ------------------------------------------------------------
consensus_9381#1      TCAACTCTCAACAAGAAGAAGCAGAAGCATCGATCCAATCCAATCGAGGCCATGGCCGCC 60
consensus_9381#2      ------------------------------------------------------------
                                                                                  

consensus_9381#0      ------------------------------------------------------------
consensus_9381#3      ------------------------------------------------------------
consensus_9381#1      GGCGTGAAGAACATGGTCATCGCCATCCTCGTCCCTCTCCCTTCCCTCCTCTTCTTCTTC 120
consensus_9381#2      ------------------------------------------------------------
                                                                                  

consensus_9381#0      ------------------------------------------------------------
consensus_9381#3      ------------------------------------------------------------
consensus_9381#1      TCTTTCGTCCGCCCCACCCGGCCGCGGTTGCGGACACGGCGAGGTCGGCGGTGGCGGTGG 180
consensus_9381#2      ------------------------------------------------------------
                                                                                  

consensus_9381#0      ------------------------------------------------------------
consensus_9381#3      ------------------------------------------------------------
consensus_9381#1      CGCTCACCTGGGTGTGGAGCGCCAGGCTGACGCACAACTACCTGAGGAGGGAAGGGTGGC 240
consensus_9381#2      ------------------------------------------------------------
                                                                                  

consensus_9381#0      ------------------------------------------------------------
consensus_9381#3      ------------------------------------------------------------
consensus_9381#1      AATGGGGCAAGAGGGAGGATTGGAGGTTCGCCGAGATGCGGGGGCAGTACGGCAGGGCGT 300
consensus_9381#2      ------------------------------------------------------------
                                                                                  

consensus_9381#0      ------------------------------------------------------------
consensus_9381#3      ------------------------------------------------------------
consensus_9381#1      GGTGGTGGATGTCCTTCTTCGCCGTCTACCTCTCGCAGCAGGTGTTCCTCATCGGCATCT 360
consensus_9381#2      --------------------------------------------TGCCTCATGGGCATCT 16
                                                                                  

consensus_9381#0      ---------------------------------AAGCATCGATCCAATCCAA--TCGAGG 25
consensus_9381#3      --------------------------------GAAGCATCGATCCAATCCAA--TCGAGG 26
consensus_9381#1      GCCTCCCCATGTACGCCATCCACTCCACCACCCAGCCATGGGGCGCCTGGGACGTCGTGG 420
consensus_9381#2      GCCTCCCCATGTACGCCATCCACTCCACCACCCAGCCATGGGGCGCCTGGGACGTCGTGG 76
                                                       *  *** *  *   *   *  *** **

consensus_9381#0      CCATGGCCGCCGGCGTGAAGAACATGGTCATCGCCATCCTCGTCCCTCTCCCTTCCCTCC 85
consensus_9381#3      CCATGGCCGCCGGCGTGAAGAACATGGTCATCGCCATCCTCGTCCCTCTCCCTTCCCTCC 86
consensus_9381#1      CAACAATGGCATGCCTCGCCGGCATCGTCATCGCCCACTTCGCCGACACGCAGCTGCACA 480
consensus_9381#2      CAACAATGGCATGCCTCGCCGGCATCGTCATCGCCCACTTCGCCGACACGCAGCTGCACA 136
                      * *     **  ** *      *** *********  * *** *      *     * * 

consensus_9381#0      TCTTCTTCTTCTCTTTCGTCCGCCCCACCA---CCACCCCGTCCCCGGTGTCG-TCGTGG 141
consensus_9381#3      TCTTCTTCTTCTCTTTCGTCCGGCCCACCA---CCACCCCGTCCCCGGTGTCG-TCGTGG 142
consensus_9381#1      GGTTCGTGACCACCAACGAGAAGCTGAAGAAGGTCGGCGAGCCCACGGTGCTGACCATGG 540
consensus_9381#2      GGTTCGTGACCACCAACGAGAAGCTGAAGAAGGTCGGCGAGCCCACGGTGCCGACCATGG 196
                        *** *   * *   **     *  *  *    *  *  * ** *****  *  * ***

consensus_9381#0      TGCGCCGCCCACCCCC-TCCTCGTCGC----CAACCTCCTCTT----CCTCTTCAACGTT 192
consensus_9381#3      TGCGCCGCCCACCCCC-TCCTCGTCGC----CAACCTCCTCTT----CCTCTTCAACGTT 193
consensus_9381#1      AGGCCGGGCTGTGGCGGTACTCGCGGCATCCCAACTACTTCGGGGAGCAGCTGTGGTGGT 600
consensus_9381#2      AGGCCGGGCTGTGGCGGTACTCGCGGCATCCCAACTACTTCGGGGAGCAGCTGTGGTGGT 256
                       *  * * *     *  * ****  **    ****  * **      *  **     * *

consensus_9381#0      G--------ACCTCCTCTTCTGGCTCATCGGCAATCTCCTCTCCAACCACTGGGTCAGTT 244
consensus_9381#3      G--------ACCTCCTCTTCTGGCTCATCGGCAATCTCCTCTCCAACCACTGGCTCA--- 242
consensus_9381#1      GGGGGCTGTACCTGTTCGCCTGGAACATCGGGCAGCCATGGATGGTGGTCGGGCCGCTTG 660
consensus_9381#2      GGGGGCTGTACCTGTTCGCCTGGAACATCGGGCAGCCATGGATGGTGGTCGGGCCGCTTG 316
                      *        ****  **  ****  ******  * *             * **       

consensus_9381#0      CTTTTCCTCCTCTC-TAGACTTTAGTGTTCTTCACTGCTCTGTTGCTTTTGCCCGCAACC 303
consensus_9381#3      ---TCGATCTGTAC-TGGACC--------------------------------------- 259
consensus_9381#1      TGAACAGCCTGTGCCTTGGCTATGTCACCGTGCTGGTGGAGCGGCGAATGGTGAAGCAGG 720
consensus_9381#2      TGAACAGCCTGTGCCTTGGCTATGTCACCGTGCTGGTGGAGCGGCGAATGGTGAAGCAGG 376
                              *    * * * *                                        

consensus_9381#0      TGTTTGACGAAATGCCTTGTTTGTTGCAGCTCATCGATCTGTACTGGACCGTCATCCCGG 363
consensus_9381#3      ------------------------------------------------------------
consensus_9381#1      AGCACCGAGCAGAGGCCTACAAGCTGTACCAGAAGAGGACCTCCGTTTGGATCCCCTGGT 780
consensus_9381#2      AGCACCGAGCAGAGGCCTACAAGCTGTACCAGAAGAGGACCTCCGTTTGGATCCCCTGGT 436
                                                                                  

consensus_9381#0      TGATGCTGCTGCACTACTACCGGGCCCACCCGGCCGCGGTTGCGGACACGGCGAGGTCGG 423
consensus_9381#3      ------------------------------------------------------------
consensus_9381#1      TCAGGAAGCCCGTCCCTCAACCCTACAACCACAAGGACAGCTCAAACCAAAATTCGCTCA 840
consensus_9381#2      TCAGGAAGCCCGTCCCTCAACCCTACAACCACAAGGACAGCTCAAACCAAAATTCGCTCA 496
                                                                                  

consensus_9381#0      CGGTGGCGGTGGCGCTCACCTGGGTGTGGAGCGCCAGGCTGACGCACAACTACCTGAGGA 483
consensus_9381#3      ------------------------------------------------------------
consensus_9381#1      AAATTTCGCACTCTTGATTGTTCACCTTTATGTGTTTGATCACTTTGATTGCTCCTTCCT 900
consensus_9381#2      AAATTTCGCACTCTTGATTGTTCACCTTT-----------------GATTGCTCCTTCCT 539
                                                                                  

consensus_9381#0      GGGAAGGGTGGCAATGGGGCAAGAGGGAGGATTGGAGGTTCGCCGAGATGCGGGGGCAGT 543
consensus_9381#3      ------------------------------------------------------------
consensus_9381#1      GTCTGTCGTGCTTTTGTGATGTTTCATTTGTTGTCGTGTAATTAACTATTTGTAATCTGT 960
consensus_9381#2      GTCTGTCGTGCTTTTGTGATGTTTCATTTGTTGGCGGGGAATTAACTATTTGGAAAGCGT 599
                                                                                  

consensus_9381#0      ACGGCAGGGCGTGGTGGTGGATGTCCTTCTTCGCCGTCTACCTCTCGCAGCAGGTGTTCC 603
consensus_9381#3      ------------------------------------------------------------
consensus_9381#1      AACTTGTACCATCATCACTTTGCAAGGTGTCTGCAAATTCACGGTGTAATCTCTACT--- 1017
consensus_9381#2      AACTTGTACCATCATCACTTTGCAGGGTGTCTGGAAATTCACGGTGTAAAACAAAAAAAA 659
                                                                                  

consensus_9381#0      TCATCGGCATCTGCCTCCCCATGTACGCCATCCACTCCACCACCCAGCCATGGGGCGCCT 663
consensus_9381#3      ------------------------------------------------------------
consensus_9381#1      ------------------------------------------------------------
consensus_9381#2      AAAAAAAAAAAGCTCAAGGGGGGGCCAGGTACCACATTCGCCTATAGGGGTCGAATACCC 719
                                                                                  

consensus_9381#0      GGGACGTCGTGGCAACAATGGCATGCCTCGCCGGCATCGTCATCGCCCACTTCGCCGACA 723
consensus_9381#3      ------------------------------------------------------------
consensus_9381#1      ------------------------------------------------------------
consensus_9381#2      CCCTCACGGCCGGCGTTTACACCGCGGGCTGGGAAACCCTGGCGTTCCAACTAATGCCTT 779
                                                                                  

consensus_9381#0      CGCAGCTGCACAGGTTCGTGACCACCAACGAGAAGCTGAAGAAGGTCGGCGAGCCCACGG 783
consensus_9381#3      ------------------------------------------------------------
consensus_9381#1      ------------------------------------------------------------
consensus_9381#2      ------------------------------------------------------------
                                                                                  

consensus_9381#0      TGCTGACCATGGAGGCCGGGCTGTGGCGGTACTCGCGGCATCCCAACTACTTCGGGGAGC 843
consensus_9381#3      ------------------------------------------------------------
consensus_9381#1      ------------------------------------------------------------
consensus_9381#2      ------------------------------------------------------------
                                                                                  

consensus_9381#0      AGCTGTGGTGGTGGGGGCTGTACCTGTTCGCCTGGAACATCGGGCAGCCATGGATGGTGG 903
consensus_9381#3      ------------------------------------------------------------
consensus_9381#1      ------------------------------------------------------------
consensus_9381#2      ------------------------------------------------------------
                                                                                  

consensus_9381#0      TCGGGCCGCTTGTGAACAGCCTGTGCCTTGGCTATGTCACCGTGCTGGTGGAGCGGCGAA 963
consensus_9381#3      ------------------------------------------------------------
consensus_9381#1      ------------------------------------------------------------
consensus_9381#2      ------------------------------------------------------------
                                                                                  

consensus_9381#0      TGGTGAAGCAGGAGCACCGAGCAGAGGCCTACAAGCTGTACCAGAAGAGGACCTCCGTTT 1023
consensus_9381#3      ------------------------------------------------------------
consensus_9381#1      ------------------------------------------------------------
consensus_9381#2      ------------------------------------------------------------
                                                                                  

consensus_9381#0      GGATCCCCTGGTTCAGGAAGCCCGTCCCTCAACCCTACAACCACAAGGACAGCTCAAACC 1083
consensus_9381#3      ------------------------------------------------------------
consensus_9381#1      ------------------------------------------------------------
consensus_9381#2      ------------------------------------------------------------
                                                                                  

consensus_9381#0      AAAATTCGCTCAAAATTTCGCACTCTTGATTGTTCACCTTTATGTGTTTGATCACTTTGA 1143
consensus_9381#3      ------------------------------------------------------------
consensus_9381#1      ------------------------------------------------------------
consensus_9381#2      ------------------------------------------------------------
                                                                                  

consensus_9381#0      TTGCTCCTTCCTGTCTGTCGTGCTTTCGTGATGTTTCATTTGTTGTCGTGTAATTAACTA 1203
consensus_9381#3      ------------------------------------------------------------
consensus_9381#1      ------------------------------------------------------------
consensus_9381#2      ------------------------------------------------------------
                                                                                  

consensus_9381#0      TTTGTAATCTGTAACTTGTACCATCATCACTTTGCAAGGTGTCTGCAAATTCACGGTGTA 1263
consensus_9381#3      ------------------------------------------------------------
consensus_9381#1      ------------------------------------------------------------
consensus_9381#2      ------------------------------------------------------------
                                                                                  

consensus_9381#0      ATCTCTACTCATCGCCTTCACTAAAATGAATTACATGTATTACTAGCGAGCGACAGCTGA 1323
consensus_9381#3      ------------------------------------------------------------
consensus_9381#1      ------------------------------------------------------------
consensus_9381#2      ------------------------------------------------------------
                                                                                  

consensus_9381#0      ATGCTTGATGCAGGAGACTCTGTCCATCAAATGTCAAAAACACAATAAGTTAACTAATGC 1383
consensus_9381#3      ------------------------------------------------------------
consensus_9381#1      ------------------------------------------------------------
consensus_9381#2      ------------------------------------------------------------
                                                                                  

consensus_9381#0      TGAATCCAGGCTTGATC 1400
consensus_9381#3      -----------------
consensus_9381#1      -----------------
consensus_9381#2      -----------------
                                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)