cluster # 9405

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Oryza sativa
cluster # 9405 cluster # 9405 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9405#0 length = 700 sequences # 6
consensusID : consensus_9405#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 700
fasta sequence
                              [GCTTGTCTGTCCCTTCGCTTCAACTTCTCTCTCTCGCTCCGAATAAAAACAGCAGAGGAAAACGTGAGCAGAAACCGCAGAGATATTGATCAAAAGCTGCG-TTTTTTTCCCTTCTTTTTTTGGCAGCAAGTTAATTCCACCCTCCACTCCTCCATGTTCTTCTACTAGTGGCACAGCAGAGCGGCCACAACCGCTCACCTCACCACTC-CTTCCTCCAATTTCGCATTCAAGGCGACTCCTTTGGTTAGAGTAGTAGAGGTGCACGAACCAAGAACCAGAAGCAGAAGCGGAAGCAGAGGCAGCAATGCAGGGCTCCAAGACCAAATCTGGCCATGCCGAGGCGAAGAGCAACGGCAAGGCGGAGGCGAAGGGCACGCCGCCGACGCCCAAGAGCGCCAAGATTGCGAGGAAGCCGGCCGTGCCCAAGGCGCCGCCGCGCCCCTCCGCCGACAAGTCCCAGTCCCCCGGCTCGGCCGACCGCAAGAAGAGCGCCTCCCGGATC-ACCACCCCTCCAGAGAAGCAAGGGAAGGCGACGAAGCCCGCTCAGGAGTCGGTGGCCGCGAAGCCGTCGCCTCAAGAGCCGGTGGCCGTGAAGCCGTCGTCCTATGAGCAGGAGCAGCACGCGCTGCTGGCTGCAGTTCAGGAGGACCTCGTGAAGGCCAACGACGAGTTGGTGGATAATGATAACGAGAAGGGGAAA]

[+] EMBL CB632765             [GCTTGTCTGTCCCTTCGCTTCAACTTCTCTCTCTCGCTCCGAATAAAAACAGCAGAGGAAAACGTGAGCAGAAACCGCAGAGATATTGATCAAAAGCTGCG TTTTTTTCCCTTCTTTTTTTGGCAGCAAGTTAATTCCACCCTCCACTCCTCCATGTTCTTCTACTAGTGGCACAGCAGAGCGGCCACAACCGCTCACCTCACCACTC CTTCCTCCAATTTCGCATTCAAGGCGACTCCTTTGGTTAGAGTAGTAGAGGTGCACGAACCAAGAACCAGAAGCAGAAGCGGAAGCAGAGGCAGCAATGCAGGGCTCCAAGACCAAATCTGGCCATGCCGAGGCGAAGAGCAACGGCAAGGCGGAGGCGAAGGGCACGCCGCCGACGCCCAAGAGCGCCAAGATTGCGAGGAAGCCGGCCGTGCCCAAGGCGCCGCCGCGCCCCTCCGCCGACAAGTCCCAGTCCCCCGGCTCGGCCGACCGCAAGAAGAGCGCCTCCCGGATC ACCACCCCTCCAGAGAAGCAAGGGAAGGCGACGAAGCCCGCTCAGGAGTCGGTGGCCGCGAAGCCGTCGCCTCAAGAGCCGGTGGCCGTGAAGCCG                                                                                                      ]
[+] EMBL CB643970             [                                                                                                 TGCGCTCTTTTTCCCTTCTTTTTTTGGCAGCAAGTTAATTCCACCCTCCACTCCTCCATGTTCTTCTACTAGTGGCACAGCAGAGCGGCCACAACCGCTCACCTCACCACTC CTTCCTCCAATTTCGCATTCAAGGCGACTCCTTTGGTTAGAGTAGTAGAGGTGCACGAACCAAGAACCAGAAGCAGAAGCGGAAGCAGAGGCAGCAATGCAGGGCTCCAAGACCAAATCTGGCCATGCCGAGGCGAAGAGCAACGGCAAGGCGGAGGCGAAGGGCACGCCGCCGACGCCCAAGAGCGCCAAGATTGCGAGGAAGCCGGCCGTGCCCAAGGCGCCGCCGCGCCCCTCCGCCGACAAGTCCCAGTCCCCCGGCTCGGCCGACCGCAAGAAGAGCGCCTCCCGGATC ACCACCCCTCCAGAGAAGCAAGGGAAGGCGACGAAGCCCGCTCAGGAGTCGGTGGCCGCGAAGCCGTCGCCTCAAGAGCCGGTGGCCGTGAAGCCG                                                                                                      ]
[+] EMBL AK073937             [                                                                                                                                                                               AGCAGAGCGGCCACAACCGCTCACCTCACCACTC CTTCCTCCAATTTCGCATTCAAGGCGACTCCTTTGGTCAGAGTAGTAGAGGTGCACGAACCAAGAACCAGAAGCAGAAGCGGAAGCAGAGGCAGCAATGCAGGGCTCCAAGACCAAATCTGGCCATGCCGAGGCGAAGAGCAACGGCAAGGCGGAGGCGAAGGGCACGCCGCCGACGCCCAAGAGCGCCAAGATTGCGAGGAAGCCGGCCGTGCCCAAGGCGCCGCCGCGCCCCTCCGCCGACAAGTCCCAGTCCCCCGGCTCGGCCGACCGCAAGAAGAGCGCCTCCCGGATC ACCACCCCTCCAGAGAAGCAAGGGAAGGCGACGAAGCCCGCTCAGGAGTCGGTGGCCGCGAAGCCGTCGCCTCAAGAGCCGGTGGCCGTGAAGCCG                                                                                                      ]
[+] EMBL CB631873             [                                                                                                                                                                                              ACCGCTCACCTCACCACTCGCTTCCTCCAATTTCGCATTCGAGGCGACTCCTTTGGTTAGAGTACTAAAGGTGCACGAACCAAGAACCATAAGCAGAAGCGGAATCAGAGGCAGCAGTGCAGGGCTCCAAGACCAAATCTGGCCATGCCGAGGCAAAGAGCAACGGCAAGGCGGATGCGAAGGGCACGCCGCCGACGCCCGAGAGCGCCAAGATTGCGAGGAAGCCGGCCGTGCCCAAGGCGCCGCCGCGCCCCTCCGCCGACAAGTCCCAGTCCCCCGGCTCGGCCGACCGCAATAAGAGCGCCTCCCGGATC ACCACCCCTCCAGAGAAGCAAGGGAAGGCGACGAATCCCGCTCAAGAGTCGGGGGCCGCTAAGCCGTCACCTCCAGAGCCGGTGGCCGTGAAGCCGTCGTCCTATGAGCAGGAGCAGCACGCGCTGCTGGCTGCAGTTCAGGAGGACCTCGTGAAGGCCAACGACGAGTTGGTGGATAATGATAACGAGAAGGGGAAA]
[+] EMBL CB631909             [                                                                                                                                                                                              ACCGCTCACCTCACCACTC CTTCCTCCAATTTCGCATTCAAGGCGACTCCTTTGGTTAGAGTAGTAGAGGTGCACGAACCAAGAACCAGAAGCAGAAGCGGAAGCAGAGGCAGCAATGCAGGGCTCCAAGACCAAATCTGGCCATGCCGAGGCGAAGAGCAACGGCAAGGCGGAGGCGAAGGGCACGCCGCCGACGCCCAAGAGCGCCAAGATTGCGAGGAAGCCGGCCGTGCCCAAGGCGCCGCCGCGCCCCTCCGCCGACAAGTCCCAGTCCCCCGGCTCGGCCGACCGCAAGAAGAGCGCCTCCCGGATC ACCACCCCTCCAGAGAAGCAAGGGAAGGCGACGAAGCCCGCTCAGGAGTCGGTGGCCGCGAAGCCGTCGCCTCAAGAGCCGGTGGCCGTGAAGCCG                                                                                                      ]
[+] EMBL CB640327             [                                                                                                                                                                                                                                                                                                                                     AATCTGGCCATGCCGAGGCGAAGAGCAACGGCAAGGCGGAGGCGAAGGGCACGCCGCCGACGCCCAAGAGCGCCAAGATTGCGAGGAAGCCGGCCGTGCCCAAGGCGCCGCCGCGCCCCTCCGCCGACTTGTTTTAGTCCCCCGGCTCGGCCGACCGCAAGAAGAGCGCCTTCTTTTTCTATCACCCCTCCAGAGAAGCAAGGGAAGGCGACGAAGCCCGCTCAGGAGTCGGCGGCCGCGAAGCCGTCGCCTCAAGAGCCGGTGGCCGTGAAGCCGTCGTCCCAGGA                                                                                           ]




>consensus_9405#0
GCTTGTCTGTCCCTTCGCTTCAACTTCTCTCTCTCGCTCCGAATAAAAACAGCAGAGGAA
AACGTGAGCAGAAACCGCAGAGATATTGATCAAAAGCTGCGTTTTTTTCCCTTCTTTTTT
TGGCAGCAAGTTAATTCCACCCTCCACTCCTCCATGTTCTTCTACTAGTGGCACAGCAGA
GCGGCCACAACCGCTCACCTCACCACTCCTTCCTCCAATTTCGCATTCAAGGCGACTCCT
TTGGTTAGAGTAGTAGAGGTGCACGAACCAAGAACCAGAAGCAGAAGCGGAAGCAGAGGC
AGCAATGCAGGGCTCCAAGACCAAATCTGGCCATGCCGAGGCGAAGAGCAACGGCAAGGC
GGAGGCGAAGGGCACGCCGCCGACGCCCAAGAGCGCCAAGATTGCGAGGAAGCCGGCCGT
GCCCAAGGCGCCGCCGCGCCCCTCCGCCGACAAGTCCCAGTCCCCCGGCTCGGCCGACCG
CAAGAAGAGCGCCTCCCGGATCACCACCCCTCCAGAGAAGCAAGGGAAGGCGACGAAGCC
CGCTCAGGAGTCGGTGGCCGCGAAGCCGTCGCCTCAAGAGCCGGTGGCCGTGAAGCCGTC
GTCCTATGAGCAGGAGCAGCACGCGCTGCTGGCTGCAGTTCAGGAGGACCTCGTGAAGGC
CAACGACGAGTTGGTGGATAATGATAACGAGAAGGGGAAA
clustalw multiple alignements is not computed in this case