These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9417#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1095 fasta sequence [CTCTCTCTCTCCCCCCCATCTCTACAGAGGCAGCAGCAGCGGCGGCGGCGACAAGGGAAGCCGATGGCCATGGCGACCTCCACCTTCTCCCCCCCGGCCTCGCAGCTCTCCCTCACCCGCCGCCGCCTCCACCCGGGCCCCGACCTCCTCACCCTCTCCTCCCCGCGCCTCCGCGCCGGCCTCCGCCTCGCCCGCGCCGCCGCCGGGGAGGCCCCCGTGGAGACTGTCGAGGCGCCGCCGAGCAAGCCGGAGGCCGAGCCGTCCCCCGCTGCGTCCAACGGGGCCGCCGTCAAGGCCGAGAAGCCGCCGGCGGCGGCGGCGGCGCCCCCGCTGCCCAAGTTCCGGGACTCGAGGTGGGTCAACGGGACGTGGGACCTCAGGCAGTTCGAGAAGGGCGGCGCCGTCGACTGGGACGCCGTCATAGACGCCGAGGCCAGGAGAAGGAAATGGCTTGAAGATTGTCCAGAGGCAACTAGCCCTGACGAGGCCGTTGTCTTCGATACTTCAATCATACCGTGGTGGGCATGGATGAAGCGTTTCCATCTCCCTGAAGCCGAGAAGCTAAATGGCCGTGCTGCCATGATTGGCTTCTTCATGGCATACTTTGTTGATAGCTTGA-CCGGCGTGGGGCTTGTCGA-CCAGATGGGCAACTTCTTCTGCAAAACCCTACTGTTTGTTGCTGTGGCTGGTGTGCTGCTGGTCAGGAAAAACGAGGACATAGAGACAGTGAAGAAGCTCATCGATGAGACGACGTTCTACGACAAGCAATGGCAGGCAACCTGG-CAAGATGAGTCCCCTTCTCAGCCCAAGAAATAGCTCTGAAGTGGAATCTGAATCTGAATCCTCCCTATGTTGTATTGTATCACTTCTTTTTGCAGCCCTTTTCTCAACCCATTTATTAGTGAGGCTCAGTACA-TTTTGAT-GATCTTAATA-CCTATGACGTCTTGTAAAAAGTACGAACTCGTTTCTGTGCTAGAGGTTAACGTTGCTGCGGGTTACTTGGTTGAATGTTTTCTTTGTGAGAATTGCTTGTACTAGTTACTCCCTCCGCTTCATATTATAAAATGCTTTGACTCTTTTCTAAAAAAAAAAAAA] [+] EMBL AK071006 [CTCTCTCTCTCCCCCCCATCTCTACAGAGGCAGCAGCAGCGGCGGCGGCGACAAGGGAAGCCGATGGCCATGGCGACCTCCACCTTCTCCCCCCCGGCCTCGCAGCTCTCCCTCACCCGCCGCCGCCTCCACCCGGGCCCCGACCTCCTCACCCTCTCCTCCCCGCGCCTCCGCGCCGGCCTCCGCCTCGCCCGCGCCGCCGCCGGGGAGGCCCCCGTGGAGACTGTCGAGGCGCCGCCGAGCAAGCCGGAGGCCGAGCCGTCCCCCGCTGCGTCCAACGGGGCCGCCGTCAAGGCCGAGAAGCCGCCGGCGGCGGCGGCGGCGCCCCCGCTGCCCAAGTTCCGGGACTCGAGGTGGGTCAACGGGACGTGGGACCTCAGGCAGTTCGAGAAGGGCGGCGCCGTCGACTGGGACGCCGTCATAGACGCCGAGGCCAGGAGAAGGAAATGGCTTGAAGATTGTCCAGAGGCAACTAGCCCTGACGAGGCCGTTGTCTTCGATACTTCAATCATACCGTGGTGGGCATGGATGAAGCGTTTCCATCTCCCTGAAGCCGAGAAGCTAAATGGCCGTGCTGCCATGATTGGCTTCTTCATGGCATACTTTGTTGATAGCTTGA CCGGCGTGGGGCTTGTCGA CCAGATGGGCAACTTCTTCTGCAAAACCCTACTGTTTGTTGCTGTGGCTGGTGTGCTGCTGGTCAGGAAAAACGAGGACATAGAGACAGTGAAGAAGCTCATCGATGAGACGACGTTCTACGACAAGCAATGGCAGGCAACCTGG CAAGATGAGTCCCCTTCTCAGCCCAAGAAATAGCTCTGAAGTGGAATCTGAATCTGAATCCTCCCTATGTTGTATTGTATCACTTCTTTTTGCAGCCCTTTTCTCAACCCATTTATTAGTGAGGCTCAGTACA TTTTGAT GATCTTAATA CCTATGACGTCTTGTAAAAAGTACGAACTCGTTTCTGTGCTAGAGGTTAACGTTGCTGCGGGTTACTTGGTTGAATGTTTTCTTTGTGAGAATTGCTTGTACTAGTTACTCCCTCCGCTTCATATTATAAAATGCTTTGACTCT ] [+] EMBL AK101502 [CTCTCTCTCTCCCCCCCATCTCTACAGAGGCAGCAGCAGCGGCGGCGGCGACAAGGGAAGCCGATGGCCATGGCGACCTCCACCTTCTCCCCCCCGGCCTCGCAGCTCTCCCTCA CCGCCGCCGCCTCCACCCGGGCCCCGACCTCCTCACCCTCTCCTCCCCGCGCCTCCGCGCCGGCCTCCGCCTCGCCCGCGCCGCCGCCGGGGAGGCCCCCGTGGAGACTGTCGAGGCGCCGCCGAGCAAGCCGGAGGCCGAGCCGTCCCCCGCTGCGTCCAACGGGGCCGCCGTCAAGGCCGAGAAGCCGCCGGCGGCGGCGGCGGCGCCCCCGCTGCCCAAGTTCCGGGACTCGAGGTGGGTCAACGGGACGTGGGACCTCAGGCAGTTCGAGAAGGGCGGCGCCGTCGACTGGGACGCCGTCATAGACGCCGAGGCCAGGAGAAGGAAATGGCTTGAAGATTGTCCAGAGGCAACTAGCCCTGACGAGGCCGTTGTCTTCGATACTTCAATCATACCGTGGTGGGCATGGATGAAGCGTTTCCATCTCCCTGAAGCCGAGAAGCTAAATGGCCGTGCTGCCATGATTGGCTTCTTCATGGCATACTTTGTTGATAGCTTGA CCGGCGTGGGGCTTGTCGA CCAGATGGGCAACTTCTTCTGCAAAACCCTACTGTTTGTTGCTGTGGCTGGTGTGCTGCTGGTCAGGAAAAACGAGGACATAGAGACAGTGAAGAAGCTCATCGATGAGACGACGTTCTACGACAAGCAATGGCAGGCAACCTGG CAAGATGAGTCCCCTTCTCAGCCCAAGAAATAGCTCTGAAGTGGAATCTGAATCTGAATCCTCCCTATGTTGTATTGTATCACTTCTTTTTGCAGCCCCTTTCTCAACCCATTTATTAGTGAGGCTCAGTACA TTTTGAT GATCTTAATA CCTATGACGTCTTGTAAAAAGTACGAACTCGTTTCTGTGCTAGAGGTTAACGTTGCTGCGGGT ] [+] EMBL AU057610 [ TGATTGGCTTCTTCATGGCATACTTTGNTGATAGCTTGA CCGGCGTGGGGCTTGTCGA CCAGATGGGCAACTTCTTCTGCAAAACCCTACTGTTTGTTGCTGTGGCTGGTGTGCTGCTGGTCAGGAAAAACGAGGACATAGAGACAGTGAAGAAGCTCATCGATGAGACGACGTTCTACGACAAGCAATGGCAGGCAACCTGG CAAGATGAGTCCCCTTCTCAGCCCAAGAAATAGCTCTGAAGTGGAATCTGAATCTGAATCCTCCCTATGTTGTATTGTATCACTTCTTTTTGCAGCCCTTTTCTCAACCCATTTATTAGTGAGGCTCAGTACA TTTTGAT GATCTTAATA CCTATGACGTCTTGTAAAAAGTACGAACTCGTTTCTGTGCTAGAGGTTAACGTTGCTGCGGGTTACTTGGTTGAATGTTTTCTTTGTGAGAATTGCTTGTACTAGTTACTCCCTCCGCTTCATATTATAAAATGCTTTGACTCTTTTCTAAAAAAAAAAAAA] [+] EMBL AU057609 [ TGATTGGCTTCTTCATGGCATACTTTGTTGATAGCTTGA CCGGCGTGGGGCTTGTCGA CCAGATGGGCAACTTCTTCTGCAAAACCCTACTGTTTGTTGCTGTGGCTGGTGTGCTGCTGGTCAGGAAAAACGAGGACATAGAGACAGTGAAGAAGCTCATCGATGAGACGACGTTCTACGACAAGCAATGGCAGGCAACCTGG CAAGATGAGTCCCCTTCTCAGCCCAAGAAATAGCTCTGAAGTGGAATCTGAATCTGAATCCTCCCTATGTTGTATTGTATCACTTCTTTTTGCAGCCCTTTTCTCAACCCATTTATTAGTGAGGCTCAGTACA TTTTGATGGATCTTAATA CCTATGACGTCTTGTAAAAAGTACGAACT ] [+] EMBL BI805255 [ acTGGCATACTTTGTTGATAGCTTGACCCGGCGTGGGGCTTGTCGACCCAGATGGGCAACTTCTTCTGCCAAACCCTACTGTTTGTTGCTGTGGCTGGTGTGCTGCTGGTCAGGAAAAACGAGGACATAGAGACAGTGAAGAAGCTCATCGATGAGACGACGTTCTACGACAAGCAATGGCAGGCAACCTGG C AGATGAGTCCCCTTCTCAGCCCCAGAAATAGCTCTGAAGTGGAATCTGAATCTGAATCCTCCCTATGTTGTATTGTATCACTTCTTTTTGCAGCCCTTTTCTCAACCCATTTATTAGTGAGGCTCAGTACACTTTTGAT GATCTTAATACCCTATGACGTCTTGTAAAAAGTACGAACTCGTTTCTGTGCTAGAGGTTAACGTTGCTGCGGGTTAaaaaaaaaa ] [+] EMBL BI798340 [ CTGCAAAA CCTACTGTTTGTTGCTGTGGCTGGTGTGCTGCTGGTCAGGAAAAACGAGGACATAGAGACAGTGAAGAAGCTCATCGATGAGACGACGTT TACGACAA CCATGGCA ACAACCTGGCCAAGATGAGTCCCCTTCTCAGCCCAAGAAATAGCTCTGAAGTGGAATCTGAATCTGAATCCTCCCTATGTTGTATTGTATCACTTC TTTTCCA CCCTTTTC CAACCCATTTATTAGTGAGGC CAGTAC TTTGAG GATCTAAATA CCTAGGACGTC TGTAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||