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Oryza sativa
cluster # 9448 cluster # 9448       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9448#0 length = 2031 sequences # 3  
consensus_9448#1 length = 668 sequences # 2  
consensus_9448#2 length = 586 sequences # 1  

consensusID : consensus_9448#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2031
fasta sequence
                              [GGAACTTGTCCTTGTTGATATTGCTTTAAGAGTTGCCAATAACAGCAGTAATGGAGAGATCAGTTTATCATGCTTTGACCCAGAAGCTCTTTCAATACTTCAGTCACTAGGAAGCAATACGACTGATCCATCAGAGGTTATGGAGAAACTAGCCATGAAATGTGGCGAGGGTCGTGGACGAGCTCTTGTCAGGAGAATAGCAGCAGTTGTTCAAACTGCAAAAGTACTGGGACTCCCATTTTCTGAAGCATTTGAGAAACAGCCAATTGAACTTCTTCAGTTGCTTTCTCTGAAAGCTCAGGATTCTTTTGATGAAGCTAAATTTCTGGTGGAGACACACACCATGCCTGCATCTAGCATTGCAAGAATTCTTGCTGATTCCTTTCTAAAGGGGCTTTTAGCTGCACATCGTGGAGGTTATCTGGATTCCCAAAAGGAAGAAGGCCCTGCACCCCTGTTGTGGAGGTCTAGTGACTTCTTGAAGTGGGCAAAGCTATGTCCATCAGAACCAGAAATTGGCCATGCTTTGATGCGTTTGGTTATGACTGGCCATGAAGTACCACATGCTTGCGAGGTTGAACTCCTAATACTGTCCTACCACTTCTACATGTCTTCTTCTTGTCTCGATGGAG-TGGATGTTCTAGTCACATTTGCAGCTAATAGAGTGGAGTCGTATGTGTCAGAGGGGGATTTTTCTTGTTTAGCTCGCTTGATCACTGGAGTGAGCAATTTTCATTCCTTGAGCTTCATTCTTTCCATCCTTATAGAAAATGGACAATTGGAGTTGTTACTTCAAAAGTACTCTGCAACTGACTCAGCCACTGGGGCACCTGCATCAGTTAGAGGGTTTAGGATGGCTGTTATCACCTCACTGAAACATTTTATCCCAAGTGATGACGACGCTCTTTCTCTGGTATATAAGCACTTTGACATGAAGCATGAGGCTGCTTCTCTCCTTGAGTCACGTGCAGAACAATACATGAACAGCTGGTTATCTCGATATGACAAAGAAAGGAGGAATGATGAGCTCCTTGAGGCTATGCATCACCTTGTTGAGATGGCTGAGGTTCTTTCAACAATTGATGCTGGCCAAAGGACACACCGGGCGTGTGCGCGAGCTTCTCTCCTATCACTTCAGATCCGTATACCTGACCTTCTGTGGATTGGTCTTTCGGAAACCAATGCTCGGCGGATTTTCGTAGAACAATCTAGGTTCCAAGAGGCCCTCATTGTTGCTGAAGCATACAACATAAATCAGCCGATGGAATGGGCTCCAGTTTTTTGGAACCAAATGCTGAAACCAGATCTAATTGAGCAATTTGTGGCTGAGTTTGTGTTGGTGCTGCCCCTGCAGCCACCAATGCTACTCGAGCTTGCAAGATTTTACCGGGCGGAGGTTGCAGCCAGGGGGGACCAGTCACACTTCTCGGTCTGGCTTTCGCCCGGAGGCTTGCCTGCAGAGTGGGTGAAACATCTTGGCAGATCGTTCAGGAGCCTTCTCCGTCGAACGAGGGATATGAGGCTGAGGCTGCAGTTGGCAACTCTTGCAACGGGATTTAGTGACGTTCTTGACGCATGCAATAGTGTTTTGGACAAGGTTCCGGAGAACGCTGGCCCTCTAATCCTGAGGAAGGGCCATGGTGGTACATACCTCCCTCTCATGTAAATCCTTCCATTTTGATCCATCTTGTTCAACTTTCGGCAGACTGAATCTTACAGGAGTTCAGTATATAGTGAGGTGAGAATTTTTCCCGTCCTTTCTTTGGGCCTGCGTTCAGCATTCTAGTTTTTTGATACATATGGATGAAGCCATGGGAGATATTCGGTTTGTATATATACAAGCATTCTGAGTGGATAAGATGAACATAGCCGATTGAGAGTGAGTTTTTGCGGCTTCAGTCGGTGGAAGTTTTCGTGTGGGTTGTAGCGCCGTACTCGTGGTGCCTGATGTCTGTAGTTTGTTGTAAATTCCATTGACCCAACCATGAAATTTTGTACAATTTTCTTCACGTCACTTATGCTTCACAAGAT]

[+] EMBL CF307241             [GGAACTTGTCCTTGTTGATATTGCTTTAAGAGTTGCCAATAACAGCAGTAATGGAGAGATCAGTTTATCATGCTTTGACCCAGAAGCTCTTTCAATACTTCAGTCACTAGGAAGCAATACGACTGATCCATCAGAGGTTATGGAGAAACTAGCCATGAAATGTGGCGAGGGTCGTGGACGAGCTCTTGTCAGGAGAATAGCAGCAGTTGTTCAAACTGCAAAAGTACTGGGACTCCCATTTTCTGAAGCATTTGAGAAACAGCCAATTGAACTTCTTCAGTTGCTTTCTCTGAAAGCTCAGGATTCTTTTGATGAAGCTAAATTTCTGGTGGAGACACACACCATGCCTGCATCTAGCATTGCAAGAATTCTTGCTGATTCCTTTCTAAAGGGGCTTTTAGCTGCACATCGTGGAGGTTATCTGGATTCCCAAAAGGAAGAAGGCCCTGCACCCCTGTTGTGGAGGTCTAGTGACTTCTTGAAGTGGGCAAAGCTATGTCCATCAGAACCAGAAATTGGCCATGCTTTGATGCGTTTGGTTATGACTGGCCATGAAGTACCACATGCTTGCGAGGTTGAACTCCTAATACTGTCCTACCACTTCTACATGTCTTCTTCTTGTCTCGATGGAGTTGGATGTTCTAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB658595             [                                                                                                                                                                          GTCTTGGACGAGCTCTTGTCAGGAGAATAGCAGCAGTTGTTCAAACTGCAAAAGTACTGGGACTCCCATTTTCTGAAGCATTTGAGAAACAGCCAATTGAACTTCTTCAGTTGCTTTCTCTGAAAGCTCAGGATTCTTTTGATGAAGCTAAATTTCTGGTGGAGACACACACCATGCCTGCATCTAGCATTGCAAGAATTCTTGCTGATTCCTTTCTAAAGGGGCTTTTAGCTGCACATCGTGGAGGTTATCTGGATTCCCAAAAGGAAGAAGGCCCTGCACCCCTGTTGTGGAGGTCTAGTGACTTCTTGAAGTGGGCAAAGCTATGTCCATCAGAACCAGAAATTGGCCATGCTTTGATGCGTTTGGTTATGACTGGCCATGAAGTACCACATGCTTGCGAGGTTGAACTCCTAATACTGTCCTACCACTTCTACATGTCTTCTTCTTGTCTCGATGGAG TGGATGTTCTAGTCACATTTGCAGCTAATAGAGTGGAGTCGTATGTGTCAGAGGGGGATTTTTCTTGTTTAGCTCGCTTGATCACTGGAGTGAGCAATTTTCATTCCTTGAGCTTCATTCTTTCCATCCTTATAGAAAATGGACAATTGGAGTTGTTACTTCAAAAGTACTCTGCAACTGACTCAGCCACTGGGGCACCTGCATCAGTTAGAGGGTTTAGGATGGCTGTTATCACCTCACTGAAACATTTTATCCCAAGTGATGACGACGCTCTTTCTCTGGTATATAAGCACTTTGACATGAAGCATGAGGCTGCTTCTCTCCTTGAGTCACGTGCAGAACAATACATGAACAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AK061255             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGTTTAGCTCGCTTGATCACTGGAGTGAGCAATTTTCATTCCTTGAGCTTCATTCTTTCCATCCTTATAGAAAATGGACAATTGGAGTTGTTACTTCAAAAGTACTCTGCAACTGACTCAGCCACTGGGGCACCTGCATCAGTTAGAGGGTTTAGGATGGCTGTTATCACCTCACTGAAACATTTTATCCCAAGTGATGACGACGCTCTTTCTCTGGTATATAAGCACTTTGACATGAAGCATGAGGCTGCTTCTCTCCTTGAGTCACGTGCAGAACAATACATGAACAGCTGGTTATCTCGATATGACAAAGAAAGGAGGAATGATGAGCTCCTTGAGGCTATGCATCACCTTGTTGAGATGGCTGAGGTTCTTTCAACAATTGATGCTGGCCAAAGGACACACCGGGCGTGTGCGCGAGCTTCTCTCCTATCACTTCAGATCCGTATACCTGACCTTCTGTGGATTGGTCTTTCGGAAACCAATGCTCGGCGGATTTTCGTAGAACAATCTAGGTTCCAAGAGGCCCTCATTGTTGCTGAAGCATACAACATAAATCAGCCGATGGAATGGGCTCCAGTTTTTTGGAACCAAATGCTGAAACCAGATCTAATTGAGCAATTTGTGGCTGAGTTTGTGTTGGTGCTGCCCCTGCAGCCACCAATGCTACTCGAGCTTGCAAGATTTTACCGGGCGGAGGTTGCAGCCAGGGGGGACCAGTCACACTTCTCGGTCTGGCTTTCGCCCGGAGGCTTGCCTGCAGAGTGGGTGAAACATCTTGGCAGATCGTTCAGGAGCCTTCTCCGTCGAACGAGGGATATGAGGCTGAGGCTGCAGTTGGCAACTCTTGCAACGGGATTTAGTGACGTTCTTGACGCATGCAATAGTGTTTTGGACAAGGTTCCGGAGAACGCTGGCCCTCTAATCCTGAGGAAGGGCCATGGTGGTACATACCTCCCTCTCATGTAAATCCTTCCATTTTGATCCATCTTGTTCAACTTTCGGCAGACTGAATCTTACAGGAGTTCAGTATATAGTGAGGTGAGAATTTTTCCCGTCCTTTCTTTGGGCCTGCGTTCAGCATTCTAGTTTTTTGATACATATGGATGAAGCCATGGGAGATATTCGGTTTGTATATATACAAGCATTCTGAGTGGATAAGATGAACATAGCCGATTGAGAGTGAGTTTTTGCGGCTTCAGTCGGTGGAAGTTTTCGTGTGGGTTGTAGCGCCGTACTCGTGGTGCCTGATGTCTGTAGTTTGTTGTAAATTCCATTGACCCAACCATGAAATTTTGTACAATTTTCTTCACGTCACTTATGCTTCACAAGAT]


>consensus_9448#0 GGAACTTGTCCTTGTTGATATTGCTTTAAGAGTTGCCAATAACAGCAGTAATGGAGAGAT CAGTTTATCATGCTTTGACCCAGAAGCTCTTTCAATACTTCAGTCACTAGGAAGCAATAC GACTGATCCATCAGAGGTTATGGAGAAACTAGCCATGAAATGTGGCGAGGGTCGTGGACG AGCTCTTGTCAGGAGAATAGCAGCAGTTGTTCAAACTGCAAAAGTACTGGGACTCCCATT TTCTGAAGCATTTGAGAAACAGCCAATTGAACTTCTTCAGTTGCTTTCTCTGAAAGCTCA GGATTCTTTTGATGAAGCTAAATTTCTGGTGGAGACACACACCATGCCTGCATCTAGCAT TGCAAGAATTCTTGCTGATTCCTTTCTAAAGGGGCTTTTAGCTGCACATCGTGGAGGTTA TCTGGATTCCCAAAAGGAAGAAGGCCCTGCACCCCTGTTGTGGAGGTCTAGTGACTTCTT GAAGTGGGCAAAGCTATGTCCATCAGAACCAGAAATTGGCCATGCTTTGATGCGTTTGGT TATGACTGGCCATGAAGTACCACATGCTTGCGAGGTTGAACTCCTAATACTGTCCTACCA CTTCTACATGTCTTCTTCTTGTCTCGATGGAGTGGATGTTCTAGTCACATTTGCAGCTAA TAGAGTGGAGTCGTATGTGTCAGAGGGGGATTTTTCTTGTTTAGCTCGCTTGATCACTGG AGTGAGCAATTTTCATTCCTTGAGCTTCATTCTTTCCATCCTTATAGAAAATGGACAATT GGAGTTGTTACTTCAAAAGTACTCTGCAACTGACTCAGCCACTGGGGCACCTGCATCAGT TAGAGGGTTTAGGATGGCTGTTATCACCTCACTGAAACATTTTATCCCAAGTGATGACGA CGCTCTTTCTCTGGTATATAAGCACTTTGACATGAAGCATGAGGCTGCTTCTCTCCTTGA GTCACGTGCAGAACAATACATGAACAGCTGGTTATCTCGATATGACAAAGAAAGGAGGAA TGATGAGCTCCTTGAGGCTATGCATCACCTTGTTGAGATGGCTGAGGTTCTTTCAACAAT TGATGCTGGCCAAAGGACACACCGGGCGTGTGCGCGAGCTTCTCTCCTATCACTTCAGAT CCGTATACCTGACCTTCTGTGGATTGGTCTTTCGGAAACCAATGCTCGGCGGATTTTCGT AGAACAATCTAGGTTCCAAGAGGCCCTCATTGTTGCTGAAGCATACAACATAAATCAGCC GATGGAATGGGCTCCAGTTTTTTGGAACCAAATGCTGAAACCAGATCTAATTGAGCAATT TGTGGCTGAGTTTGTGTTGGTGCTGCCCCTGCAGCCACCAATGCTACTCGAGCTTGCAAG ATTTTACCGGGCGGAGGTTGCAGCCAGGGGGGACCAGTCACACTTCTCGGTCTGGCTTTC GCCCGGAGGCTTGCCTGCAGAGTGGGTGAAACATCTTGGCAGATCGTTCAGGAGCCTTCT CCGTCGAACGAGGGATATGAGGCTGAGGCTGCAGTTGGCAACTCTTGCAACGGGATTTAG TGACGTTCTTGACGCATGCAATAGTGTTTTGGACAAGGTTCCGGAGAACGCTGGCCCTCT AATCCTGAGGAAGGGCCATGGTGGTACATACCTCCCTCTCATGTAAATCCTTCCATTTTG ATCCATCTTGTTCAACTTTCGGCAGACTGAATCTTACAGGAGTTCAGTATATAGTGAGGT GAGAATTTTTCCCGTCCTTTCTTTGGGCCTGCGTTCAGCATTCTAGTTTTTTGATACATA TGGATGAAGCCATGGGAGATATTCGGTTTGTATATATACAAGCATTCTGAGTGGATAAGA TGAACATAGCCGATTGAGAGTGAGTTTTTGCGGCTTCAGTCGGTGGAAGTTTTCGTGTGG GTTGTAGCGCCGTACTCGTGGTGCCTGATGTCTGTAGTTTGTTGTAAATTCCATTGACCC AACCATGAAATTTTGTACAATTTTCTTCACGTCACTTATGCTTCACAAGAT



consensusID : consensus_9448#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 668
fasta sequence
                              [GCCAAAGGCCCAGCCAAGGGGGGACCAGTCACACTTTTCGGTCTGGCTTTCGCCCGGAGCGTTGCCTGCAGAGTGGGTGAAACATCTTGCGCAGATCGTTCAGGAGCCTTATCCGTCGAACGAGGGATATGAGGCTGAGGTTGCAGTTGGCAACTCTTGCAACGGGATTTAGGGACGTTCTTGACGCATGCAATAGTGTTTTGGACAAGGTTCCGGAGAACGCTGGCCCTCTAATCCTGAGGAAGGGCCATGGTGGTACATACCTCCCTCTCATGTAAATCCTTCCATTTTGATCCATCTTGTTCAACTTTCGGCAGACTGAATCTTACAGGAGTTCAGTATATAGTGAGGTGAGAATTTTTCCCGTCCTTTCTTTGGGCCTGCGTTCAGCATTCTAGTTTTTTGATACATATGGATGAAGCCATGGGAGATCTTCGGTTTGTATATATACAAGCATTCTGAGTGGATAAGATGAACATAGCCGATTGAGAGTGAGTTTTTGCGGCTTCAGTCGGTGGAAGTTTTCGTGTGGGTTGTAGCGCCGTACTCGTGGTGCCTGATGTCTGTAGTTTGTTGTAAATTCCATTGACCCAACCATGAAATTTGTACAATTTTCTTCACGTCACTTATGCTTCCCAAGATTTTCCTTGATAAAAAAAAAAAAAAAA]

[-] EMBL CA763597             [GCCAAAGGCCCAGCCAAGGGGGGACCAGTCACACTTTTCGGTCTGGCTTTCGCCCGGAGCGTTGCCTGCAGAGTGGGTGAAACATCTTGCGCAGATCGTTCAGGAGCCTTATCCGTCGAACGAGGGATATGAGGCTGAGGTTGCAGTTGGCAACTCTTGCAACGGGATTTAGGGACGTTCTTGACGCATGCAATAGTGTTTTGGACAAGGTTCCGGAGAACGCTGGCCCTCTAATCCTGAGGAAGGGCCATGGTGGTACATACCTCCCTCTCATGTAAATCCTTCCATTTTGATCCATCTTGTTCAACTTTCGGCAGACTGAATCTTACAGGAGTTCAGTATATAGTGAGGTGAGAATTTTTCCCGTCCTTTCTTTGGGCCTGCGTTCAGCATTCTAGTTTTTTGATACATATGGATGAAGCCATGGGAGATCTTCGGTTTGTATATATACAAGCATTCTGAGTGGATAAGATGAACATAGCCGATTGAGAGTGAGTTTTTGCGGCTTCAGTCGGTGGAAGTTTTCGTGTGGGTTGTAGCGCCGTACTCGTGGTGCCTGATGTCTGTAGTTTGTTGTAAATTCCATTGACCCAACCATGAAATTTGTACAATTTTCTTCACGTCACTTATGCTTCCCAAGATTTTCCTTGATAAAAAAAAAAAAAAAA]
[-] EMBL CA763596             [GCCAAAGGCCCAGCCAAGGGGGGACCAGTCACACTTTTCGGTCTGGCTTTCGCCCGGAGCGTTGCCTGCAGAGTGGGTGAAACATCTTGCGCAGATCGTTCAGGAGCCTTATCCGTCGAACGAGGGATATGAGGCTGAGGTTGCAGTTGGCAACTCTTGCAACGGGATTTAGGGACGTTCTTGACGCATGCAATAGTGTTTTGGACAAGGTTCCGGAGAACGCTGGCCCTCTAATCCTGAGGAAGGGCCATGGTGGTACATACCTCCCTCTCATGTAAATCCTTCCATTTTGATCCATCTTGTTCAACTTTCGGCAGACTGAATCTTACAGGAGTTCAGTATATAGTGAGGTGAGAATTTTTCCCGTCCTTTCTTTGGGCCTGCGTTCAGCATTCTAGTTTTTTGATACATATGGATGAAGCCATGGGAGATCTTCGGTTTGTATATATACAAGCATTCTGAGTGGATAAGATGAACATAGCCGATTGAGAGTGAGTTTTTGCGGCTTCAGTCGGTGGAAGTTTTCGTGTGGGTTGTAGCGCCGTACTCGTGGTGCCTGATGTCTGTAGTTTGTTGTAAATTCCATTGACCCAACCATGAAATTTGTACAATTTTCTTCACGTCACTTATGCTTCCCAAGATTTTCCTTGATAAAAAAAAAAAAAAAA]


>consensus_9448#1 GCCAAAGGCCCAGCCAAGGGGGGACCAGTCACACTTTTCGGTCTGGCTTTCGCCCGGAGC GTTGCCTGCAGAGTGGGTGAAACATCTTGCGCAGATCGTTCAGGAGCCTTATCCGTCGAA CGAGGGATATGAGGCTGAGGTTGCAGTTGGCAACTCTTGCAACGGGATTTAGGGACGTTC TTGACGCATGCAATAGTGTTTTGGACAAGGTTCCGGAGAACGCTGGCCCTCTAATCCTGA GGAAGGGCCATGGTGGTACATACCTCCCTCTCATGTAAATCCTTCCATTTTGATCCATCT TGTTCAACTTTCGGCAGACTGAATCTTACAGGAGTTCAGTATATAGTGAGGTGAGAATTT TTCCCGTCCTTTCTTTGGGCCTGCGTTCAGCATTCTAGTTTTTTGATACATATGGATGAA GCCATGGGAGATCTTCGGTTTGTATATATACAAGCATTCTGAGTGGATAAGATGAACATA GCCGATTGAGAGTGAGTTTTTGCGGCTTCAGTCGGTGGAAGTTTTCGTGTGGGTTGTAGC GCCGTACTCGTGGTGCCTGATGTCTGTAGTTTGTTGTAAATTCCATTGACCCAACCATGA AATTTGTACAATTTTCTTCACGTCACTTATGCTTCCCAAGATTTTCCTTGATAAAAAAAA AAAAAAAA



consensusID : consensus_9448#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 586
fasta sequence
                              [GGTGAAACATTTTGGCAGATCGTTCAGGAGCCTTTTCCGTCGAACGAGGGATATGAGGTTGAGGCTGCAGTTGGCAATTCTTGCAACGGGATTTAGTGAGGTTTTTGACGCATGCAATAGTGTTTTGGACAAGGTTCGGGAGAACGCTGGCCCTTTAATCCTGAGGAAGGGCCAGGGGGGTACATACCTCCCTTTAAGGTAAATCTTTCCATTTGGATCCATTTTGTTCAACTTTGGGCAGACGGAATTTTACAGGAGTTCAGTATATAGTGGGGGGAGAATTTTTCCGGTCCTTTTTTTGGCCCTGGGTTCAGCATTTTAGTTTTTTGATACATATGGAGGAAGCCATGGGAGATATTCGGTTTGTATATATACAAGCATTTTGAGTGGATAAGATGAACATAGCCGTTTGAGAGGGAGTTTTTGGGGCTTCAGTCGGTGGAAGTTTTTGTGGGGGTTGTAGCCCCGTATTCGTGGGGCCAGATGTTTGTAGTTTGTTGTAAATTCCATTGACCCACCCATGAAATTTGGTACAATTTTGTTCCCGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAA]

[-] EMBL CB658596             [GGTGAAACATTTTGGCAGATCGTTCAGGAGCCTTTTCCGTCGAACGAGGGATATGAGGTTGAGGCTGCAGTTGGCAATTCTTGCAACGGGATTTAGTGAGGTTTTTGACGCATGCAATAGTGTTTTGGACAAGGTTCGGGAGAACGCTGGCCCTTTAATCCTGAGGAAGGGCCAGGGGGGTACATACCTCCCTTTAAGGTAAATCTTTCCATTTGGATCCATTTTGTTCAACTTTGGGCAGACGGAATTTTACAGGAGTTCAGTATATAGTGGGGGGAGAATTTTTCCGGTCCTTTTTTTGGCCCTGGGTTCAGCATTTTAGTTTTTTGATACATATGGAGGAAGCCATGGGAGATATTCGGTTTGTATATATACAAGCATTTTGAGTGGATAAGATGAACATAGCCGTTTGAGAGGGAGTTTTTGGGGCTTCAGTCGGTGGAAGTTTTTGTGGGGGTTGTAGCCCCGTATTCGTGGGGCCAGATGTTTGTAGTTTGTTGTAAATTCCATTGACCCACCCATGAAATTTGGTACAATTTTGTTCCCGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAA]


>consensus_9448#2 GGTGAAACATTTTGGCAGATCGTTCAGGAGCCTTTTCCGTCGAACGAGGGATATGAGGTT GAGGCTGCAGTTGGCAATTCTTGCAACGGGATTTAGTGAGGTTTTTGACGCATGCAATAG TGTTTTGGACAAGGTTCGGGAGAACGCTGGCCCTTTAATCCTGAGGAAGGGCCAGGGGGG TACATACCTCCCTTTAAGGTAAATCTTTCCATTTGGATCCATTTTGTTCAACTTTGGGCA GACGGAATTTTACAGGAGTTCAGTATATAGTGGGGGGAGAATTTTTCCGGTCCTTTTTTT GGCCCTGGGTTCAGCATTTTAGTTTTTTGATACATATGGAGGAAGCCATGGGAGATATTC GGTTTGTATATATACAAGCATTTTGAGTGGATAAGATGAACATAGCCGTTTGAGAGGGAG TTTTTGGGGCTTCAGTCGGTGGAAGTTTTTGTGGGGGTTGTAGCCCCGTATTCGTGGGGC CAGATGTTTGTAGTTTGTTGTAAATTCCATTGACCCACCCATGAAATTTGGTACAATTTT GTTCCCGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9448#0      GGAACTTGTCCTTGTTGATATTGCTTTAAGAGTTGCCAATAACAGCAGTAATGGAGAGAT 60
consensus_9448#1      ------------------------------------------------------------
consensus_9448#2      ------------------------------------------------------------
                                                                                  

consensus_9448#0      CAGTTTATCATGCTTTGACCCAGAAGCTCTTTCAATACTTCAGTCACTAGGAAGCAATAC 120
consensus_9448#1      ------------------------------------------------------------
consensus_9448#2      ------------------------------------------------------------
                                                                                  

consensus_9448#0      GACTGATCCATCAGAGGTTATGGAGAAACTAGCCATGAAATGTGGCGAGGGTCGTGGACG 180
consensus_9448#1      ------------------------------------------------------------
consensus_9448#2      ------------------------------------------------------------
                                                                                  

consensus_9448#0      AGCTCTTGTCAGGAGAATAGCAGCAGTTGTTCAAACTGCAAAAGTACTGGGACTCCCATT 240
consensus_9448#1      ------------------------------------------------------------
consensus_9448#2      ------------------------------------------------------------
                                                                                  

consensus_9448#0      TTCTGAAGCATTTGAGAAACAGCCAATTGAACTTCTTCAGTTGCTTTCTCTGAAAGCTCA 300
consensus_9448#1      ------------------------------------------------------------
consensus_9448#2      ------------------------------------------------------------
                                                                                  

consensus_9448#0      GGATTCTTTTGATGAAGCTAAATTTCTGGTGGAGACACACACCATGCCTGCATCTAGCAT 360
consensus_9448#1      ------------------------------------------------------------
consensus_9448#2      ------------------------------------------------------------
                                                                                  

consensus_9448#0      TGCAAGAATTCTTGCTGATTCCTTTCTAAAGGGGCTTTTAGCTGCACATCGTGGAGGTTA 420
consensus_9448#1      ------------------------------------------------------------
consensus_9448#2      ------------------------------------------------------------
                                                                                  

consensus_9448#0      TCTGGATTCCCAAAAGGAAGAAGGCCCTGCACCCCTGTTGTGGAGGTCTAGTGACTTCTT 480
consensus_9448#1      ------------------------------------------------------------
consensus_9448#2      ------------------------------------------------------------
                                                                                  

consensus_9448#0      GAAGTGGGCAAAGCTATGTCCATCAGAACCAGAAATTGGCCATGCTTTGATGCGTTTGGT 540
consensus_9448#1      ------------------------------------------------------------
consensus_9448#2      ------------------------------------------------------------
                                                                                  

consensus_9448#0      TATGACTGGCCATGAAGTACCACATGCTTGCGAGGTTGAACTCCTAATACTGTCCTACCA 600
consensus_9448#1      ------------------------------------------------------------
consensus_9448#2      ------------------------------------------------------------
                                                                                  

consensus_9448#0      CTTCTACATGTCTTCTTCTTGTCTCGATGGAGTGGATGTTCTAGTCACATTTGCAGCTAA 660
consensus_9448#1      ------------------------------------------------------------
consensus_9448#2      ------------------------------------------------------------
                                                                                  

consensus_9448#0      TAGAGTGGAGTCGTATGTGTCAGAGGGGGATTTTTCTTGTTTAGCTCGCTTGATCACTGG 720
consensus_9448#1      ------------------------------------------------------------
consensus_9448#2      ------------------------------------------------------------
                                                                                  

consensus_9448#0      AGTGAGCAATTTTCATTCCTTGAGCTTCATTCTTTCCATCCTTATAGAAAATGGACAATT 780
consensus_9448#1      ------------------------------------------------------------
consensus_9448#2      ------------------------------------------------------------
                                                                                  

consensus_9448#0      GGAGTTGTTACTTCAAAAGTACTCTGCAACTGACTCAGCCACTGGGGCACCTGCATCAGT 840
consensus_9448#1      ------------------------------------------------------------
consensus_9448#2      ------------------------------------------------------------
                                                                                  

consensus_9448#0      TAGAGGGTTTAGGATGGCTGTTATCACCTCACTGAAACATTTTATCCCAAGTGATGACGA 900
consensus_9448#1      ------------------------------------------------------------
consensus_9448#2      ------------------------------------------------------------
                                                                                  

consensus_9448#0      CGCTCTTTCTCTGGTATATAAGCACTTTGACATGAAGCATGAGGCTGCTTCTCTCCTTGA 960
consensus_9448#1      ------------------------------------------------------------
consensus_9448#2      ------------------------------------------------------------
                                                                                  

consensus_9448#0      GTCACGTGCAGAACAATACATGAACAGCTGGTTATCTCGATATGACAAAGAAAGGAGGAA 1020
consensus_9448#1      ------------------------------------------------------------
consensus_9448#2      ------------------------------------------------------------
                                                                                  

consensus_9448#0      TGATGAGCTCCTTGAGGCTATGCATCACCTTGTTGAGATGGCTGAGGTTCTTTCAACAAT 1080
consensus_9448#1      ------------------------------------------------------------
consensus_9448#2      ------------------------------------------------------------
                                                                                  

consensus_9448#0      TGATGCTGGCCAAAGGACACACCGGGCGTGTGCGCGAGCTTCTCTCCTATCACTTCAGAT 1140
consensus_9448#1      ------------------------------------------------------------
consensus_9448#2      ------------------------------------------------------------
                                                                                  

consensus_9448#0      CCGTATACCTGACCTTCTGTGGATTGGTCTTTCGGAAACCAATGCTCGGCGGATTTTCGT 1200
consensus_9448#1      ------------------------------------------------------------
consensus_9448#2      ------------------------------------------------------------
                                                                                  

consensus_9448#0      AGAACAATCTAGGTTCCAAGAGGCCCTCATTGTTGCTGAAGCATACAACATAAATCAGCC 1260
consensus_9448#1      ------------------------------------------------------------
consensus_9448#2      ------------------------------------------------------------
                                                                                  

consensus_9448#0      GATGGAATGGGCTCCAGTTTTTTGGAACCAAATGCTGAAACCAGATCTAATTGAGCAATT 1320
consensus_9448#1      ------------------------------------------------------------
consensus_9448#2      ------------------------------------------------------------
                                                                                  

consensus_9448#0      TGTGGCTGAGTTTGTGTTGGTGCTGCCCCTGCAGCCACCAATGCTACTCGAGCTTGCAAG 1380
consensus_9448#1      ------------------------------------------------------------
consensus_9448#2      ------------------------------------------------------------
                                                                                  

consensus_9448#0      ATTTTACCGGGCGGAGGTTGCAGCCA-GGGGGGACCAGTCACACTTCTCGGTCTGGCTTT 1439
consensus_9448#1      ----------GCCAAAGGCCCAGCCAAGGGGGGACCAGTCACACTTTTCGGTCTGGCTTT 50
consensus_9448#2      ------------------------------------------------------------
                                                                                  

consensus_9448#0      CGCCCGGAGGCTTGCCTGCAGAGTGGGTGAAACATCTTG-GCAGATCGTTCAGGAGCCTT 1498
consensus_9448#1      CGCCCGGAGCGTTGCCTGCAGAGTGGGTGAAACATCTTGCGCAGATCGTTCAGGAGCCTT 110
consensus_9448#2      -------------------------GGTGAAACATTTTG-GCAGATCGTTCAGGAGCCTT 34
                                               ********** *** ********************

consensus_9448#0      CTCCGTCGAACGAGGGATATGAGGCTGAGGCTGCAGTTGGCAACTCTTGCAACGGGATTT 1558
consensus_9448#1      ATCCGTCGAACGAGGGATATGAGGCTGAGGTTGCAGTTGGCAACTCTTGCAACGGGATTT 170
consensus_9448#2      TTCCGTCGAACGAGGGATATGAGGTTGAGGCTGCAGTTGGCAATTCTTGCAACGGGATTT 94
                       *********************** ***** ************ ****************

consensus_9448#0      AGTGACGTTCTTGACGCATGCAATAGTGTTTTGGACAAGGTTCCGGAGAACGCTGGCCCT 1618
consensus_9448#1      AGGGACGTTCTTGACGCATGCAATAGTGTTTTGGACAAGGTTCCGGAGAACGCTGGCCCT 230
consensus_9448#2      AGTGAGGTTTTTGACGCATGCAATAGTGTTTTGGACAAGGTTCGGGAGAACGCTGGCCCT 154
                      ** ** *** ********************************* ****************

consensus_9448#0      CTAATCCTGAGGAAGGGCCATGGTGGTACATACCTCCCTCTCATGTAAATCCTTCCATTT 1678
consensus_9448#1      CTAATCCTGAGGAAGGGCCATGGTGGTACATACCTCCCTCTCATGTAAATCCTTCCATTT 290
consensus_9448#2      TTAATCCTGAGGAAGGGCCAGGGGGGTACATACCTCCCTTTAAGGTAAATCTTTCCATTT 214
                       ******************* ** *************** * * ******* ********

consensus_9448#0      TGATCCATCTTGTTCAACTTTCGGCAGACTGAATCTTACAGGAGTTCAGTATATAGTGAG 1738
consensus_9448#1      TGATCCATCTTGTTCAACTTTCGGCAGACTGAATCTTACAGGAGTTCAGTATATAGTGAG 350
consensus_9448#2      GGATCCATTTTGTTCAACTTTGGGCAGACGGAATTTTACAGGAGTTCAGTATATAGTGGG 274
                       ******* ************ ******* **** *********************** *

consensus_9448#0      GTGAGAATTTTTCCCGTCCTTTCTTTGGGCCTGCGTTCAGCATTCTAGTTTTTTGATACA 1798
consensus_9448#1      GTGAGAATTTTTCCCGTCCTTTCTTTGGGCCTGCGTTCAGCATTCTAGTTTTTTGATACA 410
consensus_9448#2      GGGAGAATTTTTCCGGTCCTTTTTTTGGCCCTGGGTTCAGCATTTTAGTTTTTTGATACA 334
                      * ************ ******* ***** **** ********** ***************

consensus_9448#0      TATGGATGAAGCCATGGGAGATATTCGGTTTGTATATATACAAGCATTCTGAGTGGATAA 1858
consensus_9448#1      TATGGATGAAGCCATGGGAGATCTTCGGTTTGTATATATACAAGCATTCTGAGTGGATAA 470
consensus_9448#2      TATGGAGGAAGCCATGGGAGATATTCGGTTTGTATATATACAAGCATTTTGAGTGGATAA 394
                      ****** *************** ************************* ***********

consensus_9448#0      GATGAACATAGCCGATTGAGAGTGAGTTTTTGCGGCTTCAGTCGGTGGAAGTTTTCGTGT 1918
consensus_9448#1      GATGAACATAGCCGATTGAGAGTGAGTTTTTGCGGCTTCAGTCGGTGGAAGTTTTCGTGT 530
consensus_9448#2      GATGAACATAGCCGTTTGAGAGGGAGTTTTTGGGGCTTCAGTCGGTGGAAGTTTTTGTGG 454
                      ************** ******* ********* ********************** *** 

consensus_9448#0      GGGTTGTAGCGCCGTACTCGTGGTGCCTGATGTCTGTAGTTTGTTGTAAATTCCATTGAC 1978
consensus_9448#1      GGGTTGTAGCGCCGTACTCGTGGTGCCTGATGTCTGTAGTTTGTTGTAAATTCCATTGAC 590
consensus_9448#2      GGGTTGTAGCCCCGTATTCGTGGGGCCAGATGTTTGTAGTTTGTTGTAAATTCCATTGAC 514
                      ********** ***** ****** *** ***** **************************

consensus_9448#0      CCAACCATGAAATTTTGTACAATTTTCTTCACGTCACTTATGCTTCACAAGAT------- 2031
consensus_9448#1      CCAACCATGAAATTT-GTACAATTTTCTTCACGTCACTTATGCTTCCCAAGATTTTCCTT 649
consensus_9448#2      CCACCCATGAAATTTGGTACAATTTTGTTCCCGTCAAAAAAAAAAAAAAAAAAAAAAAAA 574
                      *** *********** ********** *** *****   *        ** *        

consensus_9448#0      -------------------
consensus_9448#1      GATAAAAAAAAAAAAAAAA 668
consensus_9448#2      AAAAAAAAGGAA------- 586
                                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)