cluster # 9477

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Oryza sativa
cluster # 9477 cluster # 9477 Sequences # 6 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9477#0 length = 529 sequences # 6

consensusID : consensus_9477#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 529
fasta sequence

                              [CCCTGAAGAGGCCAAG-AAGTTATGGGAGAGGAGGCAGCCATGGCCACCATGGAGAGCGCCTACCATGATGAGCTTGCTCCGGCGGCGGCGCCGGCGCCGGCGAAGGGAGGAGGGAGCAAGAAGAAGAGGAAGCAGCAGAAGAGGGAGGAGAAGAGGAAGGAGTGCAGGCTGGTGAGCTACCACGAGCTGCCGGACTACATGAAGGAGAACGAGTTCATCCTCGACTACTACCGCTCCGAGTGGCCCATCCTCAATGCCCTCCTCAGCCTCTTCTCCTGGCACAACGAGACCATCAACATCTGGACGCATCTTCTTGGGTTCGTGCTGTTCTTCGGCCTCACCGTCCTGCATCTTGGCCAGTACTTCCCCCAGGTTGCTGATC-TCATCGGAC-ACCTCTCCT-GGCCAA-TCTCAAAGGTTGCTGAAAA-TGTCTCCAGTAACATTGGAGATGTCCTCTCTGGCGCGGCGTCGTTCATGCAGGCGAGCCCGGCG-TCGAGCGCCGGCGCCATGGCGGCGGNGTGNCCGGTGACGG]

[+] EMBL AU070359             [CCCTGAAGAGGCCAAG AAGTTATGGGAGAGGAGGCAGCCATGGCCACCATGGAGAGCGCCTACCATGATGAGCTTGCTCCGGCGGCGGCGCCGGCGCCGGCGAAGGGAGGAGGGAGCAAGAAGAAGAGGAAGCAGCAGAAGAGGGAGGAGAAGAGGAAGGAGTGCAGGCTGGTGAGCTACCACGAGCTGCCGGACTACATGAAGGAGAACGAGTTCATCCTCGACTACTACCGCTCCGAGTGGCCCATCCTCAATGCCCTCCTCAGCCTCTTCTCCTGGCACAACGAGACCATCAACATCTGGACGCATCTTCTTGGGTTCGTGCTGTTCTTCGGCCTCACCGTCCTGCATCTTGGCCAGTACTTCCCCCAGGTTGCTGATC TCATCGGAC ACCTCTCCT GGCCAA TCTCAAAGGTTGCTGAAAA TGTCTCCAGTAACATTGGAGATGTCCTCTCTGGCGCGGCGTCGTTCATGCAGGCGAGCCCGGCGTTCGAGCGCCGGCGCCATGGCGGCGGNGTGNCC        ]
[+] EMBL OSS14931A            [   TGAAGAGGCCAAGTAAGTTATGGGAGAGGAGGCAGCCATGGCCACCATGGAGAGCGCCTACCATGATGAGCTTGCTCCGGCGGCGGCGCNGCNGCCGGCGAAGGGAGGAGGGAGCAAGAAGAAGAGGAAGCAGCAGAAGAGGGAGGAGAAGAGGAAGGAGTNCAGGCTGGTGAGCTACCACGAGCTGCCGGACTACATGAAGGAGAACGAGTTCATCCTCGACTACTACCGCTCCGAGTNGCCCATCCTCAATTCCCTCCTCAGCCTCTTCTCCTGGCACAACGAGACCATCAACATCTGGACGCATCTTCTTGGGTTCGTGCTGTTCTTCGGCCTCACCGTCCTGCATCTTGGNCAGTACTTTCCCCAGGTTNCTGATCTTCATCGGACAACTTTTCCTGGGCCAATTCTCAAAGGTTTCTGAAAATTGTCTCCAG                                                                                                ]
[+] EMBL OSC7851              [                        GGGAGAGGAGGCAGCCATGGCCACCATGGAGAGCGCCTACCATGATGAGCTTGCTCCGGCGGCGGCGCNGNCGCCGGCGAAGGGAGGAGGGAGCAAGAAGAAGAGGAAGCAGCAGAAGAGGGAGGAGAAGAGGAAGGAGTGCAGGCTGGTGAGCTACCACGAGCTGCCGGACTACATGAAGGAGAACGAGTTCATCCTCGACTACTACCGCTCCGAGTGGCCCATCCTCAATGCCCTCCTCAGCCTCTTCTCCTGGCACAACGAGACCATCAACATCTGGACGCATCTTCTTGGGTTCGTGCTGTTCTTCGGCCTCACCGTCCTGCATCTTNGCCAGTACTT CCCCAGGTTGCTGATC TNATCGGAC AACTTTCCT GGCCAA TNTCAAAGGT                                                                                                                   ]
[+] EMBL CB657884             [                                   CAGCCATGGCCACCATGGAGAGCGCCTACCATGATGAGCTTGCTCCGGCGGCGGCGCCGGCGCCGGCGAAGGGAGGAGGGAGCAAGAAGAAGAGGAAGCAGCAGAAGAGGGAGGAGAAGAGGAAGGAGTGCAGGCTGGTGAGCTACCACGAGCTGCCGGACTACATGAAGGAGAACGAGTTCATCCTCGACTACTACCGCTCCGAGTGGCCCATCCTCAATGCCCTCCTCAGCCTCTTCTCCTGGCACAACGAGACCATCAACATCTGGACGCATCTTCTTGGGTTCGTGCTGTTCTTTGGCCTCACCGTCCTGCATCTTGGCCAGTACTTCCCCCAGGTTGCTGATC TCATCGGAC ACCTCTCCT GGCCAA TCTCAAAGGTTGCTGAAAA TGTCTCCAGTAACATTGGAGATGTCCTCTCTGGCGCGGCGTCGTTCATGCAGGCGAGCCCGGCG TCTAGCGCCGGCGCCATGGCGGCGGCGGGGACGGTGACGG]
[+] EMBL AU197944             [                                                                                                                                            AGAGGGAGGAGAAGAGGAAGGAGTGCAGGCTGGTGAGCTACCACGAGCTGCCGGACTACATGAAGGAGAACGAGTTCATCCTCGACTACTACCGCTCCGAGTGGCCCATCCTCAATGCCCTCCTCAGCCTCTTCTCCTGGCACAACGAGACCATCAACATCTGGACGCATCTTCTTGGGTTCGTGCTGTTCTTCGGCCTCACCGTCCTGCATCTTGGCCAGTACTTCCCCCAGGTTGCTGATC TCATCGGAC ACCTCTCCT GGCCAA TCTCAAAGGTTGCTGAAAA TGTCTCCAGTAACATTGGAGATGTCCTCTCTGGCGCGGCGTCGTTCATGCAGGCGAGCCCGGCG TCNAGCGCCG                              ]
[+] EMBL CB643163             [                                                                                                                                                                                                     ACATGATGGAGAACGAGTTCATCCTCGACTACTACCGCTCCGAGTGGCCCATCCTCAATGCCCTCTTCAGCCTCTTCTCCTGGCACAACTAGACCATCAACTTCTGGACGCATCTTCTTGGGTTCGTGCTGTTCTTCGGCCTCACCGTCCTGCATCTTGGCCAGTACTTCCCCCTGGTTGCTGATC TCATCGGAC ACCTCTCCT GGCCAA TCTCTAAGGTTGCTGAAAA TGTCTCCACTAACATTGGTGATG                                                                                  ]




>consensus_9477#0
CCCTGAAGAGGCCAAGAAGTTATGGGAGAGGAGGCAGCCATGGCCACCATGGAGAGCGCC
TACCATGATGAGCTTGCTCCGGCGGCGGCGCCGGCGCCGGCGAAGGGAGGAGGGAGCAAG
AAGAAGAGGAAGCAGCAGAAGAGGGAGGAGAAGAGGAAGGAGTGCAGGCTGGTGAGCTAC
CACGAGCTGCCGGACTACATGAAGGAGAACGAGTTCATCCTCGACTACTACCGCTCCGAG
TGGCCCATCCTCAATGCCCTCCTCAGCCTCTTCTCCTGGCACAACGAGACCATCAACATC
TGGACGCATCTTCTTGGGTTCGTGCTGTTCTTCGGCCTCACCGTCCTGCATCTTGGCCAG
TACTTCCCCCAGGTTGCTGATCTCATCGGACACCTCTCCTGGCCAATCTCAAAGGTTGCT
GAAAATGTCTCCAGTAACATTGGAGATGTCCTCTCTGGCGCGGCGTCGTTCATGCAGGCG
AGCCCGGCGTCGAGCGCCGGCGCCATGGCGGCGGNGTGNCCGGTGACGG

clustalw multiple alignements is not computed in this case