These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9489#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1479 fasta sequence [CCCTCCTCTTGCGTTCTCGCCTCGGTCTCCAACTCTGCAACCACCGCCGTCTCTTCTCCAGATCTCCACCGCGCCATGGACGCCGCACCCACCGCGCCGCCGGCGGCGTCGGCCGACGACGAGATCGTGTACGAGTCGATGCCCTGCATCCGCATCTACAAGAACCGCGTGGAGCGCTACTTCGGCTCCGAGTTCGTCGCCGCGTCCACCGACGCCGCCACCGGCGTCGCCTCCCACGACCGCGTCATCTCCTCCAACGTCTCCGCGCGCCTCTACCTCCCCCGCCTCGACGACTCCGCCGCCGCCAAGGCCAAGCTCCCCGTGCTCGTCTACTACCACGGCGGCGGGTTCTGCCTCGGCTCGGCCTTCAACCCCACGTTCCACGCCTACTTCAACACCTTCGCCGCGCTCGCCAACGCCCTCGTCGTCTCCGTCGAGTACCGCCTCGCGCCGGAGCACCCCGTCCCGGCGGCCTACGCGGACTCGTGGGAGGCGCTCGCGTGGGTCGCCGGACACGCCGCGGGGGATGGCGACGAGGCGTGGCTCGTCGACCACGCCGACTTCTCCCGCCTCTACCTCGGCGGCGAGAGCGCCGGCTCCAACATCGCGCACCACATAGCGATGCGGGTGGCCGAGGAGGGGCTCCCCCACGGCGCCAAGATCCGGGGCCTCGTCATGATCCACCCC-TACTTCCTCGGCACTAACAGGGTGGCC-TCCGACGACCTGG-ACCCCGCCGTGCGC-GAG-AGCC-TC-GGGAGCCTGT-GGCGCG-TCATGTGCCC-GGCCACCACGGGCGAGGACGACCCGCTCATCAACCCGC-TCG-TGGACGGCGCGCCGGCGCTCGACGCGCTGGCG-TGCGACCGCGTGCTCGTGTGCATCGGCGAGGGCGACGTGCTCCGCGACCGCGGCCGCGCCTACTACGACCGGCTCACGTCGAGCGGGTGGCGCGGCGAGGCGGAGATATGGCAGGCGCCGGAGAAGGGGCACACGTTCCACCTCCTCGAGCCGCACTGCGACGCGGCCATCGCGCAGGACAAGGTCATCAGTGGCTTCCTCAACCGTTGACTCGCCGTCGCCGGCGATGACACCGTCGTCGTCGGAATCGGAGATTACCAAGATTAGCATCGGTTCATACCCAGAATAACTGCAGCTACGTCGCCGACGGATGCCGCTGCCGCGCCATACTTACTACTCCACTACTACATTTTACATTTTGGATTCAGGATTGTGTTGCATCTTTTGCAATTGGGTGTATGGATGGAAGGAAATCGCCATTGATTTAGGTGAGGGTATTGTAGTATCAGGAAGTTGGGGGAGATAAATGATAATACTACAGTCATAGACTTCATACAGATGAAATTATTCTGCTTTGTTTGACACATTGATTCATTTTCTTTGGAACTCCAGTGAAAGCATTGTTCTTAACTCTTTGCATCAAAGAATTACTTGCTTATACTCTTCAAAAAAAAAAAAAAAAAAACAGAG] [+] EMBL AK060706 [CCCTCCTCTTGCGTTCTCGCCTCGGTCTCCAACTCTGCAACCACCGCCGTCTCTTCTCCAGATCTCCACCGCGCCATGGACGCCGCACCCACCGCGCCGCCGGCGGCGTCGGCCGACGACGAGATCGTGTACGAGTCGATGCCCTGCATCCGCATCTACAAGAACCGCGTGGAGCGCTACTTCGGCTCCGAGTTCGTCGCCGCGTCCACCGACGCCGCCACCGGCGTCGCCTCCCACGACCGCGTCATCTCCTCCAACGTCTCCGCGCGCCTCTACCTCCCCCGCCTCGACGACTCCGCCGCCGCCAAGGCCAAGCTCCCCGTGCTCGTCTACTACCACGGCGGCGGGTTCTGCCTCGGCTCGGCCTTCAACCCCACGTTCCACGCCTACTTCAACACCTTCGCCGCGCTCGCCAACGCCCTCGTCGTCTCCGTCGAGTACCGCCTCGCGCCGGAGCACCCCGTCCCGGCGGCCTACGCGGACTCGTGGGAGGCGCTCGCGTGGGTCGCCGGACACGCCGCGGGGGATGGCGACGAGGCGTGGCTCGTCGACCACGCCGACTTCTCCCGCCTCTACCTCGGCGGCGAGAGCGCCGGCTCCAACATCGCGCACCACATAGCGATGCGGGTGGCCGAGGAGGGGCTCCCCCACGGCGCCAAGATCCGGGGCCTCGTCATGATCCACCCC TACTTCCTCGGCACTAACAGGGTGGCC TCCGACGACCTGG ACCCCGCCGTGCGC GAG AGCC TC GGGAGCCTGT GGCGCG TCATGTGCCC GGCCACCACGGGCGAGGACGACCCGCTCATCAACCCGC TCG TGGACGGCGCGCCGGCGCTCGACGCGCTGGCG TGCGACCGCGTGCTCGTGTGCATCGGCGAGGGCGACGTGCTCCGCGACCGCGGCCGCGCCTACTACGACCGGCTCACGTCGAGCGGGTGGCGCGGCGAGGCGGAGATATGGCAGGCGCCGGAGAAGGGGCACACGTTCCACCTCCTCGAGCCGCACTGCGACGCGGCCATCGCGCAGGACAAGGTCATCAGTGGCTTCCTCAACCGTTGACTCGCCGTCGCCGGCGATGACACCGTCGTCGTCGGAATCGGAGATTACCAAGATTAGCATCGGTTCATACCCAGAATAACTGCAGCTACGTCGCCGACGGATGCCGCTGCCGCGCCATACTTACTACTCCACTACTACATTTTACATTTTGGATTCAGGATTGTGTTGCATCTTTTGCAATTGGGTGTATGGATGGAAGGAAATCGCCATTGATTTAGGTGAGGGTATTGTAGTATCAGGAAGTTGGGGGAGATAAATGATAATACTACAGTCATAGACTTCATACAGATGAAATTATTCTGCTTTGTTTGACACATTGATTCATTTTCTTTGGAACTCCAGTGAAAG ] [+] EMBL AK073975 [ CTCCTCTTGCGTTCTCGCCTCGGTCTCCAACTCTGCAACCACCGCCGTCTCTTCTCCAGATCTCCACCGCGCCATGGACGCCGCACCCACCGCGCCGCCGGCGGCGTCGGCCGACGACGAGATCGTGTACGAGTCGATGCCCTGCATCCGCATCTACAAGAACCGCGTGGAGCGCTACTTCGGCTCCGAGTTCGTCGCCGCGTCCACCGACGCCGCCACCGGCGTCGCCTCCCACGACCGCGTCATCTCCTCCAACGTCTCCGCGCGCCTCTACCTCCCCCGCCTCGACGACTCCGCTGCCGCCAAGGCCAAGCTCCCCGTGCTCGTCTACTACCACGGCGGCGGGTTCTGCCTCGGCTCGGCCTTCAACCCCACGTTCCACGCCTACTTCAACACCTTCGCCGCGCTCGCCAACGCCCTCGTCGTCTCCGTCGAGTACCGCCTCGCGCCGGAGCACCCCGTCCCGGCGGCCTACGCGGACTCGTGGGAGGCGCTCGCGTGGGTCGCCGGACACGCCGCGGGGGATGGCGACGAGGCGTGGCTCGTCGACCACGCCGACTTCTCCCGCCTCTACCTCGGCGGCGAGAGCGCCGGCTCCAACATCGCGCACCACATAGCGATGCGGGTGGCCGAGGAGGGGCTCCCCCACGGCGCCAAGATCCGGGGCCTCGTCATGATCCACCCC TACTTCCTCGGCACTAACAGGGTGGCC TCCGACGACCTGG ACCCCGCCGTGCGC GAG AGCC TC GGGAGCCTGT GGCGCG TCATGTGCCC GGCCACCACGGGCGAGGACGACCCGCTCATCAACCCGC TCG TGGACGGCGCGCCGGCGCTCGACGCGCTGGCG TGCGACCGCGTGCTCGTGTGCATCGGCGAGGGCGACGTGCTCCGCGACCGCGGCCGCGCCTACTACGACCGGCTCACGTCGAGCGGGTGGCGCGGCGAGGCGGAGATATGGCAGGCGCCGGAGAAGGGGCACACGTTCCACCTCCTCGAGCCGCACTGCGACGCGGCCATCGCGCAGGACAAGGTCATCAGTGGCTTCCTCAACCGTTGACTCGCCGTCGCCGGCGATGACACCGTCGTCGTCGGAATCGGAGATTACCAAGATTAGCATCGGTTCATACCCAGAATAACTGCAGCTACGTCGCCGACGGATGCCGCTGCCGCGCCATACTTACTACTCCACTACTACATTTTACATTTTGGATTCAGGATTGTGTTGCATCTTTTGCAATTGGGTGTATGGATGGAAGGAAATCGCCATTGATTTAGGTGAGGGTATTGTAGTATCAGGAAGTTGGGGGAGATAAATGATAATACTACAGTCATAGACTTCATACAGATGAAATTATTCT ] [+] EMBL AU071048 [ TCGCCGCGCTCGCCAACGCCCTCGTCGTCTCCGTCGAGTACCGCCTCGCGCCGGAGCACCCCGTCCCGGCGGCCTACGCGGACTCGTGGGAGGCGCTCGCGTGGGTCGCCGGACACGCCGCGGGGGATGGCGACGAGGCGTGGCTCGTCGACCACGCCGACTTCTCCCGCCTCTACCTCGGCGGCGAGAGCGCCGGCTCCAACATCGCGCACCACATAGCGATGCGGGTGGCCGAGGAGGGGCTCCCCCACGGCGCCAAGATCCGGGGCCTCGTCATGATCCACCCCTTACTTCCTCGGCACTAACAGGGTGGCCTTCCGACGACCTGGAACCCCGCCGTGCGCGGAGAAGCCTTCGGGGAGCCTGTGGGCGCGTTCATGTGCCCGGGCCAACAAGGGCGANGACGAACCGCTCATCAAACCGCTTCGTTGGACNGTGCGCCGGCGTTCGANGCG TGGCGTTGCGACCGCGTGCTCGTGTGCATCGGCGANGGCGAAGTG ] [+] EMBL AU163480 [ ACTTCTCCCGCCTCTACCTCGGCGGCGAGAGCGCCGGCTCCAACATCGCGCACCACATAGCGATGCGGGTGGCCGAGGAGGGGCTCCCCCACGGCGCCAAGATCCGGGGCCTCGTCATGATCCACCCC TACTTCCTCGGCACTAACAGGGTGGCC TCCGACGACCTGG ACCCCGCCGTGCGC GAG AGCC TC GGGAGCCTGT GGCGCG TCATGTGCCC GGCCACCACGGGCGAGGACGACCCGCTCATCAACCCGC TCG TGGACGGCGCGCCGNCGCTCGACGCGCTGGCG TGCGACCGCGTGCTCGTGTGCATCGGCGAGGGCGACGTGtcgc ] [+] EMBL BI305495 [ GGCCGCGCCTACTACGACCGGCTCACGTCGAGCGGGTGGCGCGGCGAGGCGGAGATATGGCAGGCGCCGGAGAAGGGGCACACGTTCCACCTCCTCGAGCCGCACTGCGACGCGGCCATCGCGCAGGACAAGGTCATCAGTGGCTTCCTCAACCGTTGACTCGCCGTCGCCGGCGATGACACCGTCGTCGTCGGAATCGGAGATTACCAAGATTAGCATCGGTTCATACCCAGAATAACTGCAGCTACGTCGCCGACGGATGCCGCTGCCGCGCCATACTTACTACTCCACTACTACATTTTACATTTTGGATTCAGGATTGTGTTGCATCTTTTGCAATTGGGTGTATGGATGGAAGGAAATCGCCATTGATTTAGGTGAGGGTATTGTTGTATCAGGAAGTTGGGGGAGATAAATGATAATACTACAGTCATAGACTTCATACAGATGAAATTATACTGCTTTGTTTGACACATTGATTCATTTTCTTTGGAACTCCAGTGAAAGCATTGTTCTTAACTCTTTGCATCAAAGAATTACTTGCTTATACTCTTCAAAAAAAAAAAAAAAAAAACAGAG] [+] EMBL BU673345 [ cttGGGCGCGCCTACTACGACCGGCTCACGTCGAGCGGGTGGCGCGGCGAGGCGGAGATATGGCAGGCGCCGGAGAAGGGGCACACGTTCCACCTCCTCGAGCCGCACTGCGACGCGGCCATCGCGCAGGACAAGGTCATCAGTGGCTTCCTCAACCGTTGACTCGCCGTCGCCGGCGATGACACCGTCGTCGTCGGAATCGGAGATTACCAAGATTAGCATCGGTTCATACCCAGAATAACTGCAGCTACGTCGCCGACGGATGCCGCTGCCGCGCCATACTTACTACTCCACTACTACATTTTACATTTTGGATTCAGGATTGTGTTGCATCTTTTGCAATTGGGTGTATGGATGGAAGGAAATCGCCATTGATTTAGGTGAGGGTATTGTTGTATCAGGAAGTTGGGGGAGATAAATGATAATACTACAGTCATAGACTTCATACAGATGAAATTATACTGCTTTGTTTGACACATTGATTCATTTTCTTTGGAACTCCAGTGAAAGCATTGTTCTTAACTCTTTGCATCAAAGAATTACTTGCTTATACTCTTCAAAAAAAAAAAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||