These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9504#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1456 fasta sequence [GACGACGGCGACCTCACCGCCGCCGGGGATGAAGCGCCGCCACCTCCCGCCCGTCCTCGTCCTCCTCCTCCTCTCAATCCTCTCCCTCTCCTTCCGCCGCCGCCTCCTCGTGCTGCAGGGCCCCCCGTCGTCGTCGTCGTCGTCCCGCCACCCCGTCGGTGACCCCCTCCTCCGCCGCCTCGCGGCCGACGATGGCGCCGGATCCAGCCAGATCCTCGCCGAGGCCGCCGCGCTGTTCGCCAACGCGTCGATCTCGACGTTCCCCAGCCTCGGCAACCACCACCGGCTGCTCTACCTCCGCATGCCGTACGCCTTCTCCCCGCGCGCCCCGCCGCGGCCCAAGACCGTCGCCCGCCTCCGCGTCCCGGTCGACGCGCTCCCCCCCGACGGGAAGCTCCTCGCCTCGTTCAGGGCATCGCTCGGGTCGTTCCTCGCCGGCCGCCGCCGCCGCGGCCGCGGGGGGAATGTGGCCGGCGTGATGCGCGACCTCGCGGGGGTCCTCGGCCGCCGGTACCGGACCTGCGCCGTGGTCGGGAACAGCGGCGTGCTCCTCGGCTCCGGCCGTGGCCCGCAGATCGACGCGCACGACCTCGTCATCCGCCTCAACAACGCGCGCGTCGCCGGGTTCGCCGCGGACGTCGGCGTCAAGACCTCCCTCTCCTTCGTCAACTCCAACATCCTCCACATCTGCGCCGCCCGCAACGCCATCACCCGCGCCGCCTGCGGCTGCCACCCGTACGGCGGCGAGGTGCCCATGGCGATGTACGTCTGCCAGCCCGCCC-ACCTCCTCGAC-GCGCTCATCTGC-AAC-GCCACCGCCACGCCGTCCTCCCCGTTCCCGCTCCTCGTCACCGAC-GCGCGCCTCGACGCGC-TGTGCGCGCGCATCGCCAAGTACTACTCGCTGAGGCGGTTCGTCTCCGCCACCGGCGAGCCGGCGGCGAACTGGACGCGGAGGCACGACGAGAGGTACTTCCACTACTCGTCGGGGATGCAGGCGGTGGTGATGGCGCTCGGCGTCTGCGACGAGGTGAGCCTCTTCGGCTTCGGCAAGTCGCCCGGCGCCAAGCACCATTACCACACCAACCAGAAGAAGGAGCTGGACCTGCACGACTACGAGGCGGAGTACGACTTCTACGGCGACCTCCAGGCGCGGCCGGCGGCGGTGCCC-TTCCTCGACGACGCCCACGGCTTCACCGTGCCGCCGGTGAGGTTGCACTGGTGACGGTGACCCCGACGTGGGTGTATGTGTAGCTGCTGCTGAATTTTGTTGTAAAATTGAAACTGATTTCATATTCGATACGTAGAATCCCATTGTAATTTGTAAATCAGGGGGAATGGGAGGAGATACGGACACAAGATGTGTGTCAGATTTGGGAGCTTTGTAAGGAGAAATGTAGCTCAATTTTGTTGTGAATTTATTCGAACCATTGCAGTGAACTTGTTGATCATGGAAGCGCTT] [+] EMBL AK058389 [GACGACGGCGACCTCACCGCCGCCGGGGATGAAGCGCCGCCACCTCCCGCCCGTCCTCGTCCTCCTCCTCCTCTCAATCCTCTCCCTCTCCTTCCGCCGCCGCCTCCTCGTGCTGCAGGGCCCCCCGTCGTCGTCGTCGTCGTCCCGCCACCCCGTCGGTGACCCCCTCCTCCGCCGCCTCGCGGCCGACGATGGCGCCGGATCCAGCCAGATCCTCGCCGAGGCCGCCGCGCTGTTCGCCAACGCGTCGATCTCGACGTTCCCCAGCCTCGGCAACCACCACCGGCTGCTCTACCTCCGCATGCCGTACGCCTTCTCCCCGCGCGCCCCGCCGCGGCCCAAGACCGTCGCCCGCCTCCGCGTCCCGGTCGACGCGCTCCCCCCCGACGGGAAGCTCCTCGCCTCGTTCAGGGCATCGCTCGGGTCGTTCCTCGCCGGCCGCCGCCGCCGCGGCCGCGGGGGGAATGTGGCCGGCGTGATGCGCGACCTCGCGGGGGTCCTCGGCCGCCGGTACCGGACCTGCGCCGTGGTCGGGAACAGCGGCGTGCTCCTCGGCTCCGGCCGTGGCCCGCAGATCGACGCGCACGACCTCGTCATCCGCCTCAACAACGCGCGCGTCGCCGGGTTCGCCGCGGACGTCGGCGTCAAGACCTCCCTCTCCTTCGTCAACTCCAACATCCTCCACATCTGCGCCGCCCGCAACGCCATCACCCGCGCCGCCTGCGGCTGCCACCCGTACGGCGGCGAGGTGCCCATGGCGATGTACGTCTGCCAGCCCGCCC ACCTCCTCGAC GCGCTCATCTGC AAC GCCACCGCCACGCCGTCCTCCCCGTTCCCGCTCCTCGTCACCGAC GCGCGCCTCGACGCGC TGTGCGCGCGCATCGCCAAGTACTACTCGCTGAGGCGGTTCGTCTCCGCCACCGGCGAGCCGGCGGCGAACTGGACGCGGAGGCACGACGAGAGGTACTTCCACTACTCGTCGGGGATGCAGGCGGTGGTGATGGCGCTCGGCGTCTGCGACGAGGTGAGCCTCTTCGGCTTCGGCAAGTCGCCCGGCGCCAAGCACCATTACCACACCAACCAGAAGAAGGAGCTGGACCTGCACGACTACGAGGCGGAGTACGACTTCTACGGCGACCTCCAGGCGCGGCCGGCGGCGGTGCCC TTCCTCGACGACGCCCACGGCTTCACCGTGCCGCCGGTGAGGTTGCACTGGTGACGGTGACCCCGACGTGGGTGTATGTGTAGCTGCTGCTGAATTTTGTTGTAAAATTGAAACTGATTTCATATTCGATACGTAGAATCCCATTGTAATTTGTAAATCAGGGGGAATGGGAGGAGATACGGACACAAGATGTGTGTCAGATTTGGGAGCTTTGTAAGGAGAAATGTAGCTCAATTTTGTTGTGAATTTATTCGAACCATTGCAGTGAACTTGTTGATCATGGAAGCGCTT] [+] EMBL AK105865 [GACGACGGCGACCTCACCGCCGCCGGGGATGAAGCGCCGCCACCTCCCGCCCGTCCTCGTCCTCCTCCTCCTCTCAATCCTCTCCCTCTCCTTCCGCCGCCGCCTCCTCGTGCTGCAGGGCCCCCCGTCGTCGTCGTCGTCGTCCCGCCACCCCGTCGGTGACCCCCTCCTCCGCCGCCTCGCGGCCGACGATGGCGCCGGATCCAGCCAGATCCTCGCCGAGGCCGCCGCGCTGTTCGCCAACGCGTCGATCTCGACGTTCCCCAGCCTCGGCAACCACCACCGGCTGCTCTACCTCCGCATGCCGTACGCCTTCTCCCCGCGCGCCCCGCCGCGGCCCAAGACCGTCGCCCGCCTCCGCGTCCCGGTCGACGCGCTCCCCCCCGACGGGAAGCTCCTCGCCTCGTTCAGGGCATCGCTCGGGTCGTTCCTCGCCGGCCGCCGCCGCCGCGGCCGCGGGGGGAATGTGGCCGGCGTGATGCGCGACCTCGCGGGGGTCCTCGGCCGCCGGTACCGGACCTGCGCCGTGGTCGGGAACAGCGGCGTGCTCCTCGGCTCCGGCCGTGGCCCGCAGATCGACGCGCACGACCTCGTCATCCGCCTCAACAACGCGCGCGTCGCCGGGTTCGCCGCGGACGTCGGCGTCAAGACCTCCCTCTCCTTCGTCAACTCCAACATCCTCCACATCTGCGCCGCCCGCAACGCCATCACCCGCGCCGCCTGCGGCTGCCACCCGTACGGCGGCGAGGTGCCCATGGCGATGTACGTCTGCCAGCCCGCCC ACCTCCTCGAC GCGCTCATCTGC AAC GCCACCGCCACGCCGTCCTCCCCGTTCCCGCTCCTCGTCACCGAC GCGCGCCTCGACGCGC TGTGCGCGCGCATCGCCAAGTACTACTCGCTGAGGCGGTTCGTCTCCGCCACCGGCGAGCCGGCGGCGAACTGGACGCGGAGGCACGACGAGAGGTACTTCCACTACTCGTCGGGGATGCAGGCGGTGGTGATGGCGCTCGGCGTCTGCGACGAGGTGAGCCTCTTCGGCTTCGGCAAGTCGCCCGGCGCCAAGCACCATTACCACACCAACCAGAAGAAGGAGCTGGACCTGCACGACTACGAGGCGGAGTACGACTTCTACGGCGACCTCCAGGCGCGGCCGGCGGCGGTGCCC TTCCTCGACGACGCCCACGGCTTCACCGTGCCGCCGGTGAGGTTGCACTGGTGACGGTGACCCCGACGTGGGTGTATGTGTAGCTGCTGCTGAATTTTGTTGTAAAATTGAAACTGATTTCATATTCGATACGTAGAATCCCATTGTAATTTGTAAATCAGGGGGAATGGGAGGAGATACGGACACAAGATGTGTGTCAGATTTGGGAGCTTTGTAAGGAGAAATGTAGCTCAATTTTGTTGTGAATTTATTCGAACCATTGCAGTGAACTTGTTGATCATGGAAGCGCTT] [+] EMBL AU078330 [ GCCAGCCCGCCC ACCTCCTCGAC GCGCTCATCTGC AAC GCCACCGCCACGCCGTCCTCCCCGTTCCCGCTCCTCGTCACCGAC GCGCGCCTCGACGCGC TGTGCGCGCGCATCGCCAAGTACTACTCGCTGAGGCGGTTCGTCTCCGCCACCGGCGAGCCGGCGGCGAACTGGACGCGGAGGCACGACGAGAGGTACTTCCACTACTCGTCGGGGATGCAGGCGGTGGTGATGGCGCTCGGCGTCTGCGACGAGGTGAGCCTCTTCGGCTTCGGCAAGTCG CCGGCGCCAAGCACCATTACCACACCAACCAGAAGAAGGAGCTGGACCTGCACGACTACGAGGCGGAGTACGACTTCTACGGCGACCTCCAGGCGCGGCCGGCGGCGGTGCCC TTCCTCGACGACGCCCACGGCTT ACCGTGCCGCCGGTGAGGTTG ACTGGTGACGGTGACCCCGACGTGGGTGTATGTGTAGCTGCTGCTGAATTTTGGTGTAAAATTGAAACTGATTTCATATTC ] [+] EMBL OSC2011 [ GCCAGCCCGCCC ACCTCCTCGAC GCGCTCATCTGC AAC G CACCGCCACGCCGTCCTCCCCGTTCCCGCTCCTCGTCACCGAC GCGCGCCTCGACGTG NTGCG GCAGTNCGCCAAGTACTACTCGCTGAGGC GTTCGTCTCCGCCACCGGAGA CC GCGGANANCTGGACGCGGAGG ACGACGAGAGGTACTTCCACTACTCGTCGGGGATGCAGGCGGTGGTGATGGCGCTCGG GTCTGCGACGAGGTGAGCCTCTTCGGCTTCGGCAAGTCGCCCGGCGCCAAG ACCATTACCACACCAACCAGAAGAAGGAGCTGGACCTGCACGACTACGAGGCGGAGTACGACTTCTACGGCGACCTTCAAGCGGNGCCGGCGG GGTGCCCTTTCCTCGACGACG CCACGGTTTTACCGTGCCGCCGGT ] [+] EMBL AU078331 [ CCAGCCCGCCCAACTTCCTCGACGGGGTTCATNTGCAAACGGCCACCGCCACGCCGTCCTCCCCGTTCCCGCTCCTCGTCACCGACGGCGCGCCTCGACGCGC TGTGCGCGCGCATCGCCAAGTACTACTCGCTGAGGCGGTTCGTCTCCGCCACCGGCGAGCCGGCGGCGAACTGGACGCGGAGGCACGACGAGAGGTACTTCCACTACTCGTCGGGGATGCAGGCGGTGGTGATGGCGCTCGGCGTCTGCGACGAGGTGAGCCTCTTCGGCTTCGGCAAGTCGCCCGGCGCCAAGCACCATTACCACACCAACCAGAAGAAGGAGCTGGACCTGCACGACTACGAGGCGGAGTACGACTTCTACGGCGACCTCCAGGCGCGGCCGGCGGCGGTGCCC TTCCTCGACGACGCCCACGGCTTCACCGTGCCGCCGGTGAGGTTGCACTGGTGACGGTGACCCCGACGTGGGTGTATGTGTAGCTGCTGCTGAATTTTGTTGTAAAATTGAAACTGATTTCATATTCGATACGTAGAATCCCATTGTAATTTGTAAATCAGGGGGAATGGGAGGAGATACGGACACAAGATGTGTGTCAGATTTGGGAGCTTTGTAAGGAGAAATGTAGCTCAATTTTGTTGTGAATTTATTCGAACCATTGCAGTGAAaaa ] [+] EMBL AU163987 [ g GCGCGCCTCAACGCGCTTGTGCGCGCGCATCGCCAAGTACTACTCGCTAAGGCGGTTCGTCTCCGCCACCGGCGAGCCGGCGGCGAACTGGACGCGGAGGCACGACGAGAGGTACTTCCACTACTCGTCGGGGATGCAGNCGGTGGTGATGGCGCTCGGCGTCTGCGACGAGGTGAGCCTCTTCGGCTTCGGCAAGTCGCCCGGCGCCAAGCACCATTACCACACCAACCAGAAGAAGGAGCTGGACCTGCACGACTACGAGGCGGAGTACGACTTCTACGGCGACCTCCAGGCGCGGCCGGCGGCGGTGCCC TTCCTCGACGACGCCCACGGCTTCACCGTGCCGCCGGTGAGGTTGCACTGGTGACGGTGACCCCGACGTGGGTGTATGTGTAGCTGCTGCTGAATTTTGTTGTAAAATTGAAACTGATTTCATATTCGATACGTAGAATCCCATTGTAATTTGTAAATCAGGGGGAATGGGAGGAGATACGGACACAAGATGTGTGTCAGATTTGGGAGCTTTGTAAGGAGAAATGTAGCTCAATTTTGTTGTGAATTTATTCGAACCATTGCAGTGAAaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||