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Oryza sativa
cluster # 9504 cluster # 9504       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9504#0 length = 1456 sequences # 6  

consensusID : consensus_9504#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1456
fasta sequence
                              [GACGACGGCGACCTCACCGCCGCCGGGGATGAAGCGCCGCCACCTCCCGCCCGTCCTCGTCCTCCTCCTCCTCTCAATCCTCTCCCTCTCCTTCCGCCGCCGCCTCCTCGTGCTGCAGGGCCCCCCGTCGTCGTCGTCGTCGTCCCGCCACCCCGTCGGTGACCCCCTCCTCCGCCGCCTCGCGGCCGACGATGGCGCCGGATCCAGCCAGATCCTCGCCGAGGCCGCCGCGCTGTTCGCCAACGCGTCGATCTCGACGTTCCCCAGCCTCGGCAACCACCACCGGCTGCTCTACCTCCGCATGCCGTACGCCTTCTCCCCGCGCGCCCCGCCGCGGCCCAAGACCGTCGCCCGCCTCCGCGTCCCGGTCGACGCGCTCCCCCCCGACGGGAAGCTCCTCGCCTCGTTCAGGGCATCGCTCGGGTCGTTCCTCGCCGGCCGCCGCCGCCGCGGCCGCGGGGGGAATGTGGCCGGCGTGATGCGCGACCTCGCGGGGGTCCTCGGCCGCCGGTACCGGACCTGCGCCGTGGTCGGGAACAGCGGCGTGCTCCTCGGCTCCGGCCGTGGCCCGCAGATCGACGCGCACGACCTCGTCATCCGCCTCAACAACGCGCGCGTCGCCGGGTTCGCCGCGGACGTCGGCGTCAAGACCTCCCTCTCCTTCGTCAACTCCAACATCCTCCACATCTGCGCCGCCCGCAACGCCATCACCCGCGCCGCCTGCGGCTGCCACCCGTACGGCGGCGAGGTGCCCATGGCGATGTACGTCTGCCAGCCCGCCC-ACCTCCTCGAC-GCGCTCATCTGC-AAC-GCCACCGCCACGCCGTCCTCCCCGTTCCCGCTCCTCGTCACCGAC-GCGCGCCTCGACGCGC-TGTGCGCGCGCATCGCCAAGTACTACTCGCTGAGGCGGTTCGTCTCCGCCACCGGCGAGCCGGCGGCGAACTGGACGCGGAGGCACGACGAGAGGTACTTCCACTACTCGTCGGGGATGCAGGCGGTGGTGATGGCGCTCGGCGTCTGCGACGAGGTGAGCCTCTTCGGCTTCGGCAAGTCGCCCGGCGCCAAGCACCATTACCACACCAACCAGAAGAAGGAGCTGGACCTGCACGACTACGAGGCGGAGTACGACTTCTACGGCGACCTCCAGGCGCGGCCGGCGGCGGTGCCC-TTCCTCGACGACGCCCACGGCTTCACCGTGCCGCCGGTGAGGTTGCACTGGTGACGGTGACCCCGACGTGGGTGTATGTGTAGCTGCTGCTGAATTTTGTTGTAAAATTGAAACTGATTTCATATTCGATACGTAGAATCCCATTGTAATTTGTAAATCAGGGGGAATGGGAGGAGATACGGACACAAGATGTGTGTCAGATTTGGGAGCTTTGTAAGGAGAAATGTAGCTCAATTTTGTTGTGAATTTATTCGAACCATTGCAGTGAACTTGTTGATCATGGAAGCGCTT]

[+] EMBL AK058389             [GACGACGGCGACCTCACCGCCGCCGGGGATGAAGCGCCGCCACCTCCCGCCCGTCCTCGTCCTCCTCCTCCTCTCAATCCTCTCCCTCTCCTTCCGCCGCCGCCTCCTCGTGCTGCAGGGCCCCCCGTCGTCGTCGTCGTCGTCCCGCCACCCCGTCGGTGACCCCCTCCTCCGCCGCCTCGCGGCCGACGATGGCGCCGGATCCAGCCAGATCCTCGCCGAGGCCGCCGCGCTGTTCGCCAACGCGTCGATCTCGACGTTCCCCAGCCTCGGCAACCACCACCGGCTGCTCTACCTCCGCATGCCGTACGCCTTCTCCCCGCGCGCCCCGCCGCGGCCCAAGACCGTCGCCCGCCTCCGCGTCCCGGTCGACGCGCTCCCCCCCGACGGGAAGCTCCTCGCCTCGTTCAGGGCATCGCTCGGGTCGTTCCTCGCCGGCCGCCGCCGCCGCGGCCGCGGGGGGAATGTGGCCGGCGTGATGCGCGACCTCGCGGGGGTCCTCGGCCGCCGGTACCGGACCTGCGCCGTGGTCGGGAACAGCGGCGTGCTCCTCGGCTCCGGCCGTGGCCCGCAGATCGACGCGCACGACCTCGTCATCCGCCTCAACAACGCGCGCGTCGCCGGGTTCGCCGCGGACGTCGGCGTCAAGACCTCCCTCTCCTTCGTCAACTCCAACATCCTCCACATCTGCGCCGCCCGCAACGCCATCACCCGCGCCGCCTGCGGCTGCCACCCGTACGGCGGCGAGGTGCCCATGGCGATGTACGTCTGCCAGCCCGCCC ACCTCCTCGAC GCGCTCATCTGC AAC GCCACCGCCACGCCGTCCTCCCCGTTCCCGCTCCTCGTCACCGAC GCGCGCCTCGACGCGC TGTGCGCGCGCATCGCCAAGTACTACTCGCTGAGGCGGTTCGTCTCCGCCACCGGCGAGCCGGCGGCGAACTGGACGCGGAGGCACGACGAGAGGTACTTCCACTACTCGTCGGGGATGCAGGCGGTGGTGATGGCGCTCGGCGTCTGCGACGAGGTGAGCCTCTTCGGCTTCGGCAAGTCGCCCGGCGCCAAGCACCATTACCACACCAACCAGAAGAAGGAGCTGGACCTGCACGACTACGAGGCGGAGTACGACTTCTACGGCGACCTCCAGGCGCGGCCGGCGGCGGTGCCC TTCCTCGACGACGCCCACGGCTTCACCGTGCCGCCGGTGAGGTTGCACTGGTGACGGTGACCCCGACGTGGGTGTATGTGTAGCTGCTGCTGAATTTTGTTGTAAAATTGAAACTGATTTCATATTCGATACGTAGAATCCCATTGTAATTTGTAAATCAGGGGGAATGGGAGGAGATACGGACACAAGATGTGTGTCAGATTTGGGAGCTTTGTAAGGAGAAATGTAGCTCAATTTTGTTGTGAATTTATTCGAACCATTGCAGTGAACTTGTTGATCATGGAAGCGCTT]
[+] EMBL AK105865             [GACGACGGCGACCTCACCGCCGCCGGGGATGAAGCGCCGCCACCTCCCGCCCGTCCTCGTCCTCCTCCTCCTCTCAATCCTCTCCCTCTCCTTCCGCCGCCGCCTCCTCGTGCTGCAGGGCCCCCCGTCGTCGTCGTCGTCGTCCCGCCACCCCGTCGGTGACCCCCTCCTCCGCCGCCTCGCGGCCGACGATGGCGCCGGATCCAGCCAGATCCTCGCCGAGGCCGCCGCGCTGTTCGCCAACGCGTCGATCTCGACGTTCCCCAGCCTCGGCAACCACCACCGGCTGCTCTACCTCCGCATGCCGTACGCCTTCTCCCCGCGCGCCCCGCCGCGGCCCAAGACCGTCGCCCGCCTCCGCGTCCCGGTCGACGCGCTCCCCCCCGACGGGAAGCTCCTCGCCTCGTTCAGGGCATCGCTCGGGTCGTTCCTCGCCGGCCGCCGCCGCCGCGGCCGCGGGGGGAATGTGGCCGGCGTGATGCGCGACCTCGCGGGGGTCCTCGGCCGCCGGTACCGGACCTGCGCCGTGGTCGGGAACAGCGGCGTGCTCCTCGGCTCCGGCCGTGGCCCGCAGATCGACGCGCACGACCTCGTCATCCGCCTCAACAACGCGCGCGTCGCCGGGTTCGCCGCGGACGTCGGCGTCAAGACCTCCCTCTCCTTCGTCAACTCCAACATCCTCCACATCTGCGCCGCCCGCAACGCCATCACCCGCGCCGCCTGCGGCTGCCACCCGTACGGCGGCGAGGTGCCCATGGCGATGTACGTCTGCCAGCCCGCCC ACCTCCTCGAC GCGCTCATCTGC AAC GCCACCGCCACGCCGTCCTCCCCGTTCCCGCTCCTCGTCACCGAC GCGCGCCTCGACGCGC TGTGCGCGCGCATCGCCAAGTACTACTCGCTGAGGCGGTTCGTCTCCGCCACCGGCGAGCCGGCGGCGAACTGGACGCGGAGGCACGACGAGAGGTACTTCCACTACTCGTCGGGGATGCAGGCGGTGGTGATGGCGCTCGGCGTCTGCGACGAGGTGAGCCTCTTCGGCTTCGGCAAGTCGCCCGGCGCCAAGCACCATTACCACACCAACCAGAAGAAGGAGCTGGACCTGCACGACTACGAGGCGGAGTACGACTTCTACGGCGACCTCCAGGCGCGGCCGGCGGCGGTGCCC TTCCTCGACGACGCCCACGGCTTCACCGTGCCGCCGGTGAGGTTGCACTGGTGACGGTGACCCCGACGTGGGTGTATGTGTAGCTGCTGCTGAATTTTGTTGTAAAATTGAAACTGATTTCATATTCGATACGTAGAATCCCATTGTAATTTGTAAATCAGGGGGAATGGGAGGAGATACGGACACAAGATGTGTGTCAGATTTGGGAGCTTTGTAAGGAGAAATGTAGCTCAATTTTGTTGTGAATTTATTCGAACCATTGCAGTGAACTTGTTGATCATGGAAGCGCTT]
[+] EMBL AU078330             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCCAGCCCGCCC ACCTCCTCGAC GCGCTCATCTGC AAC GCCACCGCCACGCCGTCCTCCCCGTTCCCGCTCCTCGTCACCGAC GCGCGCCTCGACGCGC TGTGCGCGCGCATCGCCAAGTACTACTCGCTGAGGCGGTTCGTCTCCGCCACCGGCGAGCCGGCGGCGAACTGGACGCGGAGGCACGACGAGAGGTACTTCCACTACTCGTCGGGGATGCAGGCGGTGGTGATGGCGCTCGGCGTCTGCGACGAGGTGAGCCTCTTCGGCTTCGGCAAGTCG CCGGCGCCAAGCACCATTACCACACCAACCAGAAGAAGGAGCTGGACCTGCACGACTACGAGGCGGAGTACGACTTCTACGGCGACCTCCAGGCGCGGCCGGCGGCGGTGCCC TTCCTCGACGACGCCCACGGCTT ACCGTGCCGCCGGTGAGGTTG ACTGGTGACGGTGACCCCGACGTGGGTGTATGTGTAGCTGCTGCTGAATTTTGGTGTAAAATTGAAACTGATTTCATATTC                                                                                                                                                                    ]
[+] EMBL OSC2011              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCCAGCCCGCCC ACCTCCTCGAC GCGCTCATCTGC AAC G CACCGCCACGCCGTCCTCCCCGTTCCCGCTCCTCGTCACCGAC GCGCGCCTCGACGTG   NTGCG GCAGTNCGCCAAGTACTACTCGCTGAGGC GTTCGTCTCCGCCACCGGAGA CC GCGGANANCTGGACGCGGAGG ACGACGAGAGGTACTTCCACTACTCGTCGGGGATGCAGGCGGTGGTGATGGCGCTCGG GTCTGCGACGAGGTGAGCCTCTTCGGCTTCGGCAAGTCGCCCGGCGCCAAG ACCATTACCACACCAACCAGAAGAAGGAGCTGGACCTGCACGACTACGAGGCGGAGTACGACTTCTACGGCGACCTTCAAGCGGNGCCGGCGG GGTGCCCTTTCCTCGACGACG CCACGGTTTTACCGTGCCGCCGGT                                                                                                                                                                                                                                                             ]
[+] EMBL AU078331             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCAGCCCGCCCAACTTCCTCGACGGGGTTCATNTGCAAACGGCCACCGCCACGCCGTCCTCCCCGTTCCCGCTCCTCGTCACCGACGGCGCGCCTCGACGCGC TGTGCGCGCGCATCGCCAAGTACTACTCGCTGAGGCGGTTCGTCTCCGCCACCGGCGAGCCGGCGGCGAACTGGACGCGGAGGCACGACGAGAGGTACTTCCACTACTCGTCGGGGATGCAGGCGGTGGTGATGGCGCTCGGCGTCTGCGACGAGGTGAGCCTCTTCGGCTTCGGCAAGTCGCCCGGCGCCAAGCACCATTACCACACCAACCAGAAGAAGGAGCTGGACCTGCACGACTACGAGGCGGAGTACGACTTCTACGGCGACCTCCAGGCGCGGCCGGCGGCGGTGCCC TTCCTCGACGACGCCCACGGCTTCACCGTGCCGCCGGTGAGGTTGCACTGGTGACGGTGACCCCGACGTGGGTGTATGTGTAGCTGCTGCTGAATTTTGTTGTAAAATTGAAACTGATTTCATATTCGATACGTAGAATCCCATTGTAATTTGTAAATCAGGGGGAATGGGAGGAGATACGGACACAAGATGTGTGTCAGATTTGGGAGCTTTGTAAGGAGAAATGTAGCTCAATTTTGTTGTGAATTTATTCGAACCATTGCAGTGAAaaa                   ]
[+] EMBL AU163987             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        g GCGCGCCTCAACGCGCTTGTGCGCGCGCATCGCCAAGTACTACTCGCTAAGGCGGTTCGTCTCCGCCACCGGCGAGCCGGCGGCGAACTGGACGCGGAGGCACGACGAGAGGTACTTCCACTACTCGTCGGGGATGCAGNCGGTGGTGATGGCGCTCGGCGTCTGCGACGAGGTGAGCCTCTTCGGCTTCGGCAAGTCGCCCGGCGCCAAGCACCATTACCACACCAACCAGAAGAAGGAGCTGGACCTGCACGACTACGAGGCGGAGTACGACTTCTACGGCGACCTCCAGGCGCGGCCGGCGGCGGTGCCC TTCCTCGACGACGCCCACGGCTTCACCGTGCCGCCGGTGAGGTTGCACTGGTGACGGTGACCCCGACGTGGGTGTATGTGTAGCTGCTGCTGAATTTTGTTGTAAAATTGAAACTGATTTCATATTCGATACGTAGAATCCCATTGTAATTTGTAAATCAGGGGGAATGGGAGGAGATACGGACACAAGATGTGTGTCAGATTTGGGAGCTTTGTAAGGAGAAATGTAGCTCAATTTTGTTGTGAATTTATTCGAACCATTGCAGTGAAaaa                   ]


>consensus_9504#0 GACGACGGCGACCTCACCGCCGCCGGGGATGAAGCGCCGCCACCTCCCGCCCGTCCTCGT CCTCCTCCTCCTCTCAATCCTCTCCCTCTCCTTCCGCCGCCGCCTCCTCGTGCTGCAGGG CCCCCCGTCGTCGTCGTCGTCGTCCCGCCACCCCGTCGGTGACCCCCTCCTCCGCCGCCT CGCGGCCGACGATGGCGCCGGATCCAGCCAGATCCTCGCCGAGGCCGCCGCGCTGTTCGC CAACGCGTCGATCTCGACGTTCCCCAGCCTCGGCAACCACCACCGGCTGCTCTACCTCCG CATGCCGTACGCCTTCTCCCCGCGCGCCCCGCCGCGGCCCAAGACCGTCGCCCGCCTCCG CGTCCCGGTCGACGCGCTCCCCCCCGACGGGAAGCTCCTCGCCTCGTTCAGGGCATCGCT CGGGTCGTTCCTCGCCGGCCGCCGCCGCCGCGGCCGCGGGGGGAATGTGGCCGGCGTGAT GCGCGACCTCGCGGGGGTCCTCGGCCGCCGGTACCGGACCTGCGCCGTGGTCGGGAACAG CGGCGTGCTCCTCGGCTCCGGCCGTGGCCCGCAGATCGACGCGCACGACCTCGTCATCCG CCTCAACAACGCGCGCGTCGCCGGGTTCGCCGCGGACGTCGGCGTCAAGACCTCCCTCTC CTTCGTCAACTCCAACATCCTCCACATCTGCGCCGCCCGCAACGCCATCACCCGCGCCGC CTGCGGCTGCCACCCGTACGGCGGCGAGGTGCCCATGGCGATGTACGTCTGCCAGCCCGC CCACCTCCTCGACGCGCTCATCTGCAACGCCACCGCCACGCCGTCCTCCCCGTTCCCGCT CCTCGTCACCGACGCGCGCCTCGACGCGCTGTGCGCGCGCATCGCCAAGTACTACTCGCT GAGGCGGTTCGTCTCCGCCACCGGCGAGCCGGCGGCGAACTGGACGCGGAGGCACGACGA GAGGTACTTCCACTACTCGTCGGGGATGCAGGCGGTGGTGATGGCGCTCGGCGTCTGCGA CGAGGTGAGCCTCTTCGGCTTCGGCAAGTCGCCCGGCGCCAAGCACCATTACCACACCAA CCAGAAGAAGGAGCTGGACCTGCACGACTACGAGGCGGAGTACGACTTCTACGGCGACCT CCAGGCGCGGCCGGCGGCGGTGCCCTTCCTCGACGACGCCCACGGCTTCACCGTGCCGCC GGTGAGGTTGCACTGGTGACGGTGACCCCGACGTGGGTGTATGTGTAGCTGCTGCTGAAT TTTGTTGTAAAATTGAAACTGATTTCATATTCGATACGTAGAATCCCATTGTAATTTGTA AATCAGGGGGAATGGGAGGAGATACGGACACAAGATGTGTGTCAGATTTGGGAGCTTTGT AAGGAGAAATGTAGCTCAATTTTGTTGTGAATTTATTCGAACCATTGCAGTGAACTTGTT GATCATGGAAGCGCTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)