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Oryza sativa
cluster # 9535 cluster # 9535       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9535#0 length = 1244 sequences # 3  
consensus_9535#1 length = 808 sequences # 1  
consensus_9535#2 length = 727 sequences # 2  

consensusID : consensus_9535#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1244
fasta sequence
                              [TCTCACCTTCCATCAGCAATAGACCGGGCGGCGGCGACGGTACCAAGCTTTGCGGCGCGAGGGAGAGGAGCTTGCCAGACAGCCGCACATGGAAGGAGGAGCTCGTCGGCCGGTCGTGCCCGTGGAGAGGACCTGGCCGGCAGGGGTGCACATGAGGAGGAGATCGCAACCGTACGTTCGCACACATGAAGGAGCTCCCAGCGAGTCGTGCGTGGGGAGAAGAGTCGTCGGCTGGCCATGCGCAGGGAAGGAGCTTGCCATCCAGCACCGCGCGGGGAGAGAAGCTCCCGGCCGGCCGTGCATATGGAGAGGAGTCGTTGACCGGTTGCGCGCGGCGGAGTTGCTCGCCCGCCGGCCACACGGGGGTGGGGAGGGGGGGGAGCTCGCCGACCGGCCGTGTGCTGAGGAGGAGGTCCCGGCCGGCCACGCGCGGGAGAGGAGCTCGCTGGCCAGCCGTGCACGGGGAGATAGTTGTTGGCCAACCATGCGTGGGGGGAGCAGCTCGATTGCCGGTCACGCCCGGGGAGAGGTGTCGTCGGCCGGCCACGCGGCGGGGAAGGAGCTCGCCAACTGGCGCCGCGCAGGGAGATGATTTCCCAGCTAGCCGCGCACGCGAAGAGGAGTCGTCGGCCGGCCACCGTGATCCCCCTCGGCCGTGGTACCGTTTGCAGCGCCCAAGCACGTGGCTGTCCACCCCAGACCTACCAGAGAAAGAGATAAGGAAGAAGAGAAGGTTAAGATGGTTGACAGGTAGGGCCTACTGTTTTTTATTTCTACCATTATCACTTACATGTGGGACCGTTTTCTATTTTCAACTCCTTTAATGACTAGGTGCCACGTCAGCACACTTAGATCAAATCAACTTGCCACATCAGCAAAAGCCGGTTCAAAAACCACTAAAGGAGTTAATTTGTACCAGTTTTTAAAGTTGGGGGACATGTTATACCCGGTTTTGAGGTTGAGGGATGTGATTCAACCAAGAGCAAGAGTTGAGGGAGGAAAAATAGACTTATTTCAAGATTTTTACAAAATTTATTAAGGAATAAGTTCATTGGAGGTCCCTCAACAAAATTTAATTTTTTTTACAAATTTTACAAATTAGGATTTTTTGAGTTTACTTAACCATAAAACGAGAAATGTATACCTCTAAACTCATACAAACCGTACAATCAAGGTCCTATAGCAGTATATATAGGTGGCTTGACTGACGTGGCATTCTAGTCGAGAAAAAAAAGTCCACATGT]

[+] EMBL CB639161             [TCTCACCTTCCATCAGCAATAGACCGGGCGGCGGCGACGGTACCAAGCTTTGCGGCGCGAGGGAGAGGAGCTTGCCAGACAGCCGCACATGGAAGGAGGAGCTCGTCGGCCGGTCGTGCCCGTGGAGAGGACCTGGCCGGCAGGGGTGCACATGAGGAGGAGATCGCAACCGTACGTTCGCACACATGAAGGAGCTCCCAGCGAGTCGTGCGTGGGGAGAAGAGTCGTCGGCTGGCCATGCGCAGGGAAGGAGCTTGCCATCCAGCACCGCGCGGGGAGAGAAGCTCCCGGCCGGCCGTGCATATGGAGAGGAGTCGTTGACCGGTTGCGCGCGGCGGAGTTGCTCGCCCGCCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK059976             [                                                                                                                                                                             ACGTTCGCACACATGAAGGAGCTCCCAGCGAGTCGTGCGTGGGGAGAAGAGTCGTCGGCTGGCCATGCGCAGGGAAGGAGCTTGCCATCCAGCACCGCGCGGGGAGAGAAGCTCCCGGCCGGCCGTGCATATGGAGAGGAGTCGTTGACCGGTTGCGCGCGGCGGAGTTGCTCGCCCGCCGGTCACACGGGGGTGGGGAGGGGGGGGAGCTCGCCGACCGGCCGTGTGCTGAGGAGGAGGTCCCGGCCGGCCACGCGCGGGAGAGGAGCTCGCTGGCCAGCCGTGCACGGGGAGATAGTTGTTGGCCAACCATGCGTGGGGGGAGCAGCTCGATTGCCGGTCACGCCCGGGGAGAGGTGTCGTCGGCCGGCCACGCGGCGGGGAAGGAGCTCGCCAACTGGCGCCGCGCAGGGAGATGATTTCCCAGCTAGCCGCGCACGCGAAGAGGAGTCGTCGGCCGGCCACCGTGATCCCCCTCGGCCGTGGTACCGTTTGCAGCGCCCAAGCACGTGGCTGTCCACCCCAGACCTACCAGAGAAAGAGATAAGGAAGAAGAGAAGGTTAAGATGGTTGACAGGTAGGGCCTACTGTTTTTTATTTCTACCATTATCACTTACATGTGGGACCGTTTTCTATTTTCAACTCCTTTAATGACTAGGTGCCACGTCAGCACACTTAGATCAAATCAACTTGCCACATCAGCAAAAGCCGGTTCAAAAACCACTAAAGGAGTTAATTTGTACCAGTTTTTAAAGTTGGGGGACATGTTATACCCGGTTTTGAGGTTGAGGGATGTGATTCAACCAAGAGCAAGAGTTGAGGGAGGAAAAATAGACTTATTTCAAGATTTTTACAAAATTTATTAAGGAATAAGTTCATTGGAGGTCCCTCAACAAAATTTAATTTTTTTTACAAATTTTACAAATTAGGATTTTTTGAGTTTACTTAACCATAAAACGAGAAATGTATACCTCTAAACTCATACAAACCGTACAATCAAGGTCCTATAGCAGTATATATAGGTGGCTTGACTGACGTGGCATTCTAGTCGAGAAAAAAAAGTCCACATGT]
[+] EMBL CB672537             [                                                                                                                                                                                                                                                                                                                                                                                                                     GGAGGCGGTCCCGGCCGGCCACGCGCGGGAGAGGAGCTCGCTGGCCAGCCGTGCACGGGGAGATAGTTGTTGGCCAACCATGCGTGGGGGGAGCAGCTCGATTGCCGGTCACGCCCGGGGAGAGGTGTCGTCGGCCGGCCACGCGGCGGGGAAGGAGCTCGCCAACTGGCGCCGCGCAGGGAGATGATTTCCCAGCTAGCCGCGCACGCGAAGAGGAGTCGTCGGCCGGCCACCGTGATCCCCCTCGGCCGTGGTACCGTTTGCAGCGCCCAAGCACGTGGCTGTCCACCCCAGACCTACCAGAGAAAGAGATAAGGAAGAAGAGAAGGTTAAGATGGTTGACAGGTAGGGCCTACTGTTTTTTATTTCTACCATTATCACTTACATGTGGGACCGTTTTCTATTTTCAACTCCTTTAATGACTAGGTGCCACGTCAGCACACTTAGATCAAATCAACTTGCCACATCAGCAAAAGCCGGTTCAAAAACCACTAAAGGAGTTAATTTGTACCAGTTTTTAAAGTTGGGGGACATGTTATACCCGGTTTTGAGGTTGAGGGATGTGATTCAACCAAGAGCAAGAGTTGAGGGAGGAAAAATAGACTTATTTCAAGATTTTTACAAAATTTATTAAGGAATAAGTTCATTGGAGGTCCCTCAACAAAATTTAATTTTTTTTACAAATTTTACAAATTAGGATTTTTTGAGTTTACTTAACCATAAAACGAGAAATGTATACCTCTAAACTCATACAAACCGTACAATCAAAGTCCTATAGCAGTATATATAGGTGGCTTGACTG                                     ]


>consensus_9535#0 TCTCACCTTCCATCAGCAATAGACCGGGCGGCGGCGACGGTACCAAGCTTTGCGGCGCGA GGGAGAGGAGCTTGCCAGACAGCCGCACATGGAAGGAGGAGCTCGTCGGCCGGTCGTGCC CGTGGAGAGGACCTGGCCGGCAGGGGTGCACATGAGGAGGAGATCGCAACCGTACGTTCG CACACATGAAGGAGCTCCCAGCGAGTCGTGCGTGGGGAGAAGAGTCGTCGGCTGGCCATG CGCAGGGAAGGAGCTTGCCATCCAGCACCGCGCGGGGAGAGAAGCTCCCGGCCGGCCGTG CATATGGAGAGGAGTCGTTGACCGGTTGCGCGCGGCGGAGTTGCTCGCCCGCCGGCCACA CGGGGGTGGGGAGGGGGGGGAGCTCGCCGACCGGCCGTGTGCTGAGGAGGAGGTCCCGGC CGGCCACGCGCGGGAGAGGAGCTCGCTGGCCAGCCGTGCACGGGGAGATAGTTGTTGGCC AACCATGCGTGGGGGGAGCAGCTCGATTGCCGGTCACGCCCGGGGAGAGGTGTCGTCGGC CGGCCACGCGGCGGGGAAGGAGCTCGCCAACTGGCGCCGCGCAGGGAGATGATTTCCCAG CTAGCCGCGCACGCGAAGAGGAGTCGTCGGCCGGCCACCGTGATCCCCCTCGGCCGTGGT ACCGTTTGCAGCGCCCAAGCACGTGGCTGTCCACCCCAGACCTACCAGAGAAAGAGATAA GGAAGAAGAGAAGGTTAAGATGGTTGACAGGTAGGGCCTACTGTTTTTTATTTCTACCAT TATCACTTACATGTGGGACCGTTTTCTATTTTCAACTCCTTTAATGACTAGGTGCCACGT CAGCACACTTAGATCAAATCAACTTGCCACATCAGCAAAAGCCGGTTCAAAAACCACTAA AGGAGTTAATTTGTACCAGTTTTTAAAGTTGGGGGACATGTTATACCCGGTTTTGAGGTT GAGGGATGTGATTCAACCAAGAGCAAGAGTTGAGGGAGGAAAAATAGACTTATTTCAAGA TTTTTACAAAATTTATTAAGGAATAAGTTCATTGGAGGTCCCTCAACAAAATTTAATTTT TTTTACAAATTTTACAAATTAGGATTTTTTGAGTTTACTTAACCATAAAACGAGAAATGT ATACCTCTAAACTCATACAAACCGTACAATCAAGGTCCTATAGCAGTATATATAGGTGGC TTGACTGACGTGGCATTCTAGTCGAGAAAAAAAAGTCCACATGT



consensusID : consensus_9535#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 808
fasta sequence
                              [TGCGTGCCTTGAGCAGCTCGATTGCCGGTCACGCCCGGGGAGAGGTGTCGTCGGCCGGCCACGCGGCGGGGAAGGAGCTCCCCAACTGGCGCCGCGCAGGGAGATGATTTCCCAGCTAGCCGCGCACGCGAAGAGGAGTCGTCGGCCGGCCACCGTGATCCCCCTCGGCCGTGGTACCGTTTGCAGCGCCCAAGCACGTGGCTGTCCACCCCAGACCTACCAGAGAAAGAGATAAGGAAGAAGAGAAGGTTAAGATGGTTGACAGCCGGCGGCTGGCGGCAGATGGCCCGGCCACTGCCCACTCCACTCCGCCGGCCATACGCTCACCCGCCGCCGTCCGCCACGTGCTCGCCCGCTTGCTCCAGCCGCACGCCGCCGCTCCGCTCCGCCGACCGCGCGCTCGCCCGCCGCTTGCTCTTGTTTCAGGATGGAGAATCGATGGCGATGACATTCCGATGGAAACACATAGTAGCTTAAAGCCTTGTCTTCAGATGGTGATCCTTGACCCTTCACTTTGAGGTCAATCTCAAATAAGGGGTTATCCAATAGAAGAATTGCACGGCTAGGACCTGAGAAGGTGAAGAAGCAGATCCTCGGACACCTCACTCCCCTTCCCAACCGGCAAACCCTACTTTTCCGGCGGCGGCGGCGGTGATGGAGTCCGGCCAGTCTGGTGACGGGGCTAGCCACGGCCACACGAGTACGGTGGTGGAGACTGCCAAGGAGGAAGCGCTCGCCGGCGGCTACGATGAGGAGGAGGACTGCACACCGCTACCTAATGGGCTCATATGCTCGCGGCAGAATTGGG]

[+] EMBL CB634908             [TGCGTGCCTTGAGCAGCTCGATTGCCGGTCACGCCCGGGGAGAGGTGTCGTCGGCCGGCCACGCGGCGGGGAAGGAGCTCCCCAACTGGCGCCGCGCAGGGAGATGATTTCCCAGCTAGCCGCGCACGCGAAGAGGAGTCGTCGGCCGGCCACCGTGATCCCCCTCGGCCGTGGTACCGTTTGCAGCGCCCAAGCACGTGGCTGTCCACCCCAGACCTACCAGAGAAAGAGATAAGGAAGAAGAGAAGGTTAAGATGGTTGACAGCCGGCGGCTGGCGGCAGATGGCCCGGCCACTGCCCACTCCACTCCGCCGGCCATACGCTCACCCGCCGCCGTCCGCCACGTGCTCGCCCGCTTGCTCCAGCCGCACGCCGCCGCTCCGCTCCGCCGACCGCGCGCTCGCCCGCCGCTTGCTCTTGTTTCAGGATGGAGAATCGATGGCGATGACATTCCGATGGAAACACATAGTAGCTTAAAGCCTTGTCTTCAGATGGTGATCCTTGACCCTTCACTTTGAGGTCAATCTCAAATAAGGGGTTATCCAATAGAAGAATTGCACGGCTAGGACCTGAGAAGGTGAAGAAGCAGATCCTCGGACACCTCACTCCCCTTCCCAACCGGCAAACCCTACTTTTCCGGCGGCGGCGGCGGTGATGGAGTCCGGCCAGTCTGGTGACGGGGCTAGCCACGGCCACACGAGTACGGTGGTGGAGACTGCCAAGGAGGAAGCGCTCGCCGGCGGCTACGATGAGGAGGAGGACTGCACACCGCTACCTAATGGGCTCATATGCTCGCGGCAGAATTGGG]


>consensus_9535#1 TGCGTGCCTTGAGCAGCTCGATTGCCGGTCACGCCCGGGGAGAGGTGTCGTCGGCCGGCC ACGCGGCGGGGAAGGAGCTCCCCAACTGGCGCCGCGCAGGGAGATGATTTCCCAGCTAGC CGCGCACGCGAAGAGGAGTCGTCGGCCGGCCACCGTGATCCCCCTCGGCCGTGGTACCGT TTGCAGCGCCCAAGCACGTGGCTGTCCACCCCAGACCTACCAGAGAAAGAGATAAGGAAG AAGAGAAGGTTAAGATGGTTGACAGCCGGCGGCTGGCGGCAGATGGCCCGGCCACTGCCC ACTCCACTCCGCCGGCCATACGCTCACCCGCCGCCGTCCGCCACGTGCTCGCCCGCTTGC TCCAGCCGCACGCCGCCGCTCCGCTCCGCCGACCGCGCGCTCGCCCGCCGCTTGCTCTTG TTTCAGGATGGAGAATCGATGGCGATGACATTCCGATGGAAACACATAGTAGCTTAAAGC CTTGTCTTCAGATGGTGATCCTTGACCCTTCACTTTGAGGTCAATCTCAAATAAGGGGTT ATCCAATAGAAGAATTGCACGGCTAGGACCTGAGAAGGTGAAGAAGCAGATCCTCGGACA CCTCACTCCCCTTCCCAACCGGCAAACCCTACTTTTCCGGCGGCGGCGGCGGTGATGGAG TCCGGCCAGTCTGGTGACGGGGCTAGCCACGGCCACACGAGTACGGTGGTGGAGACTGCC AAGGAGGAAGCGCTCGCCGGCGGCTACGATGAGGAGGAGGACTGCACACCGCTACCTAAT GGGCTCATATGCTCGCGGCAGAATTGGG



consensusID : consensus_9535#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 727
fasta sequence
                              [GTGCTGAGGAGGAGGTCCCGGCCGGCCACGCGCGGGAGAGGAGCTCGCTGGCCAGCCGTGCACGGGGAGATAGTTGTTGGCCAACCATGCGTGGGGGGAGCAGCTCGATTGCCGGTCACGCCCGGGGAGAGGTGTCGTCGGCCGGCCACGCGGCGGGGAAGGAGCTCGCCAACTGGCGCCGCGCAGGGAGATGATTTCCCAGCTAGCCGCGCACGCGAAGAGGAGTCGTCGGCCGGCCACCGTGATCCCCCTCGGCCGTGGTACCGTTTGCAGCGCCCAAGCACGTGGCTGTCCACCCCAGACCTACCAGAGAAAGAGATAAGGAAGAAGAGAAGGTTAAGATGGTTGACAGATGGAGAATCGATGGCGATGACATTCCGATGGAAACACATAGTAGCTTAAAGCCTTGTCTTCAGATGGTGATCCTTGACCCTTCACTTTGAGGTCAATCTCAAATAAGGGGTTATCCAATAGAAGAATTGCACGGCTAGGACCTGAGAAGGTGAAGAAGCAGATCCTCGGACACCTCACTCCCCTTCCCAACCGGCAAACCCTACTTTTCCNGCGGCGGCGGCGGTGATGGAGTCCGGCCAGTCTGGTGACGGGGCTAGCCACGGCCACACGAGTACGGTGGTGGAGACTGCCAAGGAGGAAGCGCTCGCCGGCGGCTACGATGAGGAGGAGGAAGACTGCACACCGCTACCTAATGGGCTCATATGCTCGCGGC]

[+] EMBL CB636944             [GTGCTGAGGAGGAGGTCCCGGCCGGCCACGCGCGGGAGAGGAGCTCGCTGGCCAGCCGTGCACGGGGAGATAGTTGTTGGCCAACCATGCGTGGGGGGAGCAGCTCGATTGCCGGTCACGCCCGGGGAGAGGTGTCGTCGGCCGGCCACGCGGCGGGGAAGGAGCTCGCCAACTGGCGCCGCGCAGGGAGATGATTTCCCAGCTAGCCGCGCACGCGAAGAGGAGTCGTCGGCCGGCCACCGTGATCCCCCTCGGCCGTGGTACCGTTTGCAGCGCCCAAGCACGTGGCTGTCCACCCCAGACCTACCAGAGAAAGAGATAAGGAAGAAGAGAAGGTTAAGATGGTTGACAGATGGAGAATCGATGGCGATGACATTCCGATGGAAACACATAGTAGCTTAAAGCCTTGTCTTCAGATGGTGATCCTTGACCCTTCACTTTGAGGTCAATCTCAAATAAGGGGTTATCCAATAGAAGAATTGCACGGCTAGGACCTGAGAAGGTGAAGAAGCAGATCCTCGGACACCTCACTCCCCTTCCCAACCGGCAAACCCTACTTTTCCNGCGGCGG                                                                                                                                                            ]
[+] EMBL CB641000             [                                                                                                                CGGTCACGCCCGGGGAGAGGTGTCGTCGGCCGGCCACGCGGCGGGGAAGGAGCTCGCCAACTGGCGCCGCGCAGGGAGATGATTTCCCAGCTAGCCGCGCACGCGAAGAGGAGTCGTCGGCCGGCCACCGTGATCCCCCTCGGCCGTGGTACCGTTTGCAGCGCCCAAGCACGTGGCTGTCCACCCCAGACCTACCAGAGAAAGAGATAAGGAAGAAGAGAAGGTTAAGATGGTTGACAGATGGAGAATCGATGGCGATGACATTCCGATGGAAACACATAGTAGCTTAAAGCCTTGTCTTCAGATGGTGATCCTTGACCCTTCACTTTGAGGTCAATCTCAAATAAGGGGTTATCCAATAGAAGAATTGCACGGCTAGGACCTGAGAAGGTGAAGAAGCAGATCCTCGGACACCTCACTCCCCTTCCCAACCGGCAAACCCTACTTTTCCGGCGGCGGCGGCGGTGATGGAGTCCGGCCAGTCTGGTGACGGGGCTAGCCACGGCCACACGAGTACGGTGGTGGAGACTGCCAAGGAGGAAGCGCTCGCCGGCGGCTACGATGAGGAGGAGGAAGACTGCACACCGCTACCTAATGGGCTCATATGCTCGCGGC]


>consensus_9535#2 GTGCTGAGGAGGAGGTCCCGGCCGGCCACGCGCGGGAGAGGAGCTCGCTGGCCAGCCGTG CACGGGGAGATAGTTGTTGGCCAACCATGCGTGGGGGGAGCAGCTCGATTGCCGGTCACG CCCGGGGAGAGGTGTCGTCGGCCGGCCACGCGGCGGGGAAGGAGCTCGCCAACTGGCGCC GCGCAGGGAGATGATTTCCCAGCTAGCCGCGCACGCGAAGAGGAGTCGTCGGCCGGCCAC CGTGATCCCCCTCGGCCGTGGTACCGTTTGCAGCGCCCAAGCACGTGGCTGTCCACCCCA GACCTACCAGAGAAAGAGATAAGGAAGAAGAGAAGGTTAAGATGGTTGACAGATGGAGAA TCGATGGCGATGACATTCCGATGGAAACACATAGTAGCTTAAAGCCTTGTCTTCAGATGG TGATCCTTGACCCTTCACTTTGAGGTCAATCTCAAATAAGGGGTTATCCAATAGAAGAAT TGCACGGCTAGGACCTGAGAAGGTGAAGAAGCAGATCCTCGGACACCTCACTCCCCTTCC CAACCGGCAAACCCTACTTTTCCNGCGGCGGCGGCGGTGATGGAGTCCGGCCAGTCTGGT GACGGGGCTAGCCACGGCCACACGAGTACGGTGGTGGAGACTGCCAAGGAGGAAGCGCTC GCCGGCGGCTACGATGAGGAGGAGGAAGACTGCACACCGCTACCTAATGGGCTCATATGC TCGCGGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9535#1      ------------------------------------------------------------
consensus_9535#2      ------------------------------------------------------------
consensus_9535#0      TCTCACCTTCCATCAGCAATAGACCGGGCGGCGGCGACGGTACCAAGCTTTGCGGCGCGA 60
                                                                                  

consensus_9535#1      ------------------------------------------------------------
consensus_9535#2      ------------------------------------------------------------
consensus_9535#0      GGGAGAGGAGCTTGCCAGACAGCCGCACATGGAAGGAGGAGCTCGTCGGCCGGTCGTGCC 120
                                                                                  

consensus_9535#1      ------------------------------------------------------------
consensus_9535#2      ------------------------------------------------------------
consensus_9535#0      CGTGGAGAGGACCTGGCCGGCAGGGGTGCACATGAGGAGGAGATCGCAACCGTACGTTCG 180
                                                                                  

consensus_9535#1      ------------------------------------------------------------
consensus_9535#2      ------------------------------------------------------------
consensus_9535#0      CACACATGAAGGAGCTCCCAGCGAGTCGTGCGTGGGGAGAAGAGTCGTCGGCTGGCCATG 240
                                                                                  

consensus_9535#1      ------------------------------------------------------------
consensus_9535#2      ------------------------------------------------------------
consensus_9535#0      CGCAGGGAAGGAGCTTGCCATCCAGCACCGCGCGGGGAGAGAAGCTCCCGGCCGGCCGTG 300
                                                                                  

consensus_9535#1      ------------------------------------------------------------
consensus_9535#2      ------------------------------------------------------------
consensus_9535#0      CATATGGAGAGGAGTCGTTGACCGGTTGCGCGCGGCGGAGTTGCTCGCCCGCCGGCCACA 360
                                                                                  

consensus_9535#1      ------------------------------------------------------------
consensus_9535#2      --------------------------------------GTGCTGAGGAGGAGGTCCCGGC 22
consensus_9535#0      CGGGGGTGGGGAGGGGGGGGAGCTCGCCGACCGGCCGTGTGCTGAGGAGGAGGTCCCGGC 420
                                                                                  

consensus_9535#1      ------------------------------------------------------------
consensus_9535#2      CGGCCACGCGCGGGAGAGGAGCTCGCTGGCCAGCCGTGCACGGGGAGATAGTTGTTGGCC 82
consensus_9535#0      CGGCCACGCGCGGGAGAGGAGCTCGCTGGCCAGCCGTGCACGGGGAGATAGTTGTTGGCC 480
                                                                                  

consensus_9535#1      -----TGCGTGCCTTGAGCAGCTCGATTGCCGGTCACGCCCGGGGAGAGGTGTCGTCGGC 55
consensus_9535#2      AACCATGCGTGGGGGGAGCAGCTCGATTGCCGGTCACGCCCGGGGAGAGGTGTCGTCGGC 142
consensus_9535#0      AACCATGCGTGGGGGGAGCAGCTCGATTGCCGGTCACGCCCGGGGAGAGGTGTCGTCGGC 540
                           ******    *********************************************

consensus_9535#1      CGGCCACGCGGCGGGGAAGGAGCTCCCCAACTGGCGCCGCGCAGGGAGATGATTTCCCAG 115
consensus_9535#2      CGGCCACGCGGCGGGGAAGGAGCTCGCCAACTGGCGCCGCGCAGGGAGATGATTTCCCAG 202
consensus_9535#0      CGGCCACGCGGCGGGGAAGGAGCTCGCCAACTGGCGCCGCGCAGGGAGATGATTTCCCAG 600
                      ************************* **********************************

consensus_9535#1      CTAGCCGCGCACGCGAAGAGGAGTCGTCGGCCGGCCACCGTGATCCCCCTCGGCCGTGGT 175
consensus_9535#2      CTAGCCGCGCACGCGAAGAGGAGTCGTCGGCCGGCCACCGTGATCCCCCTCGGCCGTGGT 262
consensus_9535#0      CTAGCCGCGCACGCGAAGAGGAGTCGTCGGCCGGCCACCGTGATCCCCCTCGGCCGTGGT 660
                      ************************************************************

consensus_9535#1      ACCGTTTGCAGCGCCCAAGCACGTGGCTGTCCACCCCAGACCTACCAGAGAAAGAGATAA 235
consensus_9535#2      ACCGTTTGCAGCGCCCAAGCACGTGGCTGTCCACCCCAGACCTACCAGAGAAAGAGATAA 322
consensus_9535#0      ACCGTTTGCAGCGCCCAAGCACGTGGCTGTCCACCCCAGACCTACCAGAGAAAGAGATAA 720
                      ************************************************************

consensus_9535#1      GGAAGAAGAGAAGGTTAAGATGGTTGACAGCCGGCGGCTGGCGGCAGATGGCCCGGCCAC 295
consensus_9535#2      GGAAGAAGAGAAGGTTAAGATGGTTGACAG------------------------------ 352
consensus_9535#0      GGAAGAAGAGAAGGTTAAGATGGTTGACAGGTAGGGCCTACTGTTTTTTATTTCTACCAT 780
                      ******************************                              

consensus_9535#1      TGCCCACTCCACTCCGCCGGCCATACGCTCACCCGCCGCCGTCCGCCACGTGCTCGCCCG 355
consensus_9535#2      ------------------------------------------------------------
consensus_9535#0      TATC--------------------ACTTACATGTGGGACCGTTTTCTATTT------TCA 814
                                                                                  

consensus_9535#1      CTTGCTCCAGCCGCACGCCGCCGCTCCGCTCCGCCGACCGCGCGCTCGCCCGCCGCTTGC 415
consensus_9535#2      ------------------------------------------------------------
consensus_9535#0      ACTCCTTTAATGACTAGGTGCCACGTCAGCACACTTAGATCAAATCAACTTGCCACAT-C 873
                                                                                  

consensus_9535#1      TCTTGTTTCAGGATGGAGAATCGATGGCGATGACATTCCGATGGAAACACATAGTAGCTT 475
consensus_9535#2      ------------ATGGAGAATCGATGGCGATGACATTCCGATGGAAACACATAGTAGCTT 400
consensus_9535#0      AGCAAAAGCCGGTTCAAAAACCACTAAAGGAGTTAATTTG-TACCAGTTTTTAA-AGTTG 931
                                   *  * ** *  *   *  *  * *  * *   *     **  ** * 

consensus_9535#1      AAAGCCTTGTCTT--CAGATGGTGATCCTTGACCCTTCACTTTGAGGTCAATCTCAAATA 533
consensus_9535#2      AAAGCCTTGTCTT--CAGATGGTGATCCTTGACCCTTCACTTTGAGGTCAATCTCAAATA 458
consensus_9535#0      GGGGACATGTTATACCCGGTTTTGAGGTTGAGGGATGTGATTCAACCAAGAGCAAGAGTT 991
                         * * ***  *  * * *  ***   *      *    **  *     * *   * * 

consensus_9535#1      AGGGGTTATCCAATAGAAGAATTGCACGGCTAGGACCTGAGAAGGTGAAGAAGCAGATCC 593
consensus_9535#2      AGGGGTTATCCAATAGAAGAATTGCACGGCTAGGACCTGAGAAGGTGAAGAAGCAGATCC 518
consensus_9535#0      GAGGGAGGAAAAATAGACTTATTTCAAGATTTTTACAAAATTTATTAAGGAATAAGTTCA 1051
                        ***      ******   *** ** *  *   **   *     * * ***  ** ** 

consensus_9535#1      TCGGACACCTCACTCCCCTTCCCAACCGGCAAACCCTACTTTTCCGGCGGCGGCGGCGGT 653
consensus_9535#2      TCGGACACCTCACTCCCCTTCCCAACCGGCAAACCCTACTTTTCCNGCGGCGGCGGCGGT 578
consensus_9535#0      TTGGAGGTCCCTCAACAAAATTTAATTTTTTTTACAAATTTTACAAATTAGGAT-----T 1106
                      * ***   * * *  *       **         *  * *** *       *       *

consensus_9535#1      GATGGAGTCCGGCCAGTCTGGTGACGGGGCTAGC-CACGGCCACACGAGTACGG-TGGTG 711
consensus_9535#2      GATGGAGTCCGGCCAGTCTGGTGACGGGGCTAGC-CACGGCCACACGAGTACGG-TGGTG 636
consensus_9535#0      TTTTGAGTTTACTTAACCATAAAACGAGAAATGTATACCTCTAAACTCATACAAACCGTA 1166
                        * ****      *  *     *** *    *   **  * * **   ***     ** 

consensus_9535#1      GAGACT-GCCAAGGAGGAAGCGCTCGCCGGCGGCTACGATGAGGAGGAGGA---CTGCAC 767
consensus_9535#2      GAGACT-GCCAAGGAGGAAGCGCTCGCCGGCGGCTACGATGAGGAGGAGGAAGACTGCAC 695
consensus_9535#0      CAATCAAGGTCCTATAGCAGTATATATAGGTGGCTTGACTGACGTGGCA------TTCTA 1220
                       *  *  *        * **        ** ****    *** * **        * *  

consensus_9535#1      ACCGCTACCTAATGGGCTCATATGCTCGCGGCAGAATTGGG 808
consensus_9535#2      ACCGCTACCTAATGGGCTCATATGCTCGCGGC--------- 727
consensus_9535#0      GTCGAGAAAAAA-AAGTCCACATGT---------------- 1244
                        **  *   **   *  ** ***                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)