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Oryza sativa
cluster # 9648 cluster # 9648       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9648#0 length = 2223 sequences # 4  
consensus_9648#1 length = 534 sequences # 1  
consensus_9648#2 length = 453 sequences # 1  

consensusID : consensus_9648#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2223
fasta sequence
                              [ATTAACTATCATCACTGTGGGGCTTCAAAAACGTGGTATGGCTTTCCAGGCAAAGCTGCTCCGGATTTTGAGAAAGTGGTATGTGAGCATGTGTACGATCATGAAATTTTATCAGGTGAAGGGGAAAATGCAGCATTTGATGTCATTTTGGGAAAGACTACAATGTTTCCTCCAAATATTCTGTTGCGTCATCATGTTCCTGTCTACAGAGCTATACAGAAACCTGGAGAGTTTGTTATTACGTTTCCCCGAGCTTATCATTCAGGTTTCAGCCATGGTTTTAATTGTGGCGAGGCAGTGAATTTCGCTATTGGAGAATGGTTTCCTCTGGGAGCACTTGCTAGTCAACGTTATGCACTTTTAAAGAGGACACCATTACTACCTTACGAGGAACTTCTTTGTAAAGAGGCGGCACTTCTTGATCATGAATTTTCTACCTGTGATTATAAAGATACAACAACATTAGCTGGAGAAACACACAGTCAACGCTGTATGAAAGTTCCTTTTGTTCAGTTGATGAGGGTCCAACATCGTATCCGTTGGTCCCTTATGAAAATGGGTGCTCGCACGCATTATAAAGCAGATATTGATGCCACAGTTCTGTGTGGAATATGTAGACGCGACTGCTACGTAGCCCACATTATGTGTAACTGCAGAATTGATGCGATTTGCCTTTGCCATGAGGAAGAGATTAAGAGATGCCCTTGCAGTTGTGATCGTGTTGTATTTGTGAGGAAAGACATATTTGAACTGGAGACATTATCAAAGAAGTTCGAGGAGGAAAGTGGAATACTGGATGCAGTCAAAAAGCAAATGGCTCGACGTGATGGCGCTAGTCAGCATTCTAACTTTTTCGATTGTACTGATCATGAAGCTGAGTACTACCCATACTGCAATATTCACATAGATCCATCCCCAGAAATATATAGCATTTCAGAGACAAATTTTGTTGGGTATGACTTGAACAATCCACATCCTGCTGCATCAACAGTAACATTTTCTTTTGTACCCCATGAGTATTCTACACAAAGTGATGAGTGTACAAGTTCTAACAGAAGAGCCTTGTCTAGCTCTTGTCTCGAGAATACAATTACCCCTGAAAATGCAATTAGTAATGCTTGCCAGTTATCTACTCCTGATCAAACATGTCTGTCTGACAAATTGGCTGCACATGATACTGATGATTCTGACTGTGAGATATTTAGAGTAAAGAGAAGATCTGGCCTAACTCCTGAGAAAAGACACATGGAAGATGGAACAACAAATTTCACTGGGAATCAGGTATTGAAACGGCTGAAGAAAATTAATGCACATGACAGACAAGAACATAAGTTACCTGAACTATCCTGTGGTGCAAGGAGTGAACCTGTCCATACTGATGATTGTATACATTGTGTTGACTTCATTTCTGAAGATGGAGACGACTTCATAGCTCCAACCAAATTGAAGATGATACATCAACTAGATGCAAATATTGTTGAGGATGAAGTTGCTTCCAGCCAGAAATATAATAGTTGCAACTACCAATCTCCATCTATAGAGCTTGGGCCAAAACGCTTGAAAATTCGTGGCCCATCTTTTCCCAGCAGGATTTCTGAGCTGGAGGTATCTTGTAGATTCCAGGACAATGACTTGGGCAGCCAGCATGCTCGATGACGACTGCTAGGCCATTGGTTCTAACACTACGTAAGTTAACAAACAGCATCCCTAACTTCTGGAAGCTGAAAGCTCCTACCAGCCAAGGTTTCCAAATTGTTGGTTGGTCAGCTGGTAACAGATGGCTCAGATTTAATTCTTCTGCGGGCCTCCAATAGAGGCATTGACATGGGTTCATGGCTGGATTCTTGATTTTATTGCTGGGCCACATTTGTGGTAGGGGGCTGAAAGCAGTAGGCAGACAATTCTGATGTTTTTCCACTGTACATCTTCACATACATCTCCTTTCACCTTTCTCGTAGGTTTTTCACTGTGAAGAGGTTAGTCTACTACCTTACCAATTTCTTTCATTCTTTTTGCACACATACACATGTACCTAGAATGCTTAATCAGATGCAAATATGGAATTGATACTGTAGATCCCATATTGAGTCAGTTATTCAACTTTCTACTGGTCTTTGATCTCTTCATGTAATCTCAAATGATCAAATTTCTTTTGTCATTATTGGTACCGGTACATTTGTCTCCAGATGTGTTGATAACTTGACTTGTTAATAAATCGATTGA]

[+] EMBL CB620292             [ATTAACTATCATCACTGTGGGGCTTCAAAAACGTGGTATGGCTTTCCAGGCAAAGCTGCTCCGGATTTTGAGAAAGTGGTATGTGAGCATGTGTACGATCATGAAATTTTATCAGGTGAAGGGGAAAATGCAGCATTTGATGTCATTTTGGGAAAGACTACAATGTTTCCTCCAAATATTCTGTTGCGTCATCATGTTCCTGTCTACAGAGCTATACAGAAACCTGGAGAGTTTGTTATTACGTTTCCCCGAGCTTATCATTCAGGTTTCAGCCATGGTTTTAATTGTGGCGAGGCAGTGAATTTCGCTATTGGAGAATGGTTTCCTCTGGGAGCACTTGCTAGTCAACGTTATGCACTTTTAAAGAGGACACCATTACTACCTTACGAGGAACTTCTTTGTAAAGAGGCGGCACTTCTTGATCATGAATTTTCTACCTGTGATTATAAAGATACAACAACATTAGCTGGAGAAACACACAGTCAACGCTGTATGAAAGTTCCTTTTGTTCAGTTGATGAGGGTCCAACATCGTATCCGTTGGTCCCTTATGAAAATGGGTGCTCGCACGCATTATAAAGCAGATATTGATGCCACAGTTCTGTGTGGAATATGTAGACGCGACTGCTACGTAGCCCACATTATGTGTAACTGCAGAATTGATGCGATTTGCCTTTGCCATGAGGAAGAGATTAAGAGATGCCCTTGCAGTTGTGATCGTGTTGTATTTGTGAGGAAAGACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF304523             [                                                                                                                                                                             AAATATTCTGTTGCGTCATCATGTTCCTGTCTACAGAGCTATACAGAAACCTGGAGAGTTTGTTATTACGTTTCCCCGAGCTTATCATTCAGGTTTCAGCCATGGTTTTAATTGTGGCGAGGCAGTGAATTTCGCTATTGGAGAATGGTTTCCTCTGGGAGCACTTGCTAGTCAACGTTATGCACTTTTAAAGAGGACACCATTACTACCTTACGAGGAACTTCTTTGTAAAGAGGCGGCACTTCTTGATCATGAATTTTCTACCTGTGATTATAAAGATACAACAACATTAGCTGGAGAAACACACAGTCAACGCTGTATGAAAGTTCCTTTTGTTCAGTTGATGAGGGTCCAACATCGTATCCGTTGGTCCCTTATGAAAATGGGTGCTCGCACGCATTATAAAGCAGATATTGATGCCACAGTTCTGTGTGGAATATGTACACGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK060255             [                                                                                                                                                                                                                                                   TTTCCCCGAGCTTATCATTCAGGTTTCAGCCATGGTTTTAATTGTGGCGAGGCAGTGAATTTCGCTATTGGAGAATGGTTTCCTCTGGGAGCACTTGCTAGTCAACGTTATGCACTTTTAAAGAGGACACCATTACTACCTTACGAGGAACTTCTTTGTAAAGAGGCGGCACTTCTTGATCATGAATTTTCTACCTGTGATTATAAAGATACAACAACATTAGCTGGAGAAACACACAGTCAACGCTGTATGAAAGTTCCTTTTGTTCAGTTGATGAGGGTCCAACATCGTATCCGTTGGTCCCTTATGAAAATGGGTGCTCGCACGCATTATAAAGCAGATATTGATGCCACAGTTCTGTGTGGAATATGTAGACGCGACTGCTACGTAGCCCACATTATGTGTAACTGCAGAATTGATGCGATTTGCCTTTGCCATGAGGAAGAGATTAGGAGATGCCCTTGCAGTTGTGATCGTGTTGTATTTGTGAGGAAAGACATATTTGAACTGGAGACATTATCAAAGAAGTTCGAGGAGGAAAGTGGAATACTGGATGCAGTCAAAAAGCAAATGGCTCGACGTGATGGCGCTAGTCAGCATTCTAACTTTTTCGATTGTACTGATCATGAAGCTGAGTACTACCCATACTGCAATATTCACATAGATCCATCCCCAGAAATATATAGCATTTCAGAGACAAATTTTGTTGGGTATGACTTGAACAATCCACATCCTGCTGCATCAACAGTAACATTTTCTTTTGTACCCCATGAGTATTCTACACAAAGTGATGAGTGTACAAGTTCTAACAGAAGAGCCTTGTCTAGCTCTTGTCTCGAGAATACAATTACCCCTGAAAATGCAATTAGTAATGCTTGCCAGTTATCTACTCCTGATCAAACATGTCTGTCTGACAAATTGGCTGCACATGATACTGATGATTCTGACTGTGAGATATTTAGAGTAAAGAGAAGATCTGGCCTAACTCCTGAGAAAAGACACATGGAAGATGGAACAACAAATTTCACTGGGAATCAGGTATTGAAACGGCTGAAGAAAATTAATGCACATGACAGACAAGAACATAAGTTACCTGAACTATCCTGTGGTGCAAGGAGTGAACCTGTCCATACTGATGATTGTATACATTGTGTTGACTTCATTTCTGAAGATGGAGACGACTTCATAGCTCCAACCAAATTGAAGATGATACATCAACTAGATGCAAATATTGTTGAGGATGAAGTTGCTTCCAGCCAGAAATATAATAGTTGCAACTACCAATCTCCATCTATAGAGCTTGGGCCAAAACGCTTGAAAATTCGTGGCCCATCTTTTCCCAGCAGGATTTCTGAGCTGGAGGTATCTTGTAGATTCCAGGACAATGACTTGGGCAGCCAGCATGCTCGATGACGACTGCTAGGCCATTGGTTCTAACACTACGTAAGTTAACAAACAGCATCCCTAACTTCTGGAAGCTGAAAGCTCCTACCAGCCAAGGTTTCCAAATTGTTGGTTGGTCAGCTGGTAACAGATGGCTCAGATTTAATTCTTCTGCGGGCCTCCAATAGAGGCATTGACATGGGTTCATGGCTGGATTCTTGATTTTATTGCTGGGCCACATTTGTGGTAGGGGGCTGAAAGCAGTAGGCAGACAATTCTGATGTTTTTCCACTGTACATCTTCACATACATCTCCTTTCACCTTTCTCGTAGGTTTTTCACTGTGAAGAGGTTAGTCTACTACCTTACCAATTTCTTTCATTCTTTTTGCACACATACACATGTACCTAGAATGCTTAATCAGATGCAAATATGGAATTGATACTGTAGATCCCATATTGAGTCAGTTATTCAACTTTCTACTGGTCTTTGATCTCTTCATGTAATCTCAAATGATCAAATTTCTTTTGTCATTATTGGTACCGGTACATTTGTCTCCAGATGTGTTGATAACTTGACTTGTTAATAAATCGATTGA]
[+] EMBL AU174710             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGCACATGACAGACAAGAACATAAGTTACCTGAACTATCCTGTGGTGCAAGGAGTGAACCTGTCCATACTGATGATTGTATACATTGTGTTGACTTCATTTCTGAAAATGGAGACGACTTCATAGCTCCAACCAAATTGAAGATGATACATCAACTAGATGCAAATATTGTTGAGGATGAAGTTGCTTCCAGCCAGAAATATAATAGTTGCAACTACCAATCTCCATCTATAGAGCTTGGGCCAAAACGCTTGAAAATTCGTGGCCCATCTTTTCCCAGCAGGATTTCTGAGCTGGAGGTATCTTGTAGATTCCAGGACAATGACTTGGGCAGCCAGCATGCTCGATGACGACTGCTAGGCCATTGGTTCTAACACTACGTAAGTTAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]


>consensus_9648#0 ATTAACTATCATCACTGTGGGGCTTCAAAAACGTGGTATGGCTTTCCAGGCAAAGCTGCT CCGGATTTTGAGAAAGTGGTATGTGAGCATGTGTACGATCATGAAATTTTATCAGGTGAA GGGGAAAATGCAGCATTTGATGTCATTTTGGGAAAGACTACAATGTTTCCTCCAAATATT CTGTTGCGTCATCATGTTCCTGTCTACAGAGCTATACAGAAACCTGGAGAGTTTGTTATT ACGTTTCCCCGAGCTTATCATTCAGGTTTCAGCCATGGTTTTAATTGTGGCGAGGCAGTG AATTTCGCTATTGGAGAATGGTTTCCTCTGGGAGCACTTGCTAGTCAACGTTATGCACTT TTAAAGAGGACACCATTACTACCTTACGAGGAACTTCTTTGTAAAGAGGCGGCACTTCTT GATCATGAATTTTCTACCTGTGATTATAAAGATACAACAACATTAGCTGGAGAAACACAC AGTCAACGCTGTATGAAAGTTCCTTTTGTTCAGTTGATGAGGGTCCAACATCGTATCCGT TGGTCCCTTATGAAAATGGGTGCTCGCACGCATTATAAAGCAGATATTGATGCCACAGTT CTGTGTGGAATATGTAGACGCGACTGCTACGTAGCCCACATTATGTGTAACTGCAGAATT GATGCGATTTGCCTTTGCCATGAGGAAGAGATTAAGAGATGCCCTTGCAGTTGTGATCGT GTTGTATTTGTGAGGAAAGACATATTTGAACTGGAGACATTATCAAAGAAGTTCGAGGAG GAAAGTGGAATACTGGATGCAGTCAAAAAGCAAATGGCTCGACGTGATGGCGCTAGTCAG CATTCTAACTTTTTCGATTGTACTGATCATGAAGCTGAGTACTACCCATACTGCAATATT CACATAGATCCATCCCCAGAAATATATAGCATTTCAGAGACAAATTTTGTTGGGTATGAC TTGAACAATCCACATCCTGCTGCATCAACAGTAACATTTTCTTTTGTACCCCATGAGTAT TCTACACAAAGTGATGAGTGTACAAGTTCTAACAGAAGAGCCTTGTCTAGCTCTTGTCTC GAGAATACAATTACCCCTGAAAATGCAATTAGTAATGCTTGCCAGTTATCTACTCCTGAT CAAACATGTCTGTCTGACAAATTGGCTGCACATGATACTGATGATTCTGACTGTGAGATA TTTAGAGTAAAGAGAAGATCTGGCCTAACTCCTGAGAAAAGACACATGGAAGATGGAACA ACAAATTTCACTGGGAATCAGGTATTGAAACGGCTGAAGAAAATTAATGCACATGACAGA CAAGAACATAAGTTACCTGAACTATCCTGTGGTGCAAGGAGTGAACCTGTCCATACTGAT GATTGTATACATTGTGTTGACTTCATTTCTGAAGATGGAGACGACTTCATAGCTCCAACC AAATTGAAGATGATACATCAACTAGATGCAAATATTGTTGAGGATGAAGTTGCTTCCAGC CAGAAATATAATAGTTGCAACTACCAATCTCCATCTATAGAGCTTGGGCCAAAACGCTTG AAAATTCGTGGCCCATCTTTTCCCAGCAGGATTTCTGAGCTGGAGGTATCTTGTAGATTC CAGGACAATGACTTGGGCAGCCAGCATGCTCGATGACGACTGCTAGGCCATTGGTTCTAA CACTACGTAAGTTAACAAACAGCATCCCTAACTTCTGGAAGCTGAAAGCTCCTACCAGCC AAGGTTTCCAAATTGTTGGTTGGTCAGCTGGTAACAGATGGCTCAGATTTAATTCTTCTG CGGGCCTCCAATAGAGGCATTGACATGGGTTCATGGCTGGATTCTTGATTTTATTGCTGG GCCACATTTGTGGTAGGGGGCTGAAAGCAGTAGGCAGACAATTCTGATGTTTTTCCACTG TACATCTTCACATACATCTCCTTTCACCTTTCTCGTAGGTTTTTCACTGTGAAGAGGTTA GTCTACTACCTTACCAATTTCTTTCATTCTTTTTGCACACATACACATGTACCTAGAATG CTTAATCAGATGCAAATATGGAATTGATACTGTAGATCCCATATTGAGTCAGTTATTCAA CTTTCTACTGGTCTTTGATCTCTTCATGTAATCTCAAATGATCAAATTTCTTTTGTCATT ATTGGTACCGGTACATTTGTCTCCAGATGTGTTGATAACTTGACTTGTTAATAAATCGAT TGA



consensusID : consensus_9648#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 534
fasta sequence
                              [AAATATTCTGTTGCGTCATCATGTTCCTGTCTACAGAGCTATACAGAAACCTGGAGAGTTTGTTATTACGTTTCCCCGAGCTTATCATTCAGGTTTCAGCCATGGTTTTAATTGTGGCGAGGCAGTGAATTTCGCTATTTTATAATGGTTTCCTCTGGGAGCACTTGCTAGTCAACGTTATGCACTTTTAAAGAGGACACCATTACTACCTTACGAGGAACTTCTTTGTAAAGAGGCGGCACTTCTTGATCATGAATTTTCTACCTGTGATTATAAAGATACAACAACATTAGCTGGAGAAACACACAGTCAACGCTGTATGAAAGTTCCTTTTGTTCAGTTGATGAGGGTCCAACATCGTATCCGTTGGTCCCTTATGAAAATGGGTGCTCGCACGCATTATAAAGCAGATATTGATGCCACAGTTCTGTGTGGAATATGTAGACGCGACTGCTACGTAGCCCACATTATGTGTAACTGCAGAATTGATGCGATTTGCCTTTGCCATGGTAAGATTGTAGTAACACCAAGTGT]

[+] EMBL CF304433             [AAATATTCTGTTGCGTCATCATGTTCCTGTCTACAGAGCTATACAGAAACCTGGAGAGTTTGTTATTACGTTTCCCCGAGCTTATCATTCAGGTTTCAGCCATGGTTTTAATTGTGGCGAGGCAGTGAATTTCGCTATTTTATAATGGTTTCCTCTGGGAGCACTTGCTAGTCAACGTTATGCACTTTTAAAGAGGACACCATTACTACCTTACGAGGAACTTCTTTGTAAAGAGGCGGCACTTCTTGATCATGAATTTTCTACCTGTGATTATAAAGATACAACAACATTAGCTGGAGAAACACACAGTCAACGCTGTATGAAAGTTCCTTTTGTTCAGTTGATGAGGGTCCAACATCGTATCCGTTGGTCCCTTATGAAAATGGGTGCTCGCACGCATTATAAAGCAGATATTGATGCCACAGTTCTGTGTGGAATATGTAGACGCGACTGCTACGTAGCCCACATTATGTGTAACTGCAGAATTGATGCGATTTGCCTTTGCCATGGTAAGATTGTAGTAACACCAAGTGT]


>consensus_9648#1 AAATATTCTGTTGCGTCATCATGTTCCTGTCTACAGAGCTATACAGAAACCTGGAGAGTT TGTTATTACGTTTCCCCGAGCTTATCATTCAGGTTTCAGCCATGGTTTTAATTGTGGCGA GGCAGTGAATTTCGCTATTTTATAATGGTTTCCTCTGGGAGCACTTGCTAGTCAACGTTA TGCACTTTTAAAGAGGACACCATTACTACCTTACGAGGAACTTCTTTGTAAAGAGGCGGC ACTTCTTGATCATGAATTTTCTACCTGTGATTATAAAGATACAACAACATTAGCTGGAGA AACACACAGTCAACGCTGTATGAAAGTTCCTTTTGTTCAGTTGATGAGGGTCCAACATCG TATCCGTTGGTCCCTTATGAAAATGGGTGCTCGCACGCATTATAAAGCAGATATTGATGC CACAGTTCTGTGTGGAATATGTAGACGCGACTGCTACGTAGCCCACATTATGTGTAACTG CAGAATTGATGCGATTTGCCTTTGCCATGGTAAGATTGTAGTAACACCAAGTGT



consensusID : consensus_9648#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 453
fasta sequence
                              [TGACGACTGCTAGGCCATTGGTTCTAACACTACGTAAGTTAACAAACAGCATCCCTAACTTNTGGAAGCTGAAAGCTCCTACCAGCCAAGGTTTCCAAATTGTTGGTTGGTCAGCTGGTAACAGATGGCTCAGATTTAATTNTTNTGCGGGCCTCCAATAGAGGCATTGACATGGGTTCATGGCTGGATTCTTGATTTTATTGCTGGGCCACATTTGTGGTAGGGGGCTGAAAGCAGTAGGCAGACAATTNTGATGTTTTTCCACTGTACATCTTCACATACATCTCCTTTCACCTTTCTCGTAGGTTTTTCACTGTGAAGAGGTTAGTCTACTACCTTACCAATTTCTTTCATTCTTTTTGCACACATACACATGTACCTAGAATGCTTAATCAGATGCAAATATGAAATTGATACTGTAGATCCCATATTGAGTCAGTTAAAAAAAAAAAA]

[+] EMBL AU174709             [TGACGACTGCTAGGCCATTGGTTCTAACACTACGTAAGTTAACAAACAGCATCCCTAACTTNTGGAAGCTGAAAGCTCCTACCAGCCAAGGTTTCCAAATTGTTGGTTGGTCAGCTGGTAACAGATGGCTCAGATTTAATTNTTNTGCGGGCCTCCAATAGAGGCATTGACATGGGTTCATGGCTGGATTCTTGATTTTATTGCTGGGCCACATTTGTGGTAGGGGGCTGAAAGCAGTAGGCAGACAATTNTGATGTTTTTCCACTGTACATCTTCACATACATCTCCTTTCACCTTTCTCGTAGGTTTTTCACTGTGAAGAGGTTAGTCTACTACCTTACCAATTTCTTTCATTCTTTTTGCACACATACACATGTACCTAGAATGCTTAATCAGATGCAAATATGAAATTGATACTGTAGATCCCATATTGAGTCAGTTAAAAAAAAAAAA]


>consensus_9648#2 TGACGACTGCTAGGCCATTGGTTCTAACACTACGTAAGTTAACAAACAGCATCCCTAACT TNTGGAAGCTGAAAGCTCCTACCAGCCAAGGTTTCCAAATTGTTGGTTGGTCAGCTGGTA ACAGATGGCTCAGATTTAATTNTTNTGCGGGCCTCCAATAGAGGCATTGACATGGGTTCA TGGCTGGATTCTTGATTTTATTGCTGGGCCACATTTGTGGTAGGGGGCTGAAAGCAGTAG GCAGACAATTNTGATGTTTTTCCACTGTACATCTTCACATACATCTCCTTTCACCTTTCT CGTAGGTTTTTCACTGTGAAGAGGTTAGTCTACTACCTTACCAATTTCTTTCATTCTTTT TGCACACATACACATGTACCTAGAATGCTTAATCAGATGCAAATATGAAATTGATACTGT AGATCCCATATTGAGTCAGTTAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9648#0      ATTAACTATCATCACTGTGGGGCTTCAAAAACGTGGTATGGCTTTCCAGGCAAAGCTGCT 60
consensus_9648#2      ------------------------------------------------------------
consensus_9648#1      ------------------------------------------------------------
                                                                                  

consensus_9648#0      CCGGATTTTGAGAAAGTGGTATGTGAGCATGTGTACGATCATGAAATTTTATCAGGTGAA 120
consensus_9648#2      ------------------------------------------------------------
consensus_9648#1      ------------------------------------------------------------
                                                                                  

consensus_9648#0      GGGGAAAATGCAGCATTTGATGTCATTTTGGGAAAGACTACAATGTTTCCTCCAAATATT 180
consensus_9648#2      ------------------------------------------------------------
consensus_9648#1      ------------------------------------------------------------
                                                                                  

consensus_9648#0      CTGTTGCGTCATCATGTTCCTGTCTACAGAGCTATACAGAAACCTGGAGAGTTTGTTATT 240
consensus_9648#2      ------------------------------------------------------------
consensus_9648#1      ------------------------------------------------------------
                                                                                  

consensus_9648#0      ACGTTTCCCCGAGCTTATCATTCAGGTTTCAGCCATGGTTTTAATTGTGGCGAGGCAGTG 300
consensus_9648#2      ------------------------------------------------------------
consensus_9648#1      ------------------------------------------------------------
                                                                                  

consensus_9648#0      AATTTCGCTATTGGAGAATGGTTTCCTCTGGGAGCACTTGCTAGTCAACGTTATGCACTT 360
consensus_9648#2      ------------------------------------------------------------
consensus_9648#1      ------------------------------------------------------------
                                                                                  

consensus_9648#0      TTAAAGAGGACACCATTACTACCTTACGAGGAACTTCTTTGTAAAGAGGCGGCACTTCTT 420
consensus_9648#2      ------------------------------------------------------------
consensus_9648#1      ------------------------------------------------------------
                                                                                  

consensus_9648#0      GATCATGAATTTTCTACCTGTGATTATAAAGATACAACAACATTAGCTGGAGAAACACAC 480
consensus_9648#2      ------------------------------------------------------------
consensus_9648#1      ------------------------------------------------------------
                                                                                  

consensus_9648#0      AGTCAACGCTGTATGAAAGTTCCTTTTGTTCAGTTGATGAGGGTCCAACATCGTATCCGT 540
consensus_9648#2      ------------------------------------------------------------
consensus_9648#1      ------------------------------------------------------------
                                                                                  

consensus_9648#0      TGGTCCCTTATGAAAATGGGTGCTCGCACGCATTATAAAGCAGATATTGATGCCACAGTT 600
consensus_9648#2      ------------------------------------------------------------
consensus_9648#1      ------------------------------------------------------------
                                                                                  

consensus_9648#0      CTGTGTGGAATATGTAGACGCGACTGCTACGTAGCCCACATTATGTGTAACTGCAGAATT 660
consensus_9648#2      ------------------------------------------------------------
consensus_9648#1      ------------------------------------------------------------
                                                                                  

consensus_9648#0      GATGCGATTTGCCTTTGCCATGAGGAAGAGATTAAGAGATGCCCTTGCAGTTGTGATCGT 720
consensus_9648#2      ------------------------------------------------------------
consensus_9648#1      ------------------------------------------------------------
                                                                                  

consensus_9648#0      GTTGTATTTGTGAGGAAAGACATATTTGAACTGGAGACATTATCAAAGAAGTTCGAGGAG 780
consensus_9648#2      ------------------------------------------------------------
consensus_9648#1      ------------------------------------------------------------
                                                                                  

consensus_9648#0      GAAAGTGGAATACTGGATGCAGTCAAAAAGCAAATGGCTCGACGTGATGGCGCTAGTCAG 840
consensus_9648#2      ------------------------------------------------------------
consensus_9648#1      ------------------------------------------------------------
                                                                                  

consensus_9648#0      CATTCTAACTTTTTCGATTGTACTGATCATGAAGCTGAGTACTACCCATACTGCAATATT 900
consensus_9648#2      ------------------------------------------------------------
consensus_9648#1      ------------------------------------------------------------
                                                                                  

consensus_9648#0      CACATAGATCCATCCCCAGAAATATATAGCATTTCAGAGACAAATTTTGTTGGGTATGAC 960
consensus_9648#2      ------------------------------------------------------------
consensus_9648#1      ------------------------------------------------------------
                                                                                  

consensus_9648#0      TTGAACAATCCACATCCTGCTGCATCAACAGTAACATTTTCTTTTGTACCCCATGAGTAT 1020
consensus_9648#2      ------------------------------------------------------------
consensus_9648#1      ------------------------------------------------------------
                                                                                  

consensus_9648#0      TCTACACAAAGTGATGAGTGTACAAGTTCTAACAGAAGAGCCTTGTCTAGCTCTTGTCTC 1080
consensus_9648#2      ------------------------------------------------------------
consensus_9648#1      ------------------------------------------------------------
                                                                                  

consensus_9648#0      GAGAATACAATTACCCCTGAAAATGCAATTAGTAATGCTTGCCAGTTATCTACTCCTGAT 1140
consensus_9648#2      ------------------------------------------------------------
consensus_9648#1      ------------------------------------------------------------
                                                                                  

consensus_9648#0      CAAACATGTCTGTCTGACAAATTGGCTGCACATGATACTGATGATTCTGACTGTGAGATA 1200
consensus_9648#2      ------------------------------------------------------------
consensus_9648#1      ------------------------------------------------------------
                                                                                  

consensus_9648#0      TTTAGAGTAAAGAGAAGATCTGGCCTAACTCCTGAGAAAAGACACATGGAAGATGGAACA 1260
consensus_9648#2      ------------------------------------------------------------
consensus_9648#1      ------------------------------------------------------------
                                                                                  

consensus_9648#0      ACAAATTTCACTGGGAATCAGGTATTGAAACGGCTGAAGAAAATTAATGCACATGACAGA 1320
consensus_9648#2      ------------------------------------------------------------
consensus_9648#1      ------------------------------------------------------------
                                                                                  

consensus_9648#0      CAAGAACATAAGTTACCTGAACTATCCTGTGGTGCAAGGAGTGAACCTGTCCATACTGAT 1380
consensus_9648#2      ------------------------------------------------------------
consensus_9648#1      ------------------------------------------------------------
                                                                                  

consensus_9648#0      GATTGTATACATTGTGTTGACTTCATTTCTGAAGATGGAGACGACTTCATAGCTCCAACC 1440
consensus_9648#2      ------------------------------------------------------------
consensus_9648#1      ------------------------------------------------------------
                                                                                  

consensus_9648#0      AAATTGAAGATGATACATCAACTAGATGCAAATATTGTTGAGGATGAAGTTGCTTCCAGC 1500
consensus_9648#2      ------------------------------------------------------------
consensus_9648#1      ------------------------------------------------------------
                                                                                  

consensus_9648#0      CAGAAATATAATAGTTGCAACTACCAATCTCCATCTATAGAGCTTGGGCCAAAACGCTTG 1560
consensus_9648#2      ------------------------------------------------------------
consensus_9648#1      ------------------------------------------------------------
                                                                                  

consensus_9648#0      AAAATTCGTGGCCCATCTTTTCCCAGCAGGATTTCTGAGCTGGAGGTATCTTGTAGATTC 1620
consensus_9648#2      ------------------------------------------------------------
consensus_9648#1      ------------------------------------------------------------
                                                                                  

consensus_9648#0      CAGGACAATGACTTGGGCAGCCAGCATGCTCGATGACG-ACTGCTAGGCCATTGGTTCTA 1679
consensus_9648#2      ---------------------------------TGACG-ACTGCTAGGCCATTGGTTCTA 26
consensus_9648#1      -------------------------AAATATTCTGTTGCGTCATCATGTTCCTGTCTACA 35
                                                       **  *       * *    **  *  *

consensus_9648#0      ACACTACGTAAGTTAACAAACAGC--ATCCCTA-ACTTCTGGAAGCTGAAAGCTCC--TA 1734
consensus_9648#2      ACACTACGTAAGTTAACAAACAGC--ATCCCTA-ACTTNTGGAAGCTGAAAGCTCC--TA 81
consensus_9648#1      GAGCTATACAGAAACCTGGAGAGTTTGTTATTACGTTTCCCCGAGCTTATCATTCAGGTT 95
                         ***   *         * **    *   **   **     **** *    **   * 

consensus_9648#0      CCAGCCAAGGTTTCCAAATTGTTGGTTGGTCAGCTGGTAACAGATGGCTCAGATTTAATT 1794
consensus_9648#2      CCAGCCAAGGTTTCCAAATTGTTGGTTGGTCAGCTGGTAACAGATGGCTCAGATTTAATT 141
consensus_9648#1      TCAGCCATGGTTTT--AATTGT-GGCGAGGCAGTGAATTTC-GCTATTTTATAATGGTTT 151
                       ****** *****   ****** **   * ***    *  * * *   * * * *   **

consensus_9648#0      CTTCTGCGGGCCTCCAATAGAGGCATTGACATGGGTTCATGGCTGGATTCTTGATTTTAT 1854
consensus_9648#2      NTTNTGCGGGCCTCCAATAGAGGCATTGACATGGGTTCATGGCTGGATTCTTGATTTTAT 201
consensus_9648#1      CCTCTGGGAGCACTTGCTAGTCAACGTTATGCACTTTTAAAGAGGACACCATTACTACCT 211
                        * ** * **      ***      * *      ** *  *  *    * * * *   *

consensus_9648#0      TGCTGGGCCACATTTGTGGTAGGGGGCTGAAAGCAGTAGGCAGACAATTCTGA--TGTTT 1912
consensus_9648#2      TGCTGGGCCACATTTGTGGTAGGGGGCTGAAAGCAGTAGGCAGACAATTNTGA--TGTTT 259
consensus_9648#1      TACGAGGA-ACTTCTTTGTAAAGAGGCGGCACTTCTTGATCATGAATTTTCTACCTGTGA 270
                      * *  **  ** * * **  * * *** * *     *   **   * **   *  ***  

consensus_9648#0      TTCCACTG-TACATCTTCAC-------ATACATCTCCTTTCACCTTTCT-CGTAGGTT-- 1961
consensus_9648#2      TTCCACTG-TACATCTTCAC-------ATACATCTCCTTTCACCTTTCT-CGTAGGTT-- 308
consensus_9648#1      TTATAAAGATACAACAACATTAGCTGGAGAAACACACAGTCAACGCTGTATGAAAGTTCC 330
                      **  *  * **** *  **        * * *    *  *** *  * *  * * ***  

consensus_9648#0      TTTCACTGTGAAGAGGTTAGTCTACTACCTTACCAATT--TCTTTCATTC-------TTT 2012
consensus_9648#2      TTTCACTGTGAAGAGGTTAGTCTACTACCTTACCAATT--TCTTTCATTC-------TTT 359
consensus_9648#1      TTTTGTTCAGTTGATGAGGGTCCAACATCGTATCCGTTGGTCCCTTATGAAAATGGGTGC 390
                      ***   *  *  ** *   *** *  * * ** *  **  **  * **         *  

consensus_9648#0      TTGCACACAT----ACACATGTAC-----CTAGAATGCTTAATCAGATGCAAATATGGAA 2063
consensus_9648#2      TTGCACACAT----ACACATGTAC-----CTAGAATGCTTAATCAGATGCAAATATGAAA 410
consensus_9648#1      TCGCACGCATTATAAAGCAGATATTGATGCCACAGTTCTGTGTGGAATATGTAGACGCGA 450
                      * **** ***    *  **  **      * * * * **   *   **    * * *  *

consensus_9648#0      TTGATACTGTAGATCCCATATTGAGTCAGTTATTCAACTTTCTACTGGTCTTTGATCTCT 2123
consensus_9648#2      TTGATACTGTAGATCCCATATTGAGTCAGTTAAAAAAAAAAAA----------------- 453
consensus_9648#1      CTGCTAC-GTAGCCCACATTATGTGTAACTGCAGAATTGATGCGATTTGCCTTTGCCATG 509
                       ** *** ****  * ***  ** ** * *     *                        

consensus_9648#0      TCATGTAATCTCAAATGATCAAATTTCTTTTGTCATTATTGGTACCGGTACATTTGTCTC 2183
consensus_9648#2      ------------------------------------------------------------
consensus_9648#1      GTAAGATTGTAGTAACACCAAGTGT----------------------------------- 534
                                                                                  

consensus_9648#0      CAGATGTGTTGATAACTTGACTTGTTAATAAATCGATTGA 2223
consensus_9648#2      ----------------------------------------
consensus_9648#1      ----------------------------------------
                                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)